View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2173_low_32 (Length: 233)

Name: NF2173_low_32
Description: NF2173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2173_low_32
NF2173_low_32
[»] chr3 (39 HSPs)
chr3 (1-221)||(38456367-38456587)
chr3 (57-103)||(3537425-3537471)
chr3 (57-103)||(39499417-39499463)
chr3 (57-103)||(47789262-47789308)
chr3 (57-101)||(44411972-44412016)
chr3 (57-101)||(49861055-49861099)
chr3 (57-103)||(52620651-52620697)
chr3 (60-102)||(55439807-55439849)
chr3 (59-103)||(517796-517840)
chr3 (58-98)||(3537083-3537123)
chr3 (57-101)||(30121340-30121384)
chr3 (65-101)||(47789619-47789655)
chr3 (60-100)||(55445131-55445171)
chr3 (62-97)||(7661272-7661307)
chr3 (68-103)||(43237520-43237555)
chr3 (62-101)||(49183564-49183603)
chr3 (65-103)||(2420535-2420573)
chr3 (57-111)||(5939589-5939643)
chr3 (65-103)||(32859066-32859104)
chr3 (57-103)||(39115124-39115170)
chr3 (57-103)||(44400918-44400964)
chr3 (57-103)||(48908708-48908754)
chr3 (57-103)||(53620159-53620205)
chr3 (57-103)||(53888705-53888751)
chr3 (74-103)||(1132756-1132785)
chr3 (75-104)||(17642439-17642468)
chr3 (57-102)||(54372728-54372773)
chr3 (57-101)||(3042946-3042990)
chr3 (75-103)||(3043291-3043319)
chr3 (75-103)||(11500978-11501006)
chr3 (75-103)||(35283324-35283352)
chr3 (75-103)||(36796303-36796331)
chr3 (57-101)||(36796644-36796688)
chr3 (75-103)||(41962148-41962176)
chr3 (75-103)||(42583449-42583477)
chr3 (75-103)||(45555507-45555535)
chr3 (65-101)||(45555867-45555903)
chr3 (57-97)||(49682824-49682864)
chr3 (75-103)||(54372402-54372430)
[»] scaffold0028 (1 HSPs)
scaffold0028 (57-103)||(35271-35317)
[»] chr7 (26 HSPs)
chr7 (57-103)||(34651869-34651915)
chr7 (57-101)||(7666982-7667026)
chr7 (59-103)||(38505501-38505545)
chr7 (57-101)||(28437359-28437403)
chr7 (63-103)||(30081236-30081276)
chr7 (65-101)||(38236019-38236055)
chr7 (57-101)||(38505162-38505206)
chr7 (65-103)||(3658684-3658722)
chr7 (63-101)||(4058310-4058348)
chr7 (65-103)||(7667338-7667376)
chr7 (59-97)||(15749116-15749154)
chr7 (63-101)||(16805738-16805776)
chr7 (57-103)||(33871776-33871822)
chr7 (57-103)||(42254187-42254233)
chr7 (57-103)||(42854118-42854164)
chr7 (74-103)||(16805383-16805412)
chr7 (74-103)||(33113459-33113488)
chr7 (60-101)||(46442581-46442622)
chr7 (70-103)||(46611978-46612011)
chr7 (57-101)||(3658329-3658373)
chr7 (57-101)||(23465818-23465862)
chr7 (65-101)||(33406805-33406841)
chr7 (57-101)||(33872219-33872263)
chr7 (75-103)||(42112774-42112802)
chr7 (57-101)||(43189076-43189120)
chr7 (57-101)||(44690082-44690126)
[»] chr5 (21 HSPs)
chr5 (57-103)||(10295705-10295751)
chr5 (59-103)||(9684607-9684651)
chr5 (59-103)||(18670903-18670947)
chr5 (65-103)||(25598585-25598623)
chr5 (65-103)||(38120011-38120049)
chr5 (67-103)||(17093126-17093162)
chr5 (57-97)||(25027141-25027181)
chr5 (57-97)||(38302182-38302222)
chr5 (59-102)||(10437857-10437900)
chr5 (59-102)||(13569260-13569303)
chr5 (65-103)||(1935237-1935275)
chr5 (59-101)||(5772886-5772928)
chr5 (56-102)||(33718399-33718445)
chr5 (74-103)||(4648799-4648828)
chr5 (59-108)||(39649435-39649484)
chr5 (75-103)||(12229301-12229329)
chr5 (75-103)||(32760632-32760660)
chr5 (65-101)||(35700932-35700968)
chr5 (59-103)||(35701624-35701668)
chr5 (65-101)||(35708926-35708962)
chr5 (75-103)||(38302526-38302554)
[»] chr4 (37 HSPs)
chr4 (57-103)||(20534146-20534192)
chr4 (57-103)||(22845048-22845094)
