View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2171_high_15 (Length: 244)

Name: NF2171_high_15
Description: NF2171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2171_high_15
NF2171_high_15
[»] chr7 (51 HSPs)
chr7 (4-162)||(40070561-40070719)
chr7 (157-225)||(27396962-27397030)
chr7 (162-227)||(28469373-28469438)
chr7 (160-215)||(5457284-5457339)
chr7 (160-215)||(20426707-20426762)
chr7 (159-214)||(45010982-45011037)
chr7 (159-221)||(17102360-17102422)
chr7 (163-221)||(24389156-24389214)
chr7 (163-212)||(29141556-29141605)
chr7 (163-227)||(6571012-6571076)
chr7 (163-215)||(28469009-28469061)
chr7 (160-215)||(48788799-48788854)
chr7 (159-225)||(10935789-10935855)
chr7 (163-225)||(17102019-17102081)
chr7 (164-221)||(40380055-40380112)
chr7 (164-225)||(42731419-42731480)
chr7 (165-225)||(6253472-6253532)
chr7 (163-215)||(6253817-6253869)
chr7 (163-215)||(10936171-10936223)
chr7 (163-227)||(19204488-19204552)
chr7 (165-225)||(23181361-23181421)
chr7 (165-221)||(42019598-42019654)
chr7 (163-214)||(2640177-2640228)
chr7 (161-216)||(29144358-29144413)
chr7 (164-215)||(42362450-42362501)
chr7 (161-215)||(24388816-24388870)
chr7 (163-221)||(27396628-27396686)
chr7 (161-211)||(28105498-28105548)
chr7 (159-225)||(32299072-32299138)
chr7 (169-215)||(40379774-40379820)
chr7 (162-212)||(42731799-42731849)
chr7 (162-227)||(17886855-17886920)
chr7 (159-215)||(13386124-13386180)
chr7 (163-215)||(22871654-22871706)
chr7 (167-215)||(27992085-27992133)
chr7 (163-215)||(32298776-32298828)
chr7 (164-212)||(37657217-37657265)
chr7 (164-215)||(18670240-18670291)
chr7 (167-214)||(42019975-42020022)
chr7 (164-215)||(43123175-43123226)
chr7 (163-225)||(27991738-27991800)
chr7 (167-225)||(37656855-37656913)
chr7 (158-215)||(32053137-32053194)
chr7 (163-215)||(34793903-34793955)
chr7 (162-225)||(20425476-20425539)
chr7 (165-215)||(1960252-1960302)
chr7 (165-215)||(34799535-34799585)
chr7 (164-225)||(18087705-18087766)
chr7 (162-227)||(22828183-22828247)
chr7 (158-227)||(43266260-43266329)
chr7 (160-200)||(12930768-12930808)
[»] chr4 (65 HSPs)
chr4 (161-227)||(39539283-39539349)
chr4 (156-225)||(51692545-51692614)
chr4 (160-227)||(7451830-7451897)
chr4 (160-227)||(24711445-24711512)
chr4 (162-225)||(44967405-44967468)
chr4 (156-215)||(50419014-50419073)
chr4 (163-225)||(23613308-23613370)
chr4 (163-216)||(1178056-1178109)
chr4 (160-225)||(13058033-13058098)
chr4 (162-227)||(50418666-50418731)
chr4 (162-215)||(51692896-51692949)
chr4 (162-227)||(55867479-55867544)
chr4 (163-215)||(46661291-46661343)
chr4 (162-221)||(10781855-10781914)
chr4 (164-215)||(18831694-18831745)
chr4 (162-225)||(34765747-34765810)
chr4 (163-225)||(14801735-14801797)
chr4 (157-215)||(24349667-24349725)
chr4 (163-225)||(24711110-24711172)
chr4 (162-215)||(148132-148185)
chr4 (158-215)||(7452180-7452237)
chr4 (159-212)||(15508052-15508105)
chr4 (161-214)||(35027995-35028048)
chr4 (163-216)||(53702174-53702227)
chr4 (163-215)||(10780712-10780764)
chr4 (163-215)||(10974321-10974373)
chr4 (163-215)||(24350809-24350861)
chr4 (160-212)||(24411728-24411780)
chr4 (163-215)||(48528484-48528536)
chr4 (165-225)||(52909254-52909314)
chr4 (167-215)||(54086698-54086746)
chr4 (164-215)||(14802112-14802163)
chr4 (163-214)||(17355924-17355975)
chr4 (167-214)||(37976156-37976203)
chr4 (160-227)||(54087060-54087127)
chr4 (159-226)||(54435463-54435530)
chr4 (163-221)||(1179171-1179229)
chr4 (163-225)||(5368946-5369008)
chr4 (165-215)||(15507674-15507724)
chr4 (163-225)||(18831348-18831410)
chr4 (167-225)||(37248572-37248630)
chr4 (165-215)||(49879208-49879258)
chr4 (156-214)||(55866103-55866161)
chr4 (162-227)||(43155861-43155926)
chr4 (166-215)||(44967071-44967120)
chr4 (163-212)||(53129886-53129935)
chr4 (163-215)||(13058359-13058411)
chr4 (164-212)||(23613658-23613706)
chr4 (163-215)||(35028375-35028427)
chr4 (161-225)||(37976520-37976584)
chr4 (164-215)||(147319-147370)
chr4 (166-225)||(24411360-24411419)
chr4 (160-215)||(36008840-36008895)
chr4 (161-227)||(36009178-36009245)
chr4 (166-225)||(37248238-37248297)
chr4 (162-221)||(52909624-52909683)
chr4 (161-211)||(35508621-35508671)
chr4 (166-212)||(53701814-53701860)
chr4 (167-212)||(11108220-11108265)
chr4 (166-215)||(16006170-16006219)
chr4 (166-215)||(17356299-17356348)
chr4 (162-215)||(34765378-34765431)
chr4 (167-215)||(43155532-43155580)
chr4 (163-195)||(54713615-54713647)
chr4 (163-225)||(11448096-11448158)
[»] chr1 (74 HSPs)
chr1 (157-225)||(23209694-23209762)
chr1 (159-215)||(35152338-35152394)
chr1 (158-225)||(34464443-34464510)
chr1 (162-227)||(19515817-19515882)
chr1 (160-225)||(34464816-34464881)
chr1 (165-225)||(13914434-13914494)
chr1 (159-215)||(30711704-30711760)
chr1 (157-225)||(35473624-35473692)
chr1 (162-221)||(36694280-36694339)
chr1 (162-221)||(36710381-36710440)
chr1 (164-225)||(6367562-6367623)
chr1 (163-215)||(17661851-17661903)
chr1 (161-221)||(19018000-19018060)
chr1 (159-215)||(24009570-24009626)
chr1 (163-227)||(25647883-25647947)
chr1 (159-215)||(37578187-37578243)
chr1 (167-227)||(40435348-40435408)
chr1 (162-225)||(5734008-5734070)
chr1 (162-225)||(41098731-41098794)
chr1 (160-215)||(43759199-43759254)
chr1 (159-221)||(13914063-13914125)
chr1 (163-221)||(48779490-48779548)
chr1 (164-225)||(26024759-26024820)
chr1 (164-225)||(40772507-40772568)
chr1 (166-215)||(42248475-42248524)
chr1 (162-227)||(42533022-42533087)
chr1 (164-221)||(46899061-46899118)
chr1 (163-215)||(1103838-1103890)
chr1 (163-215)||(6367939-6367991)
chr1 (163-214)||(17662228-17662279)
chr1 (164-215)||(34850442-34850493)
chr1 (162-225)||(36694615-36694678)
chr1 (162-225)||(36710716-36710779)
chr1 (163-214)||(37578570-37578621)
chr1 (162-225)||(47999459-47999522)
chr1 (167-225)||(24009908-24009966)
chr1 (163-225)||(26024422-26024484)
chr1 (165-211)||(35152711-35152757)
chr1 (167-225)||(46163033-46163091)
chr1 (163-221)||(46899971-46900029)
chr1 (171-221)||(49723097-49723147)
chr1 (163-216)||(7821329-7821382)
chr1 (163-212)||(19017628-19017677)
chr1 (167-215)||(17692562-17692610)
chr1 (164-212)||(30711327-30711375)
chr1 (167-215)||(40210373-40210421)
chr1 (163-215)||(40772836-40772888)
chr1 (164-215)||(183221-183272)
chr1 (165-212)||(4960541-4960588)
chr1 (164-211)||(6518177-6518224)
chr1 (164-215)||(32917637-32917688)
chr1 (164-215)||(34849011-34849062)
chr1 (166-225)||(40210737-40210796)
chr1 (168-215)||(41099110-41099157)
chr1 (164-215)||(47999123-47999174)
chr1 (160-227)||(48692379-48692446)
chr1 (160-225)||(183558-183624)
chr1 (168-210)||(1103463-1103505)
chr1 (163-225)||(7820953-7821015)
chr1 (165-215)||(13300281-13300331)
chr1 (173-225)||(14878980-14879032)
chr1 (167-211)||(23209365-23209408)
chr1 (164-212)||(26234430-26234478)
chr1 (159-211)||(31197060-31197112)
chr1 (163-214)||(5735089-5735140)
chr1 (164-215)||(14879335-14879386)
chr1 (160-215)||(51015629-51015684)
chr1 (162-212)||(1841838-1841888)
chr1 (169-215)||(4960886-4960932)
chr1 (163-221)||(7231620-7231678)
chr1 (163-225)||(17691218-17691280)
chr1 (162-211)||(19322890-19322939)
chr1 (166-194)||(40439587-40439615)
chr1 (163-215)||(51019726-51019778)
[»] chr5 (76 HSPs)
chr5 (162-225)||(20814502-20814565)
chr5 (157-227)||(6150785-6150855)
chr5 (157-227)||(19892301-19892371)
chr5 (166-227)||(19892673-19892734)
chr5 (162-227)||(38475364-38475429)
chr5 (161-225)||(5993886-5993950)
chr5 (165-225)||(18247087-18247147)
chr5 (159-215)||(20814131-20814187)
chr5 (164-215)||(186796-186847)
chr5 (160-215)||(14194419-14194474)
chr5 (167-225)||(5024385-5024443)
chr5 (155-225)||(27587139-27587209)
chr5 (163-224)||(6150453-6150514)
chr5 (162-227)||(20840531-20840596)
chr5 (163-215)||(16157232-16157284)
chr5 (164-227)||(3529207-3529270)
chr5 (162-225)||(20840804-20840867)
chr5 (166-225)||(39453302-39453361)
chr5 (163-225)||(11761748-11761810)
chr5 (165-227)||(16156856-16156918)
chr5 (163-225)||(17202398-17202460)
chr5 (163-225)||(18670201-18670263)
chr5 (159-225)||(35512143-35512209)
chr5 (162-215)||(28269420-28269473)
chr5 (162-215)||(28770867-28770920)
chr5 (164-225)||(28771205-28771266)
chr5 (166-215)||(35512491-35512540)
chr5 (163-215)||(3528872-3528924)
chr5 (164-212)||(5024019-5024067)
chr5 (163-215)||(11762094-11762146)
chr5 (159-215)||(17202776-17202832)
chr5 (163-215)||(18247453-18247505)
chr5 (163-215)||(24547502-24547554)
chr5 (160-212)||(32242238-32242290)
chr5 (163-215)||(39453676-39453728)
chr5 (163-215)||(42265734-42265786)
chr5 (167-215)||(43159191-43159239)
chr5 (160-215)||(13962860-13962915)
chr5 (164-215)||(27587492-27587543)
chr5 (169-215)||(8322781-8322827)
chr5 (167-225)||(13362595-13362653)
chr5 (167-216)||(11047812-11047861)
chr5 (167-212)||(11740690-11740735)
chr5 (162-227)||(13963194-13963259)
chr5 (164-225)||(35920551-35920612)
chr5 (165-210)||(38442449-38442494)
chr5 (165-221)||(19517978-19518034)
chr5 (161-225)||(24547174-24547238)
chr5 (163-211)||(32242622-32242670)
chr5 (163-214)||(16083321-16083372)
chr5 (163-214)||(21265520-21265571)
chr5 (162-221)||(29646360-29646419)
chr5 (167-213)||(21257540-21257586)
chr5 (161-215)||(37991196-37991250)
chr5 (170-223)||(5256381-5256433)
chr5 (157-214)||(5835804-5835861)
chr5 (163-215)||(6301920-6301970)
chr5 (167-212)||(10684317-10684362)
chr5 (162-195)||(27937053-27937086)
chr5 (167-212)||(27937379-27937424)
chr5 (157-206)||(31006707-31006756)
chr5 (164-221)||(38475033-38475090)
chr5 (163-227)||(186419-186482)
chr5 (162-210)||(28269762-28269809)
chr5 (166-210)||(37992670-37992714)
chr5 (163-227)||(40148897-40148961)
chr5 (162-213)||(14194801-14194852)
chr5 (166-225)||(16082979-16083038)
chr5 (163-194)||(42265890-42265921)
chr5 (165-215)||(11741894-11741944)
chr5 (171-225)||(38442075-38442129)
chr5 (162-195)||(13362248-13362281)
chr5 (163-195)||(11047437-11047469)
chr5 (163-227)||(24141451-24141515)
chr5 (165-221)||(35920229-35920285)
chr5 (163-227)||(40150179-40150243)
[»] chr6 (32 HSPs)
chr6 (163-225)||(21628080-21628142)
chr6 (161-215)||(33647328-33647382)
chr6 (162-215)||(30726136-30726189)
chr6 (163-215)||(3059633-3059685)
chr6 (159-215)||(8090304-8090360)
chr6 (163-215)||(33517911-33517963)
chr6 (164-215)||(15115339-15115390)
chr6 (162-225)||(30337447-30337510)
chr6 (162-215)||(681105-681158)
chr6 (159-211)||(12081017-12081069)
chr6 (159-215)||(26463174-26463230)
chr6 (156-212)||(30804241-30804297)
chr6 (166-221)||(11434804-11434859)
chr6 (163-214)||(17734195-17734246)
chr6 (162-215)||(13379859-13379912)
chr6 (164-225)||(30337785-30337846)
chr6 (164-225)||(30725760-30725820)
chr6 (162-227)||(30803859-30803924)
chr6 (163-215)||(679865-679917)
chr6 (166-225)||(12080638-12080697)
chr6 (164-215)||(15116609-15116660)
chr6 (167-213)||(22617886-22617932)
chr6 (167-225)||(33517537-33517595)
chr6 (162-215)||(12408548-12408601)
chr6 (157-225)||(3059250-3059318)
chr6 (163-215)||(8089442-8089494)
chr6 (163-215)||(11393181-11393233)
chr6 (165-225)||(17734530-17734590)
chr6 (162-214)||(20651008-20651060)
chr6 (164-215)||(12407508-12407559)
chr6 (164-215)||(26464576-26464627)
chr6 (163-221)||(21627712-21627770)
[»] chr3 (43 HSPs)
chr3 (164-225)||(40758147-40758208)
chr3 (163-218)||(26463960-26464015)
chr3 (158-216)||(33689376-33689434)
chr3 (160-225)||(23458346-23458411)
chr3 (160-225)||(33689746-33689811)
chr3 (160-221)||(40758481-40758542)
chr3 (162-223)||(42342789-42342850)
chr3 (162-214)||(40033834-40033886)
chr3 (164-215)||(9294335-9294386)
chr3 (164-227)||(34142583-34142646)
chr3 (163-225)||(19741259-19741321)
chr3 (162-215)||(51993962-51994015)
chr3 (167-215)||(36150530-36150578)
chr3 (165-221)||(53757094-53757150)
chr3 (162-225)||(2796177-2796240)
chr3 (164-215)||(3850504-3850555)
chr3 (159-214)||(41558003-41558058)
chr3 (164-214)||(36418066-36418116)
chr3 (167-225)||(46474818-46474876)
chr3 (156-221)||(2796468-2796533)
chr3 (166-215)||(9292245-9292294)
chr3 (165-221)||(35712045-35712101)
chr3 (165-225)||(51994253-51994313)
chr3 (167-227)||(53756747-53756807)
chr3 (163-215)||(53856434-53856486)
chr3 (164-215)||(53856015-53856066)
chr3 (170-224)||(9368669-9368723)
chr3 (162-227)||(1079586-1079651)
chr3 (167-212)||(26463635-26463680)
chr3 (167-212)||(46475160-46475205)
chr3 (162-225)||(19740921-19740984)
chr3 (168-211)||(41558263-41558306)
chr3 (164-227)||(55052613-55052675)
chr3 (173-215)||(23457988-23458030)
chr3 (165-195)||(41989583-41989613)
chr3 (167-221)||(42343102-42343156)
chr3 (162-227)||(1078535-1078600)
chr3 (162-215)||(9367739-9367792)
chr3 (166-195)||(43384680-43384709)
chr3 (163-215)||(3849030-3849082)
chr3 (165-225)||(23276350-23276410)
chr3 (163-215)||(25107212-25107264)
chr3 (167-215)||(36417691-36417739)
[»] chr8 (56 HSPs)
chr8 (161-225)||(34060486-34060550)
chr8 (159-214)||(16388578-16388633)
chr8 (158-221)||(33357492-33357555)
chr8 (164-225)||(39071676-39071737)
chr8 (163-227)||(8316652-8316716)
chr8 (159-227)||(12273218-12273286)
chr8 (162-225)||(23663881-23663944)
chr8 (164-215)||(42803595-42803646)
chr8 (163-225)||(8316955-8317017)
chr8 (163-225)||(13186059-13186121)
chr8 (160-214)||(13186437-13186491)
chr8 (163-225)||(40318331-40318393)
chr8 (162-215)||(12198948-12199001)
chr8 (162-215)||(12443376-12443429)
chr8 (162-215)||(23663543-23663596)
chr8 (160-225)||(23698611-23698676)
chr8 (163-215)||(4995033-4995085)
chr8 (163-215)||(20386807-20386859)
chr8 (167-215)||(38862940-38862988)
chr8 (159-215)||(39072018-39072074)
chr8 (164-223)||(16388895-16388954)
chr8 (164-215)||(20385568-20385619)
chr8 (164-215)||(38956049-38956100)
chr8 (161-215)||(1425050-1425104)
chr8 (163-225)||(22915725-22915787)
chr8 (159-221)||(31608884-31608946)
chr8 (163-221)||(34061699-34061757)
chr8 (163-221)||(36928847-36928905)
chr8 (164-221)||(4406031-4406088)
chr8 (164-225)||(38955703-38955764)
chr8 (166-211)||(40317966-40318011)
chr8 (159-215)||(34685634-34685690)
chr8 (160-208)||(36186448-36186496)
chr8 (165-212)||(7294103-7294149)
chr8 (166-225)||(12272920-12272979)
chr8 (165-215)||(1425398-1425448)
chr8 (161-215)||(7313382-7313436)
chr8 (164-225)||(5960046-5960107)
chr8 (166-215)||(9065667-9065716)
