View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2170_low_5 (Length: 341)

Name: NF2170_low_5
Description: NF2170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2170_low_5
NF2170_low_5
[»] chr3 (48 HSPs)
chr3 (17-276)||(4169039-4169286)
chr3 (44-209)||(42637956-42638121)
chr3 (20-216)||(3823571-3823768)
chr3 (20-216)||(3785882-3786078)
chr3 (26-209)||(19280126-19280306)
chr3 (20-195)||(9710738-9710907)
chr3 (20-216)||(1705663-1705857)
chr3 (36-208)||(44080192-44080364)
chr3 (26-209)||(26308640-26308823)
chr3 (20-166)||(11509823-11509969)
chr3 (57-198)||(5341833-5341974)
chr3 (85-216)||(22432315-22432446)
chr3 (87-209)||(31545603-31545725)
chr3 (50-209)||(19624256-19624414)
chr3 (50-215)||(27707624-27707788)
chr3 (100-216)||(42481300-42481416)
chr3 (36-171)||(23163264-23163400)
chr3 (113-190)||(27335402-27335479)
chr3 (112-200)||(13358101-13358189)
chr3 (19-116)||(31545714-31545811)
chr3 (51-191)||(27079314-27079453)
chr3 (51-191)||(27085111-27085250)
chr3 (51-216)||(34627292-34627453)
chr3 (18-113)||(26308553-26308648)
chr3 (113-190)||(27365008-27365085)
chr3 (20-116)||(3823750-3823845)
chr3 (20-116)||(22432428-22432524)
chr3 (18-117)||(18733572-18733670)
chr3 (18-117)||(27335307-27335406)
chr3 (54-161)||(41571797-41571904)
chr3 (139-201)||(11501309-11501371)
chr3 (20-113)||(19280298-19280391)
chr3 (113-190)||(27326047-27326124)
chr3 (113-190)||(27332284-27332361)
chr3 (27-94)||(5341996-5342063)
chr3 (125-200)||(39126189-39126263)
chr3 (20-116)||(3786060-3786153)
chr3 (36-113)||(27040683-27040760)
chr3 (67-116)||(34164326-34164375)
chr3 (36-103)||(11501244-11501310)
chr3 (131-181)||(23163787-23163837)
chr3 (50-116)||(39126263-39126329)
chr3 (44-117)||(33488333-33488406)
chr3 (38-94)||(13358996-13359052)
chr3 (155-193)||(11509989-11510027)
chr3 (28-77)||(1705593-1705642)
chr3 (244-319)||(3823797-3823869)
chr3 (52-116)||(18733430-18733495)
[»] chr2 (13 HSPs)
chr2 (35-214)||(43900463-43900642)
chr2 (18-209)||(30906051-30906242)
chr2 (20-201)||(45305887-45306067)
chr2 (81-317)||(1400667-1400901)
chr2 (86-216)||(28527316-28527445)
chr2 (113-289)||(33667328-33667506)
chr2 (20-116)||(1400689-1400785)
chr2 (33-216)||(7378463-7378643)
chr2 (26-116)||(28527244-28527334)
chr2 (20-116)||(33667413-33667509)
chr2 (20-94)||(41212426-41212500)
chr2 (20-114)||(30905966-30906060)
chr2 (136-190)||(34175155-34175209)
[»] chr4 (30 HSPs)
chr4 (20-188)||(9808994-9809162)
chr4 (20-213)||(17633337-17633530)
chr4 (20-200)||(9810680-9810860)
chr4 (27-216)||(16583523-16583712)
chr4 (20-191)||(55666844-55667013)
chr4 (18-209)||(19596698-19596891)
chr4 (81-216)||(1966826-1966961)
chr4 (34-191)||(8740809-8740966)
chr4 (40-209)||(33179759-33179928)
chr4 (50-191)||(35544438-35544578)
chr4 (38-200)||(2433654-2433811)
chr4 (96-209)||(33249616-33249729)
chr4 (51-207)||(42908520-42908675)
chr4 (26-117)||(24669270-24669361)
chr4 (36-216)||(14351000-14351178)
chr4 (51-190)||(24669123-24669274)
chr4 (28-113)||(1966758-1966841)
chr4 (81-147)||(20874814-20874880)
chr4 (18-116)||(42908666-42908763)
chr4 (36-116)||(14351160-14351240)
chr4 (18-94)||(17633255-17633331)
chr4 (19-92)||(19746939-19747012)
chr4 (19-92)||(19792794-19792867)
chr4 (36-110)||(9810866-9810941)
chr4 (91-129)||(1966978-1967016)
chr4 (36-86)||(25007625-25007675)
chr4 (20-114)||(19596882-19596977)
chr4 (31-113)||(8740715-8740796)
chr4 (36-94)||(9809196-9809254)
chr4 (21-89)||(33249554-33249622)
[»] chr6 (45 HSPs)
chr6 (20-216)||(22608281-22608476)
chr6 (20-200)||(33815025-33815198)
chr6 (39-214)||(10304695-10304870)
chr6 (20-199)||(3222352-3222530)
chr6 (18-209)||(23595072-23595253)
chr6 (104-216)||(138708-138820)
chr6 (104-216)||(146729-146841)
chr6 (51-208)||(3620761-3620917)
chr6 (28-189)||(9474562-9474718)
chr6 (20-116)||(9068503-9068599)
chr6 (105-216)||(9068411-9068521)
chr6 (152-216)||(2430600-2430664)
chr6 (112-207)||(2834974-2835069)
chr6 (18-116)||(7706777-7706876)
chr6 (20-111)||(7915696-7915787)
chr6 (18-116)||(30056039-30056138)
chr6 (20-94)||(23595261-23595335)
chr6 (31-112)||(10304627-10304707)
chr6 (40-116)||(138650-138726)
chr6 (40-116)||(146671-146747)
chr6 (50-138)||(11108147-11108235)
chr6 (60-116)||(2430650-2430706)
chr6 (37-94)||(11108102-11108159)
chr6 (20-89)||(18980401-18980470)
chr6 (20-113)||(24386312-24386405)
chr6 (36-116)||(2835060-2835140)
chr6 (55-110)||(2365649-2365704)
chr6 (20-103)||(9068314-9068395)
chr6 (50-116)||(2430553-2430618)
chr6 (50-111)||(7706935-7706996)
chr6 (247-319)||(2430498-2430568)
chr6 (244-313)||(11108067-11108133)
chr6 (65-116)||(14524091-14524142)
chr6 (19-113)||(22608461-22608558)
chr6 (244-320)||(2835108-2835181)
chr6 (36-114)||(3222532-3222610)
chr6 (35-89)||(20084729-20084783)
chr6 (67-116)||(15341435-15341484)
chr6 (67-116)||(15341858-15341907)
chr6 (20-113)||(20084596-20084689)
chr6 (152-209)||(20084678-20084735)
chr6 (20-89)||(24386203-24386272)
chr6 (152-216)||(7706862-7706926)
chr6 (18-77)||(7915615-7915675)
chr6 (152-192)||(24386283-24386323)
[»] chr8 (29 HSPs)
chr8 (20-209)||(38606828-38607017)
chr8 (26-216)||(5321955-5322145)
chr8 (20-216)||(1251470-1251665)
chr8 (20-216)||(31273555-31273751)
chr8 (26-199)||(5573706-5573879)
chr8 (15-188)||(29367076-29367248)
chr8 (57-216)||(15714688-15714847)
chr8 (36-199)||(26493347-26493507)
chr8 (20-200)||(31596715-31596894)
chr8 (68-209)||(1240901-1241041)
chr8 (20-146)||(33286137-33286263)
chr8 (18-116)||(15714608-15714706)
chr8 (18-190)||(15233136-15233318)
chr8 (18-116)||(5573877-5573976)
chr8 (31-114)||(38606754-38606837)
chr8 (81-175)||(32959541-32959635)
chr8 (21-89)||(24576180-24576248)
chr8 (84-209)||(24575907-24576023)
chr8 (109-200)||(6809804-6809895)
chr8 (18-94)||(28700058-28700133)
chr8 (50-116)||(5321907-5321973)
chr8 (36-117)||(15233314-15233395)
chr8 (67-116)||(40502175-40502224)
chr8 (65-116)||(24919659-24919710)
chr8 (62-116)||(24919871-24919925)
chr8 (20-110)||(26493252-26493342)
chr8 (112-209)||(24537982-24538078)
chr8 (67-116)||(40502387-40502436)
chr8 (44-116)||(26914631-26914702)
[»] chr7 (31 HSPs)
chr7 (20-216)||(31303373-31303569)
chr7 (44-200)||(20556710-20556866)
chr7 (18-216)||(4290745-4290942)
chr7 (26-216)||(18312753-18312942)
chr7 (18-216)||(21548371-21548568)
chr7 (67-216)||(21589590-21589739)
chr7 (38-209)||(15958313-15958485)
chr7 (18-209)||(5083792-5083982)
chr7 (51-214)||(22740654-22740817)
chr7 (104-209)||(28804990-28805094)
chr7 (18-117)||(32964848-32964947)
chr7 (20-94)||(28804902-28804976)
chr7 (20-116)||(21589721-21589817)
chr7 (41-190)||(32964694-32964852)
chr7 (113-190)||(46943761-46943839)
chr7 (36-116)||(22033158-22033238)
chr7 (20-116)||(28805116-28805212)
chr7 (18-114)||(31303553-31303648)
chr7 (37-116)||(21548550-21548629)
chr7 (50-116)||(5083738-5083803)
chr7 (144-209)||(5174910-5174975)
chr7 (36-116)||(18312924-18313004)
chr7 (20-116)||(20556867-20556963)
chr7 (113-200)||(27523496-27523583)
chr7 (106-148)||(2887188-2887230)
chr7 (50-116)||(15958258-15958324)
chr7 (36-94)||(22032996-22033054)
chr7 (36-113)||(4290927-4291004)
chr7 (20-94)||(22740076-22740150)
chr7 (244-315)||(28804882-28804950)
chr7 (113-169)||(22033095-22033151)
[»] chr5 (29 HSPs)
chr5 (18-216)||(13312517-13312714)
chr5 (86-216)||(35922718-35922848)
chr5 (20-216)||(22169377-22169573)
chr5 (61-193)||(38521984-38522115)
chr5 (51-201)||(43461709-43461858)
chr5 (40-213)||(33958976-33959148)
chr5 (26-201)||(19621481-19621655)
chr5 (81-216)||(42034739-42034872)
chr5 (18-194)||(31189494-31189671)
chr5 (41-148)||(36169394-36169501)
chr5 (20-187)||(43262708-43262889)
chr5 (18-116)||(15221662-15221760)
chr5 (34-116)||(13312696-13312778)
chr5 (113-190)||(30704398-30704476)
chr5 (18-190)||(7155998-7156182)
chr5 (137-192)||(30045885-30045940)
chr5 (24-117)||(30704309-30704402)
chr5 (20-116)||(22169555-22169650)
chr5 (18-113)||(42034857-42034952)
chr5 (20-94)||(35922628-35922702)
chr5 (148-216)||(2477302-2477370)
chr5 (36-116)||(33958911-33958991)
chr5 (20-116)||(35922830-35922926)
chr5 (26-77)||(31189710-31189761)
chr5 (36-110)||(36169337-36169410)
chr5 (154-209)||(15221618-15221673)
chr5 (244-286)||(19621613-19621655)
chr5 (36-89)||(15221572-15221625)
chr5 (69-117)||(7156178-7156226)
[»] scaffold1126 (2 HSPs)
scaffold1126 (36-216)||(202-382)
scaffold1126 (18-113)||(121-217)
[»] chr1 (34 HSPs)
chr1 (20-216)||(29677078-29677263)
chr1 (51-216)||(34490140-34490304)
chr1 (36-201)||(34364169-34364332)
chr1 (59-199)||(25238436-25238575)
chr1 (87-216)||(29167803-29167931)
chr1 (16-216)||(5831448-5831648)
chr1 (36-216)||(38951840-38952023)
chr1 (81-201)||(42604199-42604319)
chr1 (36-200)||(517421-517585)
chr1 (21-117)||(5855201-5855297)
chr1 (20-113)||(34490289-34490382)
chr1 (35-153)||(9929834-9929951)
chr1 (113-189)||(2996025-2996101)
chr1 (55-190)||(9468064-9468199)
chr1 (20-116)||(13350903-13350999)
chr1 (26-113)||(5831633-5831720)
chr1 (18-91)||(13351008-13351081)
chr1 (52-114)||(38244801-38244863)
chr1 (152-216)||(2569960-2570024)
chr1 (36-116)||(38952005-38952085)
chr1 (50-113)||(29167756-29167818)
chr1 (50-190)||(5855056-5855205)
chr1 (18-116)||(29676999-29677096)
chr1 (37-94)||(25238596-25238653)
chr1 (20-116)||(2570006-2570101)
chr1 (20-116)||(2569876-2569974)
chr1 (16-78)||(28499662-28499724)
chr1 (67-116)||(24708074-24708123)
chr1 (59-116)||(38245012-38245069)
chr1 (67-115)||(17227500-17227548)
chr1 (162-201)||(9929739-9929778)
chr1 (244-319)||(5855250-5855322)
chr1 (36-109)||(9929662-9929735)
chr1 (26-102)||(2995928-2996003)
[»] scaffold0251 (1 HSPs)
scaffold0251 (20-201)||(10623-10804)
[»] scaffold0123 (1 HSPs)
scaffold0123 (36-209)||(24021-24195)
[»] scaffold0126 (2 HSPs)
scaffold0126 (51-140)||(21549-21638)
scaffold0126 (19-116)||(21432-21529)
[»] scaffold0043 (2 HSPs)
scaffold0043 (113-190)||(87035-87112)
scaffold0043 (20-116)||(86895-86991)
[»] scaffold0024 (1 HSPs)
scaffold0024 (113-190)||(112158-112235)
[»] scaffold0291 (1 HSPs)
scaffold0291 (113-190)||(5870-5947)
[»] scaffold0213 (2 HSPs)
scaffold0213 (50-110)||(24738-24798)
scaffold0213 (52-115)||(24932-24995)


