View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2171_low_16 (Length: 272)

Name: NF2171_low_16
Description: NF2171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2171_low_16
NF2171_low_16
[»] chr3 (22 HSPs)
chr3 (5-260)||(14865716-14865971)
chr3 (5-260)||(12033375-12033629)
chr3 (5-260)||(17131602-17131857)
chr3 (12-259)||(19235002-19235245)
chr3 (135-260)||(23370435-23370560)
chr3 (118-260)||(51301572-51301715)
chr3 (58-247)||(13302185-13302372)
chr3 (58-247)||(13312841-13313028)
chr3 (58-247)||(13323732-13323920)
chr3 (131-204)||(10389429-10389502)
chr3 (131-204)||(10414518-10414591)
chr3 (131-204)||(10421188-10421261)
chr3 (138-231)||(24933787-24933880)
chr3 (51-189)||(17240513-17240652)
chr3 (135-189)||(9534328-9534382)
chr3 (135-189)||(18929246-18929300)
chr3 (135-187)||(20247791-20247843)
chr3 (135-187)||(24192957-24193009)
chr3 (138-190)||(41455097-41455149)
chr3 (177-260)||(10555353-10555434)
chr3 (135-190)||(16801467-16801521)
chr3 (135-189)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (5-260)||(79419-79675)
[»] chr1 (10 HSPs)
chr1 (5-260)||(20851062-20851317)
chr1 (5-260)||(20857689-20857944)
chr1 (5-260)||(21706146-21706401)
chr1 (5-260)||(21710689-21710943)
chr1 (137-231)||(20044910-20045004)
chr1 (116-189)||(18712780-18712854)
chr1 (135-189)||(20437024-20437078)
chr1 (135-189)||(32651573-32651627)
chr1 (138-190)||(41112038-41112090)
chr1 (135-189)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (5-260)||(24320600-24320855)
chr8 (12-189)||(29643386-29643564)
chr8 (135-260)||(44477623-44477749)
chr8 (135-260)||(44492781-44492907)
chr8 (104-189)||(18614240-18614327)
chr8 (51-189)||(23482053-23482192)
chr8 (135-187)||(8727735-8727787)
chr8 (138-190)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (5-260)||(16090945-16091201)
chr7 (5-260)||(29181038-29181294)
chr7 (5-260)||(20906391-20906645)
chr7 (90-260)||(2971209-2971379)
chr7 (131-260)||(14319559-14319688)
chr7 (5-96)||(2966835-2966926)
chr7 (18-250)||(2465246-2465474)
chr7 (131-260)||(14230777-14230906)
chr7 (18-250)||(3857308-3857536)
chr7 (135-260)||(14567204-14567329)
chr7 (137-204)||(31155396-31155463)
chr7 (135-189)||(11382871-11382925)
chr7 (135-189)||(11389348-11389402)
chr7 (135-197)||(21230952-21231014)
chr7 (135-190)||(14422985-14423040)
chr7 (135-189)||(16009577-16009631)
chr7 (138-190)||(12590643-12590695)
chr7 (138-190)||(13007435-13007487)
chr7 (135-191)||(20311050-20311106)
chr7 (135-189)||(13679494-13679548)
chr7 (135-189)||(15168176-15168230)
chr7 (138-190)||(12709843-12709895)
chr7 (138-190)||(13122914-13122966)
chr7 (138-190)||(13743712-13743764)
chr7 (135-187)||(16677296-16677348)
chr7 (135-187)||(17651532-17651584)
[»] chr5 (21 HSPs)
chr5 (5-260)||(19236771-19237025)
chr5 (5-260)||(22461026-22461281)
chr5 (5-260)||(22467650-22467905)
chr5 (18-259)||(20772854-20773090)
chr5 (18-259)||(20781629-20781865)
chr5 (12-259)||(24929862-24930105)
chr5 (12-260)||(28909220-28909466)
chr5 (12-260)||(28945615-28945861)
chr5 (12-260)||(28895972-28896218)
chr5 (12-260)||(28924798-28925044)
chr5 (12-260)||(28889268-28889514)
chr5 (21-198)||(20820105-20820279)
chr5 (21-198)||(20827205-20827379)
chr5 (12-197)||(34829962-34830146)
chr5 (135-255)||(38144472-38144591)
chr5 (51-189)||(18407944-18408083)
chr5 (51-189)||(23111200-23111339)
chr5 (135-191)||(22438746-22438802)
chr5 (135-189)||(19512387-19512441)
chr5 (135-189)||(28370055-28370109)
chr5 (138-190)||(23528634-23528686)
[»] scaffold0072 (1 HSPs)
scaffold0072 (5-260)||(49899-50156)
[»] chr6 (26 HSPs)
chr6 (12-260)||(20007877-20008125)
chr6 (12-259)||(9099005-9099248)
chr6 (18-250)||(21364423-21364650)
chr6 (18-250)||(23968405-23968632)
chr6 (12-260)||(31252300-31252549)
chr6 (137-260)||(11288601-11288721)
chr6 (137-204)||(15458492-15458559)
chr6 (137-204)||(15465087-15465154)
chr6 (135-260)||(34639915-34640041)
chr6 (135-260)||(34646589-34646715)
chr6 (162-260)||(28288442-28288537)
chr6 (135-197)||(10986173-10986235)
chr6 (172-260)||(24563475-24563564)
chr6 (135-190)||(29614146-29614201)
chr6 (135-189)||(4477858-4477912)
chr6 (135-189)||(23839199-23839253)
chr6 (135-197)||(24512836-24512898)
chr6 (138-190)||(12168366-12168418)
chr6 (138-190)||(19287275-19287327)
chr6 (138-190)||(19785869-19785921)
chr6 (138-190)||(19878459-19878511)
chr6 (228-260)||(24641612-24641644)
chr6 (135-190)||(930095-930150)
chr6 (135-190)||(18800438-18800493)
chr6 (137-189)||(9187498-9187550)
chr6 (138-190)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (5-260)||(135309-135563)
[»] chr2 (14 HSPs)
chr2 (5-239)||(25180880-25181114)
chr2 (5-237)||(10447-10679)
chr2 (131-260)||(27207649-27207778)
chr2 (131-260)||(26885179-26885307)
chr2 (12-260)||(23168229-23168480)
chr2 (12-260)||(23579486-23579737)
chr2 (51-189)||(23265058-23265197)
chr2 (51-189)||(23280126-23280265)
chr2 (172-260)||(27366477-27366566)
chr2 (138-260)||(5705952-5706075)
chr2 (135-189)||(6483718-6483772)
chr2 (135-189)||(6487185-6487239)
chr2 (135-189)||(21908360-21908414)
chr2 (138-190)||(26583830-26583882)
[»] chr4 (7 HSPs)
chr4 (5-228)||(16146791-16147015)
chr4 (12-197)||(27906142-27906328)
chr4 (76-187)||(14486601-14486713)
chr4 (138-260)||(53483708-53483831)
chr4 (135-191)||(15408140-15408196)
chr4 (135-190)||(11848114-11848169)
chr4 (138-190)||(8045832-8045884)
[»] scaffold1318 (1 HSPs)
scaffold1318 (51-260)||(1842-2051)
[»] scaffold0348 (1 HSPs)
scaffold0348 (5-195)||(9206-9396)
[»] scaffold0131 (1 HSPs)
scaffold0131 (25-260)||(889-1121)
[»] scaffold0127 (1 HSPs)
scaffold0127 (51-260)||(10156-10364)
[»] scaffold1469 (1 HSPs)
scaffold1469 (12-204)||(1234-1424)
[»] scaffold0001 (1 HSPs)
scaffold0001 (56-260)||(492958-493162)
[»] scaffold0384 (1 HSPs)
scaffold0384 (19-231)||(16023-16233)
[»] scaffold0553 (2 HSPs)
scaffold0553 (135-260)||(10125-10250)
scaffold0553 (162-231)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (135-260)||(1455-1580)
[»] scaffold0029 (3 HSPs)
scaffold0029 (18-250)||(91144-91374)
scaffold0029 (18-250)||(96870-97100)
scaffold0029 (137-190)||(111885-111938)
[»] scaffold0609 (1 HSPs)
scaffold0609 (12-260)||(5786-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (131-260)||(3332-3461)
[»] scaffold0183 (1 HSPs)
scaffold0183 (137-259)||(6-125)
[»] scaffold0261 (1 HSPs)
scaffold0261 (12-197)||(23562-23748)
[»] scaffold0249 (1 HSPs)
scaffold0249 (137-204)||(13880-13947)
[»] scaffold0026 (2 HSPs)
scaffold0026 (135-260)||(111686-111812)
scaffold0026 (135-190)||(11850-11905)
[»] scaffold0034 (1 HSPs)
scaffold0034 (12-197)||(73161-73347)
[»] scaffold0107 (1 HSPs)
scaffold0107 (12-197)||(40524-40711)
[»] scaffold0453 (1 HSPs)
scaffold0453 (131-194)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (51-189)||(16736-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-191)||(135349-135530)
[»] scaffold2054 (1 HSPs)
scaffold2054 (137-190)||(717-770)
[»] scaffold0099 (1 HSPs)
scaffold0099 (12-188)||(12833-13019)
[»] scaffold0146 (1 HSPs)
scaffold0146 (51-189)||(13548-13687)
[»] scaffold0004 (1 HSPs)
scaffold0004 (116-189)||(116877-116951)
[»] scaffold0235 (1 HSPs)
scaffold0235 (136-247)||(22536-22646)
[»] scaffold0129 (1 HSPs)
scaffold0129 (138-260)||(45203-45326)
[»] scaffold0924 (1 HSPs)
scaffold0924 (135-190)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (51-189)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (135-190)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (135-190)||(30858-30913)