chr8 (164-221)||(30459371-30459428)
chr8 (166-215)||(34177347-34177396)
chr8 (160-212)||(4994653-4994705)
chr8 (163-215)||(7306398-7306450)
chr8 (163-227)||(10749873-10749937)
chr8 (162-214)||(34176443-34176494)
chr8 (164-227)||(2535915-2535978)
chr8 (160-215)||(35756580-35756634)
chr8 (164-225)||(23698308-23698370)
chr8 (165-215)||(30712093-30712143)
chr8 (165-215)||(30719870-30719920)
chr8 (164-194)||(38862618-38862648)
chr8 (164-225)||(2534695-2534756)
chr8 (158-215)||(7295304-7295361)
chr8 (163-212)||(9065750-9065799)
chr8 (163-212)||(31608526-31608575)
chr8 (165-201)||(4405700-4405736)
[»] chr2 (45 HSPs)
chr2 (157-215)||(6658224-6658282)
chr2 (163-215)||(3555249-3555301)
chr2 (163-215)||(36755465-36755517)
chr2 (162-225)||(11163390-11163453)
chr2 (164-215)||(30729621-30729672)
chr2 (167-221)||(6588686-6588740)
chr2 (163-225)||(15848087-15848149)
chr2 (162-212)||(39423895-39423945)
chr2 (159-221)||(39498650-39498712)
chr2 (161-214)||(15848466-15848519)
chr2 (165-225)||(2318160-2318219)
chr2 (163-215)||(16099401-16099453)
chr2 (163-215)||(36382504-36382556)
chr2 (166-225)||(36479719-36479779)
chr2 (163-215)||(37895346-37895398)
chr2 (159-215)||(44045379-44045435)
chr2 (163-214)||(2318888-2318939)
chr2 (164-227)||(21370567-21370630)
chr2 (162-221)||(25231219-25231278)
chr2 (162-224)||(6657876-6657938)
chr2 (164-214)||(10713101-10713151)
chr2 (161-215)||(36382158-36382212)
chr2 (163-225)||(45556111-45556173)
chr2 (164-225)||(22051360-22051421)
chr2 (162-215)||(34448172-34448225)
chr2 (166-215)||(36480095-36480144)
chr2 (168-221)||(44713799-44713852)
chr2 (163-215)||(34447812-34447864)
chr2 (159-211)||(44714142-44714193)
chr2 (163-215)||(45556424-45556476)
chr2 (164-227)||(3556374-3556437)
chr2 (164-215)||(6307095-6307145)
chr2 (164-215)||(9076444-9076495)
chr2 (160-215)||(10712719-10712774)
chr2 (164-215)||(11163054-11163105)
chr2 (164-215)||(25230102-25230153)
chr2 (165-214)||(36755094-36755143)
chr2 (164-225)||(39423515-39423576)
chr2 (163-224)||(43742044-43742105)
chr2 (175-215)||(13692597-13692637)
chr2 (164-224)||(16099055-16099115)
chr2 (159-227)||(28228665-28228733)
chr2 (171-227)||(39498317-39498373)
chr2 (163-215)||(44044113-44044165)
chr2 (167-214)||(37895725-37895772)
[»] scaffold0707 (1 HSPs)
scaffold0707 (163-215)||(6456-6508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (164-215)||(69342-69393)
scaffold0031 (164-224)||(68965-69025)
[»] scaffold0005 (2 HSPs)
scaffold0005 (163-225)||(37930-37992)
scaffold0005 (164-215)||(37564-37615)
[»] scaffold0020 (2 HSPs)
scaffold0020 (160-225)||(139668-139733)
scaffold0020 (167-215)||(140018-140066)
[»] scaffold0007 (2 HSPs)
scaffold0007 (163-215)||(2118-2170)
scaffold0007 (162-225)||(1767-1830)
[»] scaffold0075 (2 HSPs)
scaffold0075 (164-215)||(14767-14818)
scaffold0075 (159-211)||(14424-14476)
[»] scaffold0775 (1 HSPs)
scaffold0775 (162-212)||(4960-5010)
[»] scaffold0295 (1 HSPs)
scaffold0295 (163-215)||(2506-2558)
[»] scaffold0128 (1 HSPs)
scaffold0128 (167-215)||(19860-19908)
[»] scaffold0328 (1 HSPs)
scaffold0328 (156-227)||(11503-11574)
[»] scaffold0009 (1 HSPs)
scaffold0009 (160-200)||(260997-261037)


Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 40070719 - 40070561
Alignment:
Q  4 atgtcgaagaatatttttatttatcatagaaataatataattagtagagaaaataaaatatatctttagtttttacgtcactaaatttagtgattgtatt 103  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  40070719 atgtcaaaaaatatttttatttatcatagaaataatataatcagtagagaaaataaaatatatctttagttttcacgtcactaaatttagcgattgtatt 40070620  T
Q  104 atagataaatatatcttttactaacttattttttccagacagtgaatcatcaatatttt 162  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40070619 atagataaatatatcttttactaacttattttttcctgacagtgaatcatcaatatttt 40070561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 27397030 - 27396962
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  27397030 tattttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 27396962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 28469438 - 28469373
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 28469373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 5457339 - 5457284
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5457339 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 5457284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 20426762 - 20426707
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  20426762 tttaggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtc 20426707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 45011037 - 45010982
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  45011037 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 45010982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 17102422 - 17102360
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||||    
T  17102422 ttttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgta 17102360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 24389214 - 24389156
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgta 24389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 29141605 - 29141556
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 6571012 - 6571076
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 6571076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 28469009 - 28469061
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 28469061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 48788799 - 48788854
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  48788799 tttaggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtc 48788854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 10935789 - 10935855
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  10935789 tttttggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 10935855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 17102019 - 17102081
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 17102081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 40380112 - 40380055
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||| |||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgta 40380055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 42731419 - 42731480
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||||||  ||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcg 42731480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 6253472 - 6253532
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 6253532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 6253869 - 6253817
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 6253817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 10936223 - 10936171
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtc 10936171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 19204488 - 19204552
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||| ||||||| |||||| ||||| |||||||||||||  ||||||||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgtt 19204552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23181421 - 23181361
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||| |||||||||| ||||| ||||| ||||||| |||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcg 23181361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 42019598 - 42019654
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgta 42019654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 2640177 - 2640228
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 2640228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 29144413 - 29144358
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtca 216  Q
    ||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  29144413 ttaggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtca 29144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 42362450 - 42362501
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtc 42362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 24388816 - 24388870
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||| |||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  24388816 ttagacttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtc 24388870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 27396628 - 27396686
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||| |||||| || || ||||||||||||| |||||    
T  27396628 aggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgta 27396686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 28105498 - 28105548
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  28105498 ttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatt 28105548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 32299138 - 32299072
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||| |||||||||||||||| ||||||||||||||  |||| |||||||||||||  ||||||||    
T  32299138 ttttatgcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcg 32299072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 40379774 - 40379820
Alignment:
Q  169 aaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 40379820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 42731849 - 42731799
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattg 42731799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 17886920 - 17886855
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||||||||||||||||||| | ||  |||||||||| || ||||| |||||    
T  17886920 taggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgtt 17886855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 13386180 - 13386124
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||| ||||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  13386180 tttttggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtc 13386124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 22871706 - 22871654
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||  |||||||||||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtc 22871654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 27992133 - 27992085
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 27992085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 32298776 - 32298828
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||| |||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtc 32298828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 37657265 - 37657217
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattg 37657217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 18670291 - 18670240
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtc 18670240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 42020022 - 42019975
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggt 42019975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 43123175 - 43123226
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| ||| ||||||||| ||||| |||||||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtc 43123226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 27991738 - 27991800
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| ||| |||||| ||  ||||||||    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcg 27991800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 37656855 - 37656913
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||   ||| |||||||||||||  ||||||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcg 37656913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 32053137 - 32053194
Alignment:
Q  158 attttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||| |||||||||||||||||||||||||| |||||  ||||| |||||||| ||||    
T  32053137 atttaaggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaatcggtc 32053194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 34793903 - 34793955
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||    
T  34793903 aggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattggtc 34793955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 20425476 - 20425539
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||| ||||||| ||||||||| | ||  ||||||||||||  |||||||||    
T  20425476 taggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggttcatgtaatcg 20425539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 1960302 - 1960252
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||| |||| ||||| ||| |||||||||||| ||||||    
T  1960302 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaatttggtc 1960252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 34799585 - 34799535
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||| |||| ||||| ||| ||||| |||||||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtc 34799535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 18087766 - 18087705
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||| ||||||| |||  ||||||||||||| ||||  |||||||||||||| ||||||||    
T  18087766 ggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcg 18087705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 22828247 - 22828183
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||| |||| ||||||||||| |||||| ||||  |||||||||||||  ||||||||||    
T  22828247 taggcttaaa-atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgtt 22828183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 43266260 - 43266329
Alignment:
Q  158 attttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||  |||| |||| |||||||||||||  |||  ||||||||| ||| |||||||||||    
T  43266260 attttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgtt 43266329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 12930768 - 12930808
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtc 200  Q
    |||||||||||||||| ||||||||| |||||||| |||||    
T  12930768 tttaggcttaaatatgcatttcatccctgcaattataggtc 12930808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 39539349 - 39539283
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  39539349 ttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgtt 39539283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 51692545 - 51692614