Alignment Details
Target: chr3 (Bit Score: 143; Significance: 4e-75; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 17 - 276
Target Start/End: Complemental strand, 4169286 - 4169039
Alignment:
Q  17 actttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||||  |||||||||||  |||| ||||||||||||||||||||||||||||| ||||| ||||||         |||||||||||||||    
T  4169286 actttaatatgtac--ccttttgtacctatctcgaaaatttcagttaactaaatatatggtctatgtgatcacatt---------gcgtgaccactattt 4169198  T
Q  117 agaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  4169197 agaagctgaaaaatgtggtaacgcaactaaaatgtgcgtgaccactatttttccatttagttaaccaaataaattctgaaaaaatagtagtcatgcaact 4169098  T
Q  217 gnnnnnnntgaggtcatgcataccatattggttaactgaaatttttcagaatagtacaaa 276  Q
    |       |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  4169097 g-aaaaaatgaggtcacgcataccatattggttaactgaaatttttcagagtagtacaaa 4169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 44 - 209
Target Start/End: Complemental strand, 42638121 - 42637956
Alignment:
Q  44 actctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaac 143  Q
    |||||| ||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42638121 actctcgaaaatttcagttaactaaatatatggtatatatgaccacattttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaac 42638022  T
Q  144 taaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    |||||||||||| ||||||||||||  | ||||||||||||||||||||||||||||| |||||||    
T  42638021 taaaatgcgcgtaaccactatttttcaacttagttaaccaaataaattctgaaaaaatagtggtca 42637956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 3823571 - 3823768
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||| || ||||||||||||||||||| |    
T  3823571 ttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattatatggtctgtgtgaccacattttttctgttgcgtgaccactatttata 3823670  T
Q  120 agctg--aaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||  |||||| ||||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||| || |||||| ||||||| ||||||    
T  3823671 agctgaaaaaaatatggtcacgcaactaaaatgcgtgtgaccact-tttttccacttagttaaccaaataaattatggaaaaatagtggtcacgcaact 3823768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 3785882 - 3786078
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||| || | |||||||| |||||||||||||| || ||| ||||||||||||||| |    
T  3785882 ttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattttatggtctgtgtgaccacattttttctgttacgtgaccactatttata 3785981  T
Q  120 agctg-aaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| || |||||| ||||||| ||||||    
T  3785982 agctgaaaaaatatggtcacgcaactaaaatgcgcgtgaccact-tttttccacttagttaaccaaataaattatggaaaaatagtggtcacgcaact 3786078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 19280126 - 19280306
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctga 125  Q
    ||||||||| |||||||||||   ||| |||| ||||||| |||||||||||||  ||||||||||||| |||| |||||||||||| |||||||| |||    
T  19280126 tgtacacccctttgtaccacta--aaatattttagttaaccaaatatatggtctgagtgaccacattttttcagatgcgtgaccactgtttagaagttga 19280223  T
Q  126 aaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    |||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||| ||||||| | |||||||    
T  19280224 aaaatgtggtcacgcaactaaaattcgcgtgaccacta-ttttccacttagttaaccaaataaattttgaaaaattagtggtca 19280306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 9710907 - 9710738
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||     |||||| ||||| || ||||||||||||||| |||||    
T  9710907 ttaatatgtacacccctttgtaccactctgaaaaatttcagttaaccaaatatatggt-----tgaccatattttttcggttgcgtgaccactacttaga 9710813  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctga 195  Q
    ||||||||| ||||||||||||||| |||| | | |||||||||||||| || |||||||||||||||||||||||    
T  9710812 agctgaaaactgtggtcacgcaact-aaatacacttgaccactatttttccacttagttaaccaaataaattctga 9710738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 1705857 - 1705663
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| |||||| |||| |||| || | | |||||||||||||||| ||||| ||| | | ||||| || |||||   ||||||||||||||||||||||    
T  1705857 ttaatgtgtacatccttgtgtatcattgtaaaaaatttcagttaaccaaatacatgatatgtgtgatcatattttt--agttgcgtgaccactatttaga 1705760  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| |  |||||||||||||||| ||||| |||| | |||||||| |||||    
T  1705759 agctgaaaaatatggtcatgcaactaaaatgcgcgtgaccactatttttccccttagttaaccaaataatttctggaaaactagtggtcatacaact 1705663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 36 - 208
Target Start/End: Original strand, 44080192 - 44080364
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttat-cagttgcgtgaccactatttagaagctgaaaaatgtgg 134  Q
    ||||||||||||| || ||||||||||||| ||||||||  ||| |||||||| ||||| | ||||||||||||||||||||||||| ||||||||||||    
T  44080192 tttgtaccactctgaacaatttcagttaaccaaatatataatctgtgtgaccatattttttgcagttgcgtgaccactatttagaagttgaaaaatgtgg 44080291  T
Q  135 tcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtc 208  Q
    ||||  |||||||||| ||||| ||||||||||| || ||||||||||||| ||||| || |||||| ||||||    
T  44080292 tcac-aaactaaaatgtgcgtgcccactatttttccacttagttaaccaaaaaaattttggaaaaatagtggtc 44080364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 26308823 - 26308640
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctga 125  Q
    ||||||||  ||||||  ||||| |||| ||||||||||  ||||||||||| | |||| |||||||||  || ||  | ||||||||||||||||||||    
T  26308823 tgtacacctctttgtataactctgaaaattttcagttaatcaaatatatggtttgtgtggccacatttttccaattctgggaccactatttagaagctga 26308724  T
Q  126 aaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    | ||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||| |||| | |||||||    
T  26308723 ataatgtggtcacgcaattaaaatgcgcgtgaccactatttttccacttacttaaccaaataaattctggaaaattagtggtca 26308640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 11509823 - 11509969
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||| ||||||||||||| ||||||||||  |||| ||||||  | | | |||||||||||||| ||| ||||||||||  ||||||||    
T  11509823 ttaatgtgtacacccctttgtaccactcttaaaaatttcaaataaccaaatatgcgatttgtgtgaccacattttttcacttgcgtgacctttatttaga 11509922  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattt 166  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  11509923 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgacccctattt 11509969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 198
Target Start/End: Original strand, 5341833 - 5341974
Alignment:
Q  57 tcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtg 156  Q
    |||||||| |||||||||||| | |||||||| ||||| | || ||||||||||||||||||||| |||||||||||||||  |||||||||| |   ||    
T  5341833 tcagttaattaaatatatggtttgtgtgaccatatttttttagctgcgtgaccactatttagaagttgaaaaatgtggtcatacaactaaaatacatatg 5341932  T
Q  157 accactattttttcatttagttaaccaaataaattctgaaaa 198  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  5341933 accactatttttccacttagttaaccaaataaattctgaaaa 5341974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 22432315 - 22432446
Alignment:
Q  85 accacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaa 184  Q
    |||| ||||| ||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||| ||| ||||||||||| ||  ||||| |||||    
T  22432315 accatattttttcagttgcgtgtccactatttaaaagctgaaaaatgtggtcaatcaactaaaatgcgtgtgtccactatttttccacatagttgaccaa 22432414  T
Q  185 ataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||| ||||||||| ||||||||||||||    
T  22432415 ataaattatgaaaaaatagtggtcatgcaact 22432446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 31545603 - 31545725
Alignment:
Q  87 cacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaat 186  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||  | ||||||||| ||||    
T  31545603 cacattttttcagttgagtaaccactatttagaagctgaaaaatgtggtcacacaactaaaatgtgcatgaccactatttttctacttagttaacaaaat 31545702  T
Q  187 aaattctgaaaaaatggtggtca 209  Q
    |||||||| |||||| |||||||    
T  31545703 aaattctggaaaaatagtggtca 31545725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 19624256 - 19624414
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaat 149  Q
    |||||||||||||||  |||||||| ||||  |||| || ||||  ||||||| ||||||| |||||| ||||| ||| |||||| ||| ||||||||||    
T  19624256 aaaaatttcagttaatcaaatatatagtctaagtgatcatatttcttcagttgtgtgacca-tatttataagctaaaatatgtggccacccaactaaaat 19624354  T
Q  150 gcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    || |||||||||||||||| || ||||||||||| |||||||||| |||||| |||||||    
T  19624355 gcacgtgaccactatttttccacttagttaaccacataaattctggaaaaattgtggtca 19624414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 27707624 - 27707788
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaat 149  Q
    ||||| |||| ||||  ||||||||||| | |||| ||||||||| ||| ||| |||||||| |||| ||| || |||||||||||| | ||||||||||    
T  27707624 aaaaaattcaattaatcaaatatatggtttgtgtgcccacattttttcaattgtgtgaccac-attttgaaactaaaaaatgtggtcgcacaactaaaat 27707722  T
Q  150 gcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaac 215  Q
    | || ||||||||||||||||| ||  |||||||||||||||||| |||||| |||| ||||||||    
T  27707723 gtgcatgaccactattttttcacttgattaaccaaataaattctggaaaaatagtggacatgcaac 27707788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 42481300 - 42481416
Alignment:
Q  100 ttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaa 199  Q
    |||||||||||||||||| || ||||||||| ||||||| |||||||||||  |||||||| |||||||  | |||||||||||||||||||||||||||    
T  42481300 ttgcgtgaccactatttaaaaactgaaaaatatggtcacacaactaaaatgtacgtgaccattatttttctacttagttaaccaaataaattctgaaaaa 42481399  T
Q  200 atggtggtcatgcaact 216  Q
    ||  |||||||| ||||    
T  42481400 ataatggtcatgtaact 42481416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 23163264 - 23163400
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt--atcagttgcgtgaccactatttagaagctgaaaaatgtg 133  Q
    |||||||||||||| ||||| ||||||||   |||||||||||| |||||| |||||||  ||||||||| |||||||||| |||| |||||||||| ||    
T  23163264 tttgtaccactctcgaaaatatcagttaatctaatatatggtctatgtgactacattttttatcagttgcatgaccactatgtaga-gctgaaaaatatg 23163362  T
Q  134 gtcacgcaactaaaatgcgcgtgaccactattttttca 171  Q
    ||||| |||||||||||| ||||| || ||||||||||    
T  23163363 gtcacacaactaaaatgcacgtgatcattattttttca 23163400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 27335479 - 27335402
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    |||||||||||||||||||||||||| |||||||||| | |||||||||||||||| || ||||||||||||||||||    
T  27335479 atttagaagctgaaaaatgtggtcacacaactaaaatacacgtgaccactatttttccacttagttaaccaaataaat 27335402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 13358189 - 13358101
Alignment:
Q  112 tatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||| ||  |||||||||||||||||| ||||||||    
T  13358189 tatttagaagctgaaaaatatggtcacacaattaaaatgcgcgttaccactatttttccacatagttaaccaaataaattttgaaaaaa 13358101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 31545811 - 31545714
Alignment:
Q  19 tttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| | ||||||| |||||| ||||||||||| ||||  |||||||||||| |||||||||||||| | ||||| |||||||||||||    
T  31545811 tttaatatgtacatctttttgtatcactctgaaaaatttcaggtaacctaatatatggtctatgtgaccacatttttttagttgtgtgaccactattt 31545714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 27079453 - 27079314
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttag--aagctgaaaaatgtggtcacgcaactaaaa 148  Q
    |||||||| |||||| ||||||||||||| |||||||||| ||| |||||||| ||||||| ||||    ||    ||||||||||||||| | ||||||    
T  27079453 aaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgaccacaattttttcaaa---aaaaatgtggtcacgtagctaaaa 27079357  T
Q  149 tgcgcgtgaccactattttttcatttagttaaccaaataaatt 191  Q
    ||||||||||||  |||||| || |||||||| ||||||||||    
T  27079356 tgcgcgtgaccatcatttttccacttagttaatcaaataaatt 27079314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 27085250 - 27085111
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttag--aagctgaaaaatgtggtcacgcaactaaaa 148  Q
    |||||||| |||||| ||||||||||||| |||||||||| ||| |||||||| ||||||| ||||    ||    ||||||||||||||| | ||||||    
T  27085250 aaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgaccacaattttttcaaa---aaaaatgtggtcacgtagctaaaa 27085154  T
Q  149 tgcgcgtgaccactattttttcatttagttaaccaaataaatt 191  Q
    ||||||||||||  |||||| || |||||||| ||||||||||    
T  27085153 tgcgcgtgaccatcatttttccacttagttaatcaaataaatt 27085111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 216
Target Start/End: Complemental strand, 34627453 - 34627292
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctg-aaaaatgtggtcacgcaactaaaat 149  Q
    |||||||||||||||||    |||| ||| |||||| ||||||| ||||||||  |  ||||||||| || | | |||||||||||||||||||||||||    
T  34627453 aaaatttcagttaacta----tatgatctgtgtgac-acattttttcagttgcaaggacactatttaaaacccggaaaaatgtggtcacgcaactaaaat 34627359  T
Q  150 gcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
     |  || |||| ||||||| |||||||||||||||||||||||  ||||||| || |||| ||||||    
T  34627358 acatgtaaccattatttttccatttagttaaccaaataaattcgaaaaaaatagtagtcacgcaact 34627292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 26308553 - 26308648
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    |||||||||||||||  ||||||| |||| | |||||| ||||||||||||||||||||| | |||||||||||| | | ||||| ||||||||||    
T  26308553 ctttaatatgtacacttttttgtatcactttgaaaaatatcagttaactaaatatatggtttgtgtgaccacattgttttagttgtgtgaccacta 26308648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 27365085 - 27365008
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    |||||||| ||||||||||| |||||||| ||||||| || ||||||||||||||| || ||| ||||||||||||||    
T  27365085 atttagaaactgaaaaatgtagtcacgcagctaaaatacgtgtgaccactatttttccacttaattaaccaaataaat 27365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 3823845 - 3823750
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||| ||||| ||||||| ||||  ||||||| |||||||| |||||||| |||| ||||||||| |||| | |||||||||||||||||||    
T  3823845 ttaatatgttcacccgtttgtactactcagaaaaattccagttaaccaaatatattgtctgtgtgaccacgtttttt-agttgcgtgaccactattt 3823750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 22432524 - 22432428
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| |||||||||||||||| |||| | |||||||| ||| ||  ||||||||||||| |||||| ||||||| | |||||| ||||||||||||    
T  22432524 ttaatgtgtacacccttttgtagcactttgaaaaatttgagtaaatcaaatatatggtctgtgtgactacatttttttagttgcatgaccactattt 22432428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 18733670 - 18733572
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| ||||||||| ||| ||||| ||| |||||||| ||||||||||||||||||| |  ||||||||| ||| | ||||||||||| ||||||||    
T  18733670 ctttaatgtgtacacccctttataccattctgaaaaatttaagttaactaaatatatggtatgggtgaccaca-tttcttagttgcgtgacaactattta 18733572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 27335307 - 27335406
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| ||||||||| ||||||||| ||| |||| ||| ||||||| ||  ||||||| | |||||||||||||| | ||||||||||| ||||||||    
T  27335307 ctttaatgtgtacacccctttgtaccattctgaaaattttgagttaaccaataatatggtatgtgtgaccacatttttttagttgcgtgacaactattta 27335406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 41571797 - 41571904
Alignment:
Q  54 atttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgc 153  Q
    |||||||| ||  ||||||||||| | ||| |||||||||| |||||| ||||||||||||||| ||| ||||||||||| |||| ||  |||||||  |    
T  41571797 atttcagtcaatcaaatatatggtatatgtaaccacattttttcagttacgtgaccactatttaaaagttgaaaaatgtgatcacacagttaaaatgtac 41571896  T
Q  154 gtgaccac 161  Q
    ||||||||    
T  41571897 gtgaccac 41571904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 11501309 - 11501371
Alignment:
Q  139 gcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaat 201  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||||||| | |||||||    
T  11501309 gcaactaaaatgtgcgtgaccactatttttccaattagttaaccaaataaattttaaaaaaat 11501371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 19280391 - 19280298
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||| ||||||||| ||||||||||||| |||| ||| ||||||  ||||||||||||| |||||| ||||||| | ||| | ||||||||||    
T  19280391 ttaatgtgtacacccgtttgtaccactctgaaaatttttagttaatcaaatatatggtctgtgtgacaacattttttaagtggtgtgaccacta 19280298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 27326124 - 27326047
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    |||||||| || ||||||||||||||||||||||||| |  ||||||||||||||| || || |||||| ||||||||    
T  27326124 atttagaaactaaaaaatgtggtcacgcaactaaaatacatgtgaccactatttttccagttggttaactaaataaat 27326047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 27332361 - 27332284
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    |||||||| || ||||||||||||||||||||||||| |  ||||||||||||||| || || |||||| ||||||||    
T  27332361 atttagaaactaaaaaatgtggtcacgcaactaaaatacatgtgaccactatttttccagttggttaactaaataaat 27332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 5342063 - 5341996
Alignment:
Q  27 gtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    |||||||| ||||||| ||||| |||||||||||||||   |||||||||||| ||||||||||||||    
T  5342063 gtacacccctttgtacgactctgaaaaatttcagttaatcgaatatatggtctgtgtgaccacatttt 5341996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 39126189 - 39126263
Alignment:
Q  125 aaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    ||||||||||| |||||||||||| ||||| || |||||||||| || ||||||||||||||||||| | ||||||    
T  39126189 aaaaatgtggttacgcaactaaaa-gcgcgcgatcactatttttccacttagttaaccaaataaattttaaaaaaa 39126263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 3786153 - 3786060
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||| ||||| |||  |||||||  ||||||| |||||||| |||||||| |||| ||||||||| |||| | |||||||||||||||||||    
T  3786153 ttaatatgttcacccgttt--accactcagaaaaattccagttaaccaaatatattgtctgtgtgaccacgtttttt-agttgcgtgaccactattt 3786060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 27040760 - 27040683
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||||| |||||  |||||||| |||||| ||||||||| ||| ||||| |||| ||| ||||||||||||||||||    
T  27040760 tttgtactactctagaaaatttcggttaaccaaatatatgatctgtgtgatcacaatttttcagttgcgtgaccacta 27040683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 34164326 - 34164375
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  34164326 aaatatatggtctgtgtgaccacattttataaggtgcgtgaccactattt 34164375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 11501244 - 11501310
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgc 103  Q
    ||||||||||||| |||| |||||  |||| ||||||||||||| |||||||||||||| ||||||||    
T  11501244 tttgtaccactctgaaaattttcaaataaccaaatatatggtctgtgtgaccacatttt-tcagttgc 11501310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 23163787 - 23163837
Alignment:
Q  131 gtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaac 181  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||||    
T  23163787 gtggtcacgcaactaaaatgtacgtgaccactatttcttcacttagttaac 23163837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 39126329 - 39126263
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||||| ||||||| ||||||||| ||| |||||| ||||||| | ||||||||||| |||||||    
T  39126329 aaaaatttaagttaaccaaatatatgatctgtgtgacaacatttttttagttgcgtgactactattt 39126263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 33488406 - 33488333
Alignment:
Q  44 actctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||| |||||||| ||||||||||||||||||| | | ||||| ||| || | ||||||| ||||||||||||    
T  33488406 actctgaaaaatttaagttaactaaatatatggtatgtatgaccgcatatttttagttgcgcgaccactattta 33488333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 13359052 - 13358996
Alignment:
Q  38 tgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    |||||||||||  |||||||||||||| |||||||||||||| ||||| || |||||    
T  13359052 tgtaccactctggaaaatttcagttaattaaatatatggtctgtgtgatcatatttt 13358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 11509989 - 11510027
Alignment:
Q  155 tgaccactattttttcatttagttaaccaaataaattct 193  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  11509989 tgaccactattttttcaattagttaactaaataaattct 11510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1705593 - 1705642
Alignment:
Q  28 tacacccttttgtaccactctcaaaaatttcagttaactaaatatatggt 77  Q
    ||||||| ||| ||||||||| |||||||| |||| ||||||||||||||    
T  1705593 tacacccctttctaccactctgaaaaatttaagtttactaaatatatggt 1705642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 3823797 - 3823869
Alignment:
Q  244 ttggttaactgaaatttttcagaatagtacaaatgaatgtacatatcattaagggtgcctacctatcattgctctt 319  Q
    ||||||||||| |||||||| || ||||||||| |  || ||||   |||||||||| ||||||||||||||||||    
T  3823797 ttggttaactggaatttttctgagtagtacaaacgggtgaacat---attaagggtgtctacctatcattgctctt 3823869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 18733430 - 18733495
Alignment:
Q  52 aaatttcagttaactaaatatatggtctttgtgaccacatttta-tcagttgcgtgaccactattt 116  Q
    |||||||| ||||| ||||||||||| | ||| ||||||||||| || |||||||||| |||||||    
T  18733430 aaatttcaattaaccaaatatatggtttgtgttaccacattttattcggttgcgtgactactattt 18733495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 43900463 - 43900642
Alignment:
Q  35 ttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtgg 134  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  43900463 ttttgtaccactctcgaaaatttcaggtaactaaatatatggtctgtgtgatcacattttttcagttgtgtgaccactatttagaagctgaaaaatgtgg 43900562  T
Q  135 tcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaa 214  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||| ||||    
T  43900563 tcacgcaactaaaatgcacgtgaccactatttttctatttagttaaccaaataaattctgaaaaaataggggtcacgcaa 43900642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 30906242 - 30906051
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||  ||| |||||| |||||||||||||||    
T  30906242 ctttaatgtgtacacccttttgtaccactctgaaaaatttcagttaaccaaatatatggtctgcgtgaccaccatttttcagtttcgtgaccactattta 30906143  T
Q  118 gaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| || ||| || |||||||    
T  30906142 aatgctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatttttccacttagttaagcaaataaattatggaaacatagtggtca 30906051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 45305887 - 45306067
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||  |||||||| |||| | |||||| ||||| |||||||||||||||| ||||| |    
T  45305887 ttaatatgtacactcctttgtaccactctaaaaaatttcagttaatcaaatatatagtctgtatgaccatattttttcagttgcgtgaccac-atttaaa 45305985  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaat 201  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||| |||||||    
T  45305986 agctgaaaaatgtggccacgcaactaaaatgtgcgtgaccactatttttccacttagttaaccgaataaattctaaaaaaat 45306067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 81 - 317
Target Start/End: Complemental strand, 1400901 - 1400667
Alignment:
Q  81 tgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaa 180  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| || ||||||||    
T  1400901 tgtgaccacatttt-tcagttgcgtgaccactatttagaagctgaaaaatgtggtcacacaacaaaaatgcgcgtgatcactatttttccacttagttaa 1400803  T
Q  181 ccaaataaattctgaaaaaatggtggtcatgcaactgnnnnnnntgaggtcatgcataccata---ttggttaactgaaatttttcagaatagtacaaat 277  Q
    ||||||||||| || |||||| ||||||| ||||||        || |||||  |||||||||   ||||||||||||||||||||||| | |||||||     
T  1400802 ccaaataaattatggaaaaatagtggtcacgcaact-taaaaaatgtggtcacacataccatatatttggttaactgaaatttttcagattggtacaaaa 1400704  T
Q  278 gaatgtacatatcattaagggtgcctacctatcattgctc 317  Q
    |  ||||||   ||||||||||| |||||||| |||||||    
T  1400703 gggtgtaca---cattaagggtgtctacctattattgctc 1400667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 28527445 - 28527316
Alignment:
Q  86 ccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaa 185  Q
    ||||||||| | |||||||||||||  |||||||||||| ||||||| |||||| |||||| ||||| ||||||||||||||| || |||||||||||||    
T  28527445 ccacatttttttagttgcgtgaccataatttagaagctggaaaatgttgtcacg-aactaacatgcgtgtgaccactatttttccaattagttaaccaaa 28527347  T
Q  186 taaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||| |||||| ||||||| ||||||    
T  28527346 taaattctggaaaaatagtggtcacgcaact 28527316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 289
Target Start/End: Original strand, 33667328 - 33667506
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgc 212  Q
    ||||||||| |||||||||||||||||||| ||||||| |||| |||||||||||| || ||||||||||||||| ||||||||||||| ||||||| ||    
T  33667328 atttagaagttgaaaaatgtggtcacgcaattaaaatgtgcgtaaccactatttttccacttagttaaccaaatatattctgaaaaaatagtggtcacgc 33667427  T
Q  213 aactgnnnnnnntgaggtcatgcataccata---ttggttaactgaaatttttcagaatagtacaaatgaatgtacatat 289  Q
    ||||        || | |||| |||||||||   |||||||||| |||||||||||| | ||||||| || |||||||||    
T  33667428 aact-taaaaaatgtgttcatacataccatatatttggttaactaaaatttttcagagtggtacaaaagagtgtacatat 33667506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 1400689 - 1400785
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  1400689 ttaatgtgtacacccttttgtaccaatctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacattttttaagttgcgtgaccactattt 1400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 216
Target Start/End: Complemental strand, 7378643 - 7378463
Alignment:
Q  33 ccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgt 132  Q
    ||||||| |||| ||  |||||||||||||||| ||||||||||| | |||||||| ||||| |||||||||| ||||| ||||||||||| |||||| |    
T  7378643 ccttttgcaccattcagaaaaatttcagttaacaaaatatatggtttgtgtgaccatattttttcagttgcgtaaccac-atttagaagct-aaaaatat 7378546  T
Q  133 ggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||| |||||||||||||| | |||||||||||| || || ||| |||||| | |||||| | ||||||| || |||| ||||||    
T  7378545 ggtgacgcaactaaaatgtgtgtgaccactattattccacttaattaacc-attaaattttaaaaaaatagtagtcacgcaact 7378463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 28527244 - 28527334
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||| ||||||||||| | ||||||||||| |||| ||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  28527244 tgtacacccctttgtaccactttgaaaaatttcagctaaccaaatatatggtctgtgtgaccacatttttttagttgcgtgaccactattt 28527334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 33667509 - 33667413
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||| | | ||| |||||||| | |||||||||||||||||||    
T  33667509 ttaatatgtacactcttttgtaccactctgaaaaattttagttaaccaaatatatggtatgtatgaacacattttttaagttgcgtgaccactattt 33667413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 41212500 - 41212426
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    |||||||||| |||| ||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  41212500 ttaatatgtatacccctttgtaccactctgaaaaatttaagttaaccaaatatatggtctgtgtgaccacatttt 41212426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 30905966 - 30906060
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactat 114  Q
    ||||| |||||| || |||||| || ||| |||| ||| ||||||| | |||||| |||| |||||||||||||  | ||||| |||||||||||    
T  30905966 ttaatgtgtacatccctttgtaacattctgaaaatttttagttaaccagatatattgtctgtgtgaccacatttatttagttgtgtgaccactat 30906060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 34175155 - 34175209
Alignment:
Q  136 cacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    ||||||||||||||| | |||||  |||||||| || ||||||||||||||||||    
T  34175155 cacgcaactaaaatgtgtgtgactgctatttttccacttagttaaccaaataaat 34175209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 9808994 - 9809162
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    |||||||||||||||||||||||| || | ||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  9808994 ttaatatgtacacccttttgtaccgctatgaaaaaattcagttaactaaatatatggtctgcgtgaccacattttttcagttgcgtgaccactatttaga 9809093  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataa 188  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  9809094 agctgaaaaatgtagtcacgcaactcaaatgcgcgtgaccactatttttccatttagttaaccaaataa 9809162  T