[»] scaffold0020 (1 HSPs)
scaffold0020 (116-189)||(101928-102002)
[»] scaffold0796 (2 HSPs)
scaffold0796 (138-231)||(1691-1784)
scaffold0796 (138-231)||(5714-5807)
[»] scaffold0310 (1 HSPs)
scaffold0310 (135-191)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (135-187)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (135-190)||(932-987)
scaffold0456 (135-190)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (135-190)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (131-189)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (135-189)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (135-189)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (138-199)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (137-190)||(1897-1950)
scaffold0117 (137-190)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (138-190)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (138-190)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 14865716 - 14865971
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  14865716 caacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattattttccc 14865815  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865816 aattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 14865915  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865916 atagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 14865971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 12033629 - 12033375
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12033629 caacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaacccttaatttccc 12033530  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033529 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 12033430  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12033429 -aagcacatcaaatcagttcctaagttcttctctcttggtcttctctccttacctt 12033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 17131602 - 17131857
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||    
T  17131602 caacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttccc 17131701  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131702 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 17131801  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131802 aaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 17131857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 12 - 259
Target Start/End: Complemental strand, 19235245 - 19235002
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||||||||    
T  19235245 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaatttta 19235148  T
Q  112 ccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||      
T  19235147 ccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtg 19235050  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 259  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  19235049 cagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 19235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 23370560 - 23370435
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 234  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  235 ctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||    
T  23370460 ctctcttggtcttctctccttgcctt 23370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 51301572 - 51301715
Alignment:
Q  118 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagca 215  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||    | ||||||     
T  51301572 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaaagaaaacacagc- 51301670  T
Q  216 aatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    ||||  |||   |||||||||||||||||||||||||||||||||    
T  51301671 aatcgattctctagttcttctctcttggtcttctctccttgcctt 51301715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 13302372 - 13302185
Alignment:
Q  58 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 156  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||| ||||| ||| ||||||| | || ||||||||||||||||||||| ||||||    
T  13302372 attcttacaccattcctttcgaagtcatcatcaaccctaaattcccca-ttttatcttcaagaacaatgcatttgattaattttcagaaattacatatta 13302274  T
Q  157 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 247  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||||||||||||||||| |||| |||| |||| ||||    
T  13302273 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctcccttgttctt 13302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 13313028 - 13312841
Alignment:
Q  58 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 156  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || ||| |||||| ||| ||||||| | || |||||||||||||| |||||| ||||||    
T  13313028 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-ccctattttatcttcaagaacaatccatttgattaattttcaaaaattacatatta 13312930  T
Q  157 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 247  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||||||||||||||||| |||| |||| |||| ||||    
T  13312929 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctcccttgttctt 13312841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 13323920 - 13323732
Alignment:
Q  58 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatatt 155  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||||||||| ||| ||||||| |  |||| ||||||||||||||||||| |||||    
T  13323920 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-cccaattttatcttcaagaacaatctaatttgattaattttcagaaattacatatt 13323822  T
Q  156 atgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 247  Q
    |||| ||||||||||||||| |||||||||||||||||||   ||| ||  |   ||||||||||||||||| ||||||||| |||| ||||    
T  13323821 atgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaaatcagcaaatcagttcctaggttcttctcccttgttctt 13323732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 10389502 - 10389429
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10389429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 10414591 - 10414518
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10414518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 10421261 - 10421188
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10421188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 24933880 - 24933787
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 231  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| |   | ||||| ||| ||||||||| |||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaggaagaattaacaccgcaaatcagctcctaagtt 24933787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 147  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  17240652 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 17240555  T
Q  148 tatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  17240554 tatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 10555353 - 10555434
Alignment:
Q  177 cacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||| ||| ||||  || ||  ||||||| | |||||| |||||||||||||||||||| |||||||||    
T  10555353 cacccttaccttagaattgtaaacacaaa-agtacgacaaatcaatccctaagctcttctctcttggtcttctc-ccttgcctt 10555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 79675 - 79419
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  79675 caacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccc 79576  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79575 aattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 79476  T