Alignment:
Q  156 atattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  51692545 atattataggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcg 51692614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 7451830 - 7451897
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  7451830 tttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 7451897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 24711512 - 24711445
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||| ||||||    
T  24711512 tttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgtt 24711445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 44967468 - 44967405
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||||    
T  44967468 taggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcg 44967405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 50419073 - 50419014
Alignment:
Q  156 atattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  50419073 atattttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 50419014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 23613308 - 23613370
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||||||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcg 23613370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 1178056 - 1178109
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtca 216  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggtca 1178109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 13058033 - 13058098
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  13058033 tttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcg 13058098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 50418666 - 50418731
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 50418731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 51692949 - 51692896
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 51692896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 55867544 - 55867479
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||    
T  55867544 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgtt 55867479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 46661343 - 46661291
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 46661291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 10781914 - 10781855
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||||    
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgta 10781855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 18831745 - 18831694
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 18831694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 34765810 - 34765747
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||  |||||||||    
T  34765810 taggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcg 34765747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 14801735 - 14801797
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||  ||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcg 14801797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 24349667 - 24349725
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  24349667 tattctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 24349725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 24711110 - 24711172
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 24711172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 148185 - 148132
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtc 148132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 7452237 - 7452180
Alignment:
Q  158 attttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  7452237 atttttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 7452180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 15508105 - 15508052
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  15508105 ttttagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 15508052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 35027995 - 35028048
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  35027995 ttaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 35028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 53702227 - 53702174
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtca 216  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  53702227 aggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggtca 53702174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 10780712 - 10780764
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 10780764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 10974321 - 10974373
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 10974373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 24350861 - 24350809
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 24350809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 24411780 - 24411728
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  24411780 tttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattg 24411728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 48528484 - 48528536
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 48528536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 52909254 - 52909314
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||| |||||||||| ||||| | |||||||||||| ||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcg 52909314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 54086698 - 54086746
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 54086746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 14802163 - 14802112
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  14802163 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtc 14802112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 17355924 - 17355975
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  17355924 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 17355975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 37976156 - 37976203
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggt 37976203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 54087127 - 54087060
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||| ||||||||||||||||||| ||| |||||| ||||| |||||||||||||  ||||||||||    
T  54087127 tttagacttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgtt 54087060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 54435530 - 54435463
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgt 226  Q
    ||||||||||||||||||||||| | |||||||||||  |||| |||||||||| || ||||||||||    
T  54435530 ttttaggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgtaatcgt 54435463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 1179229 - 1179171
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||| ||| |||||||||| ||||| ||||||||||||| |||||    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgta 1179171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 5368946 - 5369008
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| | ||| |||||||||||||  ||||||||    
T  5368946 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcg 5369008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 15507674 - 15507724
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtc 15507724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 18831348 - 18831410
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||| ||||||| ||||| |||||||||||||  ||||||||    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcg 18831410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 37248630 - 37248572
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 37248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 49879208 - 49879258
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 49879258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 55866103 - 55866161
Alignment:
Q  156 atattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||| |||||||||||||||||| ||| ||||||||| ||||| ||||||||||||    
T  55866103 atatttttggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt 55866161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 43155926 - 43155861
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||| ||||||  |||||| ||||| |||||||||||||  ||||||||||    
T  43155926 taggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgtt 43155861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 44967071 - 44967120
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 44967120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 53129935 - 53129886
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattg 53129886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 13058411 - 13058359
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| ||||||||||| || ||||| |||||||||||||    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtc 13058359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 23613706 - 23613658
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattg 23613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 35028427 - 35028375
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| |||   |||||||||||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtc 35028375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 37976584 - 37976520
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||| | |||||||| ||||| |||||||||| ||  ||||||||    
T  37976584 ttaggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcg 37976520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 147319 - 147370
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||| | ||||||| ||||| |||||||||||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtc 147370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 24411360 - 24411419
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||||||  ||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcg 24411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 36008840 - 36008895
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||| ||||||| |||||| | ||| |||||||||||||    
T  36008840 tttaggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtc 36008895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 36009245 - 36009178
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaatta-gaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||||| ||||||| ||||| | ||||| |||||||||||||  ||||||||||    
T  36009245 ttaggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgtt 36009178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 37248238 - 37248297
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||| | |||||||||||| ||||| |||||||||||||  ||||||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 37248297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 52909683 - 52909624
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||||||||||  | ||  ||||||||||||| |||||    
T  52909683 taggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgta 52909624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 35508671 - 35508621
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    |||||||||||||||||||| ||| |||||||||| ||||| |||||||||    
T  35508671 ttaggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaatt 35508621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 53701814 - 53701860
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattg 53701860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 11108265 - 11108220
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||||||| | ||| ||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattg 11108220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 16006219 - 16006170
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtc 16006170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 17356348 - 17356299
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||| ||||||  ||||| |||||||||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtc 17356299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 34765378 - 34765431
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| |||||||||||||  ||||| |||||||| ||||    
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtc 34765431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 43155532 - 43155580
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||| |||||||||||||  ||||| |||||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtc 43155580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 54713615 - 54713647
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattag 195  Q
    |||||||||||||||||||||||||||||||||    
T  54713615 aggcttaaatatgtatttcatccttgcaattag 54713647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 11448158 - 11448096
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| ||| || |||||| ||||| |||||||||| ||  ||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcg 11448096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 23209762 - 23209694
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  23209762 tattttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcg 23209694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 35152338 - 35152394
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35152338 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 35152394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 34464443 - 34464510
Alignment:
Q  158 attttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  34464443 atttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcg 34464510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 19515817 - 19515882
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgtt 19515882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 34464881 - 34464816
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| |||||||||    
T  34464881 tttaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcg 34464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 13914494 - 13914434