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Target: chr4; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 17633530 - 17633337
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| || ||||    
T  17633530 ttaatatgtacacccctttgtaccactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacattttttcagttgcgtgaccac-atctaga 17633432  T
Q  120 ag-ctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgca 213  Q
    ||  |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || | |||| |||||||||||    
T  17633431 agtttgaaaaatatggtcacgcaactaaaatgcgcgtgaccactattttttaacttagttaaccaaataaattttggacaaattgtggtcatgca 17633337  T

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Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 9810680 - 9810860
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| |  || |||||||||| ||||||||||||||||||||||||    
T  9810680 ttaatatgtacacccttttgtaccactatgaaaaatttcagttaattaaatatatggtttgcgttaccacattttttcagttgcgtgaccactatttaga 9810779  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    |||| |||||||| ||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||| || ||||||||    
T  9810780 agctaaaaaatgtagtcacgcaactcaaatgtgcgtgacctctatttttccatttagttaaccaaataatttatgaaaaaa 9810860  T

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Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 16583523 - 16583712
Alignment:
Q  27 gtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaa 126  Q
    ||||| || |||||||||||||| ||||||||||||||| |||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||    
T  16583523 gtacatccctttgtaccactctcgaaaatttcagttaaccaaatatatggttgatgtgaccacattttttcagttgcgtgaccactatttagaagctgaa 16583622  T
Q  127 aaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||| || ||| |||||||||||||||||||||||||||||| || ||| ||||||||||||||| ||  ||||| || |||| ||||||    
T  16583623 aaatatgatcatgcaactaaaatgcgcgtgaccactatttttccacttaattaaccaaataaattatggtaaaatagtagtcacgcaact 16583712  T

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Target: chr4; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 55667013 - 55666844
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |    
T  55667013 ttaatatgtacactcctttgtaccactttcgaaaatttcagttaactaaatatatggtctgtgtgaccacatttt-tcagttgcgtgaccattatttata 55666915  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaatt 191  Q
    |||||||||| ||||||||| ||||||||||  |||||||||||||||| || |||||||| ||||||||||    
T  55666914 agctgaaaaacgtggtcacg-aactaaaatgttcgtgaccactatttttccacttagttaagcaaataaatt 55666844  T

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Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 19596698 - 19596891
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttat--cagttgcgtgaccactatt 115  Q
    ||||||| ||||||||| ||||||||||||| |||||| || ||| || ||||||||||||   ||||||||||||| |  ||| || || |||| ||||    
T  19596698 ctttaatgtgtacacccctttgtaccactctgaaaaatctctgttgaccaaatatatggtcagcgtgaccacattttttttcagctgtgtaaccattatt 19596797  T
Q  116 tagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||   || |||||||||||||||||||||||||| || |||||||    
T  19596798 tagaagctgaaaaatgtggtcacgcaactaaaatgcgcatgactactatttacccacttagttaaccaaataaattctgaaaacatagtggtca 19596891  T

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Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 1966961 - 1966826
Alignment:
Q  81 tgtgaccacattttatc-agttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagtta 179  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||    
T  1966961 tgtgaccacattttttttagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaact-aaatgcgcgtgaccactatttttccacttaatta 1966863  T
Q  180 accaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||||||| |||| | ||||||| ||||||    
T  1966862 accaaataaattctggaaaactagtggtcacgcaact 1966826  T

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Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 8740966 - 8740809
Alignment:
Q  34 cttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttat-cagttgcgtgaccactatttagaagctgaaaaatgt 132  Q
    |||||||| ||||||||||| ||||||||||  |||| |||| ||| |||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  8740966 cttttgtatcactctcaaaattttcagttaatcaaatgtatgatctgtgtgaccatatttttttcagttgcgtgatcactatttagaagctgaaaaatgt 8740867  T
Q  133 ggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaatt 191  Q
    |||||||  |||||||||||||||||||||||||||  | ||||||||| |||||||||    
T  8740866 ggtcacg-tactaaaatgcgcgtgaccactatttttctacttagttaactaaataaatt 8740809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 209
Target Start/End: Complemental strand, 33179928 - 33179759
Alignment:
Q  40 taccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacg 139  Q
    ||||||| || ||||||| | ||||||||||||||||| | ||| |||| || || |||| ||||||||||||||||||||  |||||||||||| |||     
T  33179928 taccactatcgaaaattttaattaactaaatatatggtatgtgttaccatatcttttcagctgcgtgaccactatttagaaagtgaaaaatgtggccaca 33179829  T
Q  140 caactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    ||||||||||||| ||||||||||||||| || |||||||| |||||||||||| ||||| | |||||||    
T  33179828 caactaaaatgcgtgtgaccactatttttccacttagttaatcaaataaattctaaaaaagtagtggtca 33179759  T

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Target: chr4; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 35544578 - 35544438
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaat 149  Q
    |||||||||||||||  ||||||||||| | ||||| |||||||| || ||||  |||||||||||||||||||||||||||||||||||||||| ||||    
T  35544578 aaaaatttcagttaatcaaatatatggtatgtgtgatcacattttttccgttgtatgaccactatttagaagctgaaaaatgtggtcacgcaact-aaat 35544480  T
Q  150 gcgcgtgaccactattttttcatttagttaaccaaataaatt 191  Q
    ||| |||| |||||||||| || ||| ||||| |||||||||    
T  35544479 gcgtgtgatcactatttttccacttaattaactaaataaatt 35544438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 2433654 - 2433811
Alignment:
Q  38 tgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtca 137  Q
    ||||||||| | |||||||||| ||||  ||||||||| |    |||| |||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  2433654 tgtaccactttgaaaaatttcaattaatcaaatatatgat----gtgatcacattttttcagttgtttgaccactatttagaagctgaaaaatgtggtca 2433749  T
Q  138 cgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
     | ||  ||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||    
T  2433750 tg-aaaaaaaatgcacgtgaccactattttttcactttgttaaccaaataaattatgaaaaaa 2433811  T