Q  205 ttagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  79475 atagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 79419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 20851317 - 20851062
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||    
T  20851317 caacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttccc 20851218  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851217 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 20851118  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851117 aaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 20857944 - 20857689
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||    
T  20857944 caacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttccc 20857845  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857844 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 20857745  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857744 aaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20857689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 21706146 - 21706401
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||    
T  21706146 caacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttccc 21706245  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706246 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 21706345  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706346 aaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21706401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 21710689 - 21710943
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| | ||||||    
T  21710689 caacatagattaaggaatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaaatttccc 21710787  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710788 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 21710887  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710888 aaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21710943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 231  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||| |   | ||||| ||||||||||||| |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  116 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 32651573 - 32651627
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651573 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 19663571 - 19663517
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663571 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 24320855 - 24320600
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| | ||||||    
T  24320855 caacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaatttccc 24320756  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320755 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 24320656  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320655 aaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 24320600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 29643564 - 29643386
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    ||||||||||||||||| | || |||| |||||||  |  ||||  ||||||| |||  | ||| | |||||||||| |||||||| || | ||||||||    
T  29643564 gattaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaacccttaatt-ctcaatttta 29643466  T
Q  112 ccttaa-gaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
     ||| | ||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643465 tcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 44477623 - 44477749
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 232  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44477721  T
Q  233 ttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||||    
T  44477722 ttctctcttggtcttctctccttgcctt 44477749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 44492781 - 44492907
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 232  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44492879  T
Q  233 ttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||||    
T  44492880 ttctctcttggtcttctctccttgcctt 44492907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 18614240 - 18614327
Alignment:
Q  104 caattttacctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||||| ||| ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614240 caattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 147  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23482192 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23482095  T
Q  148 tatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23482094 tatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 187  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 16090945 - 16091201
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16090945 caacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccc 16091044  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    |||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16091045 aattttaccttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 16091144  T
Q  205 ttagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16091145 atagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 16091201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 29181294 - 29181038
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    ||||||||||||||||||||||||||||||  || |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  29181294 caacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttattttcca 29181195  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29181194 aattttaccttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 29181095  T
Q  205 ttagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29181094 atagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 29181038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 20906645 - 20906391
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||    
T  20906645 caacatagattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaacccttaatt-ccc 20906547  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20906546 aattttaccttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaggacaa 20906447  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
     |||| ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20906446 atagctcagcaaatccgttcctaagttcttctctcttggtcttctccccttgcctt 20906391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 90 - 260
Target Start/End: Original strand, 2971209 - 2971379
Alignment:
Q  90 aacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  190 gaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 2971379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 14319688 - 14319559
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 230  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  231 tcttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||| ||||||||||||||||||    
T  14319588 tcttctctcttagtcttctctccttgcctt 14319559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 2966835 - 2966926
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2966835 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 2465246 - 2465474
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 117  Q
    ||||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| || | ||||||| |||    
T  2465246 gaaatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttaccataa 2465343  T