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcg 13914434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 30711760 - 30711704
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  30711760 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 30711704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 35473624 - 35473692
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  35473624 tattttaggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 35473692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 36694280 - 36694339
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgta 36694339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 36710381 - 36710440
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgta 36710440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 6367562 - 6367623
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 6367623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 17661851 - 17661903
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 17661903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 19018060 - 19018000
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||    
T  19018060 ttaggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgta 19018000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 24009570 - 24009626
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  24009570 tttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 24009626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 25647883 - 25647947
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 25647947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 37578187 - 37578243
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  37578187 ttttaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 37578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 40435348 - 40435408
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtattcgtt 40435408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 5734008 - 5734070
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtc-atgtaatcg 5734070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 41098731 - 41098794
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||  ||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcg 41098794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 43759254 - 43759199
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  43759254 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtc 43759199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 13914063 - 13914125
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||| |||||    
T  13914063 ttttaggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgta 13914125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 48779548 - 48779490
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||    
T  48779548 aggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgta 48779490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 26024820 - 26024759
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 26024759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 40772507 - 40772568
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||||||||  ||||||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcg 40772568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 42248475 - 42248524
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtc 42248524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 42533022 - 42533087
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| ||||| |||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgtt 42533087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 46899061 - 46899118
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgta 46899118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 1103890 - 1103838
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtc 1103838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 6367991 - 6367939
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtc 6367939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 17662279 - 17662228
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggt 17662228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 34850493 - 34850442
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtc 34850442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 36694678 - 36694615
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||||  || | |||||||||||||  ||||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcg 36694615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 36710779 - 36710716
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||||  || | |||||||||||||  ||||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcg 36710716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 37578621 - 37578570
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggt 37578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 47999522 - 47999459
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||  ||||||||    
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcg 47999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 24009966 - 24009908
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||| |||||||||||||||||||||| | ||| |||||||||||||| ||||||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcg 24009908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 26024422 - 26024484
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| || ||||||||||| ||||| |||||||||||||  ||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcg 26024484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 35152757 - 35152711
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 35152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 46163033 - 46163091
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||||||||| |||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcg 46163091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 46900029 - 46899971
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||| ||||||||  ||||  |||||||||||||||||||    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgta 46899971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 49723147 - 49723097
Alignment:
Q  171 atatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgta 49723097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 7821382 - 7821329
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtca 216  Q
    ||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||    
T  7821382 aggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggtca 7821329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 19017628 - 19017677
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 19017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 17692610 - 17692562
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtc 17692562  T

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Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 30711327 - 30711375
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 30711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 40210373 - 40210421
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  40210373 ttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtc 40210421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 40772888 - 40772836
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtc 40772836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 183221 - 183272
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||| ||||||| ||||| |||||||||||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtc 183272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 4960541 - 4960588
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattg 4960588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 32917688 - 32917637
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtc 32917637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 34849011 - 34849062
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtc 34849062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 40210796 - 40210737
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||| || || |||||||||||||  ||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcg 40210737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 41099157 - 41099110
Alignment:
Q  168 taaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtc 41099110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 47999123 - 47999174
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||||||||||| | ||| |||||||||||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtc 47999174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 48692446 - 48692379
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||| |||||||||||||||| ||| ||| |||||||||||| |||||||||| ||| |||| |||||    
T  48692446 tttaagcttaaatatgtatttgatcattgtaattagaggtcgtttaaaaattgatcattgtattcgtt 48692379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 183624 - 183558
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaatta-gaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||| ||||||| ||||| | ||||| |||||||||||||  ||||||||    
T  183624 tttaggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcg 183558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 1103463 - 1103505
Alignment:
Q  168 taaatatgtatttcatccttgcaattagaggtcgcttaaaaat 210  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaat 1103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 7820953 - 7821015
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||| ||||  |||| |||| |||  ||||||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcg 7821015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 13300331 - 13300281
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||| ||||||||||  |||| |||||||||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtc 13300281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 14878980 - 14879032
Alignment:
Q  173 atgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||| |||||||||||||| ||||| ||||||||||||  |||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcg 14879032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 23209365 - 23209408
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  23209365 ttaaatatgtatttcatccttgcaattag-ggtcgtttaaaaatt 23209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 26234478 - 26234430
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||||    
T  26234478 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattg 26234430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 31197060 - 31197112
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    |||| |||||||||||||||||||||| ||||||||| ||||  |||||||||    
T  31197060 tttttggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatt 31197112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 5735140 - 5735089
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||| |||||||||   ||| ||||||||||||    
T  5735140 aggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggt 5735089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 14879386 - 14879335
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||| ||||||||| |||||||||| | ||| |||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggtc 14879335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 51015629 - 51015684
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| || |||| ||||| ||| ||||| |||||||||||||    
T  51015629 tttaggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtc 51015684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 1841888 - 1841838
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||| |||||||||||||||||||||| ||| || ||||| ||||||||||    
T  1841888 taggtttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattg 1841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 4960932 - 4960886
Alignment:
Q  169 aaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||| |||||| || |||||||||||||| |||||||||||||    
T  4960932 aaatatgtttttcatactagcaattagaggtcgtttaaaaattggtc 4960886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 7231678 - 7231620
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||| ||||||| ||||||  |||| |||||||||| ||| ||||    
T  7231678 aggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattgatcactgta 7231620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 17691218 - 17691280
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||| |||||||||||| ||||| ||| ||| ||||| |||||||||||||  ||||||||    
T  17691218 aggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcg 17691280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 19322890 - 19322939
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    ||||||||||||||||||||||||||  |||||  ||||| |||||||||    
T  19322890 taggcttaaatatgtatttcatccttataattacgggtcgtttaaaaatt 19322939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 40439615 - 40439587
Alignment:
Q  166 cttaaatatgtatttcatccttgcaatta 194  Q
    |||||||||||||||||||||||||||||    
T  40439615 cttaaatatgtatttcatccttgcaatta 40439587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 51019778 - 51019726
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||| || |||| ||||| ||| ||||| |||||||||||||    
T  51019778 aggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtc 51019726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 20814565 - 20814502
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcg 20814502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 6150855 - 6150785
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| ||||| |||||    
T  6150855 tattttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgtt 6150785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 19892301 - 19892371
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||    
T  19892301 tattttagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgtt 19892371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 19892734 - 19892673