chr4 (57-103)||(22165582-22165628)
chr4 (57-103)||(24280130-24280176)
chr4 (57-103)||(31530242-31530288)
chr4 (57-103)||(38366245-38366291)
chr4 (65-103)||(41844662-41844700)
chr4 (57-97)||(17622295-17622335)
chr4 (59-103)||(29114401-29114445)
chr4 (57-101)||(32060865-32060909)
chr4 (57-101)||(37756537-37756581)
chr4 (57-101)||(38136652-38136696)
chr4 (59-99)||(38137001-38137041)
chr4 (67-103)||(45899511-45899547)
chr4 (65-103)||(7182364-7182402)
chr4 (59-101)||(12709001-12709043)
chr4 (59-101)||(33500392-33500434)
chr4 (57-103)||(33500740-33500786)
chr4 (65-103)||(54806345-54806383)
chr4 (65-102)||(31340658-31340695)
chr4 (57-98)||(50643042-50643083)
chr4 (71-103)||(904436-904468)
chr4 (65-97)||(7182009-7182041)
chr4 (59-99)||(16318491-16318531)
chr4 (59-103)||(16422789-16422833)
chr4 (57-97)||(16535910-16535950)
chr4 (63-103)||(24291611-24291651)
chr4 (59-103)||(28175631-28175675)
chr4 (57-101)||(29114061-29114105)
chr4 (65-101)||(31187267-31187303)
chr4 (75-103)||(32060559-32060587)
chr4 (65-101)||(32648822-32648858)
chr4 (65-101)||(36151189-36151225)
chr4 (65-101)||(38365901-38365937)
chr4 (57-101)||(41363630-41363674)
chr4 (75-103)||(41363995-41364023)
chr4 (57-101)||(55510123-55510167)
[»] chr2 (31 HSPs)
chr2 (57-103)||(13765752-13765798)
chr2 (57-103)||(25955650-25955696)
chr2 (59-103)||(11514914-11514958)
chr2 (59-102)||(43572715-43572758)
chr2 (57-103)||(44137296-44137342)
chr2 (57-109)||(8990773-8990825)
chr2 (65-101)||(14008147-14008183)
chr2 (67-103)||(18826047-18826083)
chr2 (60-103)||(6655988-6656031)
chr2 (68-102)||(3039124-3039158)
chr2 (57-103)||(4003298-4003344)
chr2 (57-103)||(13018294-13018340)
chr2 (59-101)||(13018645-13018687)
chr2 (65-103)||(14008501-14008539)
chr2 (57-103)||(18018415-18018461)
chr2 (57-103)||(31083017-31083063)
chr2 (57-103)||(36567094-36567140)
chr2 (65-103)||(38294115-38294153)
chr2 (65-103)||(40357684-40357722)
chr2 (57-103)||(41099931-41099977)
chr2 (57-103)||(43572360-43572406)
chr2 (62-103)||(16813506-16813547)
chr2 (62-103)||(16852785-16852826)
chr2 (56-101)||(32761438-32761483)
chr2 (75-103)||(4041844-4041872)
chr2 (75-103)||(8411109-8411137)
chr2 (65-101)||(10165287-10165323)
chr2 (57-101)||(15803391-15803435)
chr2 (65-101)||(18780254-18780290)
chr2 (59-103)||(18781640-18781684)
chr2 (75-103)||(44020232-44020260)
[»] chr1 (41 HSPs)
chr1 (57-103)||(33991761-33991807)
chr1 (57-103)||(43571785-43571831)
chr1 (57-101)||(32300274-32300318)
chr1 (59-103)||(36886740-36886784)
chr1 (58-101)||(32299323-32299366)
chr1 (57-103)||(896313-896359)
chr1 (57-102)||(42161871-42161916)
chr1 (57-101)||(1688035-1688079)
chr1 (65-101)||(9595788-9595824)
chr1 (62-98)||(31920172-31920208)
chr1 (59-103)||(34154495-34154539)
chr1 (59-103)||(36269613-36269657)
chr1 (65-101)||(38795192-38795228)
chr1 (65-101)||(39179279-39179315)
chr1 (65-103)||(1523822-1523860)
chr1 (65-103)||(15464038-15464076)
chr1 (57-103)||(23871279-23871325)
chr1 (57-103)||(37649432-37649478)
chr1 (59-101)||(37649783-37649825)
chr1 (57-103)||(41432578-41432624)
chr1 (185-219)||(49858469-49858503)
chr1 (65-103)||(50247823-50247861)
chr1 (57-103)||(50402961-50403007)
chr1 (57-110)||(13255562-13255615)
chr1 (62-103)||(29091957-29091998)
chr1 (58-103)||(40136435-40136480)
chr1 (75-104)||(51246746-51246775)
chr1 (75-103)||(1278349-1278377)
chr1 (57-101)||(2909336-2909380)
chr1 (65-101)||(2925755-2925791)