Q  118 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 217  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||| ||  ||  |||||||    
T  2465344 aaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaagataa--agtgcagcaaa 2465441  T
Q  218 tcagttcctaagttcttctctcttggtcttctc 250  Q
     || || ||||| ||||||||||||||||||||    
T  2465442 ccaatttctaagctcttctctcttggtcttctc 2465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 14230777 - 14230906
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 230  Q
    ||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||  |||||  |||||| ||||||||||    
T  14230777 gattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagt 14230876  T
Q  231 tcttctctcttggtcttctctccttgcctt 260  Q
    ||| ||||||||||||||||||||||||||    
T  14230877 tctcctctcttggtcttctctccttgcctt 14230906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 3857536 - 3857308
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 114  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  3857536 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 3857440  T
Q  115 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 214  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||| |||| ||  ||  ||||    
T  3857439 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc-aagataa--agtgcagc 3857344  T
Q  215 aaatcagttcctaagttcttctctcttggtcttctc 250  Q
    ||| || || ||||| ||||||||||||||||||||    
T  3857343 aaaccaatttctaagctcttctctcttggtcttctc 3857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 14567204 - 14567329
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 234  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  235 ctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||| ||||||||||||    
T  14567304 ctctcttggtcttttctccttgcctt 14567329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 31155396 - 31155463
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 31155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
    ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 191  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 187  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 187  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 19236771 - 19237025
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| |||||||||  |||||||| | ||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||    
T  19236771 caacatagattaagaacacatactaaac-tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttccc 19236869  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236870 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 19236969  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236970 aaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 19237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 22461026 - 22461281
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| | ||||||    
T  22461026 caacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttccc 22461124  T
Q  105 aattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 203  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22461125 aattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 22461224  T
Q  204 attagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |   ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22461225 aaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 22467650 - 22467905
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| | ||||||    
T  22467650 caacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttccc 22467748  T
Q  105 aattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 203  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467749 aattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 22467848  T
Q  204 attagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |   ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22467849 aaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 259
Target Start/End: Original strand, 20772854 - 20773090
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 117  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  20772854 gaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaa 20772951  T
Q  118 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 217  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||    
T  20772952 gaacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaa 20773049  T
Q  218 tcagttcctaagttcttctctcttggtcttctctccttgcct 259  Q
    ||| |||||||| |||||||||||||||||||| ||||||||    
T  20773050 tcaattcctaagctcttctctcttggtcttctc-ccttgcct 20773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 18 - 259
Target Start/End: Original strand, 20781629 - 20781865
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 117  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  20781629 gaaatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaa 20781726  T
Q  118 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 217  Q
    |||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||    
T  20781727 gaacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaa 20781824  T
Q  218 tcagttcctaagttcttctctcttggtcttctctccttgcct 259  Q
    ||| |||||||| |||||||||||||||||||| ||||||||    
T  20781825 tcaattcctaagctcttctctcttggtcttctc-ccttgcct 20781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 259
Target Start/End: Complemental strand, 24930105 - 24929862
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| | |||||||||||||    
T  24930105 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaatttta 24930008  T
Q  112 ccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||  ||      
T  24930007 ccttaagaacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaagataa--agtg 24929910  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 259  Q
    |||||| ||| |||||||| |||||||||||||||||||| ||||||||    
T  24929909 cagcaagtcaattcctaagctcttctctcttggtcttctc-ccttgcct 24929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 28909466 - 28909220
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 110  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28909466 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28909369  T
Q  111 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28909368 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28909270  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28909269 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28909220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 28945861 - 28945615
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 110  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28945861 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28945764  T
Q  111 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28945763 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28945665  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28945664 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28945615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 28896218 - 28895972
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 110  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28896218 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28896121  T
Q  111 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28896120 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28896022  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28896021 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28895972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 28925044 - 28924798