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgtt 19892673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 38475429 - 38475364
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  38475429 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgtt 38475364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 5993886 - 5993950
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  5993886 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 5993950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 18247087 - 18247147
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcg 18247147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 20814131 - 20814187
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  20814131 ttttaggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggtc 20814187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 186847 - 186796
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 186796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 14194419 - 14194474
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  14194419 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 14194474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 5024443 - 5024385
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcg 5024385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 27587139 - 27587209
Alignment:
Q  155 aatattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  27587139 aatatttttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 27587209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 6150453 - 6150514
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatc 224  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatc 6150514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 20840531 - 20840596
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||   ||||||||||    
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgtt 20840596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 16157284 - 16157232
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 16157232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 3529270 - 3529207
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 3529207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 20840867 - 20840804
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||| | ||||||||    
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcg 20840804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 39453302 - 39453361
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcg 39453361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 11761748 - 11761810
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 11761810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 16156856 - 16156918
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||| |||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgtt 16156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 17202398 - 17202460
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||| |||||||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcg 17202460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 18670201 - 18670263
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||  ||||||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcg 18670263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 35512143 - 35512209
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||  ||||||||    
T  35512143 ttttaggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcg 35512209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 28269420 - 28269473
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  28269420 taggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtc 28269473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 28770867 - 28770920
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 28770920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 28771266 - 28771205
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||| ||||||| |||||| ||||| ||||||||||||| |||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcg 28771205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 35512540 - 35512491
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 35512491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 3528872 - 3528924
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 3528924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 5024019 - 5024067
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 5024067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 11762146 - 11762094
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 11762094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 17202832 - 17202776
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  17202832 tttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtc 17202776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 18247505 - 18247453
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtc 18247453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 24547554 - 24547502
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 24547502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 32242238 - 32242290
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  32242238 tttagggttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 32242290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 39453728 - 39453676
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc 39453676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 42265734 - 42265786
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtc 42265786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 43159239 - 43159191
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 43159191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 13962860 - 13962915
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||    
T  13962860 tttaggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtc 13962915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 27587543 - 27587492
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 27587492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 8322827 - 8322781
Alignment:
Q  169 aaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 8322781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 13362653 - 13362595
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||||  ||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcg 13362595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 11047861 - 11047812
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtca 216  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtca 11047812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 11740690 - 11740735
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 11740735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 13963259 - 13963194
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||| ||||||||||||| |||||  ||||| ||||||||||||| ||||| |||||    
T  13963259 taggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgtt 13963194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 35920612 - 35920551
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||| | |||||||| ||||| |||||||||||||  ||||||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcg 35920551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 38442494 - 38442449
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaat 210  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 38442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 19518034 - 19517978
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||| ||| |||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgta 19517978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 24547174 - 24547238
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||| || |||||||||||||| ||||| | |||||||||||  ||||||||    
T  24547174 ttaggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcg 24547238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 32242670 - 32242622
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaatt 32242622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 16083372 - 16083321
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||||||  | ||| ||||||||||||    
T  16083372 aggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggt 16083321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 21265571 - 21265520
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||| ||||||  ||||| ||||||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggt 21265520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 29646360 - 29646419
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||| ||||||| |||||| ||||  ||||||||||||| |||||    
T  29646360 taggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgta 29646419  T

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Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 21257586 - 21257540
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattgg 213  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattgg 21257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 37991196 - 37991250
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||| | ||||||| ||||||||| ||||| |||||||||||||    
T  37991196 ttaggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtc 37991250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 5256433 - 5256381
Alignment:
Q  170 aatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaat 223  Q
    ||||||||| || ||||||||||||| ||||| |||||||||||||||||||||    
T  5256433 aatatgtatctcgtccttgcaattag-ggtcgtttaaaaattggtcaatgtaat 5256381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 5835861 - 5835804
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    |||||| || |||||||||||||||||||||||||||||  || | ||||||||||||    
T  5835861 tatttttggtttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggt 5835804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 6301970 - 6301920
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||  |||||||||| ||||| |||||||||||||    
T  6301970 aggcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggtc 6301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 10684362 - 10684317
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||    
T  10684362 ttaaatatgtatttcatctttgcaattaaaggtcgtttaaaaattg 10684317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 27937053 - 27937086
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattag 195  Q
    ||||||||||||||||||||||||||||||||||    
T  27937053 taggcttaaatatgtatttcatccttgcaattag 27937086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 31006707 - 31006756
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaa 206  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| ||||    
T  31006707 tattttaggtttaaatatgtatttcatccttataattagaggtcgtttaa 31006756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 38475033 - 38475090
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||| | ||||||| |||||  ||||||||||||| |||||    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgta 38475090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 186419 - 186482
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||| |||||||| |||| |||||| ||||| ||||||||| |||| ||||||||||    
T  186419 aggcttaaatatttatttcat-cttgaaattaggggtcgtttaaaaattagtcattgtaatcgtt 186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 28269809 - 28269762
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaat 210  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  28269809 taggcttaaatatgtatttcat-cttgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 37992714 - 37992670
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaat 210  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaat 37992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 40148897 - 40148961
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||| ||||||| |||| ||| ||||||||||| ||  ||||||||||||| |||||||||||    
T  40148897 aggctttaatatgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgtt 40148961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 14194852 - 14194801
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattgg 213  Q
    |||||||||| |||| ||||||||||| |||||| ||||| |||||||||||    
T  14194852 taggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattgg 14194801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 16082979 - 16083038
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||| ||||||| ||| | ||||||||| |||  ||||||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcg 16083038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 194
Target Start/End: Complemental strand, 42265921 - 42265890
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaatta 194  Q
    ||||||||||||||||||||||||||||||||    
T  42265921 aggcttaaatatgtatttcatccttgcaatta 42265890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 11741944 - 11741894
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||| |||||| ||||  |||||||| ||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtc 11741894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 38442075 - 38442129
Alignment:
Q  171 atatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||| |||||||||| |||   |||||||||||||| ||||||||    
T  38442075 atatgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcg 38442129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 13362248 - 13362281
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattag 195  Q
    |||| |||||||||||||||||||||||||||||    
T  13362248 taggtttaaatatgtatttcatccttgcaattag 13362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 11047437 - 11047469
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattag 195  Q
    |||||||||||||||||||| ||||||||||||    
T  11047437 aggcttaaatatgtatttcacccttgcaattag 11047469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 24141451 - 24141515