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Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 33249729 - 33249616
Alignment:
Q  96 tcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctga 195  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||| ||  ||||||| |||||||||| |||    
T  33249729 tcagttgcgtgaccactatttagaaggtgaaaaatgtggtcacgcacataaaatgcgtgtgaccactatttttccacctagttaatcaaataaattttga 33249630  T
Q  196 aaaaatggtggtca 209  Q
    |||| | |||||||    
T  33249629 aaaagtagtggtca 33249616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 42908520 - 42908675
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaa-tgtggtcacgcaactaaaat 149  Q
    ||||||| ||| ||| ||||||||||||| | |||||| ||||| ||||||| |||||||| ||||| ||| ||||||| |||| |||||||||||||||    
T  42908520 aaaattttagtgaaccaaatatatggtctgtttgaccatatttt-tcagttgtgtgaccac-atttaaaagttgaaaaaatgtgatcacgcaactaaaat 42908617  T
Q  150 gcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggt 207  Q
    ||||||||||||||| ||| |  |||||||||||||||||||||| |||||| |||||    
T  42908618 gcgcgtgaccactatgtttcctcttagttaaccaaataaattctggaaaaatagtggt 42908675  T

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Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 24669361 - 24669270
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||||| ||||||||||||| |||||||| ||||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  24669361 tgtacacccctttgtaccactctgaaaaatttaagttaatcaaatatatggtctgtgtgaccacattttttcagttgcgtgaccactattta 24669270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 216
Target Start/End: Original strand, 14351000 - 14351178
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggt 135  Q
    |||| ||||||||| ||||||||||||||| |||||||   | | | ||  ||||||||  || |||| | |||||||||| |||||| ||| ||||| |    
T  14351000 tttgcaccactctcgaaaatttcagttaaccaaatatacaatttgtatggtcacatttt--caattgcataaccactattttgaagctaaaagatgtgat 14351097  T
Q  136 cacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||||||||||||  | |||||||||||||| || ||||||||||||||||||| ||  ||||| ||||||| ||||||    
T  14351098 cacgcaactaaaatgtccatgaccactatttttccacttagttaaccaaataaattttgtcaaaatagtggtcacgcaact 14351178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 24669123 - 24669274
Alignment:
Q  51 aaaatttcagttaactaaatat-atggtctttgtgaccacattttatcagttgcgtgaccactattt-----------agaagctgaaaaatgtggtcac 138  Q
    ||||||| ||||| | |||||| ||||| | |||||||||||||| |||||||||||||||||||||           |||| || |||||| |||||||    
T  24669123 aaaatttaagttagccaaatattatggtatgtgtgaccacattttttcagttgcgtgaccactattttttcagcatttagaaactcaaaaatatggtcac 24669222  T
Q  139 gcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  24669223 gcaactaaaattcgtgtgaccactattttttcacttagttaaccaaataaat 24669274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 1966758 - 1966841
Alignment:
Q  28 tacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||||    
T  1966758 tacacccttttgtaccactctgaaaa-tttcagttaaccaaatatatggtctgtgtgaccacatttt-ttagttgcgtgaccacta 1966841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 20874814 - 20874880
Alignment:
Q  81 tgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaa 147  Q
    |||||||| ||||| |||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  20874814 tgtgaccatattttttcagttgcgtgatcactttttagaagctgaaaaatgtggtaacgcaactaaa 20874880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 42908763 - 42908666
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||| ||| | ||||||||||||| |||||||| ||||||| ||||||||||| | |||||||||||||| | ||||| || ||||||||||    
T  42908763 ctttaatatgtgcactcatttgtaccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttt-ttagttgagtcaccactattt 42908666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 14351240 - 14351160
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||||||||| || ||||||| ||||||||||| | |||||||| |||||   |||||||||||||||||||    
T  14351240 tttgtaccactctcaaaaaatttagttaaccaaatatatggtttgtgtgaccatatttttctagttgcgtgaccactattt 14351160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 17633255 - 17633331
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    ||||||| ||||||| | ||||||||||||  |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  17633255 ctttaatgtgtacactcatttgtaccactccgaaaaattttagttaaccaaatatatggtctgtgtgaccacatttt 17633331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 19747012 - 19746939
Alignment:
Q  19 tttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatt 92  Q
    |||||| ||||||||| |||||| || |||| ||||||||||||||||||||| ||||||| | ||||||||||    
T  19747012 tttaatgtgtacacccctttgtatcattctcgaaaatttcagttaactaaatacatggtctgtttgaccacatt 19746939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 19792794 - 19792867
Alignment:
Q  19 tttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatt 92  Q
    |||||| ||||||||| |||||| || |||| ||||||||||||||||||||| ||||||| | ||||||||||    
T  19792794 tttaatgtgtacacccctttgtatcattctcgaaaatttcagttaactaaatacatggtctgtttgaccacatt 19792867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 9810941 - 9810866
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccaca-ttttatcagttgcgtgacca 110  Q
    |||||||||||||  ||| ||| ||||||| ||||||||||||| |||||||||| |||| | |||||||||||||    
T  9810941 tttgtaccactctagaaattttaagttaaccaaatatatggtctgtgtgaccacattttttttagttgcgtgacca 9810866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 1967016 - 1966978
Alignment:
Q  91 ttttatcagttgcgtgaccactatttagaagctgaaaaa 129  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1967016 ttttttcagttgcgtgaccactatttagaagctgaaaaa 1966978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 25007675 - 25007625
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgac 86  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||| ||||||    
T  25007675 tttgtaccattctcgaaaatttcagttaaccaaatatatggtctatgtgac 25007625  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 19596977 - 19596882
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccaca-ttttatcagttgcgtgaccactat 114  Q
    ||||| |||||| |||||||||||  | |  ||||||||||||||| |||||||||||   |||||||||| |||| | || ||||||||||||||    
T  19596977 ttaatgtgtacatccttttgtacccttttggaaaatttcagttaaccaaatatatggtacgtgtgaccacattttttttagctgcgtgaccactat 19596882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 8740715 - 8740796
Alignment:
Q  31 acccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    |||| |||| |||||||| |||||||  ||||||  ||||||||||| | |||||||||||||| | ||||| ||||||||||    
T  8740715 acccctttgcaccactctgaaaaattcaagttaatcaaatatatggtttatgtgaccacatttttttagttg-gtgaccacta 8740796  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 9809254 - 9809196
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    |||||||||||||  ||| ||| ||||||| || |||||||||| ||||||||||||||    
T  9809254 tttgtaccactctagaaattttaagttaaccaagtatatggtctgtgtgaccacatttt 9809196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 33249554 - 33249622
Alignment:
Q  21 taatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccac 89  Q
    ||||||||||||| |||| ||||| ||| ||||||| |||||||  |||||| |||| | |||||||||    
T  33249554 taatatgtacacctttttataccattctaaaaaattccagttaatcaaatatgtggtatgtgtgaccac 33249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 22608281 - 22608476
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  22608281 ttaatgtgtacacccctttgtaccactctcaaaaattttagttaaccaaatatatggtctgtgtgactacatttt-tcagttgcgtgaccactatttaga 22608379  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| | |||||||| ||||||| |||||||||| | ||||||| ||||||    
T  22608380 agctgaaaaatgtggtcatgcaactaaaatgtgcatgaccactattttttgaattagttaatcaaataatttctgaaaaattagtggtcacgcaact 22608476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 20 - 200
Target Start/End: Complemental strand, 33815198 - 33815025
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| |||||||||||||||||||       ||| |||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  33815198 ttaatgtgtacacccttttgtacca-------aaacttcaattaactaaatatatagtctgtgtgaccacattttttcagttgcgtgaccactatttaga 33815106  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  33815105 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccaccatttttccacttagttaaccaaataaattctgaaaaaa 33815025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 39 - 214
Target Start/End: Complemental strand, 10304870 - 10304695
Alignment:
Q  39 gtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcac 138  Q
    |||| |||||| ||||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||| |||||||  ||||||    
T  10304870 gtactactctcgaaaattttagtgaactaaatatatggtctgtgtgaccacattttttcagttgcgtgatcactatttagaagcagaaaaatacggtcac 10304771  T
Q  139 gcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaa 214  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||    
T  10304770 gcaactaaaatgcgcgtgaccactattttttcacttagttaaccaaataaattctggaaaaaaagtggtcacgcaa 10304695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 3222352 - 3222530
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| |||||||||||| |||  ||||| ||||||||||  |||| ||||||||||| | |||||||||||||| |||||||||||||||||||||| |    
T  3222352 ttaatgtgtacacccttt-gtattactcttaaaaatttcaaataaccaaatatatggtgtctgtgaccacattttttcagttgcgtgaccactatttaaa 3222450  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaa 199  Q
     ||||||||||| ||||||||||||||||||  |||||||||||||||| || |||||||||||||||||||||| ||||    
T  3222451 tgctgaaaaatgcggtcacgcaactaaaatgtacgtgaccactatttttccacttagttaaccaaataaattctggaaaa 3222530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 23595072 - 23595253
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||| ||||| | ||||| ||||| ||||||||    
T  23595072 ctttaatgtgtacacccttttgtatcactctcgaaaatttaagttaactaaatatatggtctgtgtgaccatatttttttagttgtgtgacaactattta 23595171  T
Q  118 gaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    ||||||||||||||||||||  |||        |||||| ||||||||||| || ||||||||| ||||||||||||||||| | |||||||    
T  23595172 gaagctgaaaaatgtggtca--caa--------cgcgtggccactatttttccacttagttaacaaaataaattctgaaaaattagtggtca 23595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 138820 - 138708
Alignment:
Q  104 gtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatgg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || ||||| ||||||||||||||||||||||| |    
T  138820 gtgaccactatttagaagctgaaaaatgtggtcacgcaactaaattgtgcgcgaccactatttttccacttagtcaaccaaataaattctgaaaaaatag 138721  T
Q  204 tggtcatgcaact 216  Q
    |||||| ||||||    
T  138720 tggtcacgcaact 138708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 146841 - 146729
Alignment:
Q  104 gtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatgg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || ||||| ||||||||||||||||||||||| |    
T  146841 gtgaccactatttagaagctgaaaaatgtggtcacgcaactaaattgtgcgcgaccactatttttccacttagtcaaccaaataaattctgaaaaaatag 146742  T
Q  204 tggtcatgcaact 216  Q
    |||||| ||||||    
T  146741 tggtcacgcaact 146729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 3620917 - 3620761
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatg 150  Q
    ||||||||||||||  |||||| |||||| || ||  ||| ||| ||| | |||||| ||||||||||||| ||||||||||| |||| ||||||||||     
T  3620917 aaaatttcagttaatcaaatatgtggtctgtgcgaatacaattt-tcaatcgcgtgatcactatttagaagttgaaaaatgtgatcacacaactaaaata 3620819  T
Q  151 cgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtc 208  Q
       |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  3620818 tatgtgaccactattttttcacttagttaaccaaataaattctgaaaaaatagtggtc 3620761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 9474562 - 9474718
Alignment:
Q  28 tacacccttttgtaccactctc-aaaaatttcagttaactaaatatatggtctttgtgac--cacattttatcagttgcgtgaccactatttagaagctg 124  Q
    |||| ||||||||||||||||  |||||||||||||| |||| |||||| ||| | ||||  |||||||| |||||||||||||       ||||||||     
T  9474562 tacatccttttgtaccactcttgaaaaatttcagttagctaactatatgatctatatgacaccacattttttcagttgcgtgac-------tagaagcta 9474654  T
Q  125 aaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaa 189  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||| |||||||||||||||||    
T  9474655 aaaaatgtggtcacgaaa-taaaatgcgtgtgaccactattttttcacttagttaaccaaataaa 9474718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 9068599 - 9068503
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  9068599 ttaatgtgtacacccttttgtaccactctgaaaaattttagttaatcaaatatatggtatgtgtgaccacatttttttagttgcgtgaccactattt 9068503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 9068411 - 9068521
Alignment:
Q  105 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggt 204  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||||||  ||||||||| || |||| ||| ||||||| ||||| |||||| ||    
T  9068411 tgaccactatttaaaagctgaaaaatgtggtcacacatctaaaatgcgcgtgattactatttttccacttag-taaacaaataagttctggaaaaatagt 9068509  T
Q  205 ggtcatgcaact 216  Q
    ||||| ||||||    
T  9068510 ggtcacgcaact 9068521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 2430664 - 2430600
Alignment:
Q  152 gcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  2430664 gcgtgaccactatttttccacttagttaaccaaataaattctgaaaaaatagtggtcatgcaact 2430600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 2834974 - 2835069
Alignment:
Q  112 tatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggt 207  Q
    |||||| |||||||||||| |||||| ||||||||||| |||||||||| ||||||| || |||| |||| ||||||||| || |||||| |||||    
T  2834974 tatttaaaagctgaaaaatatggtcatgcaactaaaatacgcgtgaccattatttttccacttagctaactaaataaattatggaaaaatagtggt 2835069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 7706777 - 7706876
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccaca-ttttatcagttgcgtgaccactattt 116  Q
    ||||||| |||||| |||||||||||| ||| |||||||| ||||||   |||||||||| | |||||||||| |||| |||||||||||||||||||||    
T  7706777 ctttaatgtgtacatccttttgtaccattctgaaaaattttagttaatataatatatggtttgtgtgaccacatttttttcagttgcgtgaccactattt 7706876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 7915787 - 7915696
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccac 111  Q
    ||||| |||||||||| || ||||||||| |||||||||||||||  |||||||| |||| |||||||||| ||| | ||||||||||||||    
T  7915787 ttaatgtgtacaccctcttttaccactctgaaaaatttcagttaatcaaatatatcgtctgtgtgaccacaattttttagttgcgtgaccac 7915696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 30056039 - 30056138
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccaca-ttttatcagttgcgtgaccactattt 116  Q
    ||||||| | ||| ||| ||||||| ||||| |||||||||||||||| ||||||||||||| |||||||||| |||| |  ||||||||||||||||||    
T  30056039 ctttaatgtatactcccctttgtacaactctaaaaaatttcagttaaccaaatatatggtctatgtgaccacatttttttttgttgcgtgaccactattt 30056138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 23595335 - 23595261
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    ||||||||||||||||||||||  ||||| |||||||||| ||||| |||||||| |||| ||||||||||||||    
T  23595335 ttaatatgtacacccttttgtattactctaaaaaatttcaattaaccaaatatatagtctgtgtgaccacatttt 23595261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 10304627 - 10304707
Alignment:
Q  31 acccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccact 112  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| ||| | | |||||||||||||    
T  10304627 acccctttgtaccactctaaaaaatttcagttaaccaaatatatggtctgtgtgaccacacttt-ttaattgcgtgaccact 10304707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 138650 - 138726
Alignment:
Q  40 taccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||| ||||| || ||||||| ||||||||||||| |||| ||||||||| | |||||||||||||||||||    
T  138650 taccactctaaaaaaatttagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattt 138726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 146671 - 146747
Alignment:
Q  40 taccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||| ||||| || ||||||| ||||||||||||| |||| ||||||||| | |||||||||||||||||||    
T  146671 taccactctaaaaaaatttagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattt 146747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 11108235 - 11108147
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcac 138  Q
    ||||| |||| ||||| ||||||||| | | |||||||||||||| ||||||||||||||||| |  | ||||||||||||||||||||    
T  11108235 aaaaaattcaattaaccaaatatatgatttgtgtgaccacattttttcagttgcgtgaccactgtcaataagctgaaaaatgtggtcac 11108147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 2430706 - 2430650
Alignment:
Q  60 gttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||| ||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  2430706 gttaaccaaatatatggtttgtgtgaccacattttttcagttgcgtgaccactattt 2430650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 11108102 - 11108159
Alignment:
Q  37 ttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    |||||| ||||| |||||||||| ||||| ||||||||||||| ||||||||||||||    
T  11108102 ttgtactactctgaaaaatttcaattaaccaaatatatggtctgtgtgaccacatttt 11108159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 18980470 - 18980401
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccac 89  Q
    ||||| || ||||| ||||||||||||||  ||||| | ||||||||||||||||||||| |||||||||    
T  18980470 ttaatgtgcacacctttttgtaccactctgcaaaatctaagttaactaaatatatggtctatgtgaccac 18980401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 24386405 - 24386312
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||| |||||| || ||| |||||| || |||||||| ||||||| ||||||||||||| ||||||||||| || |  ||||||||| |||||    
T  24386405 ttaatgtgtacatccctttataccacgctgaaaaatttaagttaaccaaatatatggtctgtgtgaccacatattttttgttgcgtgatcacta 24386312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 2835140 - 2835060