chr1 (57-101)||(4204597-4204641)
chr1 (57-97)||(7401388-7401428)
chr1 (75-103)||(8156517-8156545)
chr1 (65-101)||(17556540-17556576)
chr1 (65-101)||(26940478-26940514)
chr1 (57-101)||(27500203-27500247)
chr1 (65-101)||(45565356-45565392)
chr1 (75-103)||(49479253-49479281)
chr1 (75-103)||(50476421-50476449)
chr1 (59-99)||(52068307-52068347)
chr1 (65-101)||(52073621-52073657)
[»] chr6 (14 HSPs)
chr6 (58-103)||(29241649-29241694)
chr6 (57-101)||(4909698-4909742)
chr6 (67-103)||(24734757-24734793)
chr6 (60-99)||(32719543-32719582)
chr6 (59-97)||(1567157-1567195)
chr6 (65-103)||(2365770-2365808)
chr6 (67-101)||(5825561-5825595)
chr6 (65-103)||(23094945-23094983)
chr6 (59-103)||(6855505-6855549)
chr6 (65-101)||(26713735-26713771)
chr6 (75-103)||(28551723-28551751)
chr6 (65-101)||(31345187-31345223)
chr6 (75-103)||(31345553-31345581)
chr6 (62-102)||(33590497-33590537)
[»] chr8 (20 HSPs)
chr8 (59-103)||(14581914-14581958)
chr8 (57-101)||(36906408-36906452)
chr8 (59-101)||(79781-79823)
chr8 (65-103)||(1941866-1941904)
chr8 (57-101)||(33230864-33230908)
chr8 (65-101)||(34148398-34148434)
chr8 (57-97)||(34349934-34349974)
chr8 (59-102)||(23932724-23932767)
chr8 (56-103)||(25033598-25033645)
chr8 (57-103)||(1839636-1839682)
chr8 (65-103)||(34272384-34272422)
chr8 (58-103)||(13864908-13864953)
chr8 (58-99)||(27030031-27030072)
chr8 (57-97)||(1111059-1111099)
chr8 (65-101)||(1942205-1942241)
chr8 (65-101)||(3404746-3404782)
chr8 (59-103)||(26772808-26772852)
chr8 (75-103)||(29611872-29611900)
chr8 (75-103)||(36906062-36906090)
chr8 (57-101)||(37659351-37659395)
[»] scaffold0717 (1 HSPs)
scaffold0717 (57-103)||(1798-1844)
[»] scaffold0006 (1 HSPs)
scaffold0006 (62-103)||(59670-59711)
[»] scaffold0051 (2 HSPs)
scaffold0051 (63-103)||(6929-6969)
scaffold0051 (63-103)||(7912-7952)
[»] scaffold1562 (1 HSPs)
scaffold1562 (57-103)||(359-405)
[»] scaffold1158 (1 HSPs)
scaffold1158 (57-103)||(2188-2234)
[»] scaffold0952 (1 HSPs)
scaffold0952 (57-103)||(3485-3531)
[»] scaffold0136 (1 HSPs)
scaffold0136 (59-101)||(2189-2231)
[»] scaffold0031 (1 HSPs)
scaffold0031 (74-103)||(93311-93340)
[»] scaffold0636 (1 HSPs)
scaffold0636 (57-101)||(8610-8654)
[»] scaffold0248 (1 HSPs)
scaffold0248 (59-99)||(363-403)
[»] scaffold0245 (1 HSPs)
scaffold0245 (75-103)||(4026-4054)
[»] scaffold0229 (1 HSPs)
scaffold0229 (75-103)||(4357-4385)
[»] scaffold0128 (2 HSPs)
scaffold0128 (59-103)||(26249-26293)
scaffold0128 (57-101)||(26600-26644)


Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 38456587 - 38456367
Alignment:
Q  1 ttgggtgggtggagtgtcgttacgtgataggtttagtagattatttcaattgtcgacaaagccttcccctcctttcccctccaaactcccaaacaaagcc 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  38456587 ttgggtgggtggagtgtcgttacatgacaggtttagtagattatttcaattgtcgacaaagctctcccctcccttcccctccaaactcccaaacaaagcc 38456488  T
Q  101 taacggtttgggagttgctgattaattgcaactagaataaactgaataattgttactagaattgacagtatattgcaatgaactataagagtgcaccctg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38456487 taacggtttgggagttgctgattaattgcaactagaataaactgaataattgttactagaattgacagtatattgcaatgaactataagagtgcaccctg 38456388  T
Q  201 gaagcagaaagagttctttct 221  Q
    |||||| ||||||||||||||    
T  38456387 gaagcaaaaagagttctttct 38456367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 3537425 - 3537471