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||| ||||||| |||| ||| |||||||||| |||  |||||||||||||  ||||||||||    
T  24141451 aggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgtt 24141515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 35920229 - 35920285
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||| ||| ||  |||||| | ||| |||||||||||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgta 35920285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 40150243 - 40150179
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||| ||||||| |||| ||||||||||||| ||||  || ||||||||||  ||||||||||    
T  40150243 aggctttaatatgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgtt 40150179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 21628142 - 21628080
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcg 21628080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 33647382 - 33647328
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  33647382 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 33647328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 30726189 - 30726136
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 30726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 3059685 - 3059633
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 3059633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 8090360 - 8090304
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  8090360 ttttaggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtc 8090304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 33517963 - 33517911
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 33517911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 15115339 - 15115390
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtc 15115390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 30337447 - 30337510
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 30337510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 681158 - 681105
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 681105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 12081069 - 12081017
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  12081069 ttttaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatt 12081017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 26463174 - 26463230
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  26463174 ttttaggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtc 26463230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 30804297 - 30804241
Alignment:
Q  156 atattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  30804297 atattctaggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 30804241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 11434804 - 11434859
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgta 11434859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 17734195 - 17734246
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 17734246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 13379912 - 13379859
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  13379912 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtc 13379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 30337846 - 30337785
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||||||||||  ||||||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcg 30337785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 30725760 - 30725820
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||||  ||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattag-ggtcgtttaaaaattggtctctgtaatcg 30725820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 30803859 - 30803924
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||| ||||||||||||||||||||||||| |||  |||| |||||||||| || |||||||||||    
T  30803859 tagggttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgtt 30803924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 679865 - 679917
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||  ||||| |||||||||||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtc 679917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 12080638 - 12080697
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||||| ||  ||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcg 12080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 15116660 - 15116609
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||| |||||||||||| ||||||||||||| ||||| |||||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtc 15116609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 22617886 - 22617932
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattgg 213  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgg 22617932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 33517537 - 33517595
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||| |||||| | ||| |||||||||||||  ||||||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcg 33517595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 12408601 - 12408548
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||| ||||||| ||| | |||||| ||||||    
T  12408601 taggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtc 12408548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 3059250 - 3059318
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||| |||| ||||||||||||||||||||||||||||  ||||| ||||||  | ||| |||||||||    
T  3059250 tattataggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcg 3059318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 8089442 - 8089494
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| | ||| ||||||||| ||||| |||||||||||||    
T  8089442 aggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtc 8089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 11393233 - 11393181
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||| ||||||||||||| ||| |||||| ||||| |||||||||||||    
T  11393233 aggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtc 11393181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 17734590 - 17734530
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||| |||||| ||||||  ||||| |||||||||| || |||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcg 17734530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 20651008 - 20651060
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||| |||| ||||||||| | ||| ||||||||||||    
T  20651008 taggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggt 20651060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 12407508 - 12407559
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||| ||||||  | ||| |||||||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtc 12407559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 26464627 - 26464576
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||| ||||||||| ||||  ||||||| |||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtc 26464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 21627712 - 21627770
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||| |||||  | ||| |||||||||| || |||||    
T  21627712 aggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgta 21627770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 40758147 - 40758208
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcg 40758208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 26464015 - 26463960
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaat 218  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtcaat 26463960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 33689376 - 33689434
Alignment:
Q  158 attttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtca 216  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  33689376 atttaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtca 33689434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 23458411 - 23458346
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||||||||  ||||||||    
T  23458411 tttaggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcg 23458346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 33689811 - 33689746
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||  |||||||||    
T  33689811 tttaggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcg 33689746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 40758542 - 40758481
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||    
T  40758542 tttaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgta 40758481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 42342789 - 42342850
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaat 223  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaat 42342850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 40033886 - 40033834
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40033834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 9294386 - 9294335
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 9294335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 34142646 - 34142583
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 34142583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 19741321 - 19741259
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 19741259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 51993962 - 51994015
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  51993962 taggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtc 51994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 36150530 - 36150578
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36150578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 53757150 - 53757094
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||| |||||||||||| |||| ||||||||||||| |||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgta 53757094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 2796177 - 2796240
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||||||| ||||  |||||||||||||  ||||||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcg 2796240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 3850555 - 3850504
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtc 3850504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 41558003 - 41558058
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  41558003 ttttaggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggt 41558058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 36418116 - 36418066
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggt 36418066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 46474818 - 46474876
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||||  ||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcg 46474876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 2796533 - 2796468
Alignment:
Q  156 atattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||| ||||||||||||||| |||||||||||||||||  || | ||||||||||||| |||||    
T  2796533 atatttaaggcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgta 2796468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 9292245 - 9292294
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggtc 9292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 35712045 - 35712101
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||||||||| | ||  ||||||||||||| |||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgta 35712101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 51994313 - 51994253
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||| |||||||||||||| | ||| |||||||||||||  ||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcg 51994253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 53756747 - 53756807
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||| |  |||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgtt 53756807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 53856486 - 53856434
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  53856486 aggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtc 53856434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 53856015 - 53856066
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  53856015 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtc 53856066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 9368723 - 9368669
Alignment:
Q  170 aatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatc 224  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||||  |||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatc 9368669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 1079651 - 1079586
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||| ||||||| |||||||| ||||||||| ||||  |||||||||||||  ||||||||||    
T  1079651 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgtt 1079586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 26463635 - 26463680
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattg 26463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 46475205 - 46475160
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattg 46475160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 19740921 - 19740984
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| || | ||||||||| | ||| |||||||||||||  ||||||||    
T  19740921 taggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcg 19740984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 41558306 - 41558263
Alignment:
Q  168 taaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaatt 41558263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 55052675 - 55052613
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||| ||||||| |||||| |||   ||||||||||||| |||||||||||    
T  55052675 ggcttaaatatgtatttgatccttgtaattaggggt-ttttaaaaattggtccatgtaatcgtt 55052613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 23457988 - 23458030
Alignment:
Q  173 atgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||  ||||| |||||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtc 23458030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 41989613 - 41989583
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattag 195  Q
    |||||||||||||||||||||||||||||||    
T  41989613 gcttaaatatgtatttcatccttgcaattag 41989583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 42343156 - 42343102
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||| || |||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgta 42343102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 1078535 - 1078600
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||| ||||||| |||| ||| ||||||||| ||||  |||||||||||||  ||||||||||    
T  1078535 taggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgtt 1078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 9367739 - 9367792
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| |||| | ||||||| ||||| ||||||| |||||    
T  9367739 taggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtc 9367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 43384709 - 43384680
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattag 195  Q
    ||||||||||||||||||||||||||||||    
T  43384709 cttaaatatgtatttcatccttgcaattag 43384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 3849030 - 3849082
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||| | ||||||| |||||||||  |||| |||||||||||||    
T  3849030 aggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtc 3849082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23276410 - 23276350
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||| ||||||| |||||||| ||||||||| ||||  |||||||||||||  ||||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcg 23276350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 25107212 - 25107264
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||| ||||| |||||||| ||||||||| ||||  |||||||||||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtc 25107264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 36417691 - 36417739
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||| |||| ||||||||||| |||||| ||||| |||||||||||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtc 36417739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 34060486 - 34060550
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||||||    
T  34060486 ttaggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcg 34060550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 16388578 - 16388633
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  16388578 ttttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16388633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 33357492 - 33357555
Alignment:
Q  158 attttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||||    
T  33357492 attttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgta 33357555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 39071676 - 39071737
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 39071737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 8316652 - 8316716
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||| |||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgtt 8316716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 12273286 - 12273218
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||    
T  12273286 ttttaggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 12273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 23663944 - 23663881
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcg 23663881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 42803646 - 42803595
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtc 42803595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 8317017 - 8316955
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcg 8316955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 13186059 - 13186121
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||| | ||| ||||||||||||  |||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcg 13186121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 13186491 - 13186437
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  13186491 tttaggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggt 13186437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 40318393 - 40318331
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||| ||| |||||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcg 40318331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 12198948 - 12199001
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  12198948 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 12199001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 12443376 - 12443429
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  12443376 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 12443429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 23663543 - 23663596
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  23663543 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtc 23663596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 23698676 - 23698611
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||  ||||||||    
T  23698676 tttaggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcg 23698611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 4995085 - 4995033
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc 4995033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 20386859 - 20386807
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 20386807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 38862988 - 38862940
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 38862940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 39072074 - 39072018
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||    
T  39072074 ttttaggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtc 39072018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 16388954 - 16388895
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaat 223  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||  |||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaat 16388895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 20385568 - 20385619
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 20385619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 38956100 - 38956049
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 38956049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 1425050 - 1425104
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  1425050 ttaggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 1425104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 22915787 - 22915725
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||| ||| | ||| ||||||||||||| |||||||||    
T  22915787 aggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcg 22915725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 31608946 - 31608884
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||| |||||||||| ||||||||||||||||||||  ||||| ||||||||||||| |||||    
T  31608946 tttttggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgta 31608884  T

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Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 34061757 - 34061699
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||||||| || |||||    
T  34061757 aggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgta 34061699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 36928905 - 36928847
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||| |||||||||||  ||| ||||||||||||| |||||    
T  36928905 aggcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgta 36928847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 4406088 - 4406031
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||| |||||| ||| | ||||||||||||| |||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgta 4406031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 38955703 - 38955764
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||| |||||||||||| | | ||| |||||||||||||| ||||||||    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcg 38955764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 40317966 - 40318011
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 40318011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 34685690 - 34685634
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||| ||||||||||||||||| |||||||||||||| | ||| |||||||||||||    
T  34685690 tttttggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggtc 34685634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 36186496 - 36186448
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaa 208  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  36186496 tttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 7294103 - 7294149
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  7294103 gcttaaatatgtatttcatc-ttgcaattagaggtcgtttaaaaattg 7294149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 12272920 - 12272979
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||| |||||||||||||| | ||| |||||||||||||  ||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcg 12272979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 1425448 - 1425398
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||| ||||| ||||||| |||||||||||| |||||||||||||    
T  1425448 gcttaaatatatatttgatccttgtaattagaggtcgtttaaaaattggtc 1425398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 7313436 - 7313382
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||    
T  7313436 ttaggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtc 7313382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 5960046 - 5960107
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||| ||||||||||||||||||||||| | ||| |||||||||| ||  ||||||||    
T  5960046 ggcttaaacatgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcg 5960107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 9065667 - 9065716
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| ||| |||||| ||||| |||||||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtc 9065716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 30459371 - 30459428
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||||| |||||||  |||| ||||||||| ||| |||||    
T  30459371 ggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgta 30459428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 34177396 - 34177347
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||| ||| |||||| ||||| |||||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtc 34177347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 4994653 - 4994705
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||||||||||| |||||||||| | | | ||||||||||    
T  4994653 tttaggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattg 4994705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 7306398 - 7306450
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||    
T  7306398 aggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtc 7306450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 10749937 - 10749873
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||| ||||||| |||| ||||||||||||| | ||  ||||||||||||| |||||||||||    
T  10749937 aggctttaatatgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgtt 10749873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 34176443 - 34176494
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    |||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  34176443 taggtttaaatatgtatttcatccttgcaatta-tggtcgtttaaaaattggt 34176494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 2535978 - 2535915
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||| |||||||||||| ||| ||||||||| ||||  |||||||||||||  ||||||||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgtt 2535915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 35756580 - 35756634
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||| | ||||||||| ||||  |||||||||||||    
T  35756580 tttaggcttaaatatgtatttcat-catgcaattaggggtcatttaaaaattggtc 35756634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 23698308 - 23698370
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaatta-gaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||| ||||||||||||| | ||||| ||||||||| |||  ||||||||    
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcg 23698370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 30712143 - 30712093
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||| |||||||| ||||| || || |||||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc 30712093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 30719920 - 30719870
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||| |||||||| ||||| || || |||||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc 30719870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 38862618 - 38862648
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaatta 194  Q
    |||||||||||||||||||||||||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaatta 38862648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 2534695 - 2534756
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||  || ||||||||  ||||| ||||||||||||  |||||||||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcg 2534756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 7295361 - 7295304
Alignment:
Q  158 attttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||| |||||||||||||| |||||||||||||  | ||| |||||||| ||||    
T  7295361 attttaggtttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtc 7295304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 9065799 - 9065750
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||||||||||| ||||||||||||||| |||   ||||||||||    