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| |||||||| ||||||| |||||||   ||| |||||||||||||| | ||||| || ||||||||||    
T  2835140 tttgtaccactctgaaaaatttaagttaaccaaatataccatctgtgtgaccacatttttttagttgtgtaaccactattt 2835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 2365704 - 2365649
Alignment:
Q  55 tttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgacca 110  Q
    ||||||||||| ||||||||||| |  ||||||||||||| |||||||||||||||    
T  2365704 tttcagttaaccaaatatatggtatgcgtgaccacattttttcagttgcgtgacca 2365649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 9068314 - 9068395
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgc 103  Q
    ||||||| ||||||||||  |||||||||| ||||| ||||||||| || |||||||||| | |||||||||||| ||||||||    
T  9068314 ttaatatatacacccttta-taccactctcgaaaatatcagttaaccaagtatatggtctgtatgaccacatttt-tcagttgc 9068395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 2430553 - 2430618
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||||||||||||||||||||||| ||| ||||||||  |||| | |||||| ||||||||||||    
T  2430553 aaaaatttcagttaactaaatatatgatctgtgtgacca-ttttttttagttgcatgaccactattt 2430618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 7706996 - 7706935
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccac 111  Q
    ||||||||||||||||||||||||| |||| ||| || ||||||| | ||||||| ||||||    
T  7706996 aaaaatttcagttaactaaatatatagtctgtgtaactacatttttttagttgcgagaccac 7706935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 2430568 - 2430498
Alignment:
Q  247 gttaactgaaattttt-cagaatagtacaaatgaatgtacatatcattaagggtgcctacctatcattgctctt 319  Q
    |||||||||||||||| |||||| ||||||| |||||||||   ||||||||||| ||||||||| || |||||    
T  2430568 gttaactgaaattttttcagaatggtacaaaggaatgtaca---cattaagggtgtctacctatcgttactctt 2430498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 11108133 - 11108067
Alignment:
Q  244 ttggttaactgaaatttttcagaatagtacaaatgaatgtacatatcattaagggtgcctacctatcatt 313  Q
    |||||||| |||||||||||||| |||||||| ||||||||||   ||||||| ||| ||||||| ||||    
T  11108133 ttggttaattgaaatttttcagagtagtacaagtgaatgtaca---cattaagagtgtctacctaccatt 11108067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 14524091 - 14524142
Alignment:
Q  65 ctaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||||| |||||||||||| | | || ||||||||||||||||    
T  14524091 ctaaatatatggtctgtgtgaccacattgtttaaggtgcgtgaccactattt 14524142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 22608558 - 22608461
Alignment:
Q  19 tttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaa---tatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    |||||||||||||||| |||||| || | | |||| ||||||||||| |||   |||||| ||| |||||||| ||| | | ||||||||||||||||    
T  22608558 tttaatatgtacacccctttgtatcattttgaaaattttcagttaaccaaatattatatgatctgtgtgaccatattgttttagttgcgtgaccacta 22608461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 2835108 - 2835181
Alignment:
Q  244 ttggttaactgaaatttttcagaatagtacaaatgaatgtacatatcattaagggtgcctacctatcattgctcttt 320  Q
    |||||||||| |||||||||||| | ||||||||  || ||||   |||||||| || |||||||||||||||||||    
T  2835108 ttggttaacttaaatttttcagagtggtacaaattgatataca---cattaaggctgtctacctatcattgctcttt 2835181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 3222610 - 3222532
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactat 114  Q
    |||||| |||||| |||||  | ||||||  ||||||||||||| ||||||||||||||   |||| ||||||||||||    
T  3222610 tttgtatcactctaaaaaagattagttaatcaaatatatggtctgtgtgaccacatttttctagttacgtgaccactat 3222532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 20084783 - 20084729
Alignment:
Q  35 ttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccac 89  Q
    |||||||||| |||  ||||| | ||||||||||||||||||||| |||||||||    
T  20084783 ttttgtaccattctgcaaaatctaagttaactaaatatatggtctatgtgaccac 20084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 15341484 - 15341435
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| ||||| |||||||| | || ||||||||||||||||    
T  15341484 aaatatatggtctgtgtgaacacattttttaagatgcgtgaccactattt 15341435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 15341907 - 15341858
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| |||||||||||||| | || || |||||||||||||    
T  15341907 aaatatatggtctgtgtgaccacattttttaaggtgtgtgaccactattt 15341858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 20084596 - 20084689
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||| |||||| || ||| |||||  || |||||||| ||||||| ||||||||||| | ||||||||||| || |  ||||||||| |||||    
T  20084596 ttaatgtgtacatccctttataccatgctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatattttatgttgcgtgatcacta 20084689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 20084678 - 20084735
Alignment:
Q  152 gcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    |||||| ||||| ||||||| ||||||||||||||||||||  ||| ||| |||||||    
T  20084678 gcgtgatcactactttttcacttagttaaccaaataaattcaaaaataatagtggtca 20084735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 24386203 - 24386272
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccac 89  Q
    ||||| |||||||| |||| |||||||||   ||||   ||||||||||||||||||||| |||||||||    
T  24386203 ttaatgtgtacacctttttataccactctgccaaatccaagttaactaaatatatggtctatgtgaccac 24386272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 7706862 - 7706926
Alignment:
Q  152 gcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||||||||| || |||  ||||||||||| ||||| |||||| || |||| ||||||    
T  7706862 gcgtgaccactatttttccacttaagtaaccaaataagttctggaaaaatagttgtcacgcaact 7706926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7915615 - 7915675
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactct-caaaaatttcagttaactaaatatatggt 77  Q
    ||||||| |||||||||||||||| ||||||  |||||||||||||||  |||||| ||||    
T  7915615 ctttaatgtgtacacccttttgtatcactctgaaaaaatttcagttaatcaaatatgtggt 7915675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 24386323 - 24386283
Alignment:
Q  152 gcgtgaccactattttttcatttagttaaccaaataaattc 192  Q
    |||||| ||||| ||||||| ||||||||||||||||||||    
T  24386323 gcgtgatcactactttttcacttagttaaccaaataaattc 24386283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 38607017 - 38606828
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||| ||||||| |||||| ||||||||||||||||| ||||||||| |  ||||||||||||| |||||||||| |||||||||||||    
T  38607017 ttaatgtgtacacccctttgtacaactctccaaaatttcagttaactacatatatggtttgcgtgaccacattttttcagttgcgttaccactatttaga 38606918  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||| ||| || |||||||    
T  38606917 agctgaaaaatgtggtcacgcaacgaaaatgcgtgtgaccactatttttccacttagttaaccaaataaattctggaaacatagtggtca 38606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 26 - 216
Target Start/End: Complemental strand, 5322145 - 5321955
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctga 125  Q
    ||||||| | |||||| ||||||||||||||||| ||||| ||||||||||||| ||||| |||||||| ||| |||||||| || ||||||||||||||    
T  5322145 tgtacactcctttgtatcactctcaaaaatttcaattaaccaaatatatggtctgtgtgatcacattttttcaattgcgtgatcattatttagaagctga 5322046  T
Q  126 aaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||| ||||||    
T  5322045 aaaatatgatcacgcaactaaaatgcgcgtgaccactatttttccacttagttaaccaaataaattctaaaaaaatagtggtcacgcaact 5321955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 1251665 - 1251470
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| | | || ||||||||||| |||||||||||||||||||||| |    
T  1251665 ttaatgtgtacacccatttgtaccactctcgaaaatttcagttaactaaatatatgatttgtgagaccacattttttcagttgcgtgaccactatttaaa 1251566  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    | |||||||||||| ||| | |||||||||| ||| ||||||||||||  || ||||||||||||||||||| || |||||| ||||||| ||||||    
T  1251565 acctgaaaaatgtgatcatg-aactaaaatgtgcgcgaccactattttcccacttagttaaccaaataaattatggaaaaatagtggtcacgcaact 1251470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 31273751 - 31273555
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| |||| ||| ||||||||||||||| ||||||||| ||||  ||||||||||||| |||| |||||| || |||||||||||||| |||||||||    
T  31273751 ttaatgtgtatacctttttgtaccactctcgaaaatttcaattaatcaaatatatggtctatgtggccacatgttttcagttgcgtgacccctatttaga 31273652  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||| |||||| ||| ||||||||| ||||| | ||||||||||| | ||||||||||||||||||| ||||||||||| ||| ||||||    
T  31273651 agctgaaaaatatggtcatgcagctaaaatgcacgtgaacgctattttttcactaagttaaccaaataaattcttaaaaaatggtgatcacgcaact 31273555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 5573706 - 5573879
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctga 125  Q
    |||||||||||||||| || |||| || |||||||||||| ||||||||| | | |||||| ||||||| ||| |||||||||||||||||||||| |||    
T  5573706 tgtacacccttttgtatcattctcgaacatttcagttaaccaaatatatgatatatgtgactacattttttcaattgcgtgaccactatttagaagttga 5573805  T
Q  126 aaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaa 199  Q
    |||||||||||| | ||||||||||| |||||||||||||||| || ||||||||||||||||||| |||||||    
T  5573806 aaaatgtggtcatggaactaaaatgcacgtgaccactatttttccacttagttaaccaaataaattttgaaaaa 5573879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 29367248 - 29367076
Alignment:
Q  15 tcactttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactat 114  Q
    |||| ||||| ||||||||| || ||| ||||||  ||||||| | ||||||||||||||||||| ||| |||| ||||| ||| ||| |||||||||||    
T  29367248 tcaccttaatgtgtacacccctt-gtatcactcttgaaaattttaattaactaaatatatggtctatgtaaccatattttttcaattgtgtgaccactat 29367150  T
Q  115 ttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataa 188  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  29367149 tttgaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatttttccacttagttaaccaaataa 29367076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 15714847 - 15714688
Alignment:
Q  57 tcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtg 156  Q
    ||||||||||||||||||||||| ||| |||||||||| |||| || ||||| |||||||| |||||||||||| |||||||| ||||||||||  ||||    
T  15714847 tcagttaactaaatatatggtctgtgtaaccacattttttcagctgtgtgactactatttaaaagctgaaaaatatggtcacgtaactaaaatgtccgtg 15714748  T
Q  157 accactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||||||||| || |||||||||||||||||||  |||||||| ||||||| ||||||    
T  15714747 accactatttttccacttagttaaccaaataaatttcgaaaaaatagtggtcacgcaact 15714688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 26493507 - 26493347
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggt 135  Q
    ||||||||||| | |||||||||| ||||| ||||||||  | | ||||| |||||||| ||||||| || || ||||||||||||||||||||||||||    
T  26493507 tttgtaccacttttaaaaatttcaattaaccaaatatat--tttgtgtgatcacattttttcagttgtgtaactactatttagaagctgaaaaatgtggt 26493410  T
Q  136 cacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaa 199  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  26493409 cacgcaact-aaatgcgcgtgacaactatttttccatttagttaatcaaataaattctgaaaaa 26493347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 31596715 - 31596894
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||||||||||||  ||||||||||| | ||||||| |||||||  ||||||||||| | |||||||||||||| |||||||||| |||||||||||||    
T  31596715 ttaatatgtacacctctttgtaccactttgaaaaattacagttaatcaaatatatggtatgtgtgaccacattttttcagttgcgttaccactatttaga 31596814  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    || |||||||||||||||  ||||| ||||||| || | |||||||||| || ||| ||||||||||||||| || |||||    
T  31596815 agatgaaaaatgtggtcagacaact-aaatgcgtgtaatcactatttttccacttaattaaccaaataaattatggaaaaa 31596894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 1241041 - 1240901
Alignment:
Q  68 aatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatttt 167  Q
    |||||||||| | || ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  1241041 aatatatggtgtgtgagaccatattttttcagttgtgtgaccactatttagaagctgaaaaatgtggtcatg-aactaaaatgtgcgtgaccactatttt 1240943  T
Q  168 ttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
      || ||||||||||||||||||| || |||||| |||||||    
T  1240942 cccacttagttaaccaaataaattatggaaaaatagtggtca 1240901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 33286137 - 33286263
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||| |||||||| |||| ||||| || | ||||| |||||||||||||  ||||||||||||| ||| ||||||||||||| ||||||    
T  33286137 ttaatgtgtacacccatttgtacccctctaaaaaaatttaattaaccaaatatatggtctgcgtgaccacattttttcaattgcgtgaccactttttaga 33286236  T
Q  120 agctgaaaaatgtggtcacgcaactaa 146  Q
    |||||||||||||||||||||||||||    
T  33286237 agctgaaaaatgtggtcacgcaactaa 33286263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 15714608 - 15714706
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||| | | |||||||||||||| | |||||||||||||||||||    
T  15714608 ctttaatatgtacacatttttgtaccactctgaaaaatttcagttagctaaatatatgatttatgtgaccacattttgttagttgcgtgaccactattt 15714706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 15233136 - 15233318
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt- 116  Q
    ||||||| |||||| |  || |||||| ||| |||||||||||||||  ||||||||||||| || || |||||||| |||||| ||||||||||||||     
T  15233136 ctttaatgtgtacatctcttcgtaccaatctgaaaaatttcagttaatcaaatatatggtctctgcgatcacatttt-tcagttacgtgaccactatttt 15233234  T
Q  117 ----------agaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
              | ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  15233235 tccagcatttaaaagttgaaaaacgtggtcacgcaactaaaatgcgcatgaccactattttttcacttaattaaccaaataaat 15233318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 5573976 - 5573877
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatat-ggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||| | | |||||||||||||||||    
T  5573976 ctttaatgtgtacactcttttgtaccactctaaaagatttcagttaactaaatatatatgtctttgtgaccacatttttttaattgcgtgaccactattt 5573877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 38606754 - 38606837
Alignment:
Q  31 acccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactat 114  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||| ||||| | || ||||||||||||||    
T  38606754 acccctttgtaccactctgaaaaatttcagttaactaaatatatggtatgtgtgaccatatttttttagctgcgtgaccactat 38606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 32959541 - 32959635
Alignment:
Q  81 tgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcattta 175  Q
    ||||| |||||||| ||| || ||||||||| ||| ||||||| |||||| ||||||| ||||||||||| | ||||||||||||||| ||||||    
T  32959541 tgtgatcacattttttcaattacgtgaccaccattaagaagctaaaaaatatggtcacacaactaaaatgtgtgtgaccactatttttccattta 32959635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 24576248 - 24576180
Alignment:
Q  21 taatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccac 89  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||    
T  24576248 taatgtgtacacccctttgtaccactctcgaaaatttcaattaaccaaatatatggtctgtgtgaccac 24576180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 24576023 - 24575907
Alignment:
Q  84 gaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaacca 183  Q
    ||||||||||| | |||| ||| |||||||||||||||||||||||||||  ||| |         ||  |||||||||||||||||| ||| |||||||    
T  24576023 gaccacattttttgagtttcgttaccactatttagaagctgaaaaatgtgaccacac---------gcaagtgaccactattttttcacttatttaacca 24575933  T
Q  184 aataaattctgaaaaaatggtggtca 209  Q
    ||||||||||| |||||| |||||||    
T  24575932 aataaattctggaaaaatagtggtca 24575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 6809804 - 6809895
Alignment:
Q  109 cactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    ||||||||| ||| | ||||||||||| || | |||||||| |  ||||||||||||||| |||||| ||||||||||||||| ||| ||||    
T  6809804 cactatttaaaagataaaaaatgtggttactcgactaaaatacatgtgaccactatttttccatttaattaaccaaataaattatgagaaaa 6809895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 28700058 - 28700133
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    ||||||| |||||| | ||||||| || ||| |||||||||||||||||||||||||||| | |||||||| |||||    
T  28700058 ctttaatgtgtacatcattttgtatcattctaaaaaatttcagttaactaaatatatggt-tatgtgaccatatttt 28700133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 5321907 - 5321973
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||| ||| |||||| |||||||||||  | |||||||||||||| | |||||||||||||||||||    
T  5321907 aaaattttgagttaattaaatatatggcatgtgtgaccacatttttttagttgcgtgaccactattt 5321973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 15233395 - 15233314
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatc-agttgcgtgaccactattta 117  Q
    ||||||||||||| |||||||| |||||| ||||||||| || | |||||||||| |||||| || ||| |||||||||||||    
T  15233395 tttgtaccactctgaaaaattttagttaattaaatatatagtttgtgtgaccaca-tttatctaggtgcttgaccactattta 15233314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 40502224 - 40502175
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| |||||||||||||| | || ||||||||||||||||    
T  40502224 aaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactattt 40502175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 24919710 - 24919659
Alignment:
Q  65 ctaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||| ||| |||||||||||||| | || ||||||||||||||||    
T  24919710 ctaaatatatgttctctgtgaccacattttttaaggtgcgtgaccactattt 24919659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 24919925 - 24919871
Alignment:
Q  62 taactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||| ||||||||| ||| |||||||||||||| | || ||||||||||||||||    
T  24919925 taaccaaatatatgttctgtgtgaccacattttttaaggtgcgtgaccactattt 24919871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 26493252 - 26493342