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 110  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28925044 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28924947  T
Q  111 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28924946 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28924848  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28924847 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28924798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 28889514 - 28889268
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 110  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28889514 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28889417  T
Q  111 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28889416 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28889318  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
      |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28889317 atgcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28889268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  21 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 120  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20820201  T
Q  121 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 198  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  21 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 120  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20827301  T
Q  121 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 198  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 34829962 - 34830146
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||| ||||||||| |||||||    |||| ||||||||| | |||| |||||||||||| ||| | ||||| ||| ||  ||||||    
T  34829962 gattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctc--aatttt 34830058  T
Q  111 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
    | ||| ||||||  ||| ||| |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830059 atcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 38144591 - 38144472
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagca-aatcagttcctaagttct 233  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||  ||||| | |  |||| ||||||| |||| |||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga-atgatta-cacagcacaatcggttcctaagttct 38144494  T
Q  234 tctctcttggtcttctctcctt 255  Q
    ||||||||||||||||||||||    
T  38144493 tctctcttggtcttctctcctt 38144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 147  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  18408083 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 18407986  T
Q  148 tatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||||||||| |||||| ||||| || |||||||||||||    
T  18407985 tatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 23111339 - 23111200
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 147  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23111339 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23111242  T
Q  148 tatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23111241 tatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 191  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 50156 - 49899
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||||||||||||||||||||||||| |  || || ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50156 caacatggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccc 50057  T
Q  105 aatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 203  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50056 aatttttaccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 49957  T
Q  204 attagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    | ||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||    
T  49956 aatagcacaacaaaatcagttcctaagttcttctctcttggttttctctctttgcctt 49899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 20008125 - 20007877
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  20008125 gattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaatttta 20008026  T
Q  112 ccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  20008025 ccttaagaacagttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgcaaagacaa-aagca 20007927  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20007926 cagcaaatgagttcctaagttcttctctcttggtcttctctccttgcctt 20007877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 12 - 259
Target Start/End: Complemental strand, 9099248 - 9099005
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||||||||    
T  9099248 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaatttta 9099151  T
Q  112 ccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 210  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||      
T  9099150 ccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtg 9099053  T
Q  211 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 259  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  9099052 cagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 9099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 21364650 - 21364423
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 117  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  21364650 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 21364554  T
Q  118 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 217  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  21364553 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaa 21364456  T
Q  218 tcagttcctaagttcttctctcttggtcttctc 250  Q
     || |||||| ||||||||||||||||||||||    
T  21364455 acaattcctaggttcttctctcttggtcttctc 21364423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 23968632 - 23968405
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 117  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  23968632 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 23968536  T
Q  118 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 217  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  23968535 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaa 23968438  T
Q  218 tcagttcctaagttcttctctcttggtcttctc 250  Q
     || |||||| ||||||||||||||||||||||    
T  23968437 acaattcctaggttcttctctcttggtcttctc 23968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 260
Target Start/End: Original strand, 31252300 - 31252549
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||  | ||||||| |||||||    |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  31252300 gattaagaaatcatacatagcatcaaattacaacacgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 31252396  T
Q  111 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 206  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||        
T  31252397 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaa 31252496  T
Q  207 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    | |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  31252497 aacacagc-aatcggttcctaagttcttctctcttggtcttctctccttgcctt 31252549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 11288721 - 11288601
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 236  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||  | |||||| |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaa-aaacacagc-aatcagttcctaagctcttct 11288624  T