T  9065799 aggcttaaatatgtattccatccttgcaattaggggttatttaaaaattg 9065750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 31608526 - 31608575
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    ||||||||| |||||||||||||||| |||||| | ||| ||||||||||    
T  31608526 aggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaattg 31608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 4405700 - 4405736
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcg 201  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  4405700 gcttaaatatgtatttcattcttgcaattaggggtcg 4405736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 6658282 - 6658224
Alignment:
Q  157 tattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  6658282 tatttttggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtc 6658224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 3555249 - 3555301
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 3555301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 36755517 - 36755465
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36755465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 11163453 - 11163390
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 11163390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 30729621 - 30729672
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtc 30729672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 6588686 - 6588740
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgta 6588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 15848087 - 15848149
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 15848149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 39423945 - 39423895
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 39423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 39498712 - 39498650
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    |||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||| |||||    
T  39498712 ttttaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgta 39498650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 15848519 - 15848466
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  15848519 ttaggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggt 15848466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 2318160 - 2318219
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||||| |||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattag-ggtagtttaaaaattggtctatgtaatcg 2318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 16099453 - 16099401
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 16099401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 36382556 - 36382504
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtc 36382504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 36479719 - 36479779
Alignment:
Q  166 cttaaatatgtatttcatcctt-gcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcg 36479779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 37895346 - 37895398
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtc 37895398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 44045435 - 44045379
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  44045435 ttttaggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtc 44045379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 2318939 - 2318888
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggt 2318888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 21370630 - 21370567
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||||| || ||||| |||||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattgatccatgtattcgtt 21370567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 25231278 - 25231219
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||| |||| ||||||||| ||||| ||||||||||||| |||||    
T  25231278 taggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgta 25231219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 6657876 - 6657938
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatc 224  Q
    ||||||||||||||||||| |||||||||||| | ||||| |||||||||||||  |||||||    
T  6657876 taggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatc 6657938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 10713151 - 10713101
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 10713101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 36382158 - 36382212
Alignment:
Q  161 ttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||| |||||||||||||||||||||||| | ||| |||||||||||||    
T  36382158 ttaggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtc 36382212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 45556111 - 45556173
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||| |||||||||||||| | ||| |||||||||||||  ||||||||    
T  45556111 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcg 45556173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 22051421 - 22051360
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||| ||||||||||||||| | ||||||||| |||  ||||||||    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcg 22051360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 34448225 - 34448172
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||| ||||||||||||||||||||||| ||| | |||||||||||||    
T  34448225 taggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtc 34448172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 36480144 - 36480095
Alignment:
Q  166 cttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtc 36480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 44713799 - 44713852
Alignment:
Q  168 taaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgta 221  Q
    ||||||||||||||||||||| |||||  ||||| |||||||||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgta 44713852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 34447812 - 34447864
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||||||||||| |||||| ||||  |||||||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtc 34447864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 44714193 - 44714142
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    |||||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  44714193 ttttaggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaatt 44714142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 45556476 - 45556424
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| ||||||| |||||| ||||| |||||||||||||    
T  45556476 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtc 45556424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 3556437 - 3556374
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||||  ||||||||||||||||||  ||||| |||||||||||||  ||||||||||    
T  3556437 ggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgtt 3556374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 6307145 - 6307095
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  6307145 ggcttaaatatgtatttcatc-ttgcaattagtggtcgtttaaaaattggtc 6307095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 9076495 - 9076444
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtc 9076444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 10712719 - 10712774
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||| ||||| |||||||||||||||||||||||| | ||| |||||||||||||    
T  10712719 tttagacttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtc 10712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 11163054 - 11163105
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| ||| ||||||||| |||||| |||||||||||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtc 11163105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 25230102 - 25230153
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtc 25230153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 36755094 - 36755143
Alignment:
Q  165 gcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggt 36755143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 39423515 - 39423576
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||| |||||||||||||| |||||  ||||| |||||||||||||  ||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcg 39423576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 43742105 - 43742044
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatc 224  Q
    |||||| |||||||||||| ||| ||||||| ||||||  ||||||||||||| ||||||||    
T  43742105 aggcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatc 43742044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 13692637 - 13692597
Alignment:
Q  175 gtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtc 13692597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 16099055 - 16099115
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatc 224  Q
    ||||||||||||||||| || ||||||||||| ||||  |||||||||||||  |||||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatc 16099115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 28228665 - 28228733
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||| ||||||| |||| ||| ||||||||| ||||  |||||||||||||  ||||||||||    
T  28228665 ttttaggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgtt 28228733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 39498317 - 39498373
Alignment:
Q  171 atatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    |||||||||| ||||||| |||||| ||||| |||||||||||||  ||||||||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgtt 39498373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 44044113 - 44044165
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||| ||||||||| ||| | |||||||||||||    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtc 44044165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 37895772 - 37895725
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggt 214  Q
    ||||||||||||||||||||||||||||  ||||| ||||||| ||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggt 37895725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 6508 - 6456
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 6456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 69393 - 69342
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtc 69342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 68965 - 69025
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatc 224  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||  |||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatc 69025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 37992 - 37930
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||  ||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcg 37930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 37564 - 37615
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  37564 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtc 37615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 139668 - 139733
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    |||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||    
T  139668 tttaggattaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcg 139733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 140066 - 140018
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||| |||||||||||||| ||| | |||||||||||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtc 140018  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 2170 - 2118
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 2118  T

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Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 1767 - 1830
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcg 225  Q
    ||||||||||||||||||| |||||||||||||| ||||| | |||||||||||  ||||||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcg 1830  T

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Target: scaffold0075 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 14818 - 14767
Alignment:
Q  164 ggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtc 14767  T

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Target: scaffold0075; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 14424 - 14476
Alignment:
Q  159 ttttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaatt 211  Q
    |||||||||||||||||||||||||| ||||||||||  |||| |||||||||    
T  14424 ttttaggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaatt 14476  T

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Target: scaffold0775 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 4960 - 5010
Alignment:
Q  162 taggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattg 212  Q
    |||||||||||||||||||||||| | ||||||| ||||| ||||||||||    
T  4960 taggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattg 5010  T

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Target: scaffold0295 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 2558 - 2506
Alignment:
Q  163 aggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||||||||| ||||||||||| | ||| || ||||||||||    
T  2558 aggcttaaatatgtatttcattcttgcaattagggatcgttttaaaattggtc 2506  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 19860 - 19908
Alignment:
Q  167 ttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtc 215  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtc 19908  T

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Target: scaffold0328 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 11574 - 11503
Alignment:
Q  156 atattttaggcttaaatatgtatttcatccttgcaattagaggtcgcttaaaaattggtcaatgtaatcgtt 227  Q
    ||||| |||||||||  |||| ||||||||||||||||||  |||  ||||||||| ||| |||||||||||    
T  11574 atattataggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgtt 11503  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 260997 - 261037
Alignment:
Q  160 tttaggcttaaatatgtatttcatccttgcaattagaggtc 200  Q
    |||||||||||||||| ||||||||| |||||||| |||||    
T  260997 tttaggcttaaatatgcatttcatccctgcaattataggtc 261037  T

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