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgacca 110  Q
    ||||| |||||||  |||| ||||||| | |||||||| | ||||  ||||||||||||| |||||||||||| | | ||||||| |||||    
T  26493252 ttaatgtgtacacttttttataccactttaaaaaattttacttaatcaaatatatggtctatgtgaccacattgttttagttgcgcgacca 26493342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 24538078 - 24537982
Alignment:
Q  112 tatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    |||||||||||| |||||| |||||| | ||||  || ||| || |||||||||||| ||| | |||||||||||||||| || |||| | |||||||    
T  24538078 tatttagaagct-aaaaatatggtcatgtaactgcaacgcgtgttaccactatttttccatatggttaaccaaataaattttggaaaattagtggtca 24537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 40502436 - 40502387
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| |||||||||||||| | || || |||||||||||||    
T  40502436 aaatatatggtctgtgtgaccacattttttaaggtgtgtgaccactattt 40502387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 26914631 - 26914702
Alignment:
Q  44 actctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| |||||||| || |||||||||||||| | | ||||| |||||||| | |||| ||||||||||||||    
T  26914631 actctgaaaaatttaagctaactaaatatatgatttgtgtgatcacatttt-ttagttacgtgaccactattt 26914702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 31303373 - 31303569
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| |||||| || |||||| |||||| |||||||||||| ||| ||||| |||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  31303373 ttaatgtgtacatccatttgtatcactctgaaaaatttcagtcaaccaaatacatggtctgcgtgaccacattttttcaattgcgtgaccactatttaga 31303472  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||| || ||||||| ||||||    
T  31303473 agctgaaaaatgtggtcatgcaactaaaatgtgcgtgaccactatttttccacttagttaaccaaataaattctggaaacatagtggtcacgcaact 31303569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 20556710 - 20556866
Alignment:
Q  44 actctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaac 143  Q
    |||||| ||||||||||||||| ||||||||||||  |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20556710 actctcgaaaatttcagttaaccaaatatatggtcggtgtgaccatattttttcagttgtgtgaccactatttagaagctgaaaaatgtggtcacgcaac 20556809  T
Q  144 taaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    |||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||    
T  20556810 taaaatacgcgtgaccaatatttttccacttagttaaccaaataaattctgaaaaaa 20556866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 4290745 - 4290942
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| || |||||  ||||||||||||| || || || | ||||||| ||||||||| | | |||||||||||| ||||||| ||||||||||||||    
T  4290745 ctttaatgtgcacacctgtttgtaccactctaaacaaatttaattaactagatatatggtttatctgaccacattttttcagttgagtgaccactattta 4290844  T
Q  118 gaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||| |||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| ||||||    
T  4290845 gaagttgaaaaatgtggtcacgcaact-aagtgtgcgtgaccactatttttccacttagttaaccaaataaattctgaaaaactagtggtcacgcaact 4290942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 18312753 - 18312942
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctga 125  Q
    |||| |||| |||||||||||||| ||||||||| ||||  ||||||||||||| ||||||||||| || |||||||||| || |||||||||||||||     
T  18312753 tgtatacccctttgtaccactctcgaaaatttcaattaatcaaatatatggtctctgtgaccacatattttcagttgcgtcactactatttagaagctg- 18312851  T
Q  126 aaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||||| |||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||||  |||||| ||||||| ||||||    
T  18312852 aaaatgtgctcacgcaactaaaatgcatgtgaccactatttttccacttagttaacctaataaattcttgaaaaatagtggtcacgcaact 18312942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 21548371 - 21548568
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||||| |||||   |||||||||||||  ||||||||||||||  ||| ||||||| | |||||||| ||||| ||||||| ||||||| ||||||    
T  21548371 ctttaatatatacacttctttgtaccactcttgaaaatttcagttaatcaaa-atatggtatgtgtgaccatattttttcagttgtgtgaccaatattta 21548469  T
Q  118 gaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
     ||||||||||||||||||||||||||  ||||||||| |||||| ||||| || |||||||||||||||||||||| |||||| ||||||| ||||||    
T  21548470 aaagctgaaaaatgtggtcacgcaactcgaatgcgcgtaaccactgtttttccacttagttaaccaaataaattctggaaaaatagtggtcacgcaact 21548568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 21589590 - 21589739
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattt 166  Q
    |||||||| |||| |||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  21589590 aaatatattgtctatgtgaccatattttttcagttgtgtgatcactatttagaagctgaaaaatgtggtcatgcaactaaaatgcgtgtgaccactattt 21589689  T
Q  167 tttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    || || ||| |||| ||||||| ||||| |||||| ||||||||||||||    
T  21589690 ttccacttaattaatcaaataagttctggaaaaatagtggtcatgcaact 21589739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 209
Target Start/End: Complemental strand, 15958485 - 15958313
Alignment:
Q  38 tgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtca 137  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||| |||||||||||||||||||||||||||||    
T  15958485 tgtaccactctgtaaaatttcagttaactaaatatatggtctgtgtgaccacatttt-taagttgcatga-cactatttagaagctgaaaaatgtggtca 15958388  T
Q  138 cgcaactaaaatgcgcgtgaccac----tattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    ||||| | ||||| |||||| |||    | |||||| | ||| ||||||||||||||||||||||||| |||||||    
T  15958387 cgcaa-ttaaatgtgcgtgatcacaatttttttttttacttatttaaccaaataaattctgaaaaaatagtggtca 15958313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 5083982 - 5083792
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| | ||||||| ||||||  | |||| ||||||||| || |  ||||||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  5083982 ctttaatgtatacacccctttgtattattctcgaaaatttcaattcatcaaatatatggtatgtgtgaccacattttttcaattgcgtgaccactattta 5083883  T
Q  118 gaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    |||| |||||||| ||||||||||||| ||||||| |||||||||||||||  | || |||||| |||||||||||  |||||| |||||||    
T  5083882 gaagttgaaaaatatggtcacgcaact-aaatgcgggtgaccactatttttcaactttgttaacgaaataaattctagaaaaatagtggtca 5083792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 22740817 - 22740654
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttat-cagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaat 149  Q
    ||||||||| |||||||||||||| || | ||| |||||||||| | |||||| ||||||| |||||| |||||||||||| ||||||||||||||||||    
T  22740817 aaaatttcaattaactaaatatatagtttgtgtaaccacatttttttcagttgtgtgacca-tatttaaaagctgaaaaatatggtcacgcaactaaaat 22740719  T
Q  150 gcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaa 214  Q
      |||||| || ||||||| || ||||||||||||||||||||||||||||| || |||| ||||    
T  22740718 atgcgtgatcattatttttccacttagttaaccaaataaattctgaaaaaatagtagtcacgcaa 22740654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 28805094 - 28804990
Alignment:
Q  104 gtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatgg 203  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| || ||||||||||||||||||| || ||| || |    
T  28805094 gtgatcactatttagaagctgaaaaatgtggtcacacaaccaaaatgcgcg-gaccactatttttccacttagttaaccaaataaattatggaaatatag 28804996  T
Q  204 tggtca 209  Q
    ||||||    
T  28804995 tggtca 28804990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 32964947 - 32964848
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| | |||||||||||||| |||||| |||||||| ||||||||| ||||||||||| ||||||||||| || | ||||||||||||||||||||    
T  32964947 ctttaatgtatacacccttttgtatcactctaaaaaatttaagttaactatatatatggtctgtgtgaccacatatttttagttgcgtgaccactattta 32964848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 28804902 - 28804976
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||| ||||||||||||| ||||||||||||||    
T  28804902 ttaatatgtacacccttttgtaccattctagaaaatttcagttaaccaaatatatggtctatgtgaccacatttt 28804976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 21589817 - 21589721
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| |||||| || ||| ||||||||| |||||||||||||| | ||||||||||||| |||||||||||||| | |||||| ||||||||||||    
T  21589817 ttaatgtgtacatccgtttataccactctaaaaaatttcagttatccaaatatatggtctgtgtgaccacatttttttagttgcatgaccactattt 21589721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 32964694 - 32964852
Alignment:
Q  41 accactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt----------agaagctgaaaaat 130  Q
    |||||||| || ||||| ||||||||||||||||||| | |||||||| ||||| ||| ||| |||||||||||||          ||||||||||||||    
T  32964694 accactctaaagaatttaagttaactaaatatatggtatgtgtgaccatatttt-tcaattgtgtgaccactattttccagcatttagaagctgaaaaat 32964792  T
Q  131 gtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
     |||||| | ||||||||||| |||||||||||||||| || ||| |||||| |||||||    
T  32964793 atggtcatgtaactaaaatgcacgtgaccactatttttccacttaattaacctaataaat 32964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 46943839 - 46943761
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatt--ttttcatttagttaaccaaataaat 190  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  46943839 atttagaagctgaaaa-tgtgatcacgcaactaaaatgcgcgtgaccactattttttttcacttagttaaccaaataaat 46943761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 22033238 - 22033158
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||| ||| |||||||| ||||||| ||||||||||||| |||||||| ||||| | |||||||||||||||||||    
T  22033238 tttgtaccattctgaaaaattttagttaaccaaatatatggtctgtgtgaccatattttttgagttgcgtgaccactattt 22033158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 28805212 - 28805116
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| |||| |||| |||||| |||||| |||||||| ||||||| ||||||||||| | |||||||||||||| |||||||||||| ||| ||||    
T  28805212 ttaatgtgtatacccctttgtatcactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacattttttcagttgcgtgatcacgattt 28805116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 31303648 - 31303553
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactat 114  Q
    ||||||| | |||| |||||| ||||||||  |||||||||||||||| ||||||||||| | |||||||||||||| | |||||||||||||||||    
T  31303648 ctttaatgtctacatccttttataccactcaaaaaaatttcagttaacaaaatatatggtatgtgtgaccacatttt-ttagttgcgtgaccactat 31303553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 21548629 - 21548550
Alignment:
Q  37 ttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||||| || ||||  | |||||||||||||||||||    
T  21548629 ttgtaccattctaaaaaatttcagttaactaaatatatggtctgtgtgatcatatttgtttagttgcgtgaccactattt 21548550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 5083738 - 5083803
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||||||||||||  |||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  5083738 aaaaatttcagttaatcaaatatatggtctttgtgaccacatttt-ttagttacgtgaccactattt 5083803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 5174910 - 5174975
Alignment:
Q  144 taaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    ||||||| ||||||||||||||||| || |||||||| |||||||||||||||||| | |||||||    
T  5174910 taaaatgtgcgtgaccactatttttacacttagttaatcaaataaattctgaaaaattagtggtca 5174975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 18313004 - 18312924
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| ||||||||||| |||| ||||||||||| | |||| | | ||||| | |||||||||||||||||||    
T  18313004 tttgtaccactctgaaaaatttcagctaaccaaatatatggtttgtgtggctaaatttttttagttgcgtgaccactattt 18312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 20556963 - 20556867
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||||| |||| | |||||| |||| | |||| |||||||||||||||||||| |||| | |||||||||||| |  |||| |||||||||||||    
T  20556963 ttaatatgcacactcctttgtatcactttgaaaattttcagttaactaaatatatagtctgtttgaccacatttttttggttgagtgaccactattt 20556867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 27523583 - 27523496
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa 200  Q
    |||||||| ||||||||  ||||||  ||| ||||||| || |||| ||||||||| || ||| ||||||||||||||||||||||||    
T  27523583 atttagaaactgaaaaacatggtcatacaattaaaatgtgcttgactactatttttccacttaattaaccaaataaattctgaaaaaa 27523496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 2887230 - 2887188
Alignment:
Q  106 gaccactatttagaagctgaaaaatgtggtcacgcaactaaaa 148  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  2887230 gaccactatttagaagctgaaaaatgtggttacgcaactaaaa 2887188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 15958258 - 15958324
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||||| ||||||| ||||||||||||  |||||||||||||| | ||||| |||||||||||||    
T  15958258 aaaaatttaagttaaccaaatatatggtcagtgtgaccacatttttttagttgtgtgaccactattt 15958324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 22032996 - 22033054
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    |||||||||||||  ||||||| ||||||| ||||||||||| | ||||||||||||||    
T  22032996 tttgtaccactctttaaaatttaagttaaccaaatatatggtatgtgtgaccacatttt 22033054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 4291004 - 4290927
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||||| ||| | |||||||||||||||| ||||| ||| ||| | ||||||| |||| | ||||||||||||||||    
T  4291004 tttgtactactttgaaaaatttcagttaaccaaataaatgatctgtatgaccacgtttttttagttgcgtgaccacta 4290927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 22740076 - 22740150
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    ||||| ||||||||  | |||| |||||| ||| |||| ||||||  ||||||||||||| ||||||||||||||    
T  22740076 ttaatgtgtacacctctatgtatcactctgaaatatttaagttaatcaaatatatggtctgtgtgaccacatttt 22740150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 28804950 - 28804882
Alignment:
Q  244 ttggttaactgaaatttttcagaatagtacaaatgaatgtacatatcattaagggtgcctacctatcattgc 315  Q
    ||||||||||||||||||  ||||| ||||||| |  |||||||   |||||||||| ||||||||||||||    
T  28804950 ttggttaactgaaattttctagaatggtacaaaagggtgtacat---attaagggtgtctacctatcattgc 28804882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 22033151 - 22033095
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatttttt 169  Q
    |||||||| |||||||||  || ||| ||||||||||| ||| ||||||||||||||    
T  22033151 atttagaaactgaaaaatacgggcacacaactaaaatgtgcgggaccactatttttt 22033095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 13312517 - 13312714
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||| ||||||||||||||||| | | || ||||||||| ||||| ||||||||||||| ||||| |||||||| ||||||| |||||| |||||||    
T  13312517 ctttaatgtgtacacccttttgtactattttcgaaaatttcaattaaccaaatatatggtctatgtgaacacatttt-tcagttgggtgaccgctattta 13312615  T
Q  118 gaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||| || |||||| ||||||| ||||||    
T  13312616 gaagctgaaaaatgtggtcacgcaactaaaatgcgcgtggcaactatttttccacttagttaaccaaataaattatggaaaaatagtggtcacgcaact 13312714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 35922718 - 35922848
Alignment:
Q  86 ccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaa 185  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  35922718 ccacattttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgtatgaccactatttttccatttagttaaccaaa 35922817  T
Q  186 taaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||||||||||||| ||||||||||||||    
T  35922818 taaattctgaaaaaatagtggtcatgcaact 35922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 22169377 - 22169573
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| |||||||||| ||||| || | |  ||||||||||||||||||||||||||  | ||||| |||||||| |||||||||||||||||||||| |    
T  22169377 ttaatgtgtacaccctattgtatcatttttgaaaatttcagttaactaaatatatggaatatgtgatcacattttttcagttgcgtgaccactatttata 22169476  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||| |||||||||  |||||| ||||||    
T  22169477 agttgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatttttcaacgtagttaaccaaataaattttgaaaaaataatggtcacgcaact 22169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 38522115 - 38521984
Alignment:
Q  61 ttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgacca 160  Q
    ||||| ||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  38522115 ttaaccaaatatatggtctatgtgaccacattttttcaattgcatgaccactatttagaagctgaaaaatgtggtcacgcga-taaaatgcgcgtgacca 38522017  T
Q  161 ctattttttcatttagttaaccaaataaattct 193  Q
    |||||||| || ||||||||| |||||||||||    
T  38522016 ctatttttacacttagttaactaaataaattct 38521984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 43461858 - 43461709
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatg 150  Q
    ||||||||||||||  |||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||| ||||||||  |||||||||||||||||     
T  43461858 aaaatttcagttaatcaaatatatggtctttg-gaccatattttttcagttgtgtgaccactatttagaagttgaaaaatacggtcacgcaactaaaatt 43461760  T
Q  151 cgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaat 201  Q
    | ||| |||||||||||| || ||||| |||||||||||||||||||||||    
T  43461759 cacgtaaccactatttttccacttagtaaaccaaataaattctgaaaaaat 43461709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 40 - 213
Target Start/End: Complemental strand, 33959148 - 33958976
Alignment:
Q  40 taccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacg 139  Q
    ||||| |||| |||| |||||||||| ||||||||  ||| |||||  ||||||| |||| |||||||||||||||||||| ||||||||| ||||||||    
T  33959148 taccattctcgaaaacttcagttaacaaaatatata-tctatgtgattacattttttcagctgcgtgaccactatttagaaactgaaaaatatggtcacg 33959050  T
Q  140 caactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgca 213  Q
    |||||||||| || || |||||||||||| || |||||| ||||||||||||||| |||||| |||||||||||    
T  33959049 caactaaaatccgagtaaccactatttttccacttagttgaccaaataaattctggaaaaattgtggtcatgca 33958976  T