Q  237 ctcttggtcttctctccttgcctt 260  Q
    |||||||||||||| |||||||||    
T  11288623 ctcttggtcttctc-ccttgcctt 11288601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 15458492 - 15458559
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15458559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 15465087 - 15465154
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 34640041 - 34639915
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 232  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34639943  T
Q  233 ttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||||    
T  34639942 ttctctcttggtcttctctccttgcctt 34639915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 34646715 - 34646589
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 232  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34646617  T
Q  233 ttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||||    
T  34646616 ttctctcttggtcttctctccttgcctt 34646589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 28288537 - 28288442
Alignment:
Q  162 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    ||||| ||||| || ||||||||||||||||||||||||||||  | |||||| |||||||||||||| | |||||||||||||||||| |||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaa-aaacacagc-aatcagttcctaagcttttctctcttggtcttctc-ccttgcctt 28288442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 24563475 - 24563564
Alignment:
Q  172 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  |||||||||||||||||||||||||||||||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgcctt 24563564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 24641644 - 24641612
Alignment:
Q  228 agttcttctctcttggtcttctctccttgcctt 260  Q
    |||||||||||||||||||||||||||||||||    
T  24641644 agttcttctctcttggtcttctctccttgcctt 24641612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 135309 - 135563
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||||||||| || | |    
T  135309 caacatagattaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaatt-ctc 135406  T
Q  105 aattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 203  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  135407 aattttacctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaaagaca 135506  T
Q  204 attagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  135507 aatagcacagcaaatcagttcctaagctcttctctcttggtcttctctccttgcctt 135563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 5e-99; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 25181114 - 25180880
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| ||||||||||||| | || |||||||||   |||||||||||||||||||||||| |||||||| | ||||||    
T  25181114 caacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaaatttccc 25181015  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181014 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 25180915  T
Q  205 ttagcacagcaaatcagttcctaagttcttctctc 239  Q
      |||||||||||||||||||||||||||||||||    
T  25180914 aaagcacagcaaatcagttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 10447 - 10679
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| ||||||||||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| | ||||||    
T  10447 caacatagattaagaaatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaatttccc 10546  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10547 aattttaccttaagaacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaaagacaa 10646  T
Q  205 ttagcacagcaaatcagttcctaagttcttctc 237  Q
      |||||||||||||||||||||||| ||||||    
T  10647 aaagcacagcaaatcagttcctaagtccttctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 27207778 - 27207649
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 230  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  231 tcttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||||||    
T  27207678 tcttctctcttggtcttctctccttgcctt 27207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 26885179 - 26885307
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 230  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  231 tcttctctcttggtcttctctccttgcctt 260  Q
    |||||||||||||| |||||||||||||||    
T  26885278 tcttctctcttggttttctctccttgcctt 26885307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 23168480 - 23168229
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23168480 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23168383  T
Q  111 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 205  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23168382 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23168284  T
Q  206 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
     ||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  23168283 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgcctt 23168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 23579737 - 23579486
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23579737 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23579640  T
Q  111 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 205  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23579639 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23579541  T
Q  206 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
     ||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  23579540 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgcctt 23579486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 148  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23265058 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23265156  T
Q  149 atatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23265157 atatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 148  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23280126 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23280224  T
Q  149 atatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23280225 atatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 27366566 - 27366477
Alignment:
Q  172 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  |||||||||||||||||||||||||||||||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgcctt 27366477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 5706075 - 5705952
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 235  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 5705977  T
Q  236 tctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||| |||||    
T  5705976 tctcttggtcttctctcctagcctt 5705952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 7e-98; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 5 - 228
Target Start/End: Complemental strand, 16147015 - 16146791
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  16147015 caacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcca 16146916  T
Q  105 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16146915 aattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 16146816  T
Q  205 ttagcacagc-aaatcagttcctaa 228  Q
     ||||||||| ||||||||||||||    
T  16146815 atagcacagcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 27906142 - 27906328
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  27906142 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctc--aatttt 27906239  T
Q  111 acctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
    | ||| ||||||  ||| |||  |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906240 atcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  76 tcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataa 173  Q
    ||||||||||||| |||||| || |||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||     
T  14486601 tcaaaatcatcatcaaccct-atattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatag 14486699  T
Q  174 tcccacccttacct 187  Q
    || |||||||||||    
T  14486700 tctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 53483708 - 53483831
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 235  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 53483806  T
Q  236 tctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||| |||||    
T  53483807 tctcttggtcttctctcctagcctt 53483831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 191  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 51 - 260
Target Start/End: Complemental strand, 2051 - 1842
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaatta 149  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaatta 1953  T
Q  150 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 249  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  1952 tatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 1853  T
Q  250 ctccttgcctt 260  Q
    |||||||||||    
T  1852 ctccttgcctt 1842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 9206 - 9396
Alignment:
Q  5 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 104  Q
    |||||| |||| |||||||||||||| ||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||||||||||||| || |||    
T  9206 caacatagattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-ccc 9304  T
Q  105 aattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 195  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9305 aattttacttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 25 - 260
Target Start/End: Original strand, 889 - 1121
Alignment:
Q  25 tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagt 124  Q
    ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  889 tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccataagaacagt 986  T
Q  125 tcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttc 224  Q
    | ||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  987 taaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaa-aagcacagcaaatcaattc 1085  T
Q  225 ctaagttcttctctcttggtcttctctccttgcctt 260  Q
    ||| ||||||||||||||||||||||||||||||||    
T  1086 ctaggttcttctctcttggtcttctctccttgcctt 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 51 - 260
Target Start/End: Original strand, 10156 - 10364
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac-cttaagaacagttcaattgattaattttcagaaatta 149  Q
    |||| ||||||||| ||| |  |||||||||| | ||| |||||| |||  ||||||||||  || | ||||| ||||||||||||||||||||||||||    
T  10156 aaacatgattcttacaccatccctttcaaaattagcatcaaccctaatt--cccaattttattctcatgaacaattcaattgattaattttcagaaatta 10253  T
Q  150 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 249  Q
     ||||||||| ||||| ||||||||| ||||||||||||||||||| | ||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  10254 catattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 10353  T
Q  250 ctccttgcctt 260  Q
    |||||||||||    
T  10354 ctccttgcctt 10364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 1234 - 1424
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    ||||| ||||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| |||||||||||||||    
T  1234 gattaggaaatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaatttta 1331  T
Q  112 ccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    |||||||||||||| ||||| ||||||||||||||  ||||||||  |||||||||||  |||||||||||||||||||||||||||||||||    
T  1332 ccttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaa 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 56 - 260
Target Start/End: Complemental strand, 493162 - 492958
Alignment:
Q  56 tgattcttataccttttctttcaaaatcatcatta-acccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatat 152  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||   |||||| ||  ||||||  ||| ||| |||||||||||||||||||||     
T  493162 tgattcttacaccttttctttcaaaatcagcattataccctaattctct--attttatctccaagaactattccattagattaattttcagaaattatac 493065  T
Q  153 attatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctc 252  Q
    |||| || ||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  493064 atta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttctctc 492966  T
Q  253 cttgcctt 260  Q
    ||||||||    
T  492965 cttgcctt 492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 16233 - 16023
Alignment:
Q  19 aaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaag 118  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| ||||||||||||||||||| | || || | ||||| |||||     
T  16233 aaatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaatt-ccaatttttatcttaaa 16137  T
Q  119 aacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 217  Q
    ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |   | ||||| |||||||||    
T  16136 aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaa 16037  T
Q  218 tcagttcctaagtt 231  Q
    |||| |||||||||    
T  16036 tcagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 10250 - 10125
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 234  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  235 ctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||    
T  10150 ctctcttggtcttctctccttgcctt 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 11111 - 11042
Alignment:
Q  162 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 231  Q
    |||||| ||||||||||||||||||||||||||  |   | ||||| ||||||||||||| |||||||||    
T  11111 attgaaggataatcccacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaagtt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 1580 - 1455
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 234  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  235 ctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||    
T  1480 ctctcttggtcttctctccttgcctt 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 87; Significance: 9e-42; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 91374 - 91144
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 114  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  91374 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 91278  T
Q  115 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 214  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||  ||  ||||    
T  91277 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagc 91180  T
Q  215 aaatcagttcctaagttcttctctcttggtcttctc 250  Q
    ||| || || ||||| ||||||||||||||||||||    
T  91179 aaaccaatttctaagctcttctctcttggtcttctc 91144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 97100 - 96870
Alignment:
Q  18 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 114  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  97100 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 97004  T
Q  115 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 214  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||  ||  ||||    
T  97003 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagc 96906  T
Q  215 aaatcagttcctaagttcttctctcttggtcttctc 250  Q
    ||| || || ||||| ||||||||||||||||||||    