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Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 201
Target Start/End: Complemental strand, 19621655 - 19621481
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt----agaag 121  Q
    ||||||| | ||||||||| ||| |||||||||||||||| ||||||||||| | ||||||||||||||  || |||||||||||||||||    ||||     
T  19621655 tgtacactcctttgtaccattctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacatttttccatttgcgtgaccactatttttccagaa- 19621557  T
Q  122 ctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaat 201  Q
        |||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  19621556 ----aaaacgtggtcacgcaactaaaatgtgcgtgaccactatttttccacttagttaaccaaataaattctggaaaaat 19621481  T

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Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 42034739 - 42034872
Alignment:
Q  81 tgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaa 180  Q
    |||||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  42034739 tgtgaccacatttt-tcagttgcgtgactcctatt-agaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactatttttccacttagttaa 42034836  T
Q  181 ccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||| || |||| | ||||||| ||||||    
T  42034837 ccaaataaattttggaaaactagtggtcacgcaact 42034872  T

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Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 31189494 - 31189671
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttat--cagttgcgtgaccactatt 115  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| || | ||||||||||||||    || |||| |||  ||||||    
T  31189494 ctttaatatgtacaacattttgtaccactctcgaaaatttcagttaaccaaatatatagtatgtgtgaccacatttttgtccaattgcatgattactatt 31189593  T
Q  116 tagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctg 194  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||| |||| || || ||||| |||||||||||||    
T  31189594 tagaagctgaaaaatgtgatcacgcaactaaaatgtttgtgaccacta-ttttccacttggttaatcaaataaattctg 31189671  T

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Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 36169501 - 36169394
Alignment:
Q  41 accactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgc 140  Q
    |||||||||||||||||||| | |  ||||||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||    
T  36169501 accactctcaaaaatttcagctgatcaaatatatggtatgtgtgaccacattctttcagttgcgtgaccactatttagaagctgaaaaatatggtcacgc 36169402  T
Q  141 aactaaaa 148  Q
    ||||||||    
T  36169401 aactaaaa 36169394  T

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Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 43262889 - 43262708
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt--- 116  Q
    ||||| ||||||||| ||||||| ||| | |||||||||||||||| ||||||||||||| |||||||||||||  | ||||  ||||| |||||||       
T  43262889 ttaatgtgtacacccctttgtactactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacatttgtttagttatgtgactactatttttc 43262790  T
Q  117 --------agaagctgaa---aaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaata 187  Q
            | ||||||||   |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  43262789 caacatttaaaagctgaagaaaaatgtggtcacacaactaaaatgcgcgtgaccactatttttccacttagttaaccaaata 43262708  T

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Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 15221760 - 15221662
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||| ||||||| | |||||| || ||| |||||||||||||||||||||||||||||| |||||||||||||| | | ||| |||||||||||||    
T  15221760 ctttaatgtgtacactcctttgtatcattctgaaaaatttcagttaactaaatatatggtctgtgtgaccacatttttttaattgtgtgaccactattt 15221662  T

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Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 13312778 - 13312696
Alignment:
Q  34 cttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||||| |||||||||||||||| | ||||||| | | |||||||||||||| | |||||||||||||||||||    
T  13312778 cttttgtaccactctgaaaaatttcagttaaccatatatatgatttgtgtgaccacatttttttagttgcgtgaccactattt 13312696  T

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Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 30704476 - 30704398
Alignment:
Q  113 atttagaagctgaaaaa-tgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    ||||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  30704476 atttaaaagctgaaaaaatgtggtcgcacaactaaaatgcgcgtgaccactatttttccacttagttaaccaaataaat 30704398  T

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Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 7155998 - 7156182
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt- 116  Q
    ||||||| |||||| | |||||||||||| |  ||||||||||||||  ||||||||||| | | ||| |||||||| ||||||   ||||||||||||     
T  7155998 ctttaatgtgtacatctttttgtaccactttagaaaatttcagttaatcaaatatatggtttatatgatcacattttttcagttatatgaccactatttt 7156097  T
Q  117 -----------agaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
               ||||||||||||||||| || ||||||||||||  ||||||||| ||||||| || ||| ||||||||||||||    
T  7156098 tttcagaatttagaagctgaaaaatgtgatcgcgcaactaaaatatgcgtgaccattatttttccacttaattaaccaaataaat 7156182  T

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Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 30045885 - 30045940
Alignment:
Q  137 acgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattc 192  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  30045885 acgcaactaaaatacgcgtgaccactatttttccatttaattaaccaaataaattc 30045940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 30704309 - 30704402
Alignment:
Q  24 tatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    |||||||||| ||||||||||||||  ||||||||||||||  |||||||||||||  ||||| || |||  | |||||||||| |||||||||    
T  30704309 tatgtacacctttttgtaccactctgtaaaatttcagttaatcaaatatatggtctccgtgactacgtttatttagttgcgtgatcactattta 30704402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 22169650 - 22169555
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| |||||||||||| |||||||||| |||| ||| ||||||| |||| |||| | | |||||||||||||| | ||||||||||||| |||||    
T  22169650 ttaatctgtacacccttt-gtaccactctgaaaatttttagttaaccaaatttatgatatgtgtgaccacatttttttagttgcgtgaccattattt 22169555  T