T  96905 aaaccaatttctaagctcttctctcttggtcttctc 96870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 6035 - 5786
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||  | ||||||| ||||||||   |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  6035 gattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 5939  T
Q  111 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 206  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||        
T  5938 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaagaa 5839  T
Q  207 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 260  Q
    | |||||| |||| |||||  |||||||||||||||||||||||||||||||||    
T  5838 aacacagc-aatcggttccctagttcttctctcttggtcttctctccttgcctt 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 3461 - 3332
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 230  Q
    ||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  231 tcttctctcttggtcttctctccttgcctt 260  Q
    ||| |||||||||||||||||| |||||||    
T  3361 tctcctctcttggtcttctctcgttgcctt 3332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 6 - 125
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 236  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaagtcaattcctaagctcttct 103  T
Q  237 ctcttggtcttctctccttgcct 259  Q
    |||||||||||||| ||||||||    
T  104 ctcttggtcttctc-ccttgcct 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 23748 - 23562
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||||||||| | ||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23748 gattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctc--aatttt 23651  T
Q  111 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
      ||| ||||||  |||  || ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23650 gtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 13947 - 13880
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 204  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 13880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 111686 - 111812
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 232  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 111784  T
Q  233 ttctctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||||||||||||    
T  111785 ttctctcttggtcttctctccttgcctt 111812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 73161 - 73347
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 110  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||| ||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  73161 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctc--aatttt 73258  T
Q  111 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
    | ||| |||| |  | | ||| |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | |||||||    
T  73259 atcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 40711 - 40524
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | |||||    
T  40711 gattaagaaatcattctgaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaattttta 40612  T
Q  112 ccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 197  Q
     || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  40611 tctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 194  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 147  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  16736 aaacatgattcttaaaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 16833  T
Q  148 tatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  16834 tatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 135349 - 135530
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 111  Q
    |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | |||||    
T  135349 gattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaattttta 135448  T
Q  112 ccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 191  Q
     || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135449 tctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 717 - 770
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 12833 - 13019
Alignment:
Q  12 gattaagaaatcatactaatcatcaaagtacaacattaaaaacct-gattcttataccttttctttcaaaatcat-cattaacccttattttccc--aat 107  Q
    ||||| |||||||||||||||||  || |||||||||| |||||| ||||||||   | |||| |||| |||||| |||||||||| | ||||||  | |    
T  12833 gattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatt 12932  T
Q  108 tttacc-ttaagaacagttcaa---ttgattaa-ttttcagaaattatatattatgactattg-aaagataatcccacccttacctt 188  Q
    |||||| |||||||||||| ||   | |||||| |||| |||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  12933 tttacctttaagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 147  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  13548 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 13645  T
Q  148 tatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  13646 tatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  116 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 22646 - 22536
Alignment:
Q  136 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc-aaatcagttcctaagttctt 234  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || ||||  ||| |  | ||||||| ||||| ||||||| | ||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgc--agaaatattgcacagcaaaatcggttcctaggctctt 22549  T
Q  235 ctctcttggtctt 247  Q
    |||||||||||||    
T  22548 ctctcttggtctt 22536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 45326 - 45203
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 235  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| |||||||    | |||||| ||||  |||   ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 45228  T
Q  236 tctcttggtcttctctccttgcctt 260  Q
    ||||||||||||||||||| |||||    
T  45227 tctcttggtcttctctcctagcctt 45203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 147 - 8
Alignment:
Q  51 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 147  Q
    |||| ||||||||| ||| || |||||||||||| ||  |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  147 aaacatgattcttacaccattcctttcaaaatcagcaacaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 50  T
Q  148 tatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  49 tatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  116 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 1784 - 1691
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 231  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

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Target: scaffold0796; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 5807 - 5714
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 231  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 191  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 932 - 987
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  131 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 34330 - 34276
Alignment:
Q  135 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 189  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34330 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 199  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  137 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 294 - 346
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  138 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 190  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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