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Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 42034952 - 42034857
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    |||||||  ||||| || ||||||||||||| ||||||||||||| |  ||||||||||| | ||| | |||||||| | ||||||||||||||||    
T  42034952 ctttaatgcgtacatccctttgtaccactctaaaaaatttcagttgatcaaatatatggtatgtgtaatcacatttttttagttgcgtgaccacta 42034857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 35922628 - 35922702
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    ||||| |||||| || |||||| |||||| |||||||||||||||  ||||||||||| | ||||||||||||||    
T  35922628 ttaatgtgtacatccctttgtatcactctgaaaaatttcagttaatcaaatatatggtatgtgtgaccacatttt 35922702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 2477302 - 2477370
Alignment:
Q  148 atgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||| |||||||||||  | |||||||||||||||||||||| |||||| |||| || ||||||    
T  2477302 atgcgcgtggccactatttttcgacttagttaaccaaataaattctgtaaaaatagtggccacgcaact 2477370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 33958911 - 33958991
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||| ||| | |||||||| | || ||| ||||||| ||||    
T  33958911 tttgtaccactctgaaaaatttcacttaaccaaatatatggtctatgtaatcacatttttttagctgcatgaccacaattt 33958991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 35922926 - 35922830
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| ||||||||  |||||| |||| | |||||||| ||||||| |||| |||||||| || ||||| ||||| | |||||| ||||||||||||    
T  35922926 ttaatgtgtacaccgctttgtatcactttgaaaaatttaagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 35922830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 31189761 - 31189710
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggt 77  Q
    ||||||||| ||||||||||| | |||||||||||||||| |||||||||||    
T  31189761 tgtacacccctttgtaccactttaaaaaatttcagttaaccaaatatatggt 31189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 36169337 - 36169410
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgacca 110  Q
    ||||||||||| | |||||||| ||||||| |||||||||||   |||||||||||||| | |||||||||||||    
T  36169337 tttgtaccactttgaaaaattttagttaaccaaatatatggtaggtgtgaccacatttt-ttagttgcgtgacca 36169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 15221618 - 15221673
Alignment:
Q  154 gtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    ||||||||| ||||| || ||| ||||| ||||||||||||||||||| |||||||    
T  15221618 gtgaccactctttttccacttaattaactaaataaattctgaaaaaatagtggtca 15221673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 19621613 - 19621655
Alignment:
Q  244 ttggttaactgaaatttttcagaatagtacaaatgaatgtaca 286  Q
    ||||||||||||||||||||||||| ||||||| || ||||||    
T  19621613 ttggttaactgaaatttttcagaatggtacaaaggagtgtaca 19621655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 15221572 - 15221625
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccac 89  Q
    ||||||||| |||| ||||||| ||||||| ||||||||||| | |||||||||    
T  15221572 tttgtaccattctcgaaaattttagttaaccaaatatatggtttgtgtgaccac 15221625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 7156226 - 7156178
Alignment:
Q  69 atatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    ||||||||||  |||||||||||||| | ||||| ||||||||||||||    
T  7156226 atatatggtccgtgtgaccacatttttttagttgtgtgaccactattta 7156178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 216
Target Start/End: Complemental strand, 382 - 202
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggt 135  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  382 tttgtaccactctgaaaattttcagttaaccaaatatatggtctgtgtggccacactttttcagttgcgtgaccactatttagaagctgaaaaatgtggt 283  T
Q  136 cacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||||||||||||||| |||||||||||||| || ||| ||| |||||||| || ||||||| | ||||||| ||||||    
T  282 cacgcaactaaaatgcgcatgaccactatttttccacttacttatccaaataatttttgaaaaattagtggtcacgcaact 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 121 - 217
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctc-aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||||| ||||||   ||||||||||||||  |||||||||||||||| |||||||||| || ||||| |||||| | | ||||||||||||||||    
T  121 ctttaatgtgtacatttttttgtaccactcttgaaaaatttcagttaaccaaatatatggactgtgtgatcacattgttttagttgcgtgaccacta 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 29677263 - 29677078
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||| ||||||||  |||||||||||||||||||||| ||||||  |||||||||||    |||       ||| ||||||| ||||||||||||||||    
T  29677263 ttaatgtgtacacctctttgtaccactctcaaaaatttaagttaaacaaatatatggt----gtg-------tttttcagttgagtgaccactatttaga 29677175  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  29677174 agctgaaaaatgtggtcacgcaactaaaatgtgcgtgaccactatttttccacttagttaaccaaataaattctgaaaaaatagtggtcatgcaact 29677078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 51 - 216
Target Start/End: Original strand, 34490140 - 34490304
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatg 150  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| |||||||  ||||||||||||||||||| ||||||||||||| |||| |||||||    
T  34490140 aaaatttcagttaactaaatatatggtctgtgtgac-acattttttcagttgtatgaccactatttagaagctaaaaaatgtggtcatgcaa-taaaatg 34490237  T
Q  151 cgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaa-tggtggtcatgcaact 216  Q
    ||| ||||||||||||||  | |||||||||||||||||||||||||||| | ||||||| ||||||    
T  34490238 cgcatgaccactatttttctagttagttaaccaaataaattctgaaaaaactagtggtcacgcaact 34490304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 36 - 201
Target Start/End: Original strand, 34364169 - 34364332
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggt 135  Q
    |||||||||||||  ||||||| ||||||||||||||||||||| |||||||| ||||| ||||||||||| ||| |||||||||||||||| |||||||    
T  34364169 tttgtaccactctggaaaatttaagttaactaaatatatggtctgtgtgaccatatttt-tcagttgcgtggcca-tatttagaagctgaaacatgtggt 34364266  T
Q  136 cacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaat 201  Q
    ||| |||||||||||  ||||||||| ||||||||| ||||||||||||| |||||||| ||||||    
T  34364267 cacacaactaaaatgaacgtgaccacaattttttcacttagttaaccaaaaaaattctggaaaaat 34364332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 25238436 - 25238575
Alignment:
Q  59 agttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgac 158  Q
    ||||||||||||||||||||| | ||| || ||||| |||||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||| ||    
T  25238436 agttaactaaatatatggtctatatgatcaaattttttcagttgcgtgaccactatttagaagctaaaaaatgtggtcacgtaa-taaaatgtgcgtaac 25238534  T
Q  159 cactattttttcatttagttaaccaaataaattctgaaaaa 199  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  25238535 cactatttttccacttagttaaccaaataaattctgaaaaa 25238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 29167931 - 29167803
Alignment:
Q  87 cacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaat 186  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||    
T  29167931 cacattttttcagttgcgtgaccactatttagaagctaaaaaatatggtcacgcaa-taaaatgcgcatgaccactatttttccacttagttaaccaaat 29167833  T
Q  187 aaattctgaaaaaatggtggtcatgcaact 216  Q
    |||||| |||||| | ||||||| ||||||    
T  29167832 aaattccgaaaaactagtggtcaggcaact 29167803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 5831448 - 5831648
Alignment:
Q  16 cactttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatt 115  Q
    |||||||||  ||||||||||||||| || ||| |||||||| ||||||||||| ||||||| | ||||| || ||||| |  ||||| |||||||||||    
T  5831448 cactttaatgagtacacccttttgtaacattctgaaaaattttagttaactaaagatatggtatgtgtgatcatattttgtttgttgcatgaccactatt 5831547  T
Q  116 tagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaac 215  Q
    |||||| | |||||| ||||| || ||||||||||||  | ||||| |||||| || |||||||||||||||||||||| |||| | ||||||| |||||    
T  5831548 tagaagttaaaaaatatggtcccgtaactaaaatgcgtattaccacaatttttccacttagttaaccaaataaattctggaaaattagtggtcacgcaac 5831647  T
Q  216 t 216  Q
    |    
T  5831648 t 5831648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 216
Target Start/End: Original strand, 38951840 - 38952023
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttat-cagttgcgtgaccactatttagaagctgaaaaa--tgt 132  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||| ||  |||||||||| | ||| |||||||||||||||||||| ||||||||  | |    
T  38951840 tttgtaccactctcgaaaatttaagttaaccaaatatatggtctatgaaaccacatttttttcagctgcgtgaccactatttagaaactgaaaaaaatat 38951939  T
Q  133 ggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
     |||||||||||||||||||  ||||||||||||||  | ||||||||||||||||||| || | |||| ||||||| ||||||    
T  38951940 agtcacgcaactaaaatgcgtctgaccactatttttctacttagttaaccaaataaattttggagaaatagtggtcaagcaact 38952023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 81 - 201
Target Start/End: Original strand, 42604199 - 42604319
Alignment:
Q  81 tgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaa 180  Q
    |||||||||||||| |||||||| | ||||||||||||||||| |||| | ||||||  ||||||||||||||||||||||||||||| || ||||||||    
T  42604199 tgtgaccacattttttcagttgcatcaccactatttagaagcttaaaagtatggtcatacaactaaaatgcgcgtgaccactatttttccacttagttaa 42604298  T
Q  181 ccaaataaattctgaaaaaat 201  Q
    | |||||||||||||||||||    
T  42604299 cgaaataaattctgaaaaaat 42604319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 517585 - 517421
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggt 135  Q
    |||||| ||||||||||||||| ||||||| ||||||||| | | ||  |||||||||| ||| |||||| ||||||||||||||| | |||||| || |    
T  517585 tttgtatcactctcaaaaatttaagttaaccaaatatatgatatgtgcaaccacatttt-tcaattgcgtaaccactatttagaagttaaaaaatatgat 517487  T
Q  136 cacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaat-aaattctgaaaaaa 200  Q
    |||||||||||||||  | |||| |||||||||| | |||||||||||||| ||||||||||||||    
T  517486 cacgcaactaaaatgaacatgactactattttttaacttagttaaccaaataaaattctgaaaaaa 517421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 5855297 - 5855201
Alignment:
Q  21 taatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattta 117  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||| | |||||||||||||  | ||||||||||||||||||||    
T  5855297 taatatgtacactcttttgtaccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttagttagttgcgtgaccactattta 5855201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 34490382 - 34490289
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||| ||||||||  ||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||| | ||||||||||||||||    
T  34490382 ttaatgtgtacaccactttgtaccactctgaaaaatttcagtttacaaaatatatggtctgtgtgaccacatttttttagttgcgtgaccacta 34490289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 9929951 - 9929834
Alignment:
Q  35 ttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaa-atgtg 133  Q
    |||||||||| | | |||||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||     | ||||| |||||    
T  9929951 ttttgtaccattttgaaaaatttcaattaactaaatatatggtctgtgtgaccacattttttcatttgcgtgaccactattt--tttcagaaaatatgtg 9929854  T
Q  134 gtcacgcaactaaaatgcgc 153  Q
    ||||||||||||||||||||    
T  9929853 gtcacgcaactaaaatgcgc 9929834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 2996025 - 2996101
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaa 189  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || |||||||| |  |||||||||||||||||    
T  2996025 atttagaagctgaaaaatgtggtcacgcaaataaaatgcgcgtggccgctatttttccgcttagttaaccaaataaa 2996101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 190
Target Start/End: Original strand, 9468064 - 9468199
Alignment:
Q  55 tttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcg 154  Q
    ||||||||||| ||||||||||| | |||||||| ||||| |||||||  |||||| |||||| |||||| |||||||| |||| |||||||||||   |    
T  9468064 tttcagttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatgtatg 9468162  T
Q  155 tgaccactattttt-tcatttagttaaccaaataaat 190  Q
    |||| |||||||||  || ||||||||||||||||||    
T  9468163 tgactactatttttgccacttagttaaccaaataaat 9468199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 13350903 - 13350999
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||| ||| |||| |||||||| || | |||||||    
T  13350903 ttaatgtgtacacccttttgtaccactctcgaaaatttcagttaaccaaatatatggtatgtgtgatcacgttttttcagttgcatggctactattt 13350999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 5831720 - 5831633
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    ||||||||| |||||| |||||| |||||||||| ||||| ||||||||||||| |||||||| ||||| | ||||||||||||||||    
T  5831720 tgtacacccctttgtatcactctgaaaaatttcaattaaccaaatatatggtctgtgtgaccatatttttttagttgcgtgaccacta 5831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 13351081 - 13351008
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacat 91  Q
    ||||||| ||||||||| ||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||    
T  13351081 ctttaatgtgtacacccctttgtaccactctgaaaaatttaacttaaccaaatatatggtctttgtgaccacat 13351008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 38244863 - 38244801
Alignment:
Q  52 aaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactat 114  Q
    |||||| ||||| | ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  38244863 aaatttaagttagccaaatatatggtctgtgtgaccacattttttcagttgcgtgaccactat 38244801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 2569960 - 2570024
Alignment:
Q  152 gcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtcatgcaact 216  Q
    ||||||||||||||||| || |||||||||||||||||||||  |||||| ||||||| ||||||    
T  2569960 gcgtgaccactatttttccacttagttaaccaaataaattctagaaaaatagtggtcacgcaact 2570024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 38952085 - 38952005
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||| |||||| |||||||||||||||| |||| |||||| | |||||||| ||||| | |||||| ||||||||||||    
T  38952085 tttgtatcactctgaaaaatttcagttaacaaaatgtatggtatatgtgaccatatttttttagttgcttgaccactattt 38952005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 29167756 - 29167818
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccacta 113  Q
    |||||||||||||||||||||||||||| | |||||||||||||| | |||||| |||||||||    
T  29167756 aaaaatttcagttaactaaatatatggtttgtgtgaccacatttt-ttagttgcctgaccacta 29167818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 5855056 - 5855205
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt-----------agaagctgaaaaatgtggtcac 138  Q
    ||||||||||| |||| ||||||||||||| ||||||||||| || ||||||| |||||||| ||||           | ||||| ||| ||||||||||    
T  5855056 aaaaatttcagctaaccaaatatatggtctgtgtgaccacatattttcagttgtgtgaccacaatttttccaacatttaaaagctaaaatatgtggtcac 5855155  T
Q  139 gcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
     |||||||||| ||  ||||  |||||||| |||||| ||||||||||||||    
T  5855156 acaactaaaatacg--tgacgtctatttttccatttaattaaccaaataaat 5855205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 29676999 - 29677096
Alignment:
Q  18 ctttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||| |||||  || |||||| |||| | |||||||| ||||||| |||||||||| || |||||||||||||| | |||||| ||||||||||||    
T  29676999 ctttaatgtgtacgtccctttgtagcactttgaaaaattttagttaaccaaatatatggcctgtgtgaccacatttt-ttagttgcatgaccactattt 29677096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 25238653 - 25238596
Alignment:
Q  37 ttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacatttt 94  Q
    |||||||||||| |||||||||||||||  ||||||||||| | ||||||||||||||    
T  25238653 ttgtaccactctgaaaaatttcagttaatcaaatatatggtttctgtgaccacatttt 25238596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 2570101 - 2570006
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| |||||||||||| ||||| ||||  ||||||| ||||||| || |||||||| | ||| |||| ||||| | |||||||||||||||||||    
T  2570101 ttaatgtgtacacccttt-gtaccgctctggaaaatttaagttaaccaagtatatggtttgtgttaccatattttttgagttgcgtgaccactattt 2570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 2569876 - 2569974
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccaca--ttttatcagttgcgtgaccactattt 116  Q
    |||||||||||||   ||||||| | ||| |||| |||| |||||| ||||||||||||| |||||| |||  |||| ||| |||||||||||||||||    
T  2569876 ttaatatgtacacttctttgtactattctaaaaattttcggttaaccaaatatatggtctgtgtgactacattttttttcaattgcgtgaccactattt 2569974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 28499724 - 28499662
Alignment:
Q  16 cactttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtc 78  Q
    ||||||||  |||||| | |||||||||| ||| |||||||||||||||| ||||||||||||    
T  28499724 cactttaacgtgtacatcattttgtaccattctaaaaaatttcagttaaccaaatatatggtc 28499662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 24708074 - 24708123
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||||||||||| |||||||||||||| | || ||||||||||||||||    
T  24708074 aaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactattt 24708123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 38245069 - 38245012
Alignment:
Q  59 agttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| ||||||||||||||| ||| |||| ||||| |||| ||||||||||||||||    
T  38245069 agttagctaaatatatggtctatgtaaccagattttttcagctgcgtgaccactattt 38245012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 17227500 - 17227548
Alignment:
Q  67 aaatatatggtctttgtgaccacattttatcagttgcgtgaccactatt 115  Q
    ||||||||||||| |||||||||||||| | || |||||||||||||||    
T  17227500 aaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactatt 17227548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 9929778 - 9929739
Alignment:
Q  162 tattttttcatttagttaaccaaataaattctgaaaaaat 201  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  9929778 tatttttccatttagttaaccaaataaattttgaaaaaat 9929739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 5855250 - 5855322
Alignment:
Q  244 ttggttaactgaaatttttcagaatagtacaaatgaatgtacatatcattaagggtgcctacctatcattgctctt 319  Q
    |||||||||| |||||||||||| | ||||||| || |||||||   ||||  |||| ||||||||||||||||||    
T  5855250 ttggttaacttaaatttttcagagtggtacaaaagagtgtacat---attagtggtgtctacctatcattgctctt 5855322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 9929662 - 9929735
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgacc 109  Q
    |||||||||||||  ||||||| ||||||| ||||||||||| | | |||||||||| | | ||||||| ||||    
T  9929662 tttgtaccactcttgaaaatttaagttaaccaaatatatggtttgtatgaccacattattttagttgcgcgacc 9929735  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 2995928 - 2996003
Alignment:
Q  26 tgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttg 102  Q
    |||||| |||||||||||||| | ||||| || | ||||  ||||||||||| | |||||||||||||| |||||||    
T  2995928 tgtacatccttttgtaccactttgaaaaaatttaattaatcaaatatatggt-tgtgtgaccacattttttcagttg 2996003  T

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Target: scaffold0251 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 10804 - 10623
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttaga 119  Q
    ||||||||||||  | |||||||||||||  ||||||||| ||||| |||||||||||||  ||||| | ||||| | |||||| ||||||||||||| |    
T  10804 ttaatatgtacattcctttgtaccactctagaaaatttcaattaaccaaatatatggtctaggtgactatattttttaagttgcatgaccactatttaaa 10705  T
Q  120 agctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaat 201  Q
    |  | ||||||||||||||||||||||||| | |||||||| ||||||| || ||||||||||||||||||||| |||||||    
T  10704 aaataaaaaatgtggtcacgcaactaaaatacccgtgaccattatttttccacttagttaaccaaataaattctcaaaaaat 10623  T

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Target: scaffold0123 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 209
Target Start/End: Complemental strand, 24195 - 24021
Alignment:
Q  36 tttgtaccactctcaaaaatttcagttaactaaatatatg--gtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtg 133  Q
    |||||| || ||| |||||||||||| |||  ||||||||  |||| |||||| ||||||| |||||||| ||||||||||||||||||| |||||||||    
T  24195 tttgtatcaatctgaaaaatttcagtgaaccgaatatatgtcgtctatgtgactacattttttcagttgcatgaccactatttagaagctaaaaaatgtg 24096  T
Q  134 gtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaattctgaaaaaatggtggtca 209  Q
    || |||||  ||||||||||||||||||||||||| || ||| || |||||||||||||||||||| | |||||||    
T  24095 gttacgcat-taaaatgcgcgtgaccactatttttccacttattttaccaaataaattctgaaaaactagtggtca 24021  T

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Target: scaffold0126 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 21638 - 21549
Alignment:
Q  51 aaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgc 140  Q
    ||||| |||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21638 aaaatctcagttaaccgaatatatggtctgtgtgaccacattttttcagttgcgtgaccactatatagaagctgaaaaatgtggtcacgc 21549  T

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Target: scaffold0126; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 21432 - 21529
Alignment:
Q  19 tttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    |||||| |||||| || ||| ||||| | | |||||||||||||||| ||||||| ||||| ||| | || || || | ||||||||||||| |||||    
T  21432 tttaatgtgtacatccatttataccattttaaaaaatttcagttaaccaaatatacggtctgtgtaagcatatattttaagttgcgtgaccattattt 21529  T

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Target: scaffold0043 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 87035 - 87112
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||  | ||||||||||||||||||    
T  87035 atttagaaactgaaaaatgtggtcacgcaactaaaatacacgtgaccactatttttctacttagttaaccaaataaat 87112  T

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Target: scaffold0043; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 86895 - 86991
Alignment:
Q  20 ttaatatgtacacccttttgtaccactctcaaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactattt 116  Q
    ||||| ||||||||| ||| ||||| |||  |||| |||| ||||  |||||||| || | |||||||||||||| || |||| |||||||||||||    
T  86895 ttaatgtgtacacccctttctaccattctagaaaacttcaattaatcaaatatatagtttgtgtgaccacattttttcggttgtgtgaccactattt 86991  T

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Target: scaffold0024 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 112158 - 112235
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||||||||||||| || ||||||||| ||||||||    
T  112158 atttagaagctgaaaaacgtggtcacgcaattaaaatgcacgtgaccactatttttccacttagttaactaaataaat 112235  T

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Target: scaffold0291 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 5870 - 5947
Alignment:
Q  113 atttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactattttttcatttagttaaccaaataaat 190  Q
    ||||| |||||||||| ||||||  |||||||||||| |||||||||||||||||| || ||| ||||||||||||||    
T  5870 atttaaaagctgaaaagtgtggtgtcgcaactaaaatacgcgtgaccactatttttgcacttaattaaccaaataaat 5947  T

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Target: scaffold0213 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 24798 - 24738
Alignment:
Q  50 aaaaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgacca 110  Q
    ||||| |||||||| | ||||||||||||| |||||||||||||||| |||||||||||||    
T  24798 aaaaaattcagttagccaaatatatggtctatgtgaccacattttataagttgcgtgacca 24738  T

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Target: scaffold0213; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 24995 - 24932
Alignment:
Q  52 aaatttcagttaactaaatatatggtctttgtgaccacattttatcagttgcgtgaccactatt 115  Q
    |||||||||||| | |||||||| |||| ||||||||||| || ||||||| ||||||||||||    
T  24995 aaatttcagttagccaaatatatagtctgtgtgaccacatgttttcagttgtgtgaccactatt 24932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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