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  3537425 caaagccttcccctcccttcccctccaaactcccaaacaaagcctaa 3537471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 39499417 - 39499463
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  39499417 caaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 39499463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 47789308 - 47789262
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  47789308 caaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 47789262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 44412016 - 44411972
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||    
T  44412016 caaagccctcccctcccttcccctccaaactcccaaacaaagcct 44411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 49861055 - 49861099
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||    
T  49861055 caaagccctcccctcccttcccctccaaactcccaaacaaagcct 49861099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 52620697 - 52620651
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  52620697 caaagccctcccctcccctcccctccaaactcccaaacaaagcctaa 52620651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 55439807 - 55439849
Alignment:
Q  60 agccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  55439807 agccctcccctcccttcccctccaaactcccaaacaaagccta 55439849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 517796 - 517840
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||    
T  517796 aagcctttccctcccttcccctccaaactcgcaaacaaagcctaa 517840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 3537123 - 3537083
Alignment:
Q  58 aaagccttcccctcctttcccctccaaactcccaaacaaag 98  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  3537123 aaagccttcccctcccttcccctccaaactcgcaaacaaag 3537083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 30121384 - 30121340
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||    
T  30121384 caaagccctcccctcccctcccctccaaactcccaaacaaagcct 30121340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 47789619 - 47789655
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||||||||||||||||    
T  47789619 tcccctcccttcccctccaaactcccaaacaaagcct 47789655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 55445131 - 55445171
Alignment:
Q  60 agccttcccctcctttcccctccaaactcccaaacaaagcc 100  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  55445131 agccctcccctcccttcccctccaaactcccaaacaaagcc 55445171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 97
Target Start/End: Original strand, 7661272 - 7661307
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||| ||||||||||||||||||||||||||||||    
T  7661272 ccttctcctcctttcccctccaaactcccaaacaaa 7661307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 43237520 - 43237555
Alignment:
Q  68 cctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||| ||||||||||||||||||||||||||||||    
T  43237520 cctcccttcccctccaaactcccaaacaaagcctaa 43237555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 49183603 - 49183564
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  49183603 ccttcccctccattcccctccaaactcacaaacaaagcct 49183564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 2420573 - 2420535
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  2420573 tcccctccattcccctctaaactcccaaacaaagcctaa 2420535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 5939643 - 5939589
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaacggtttgg 111  Q
    ||||||||| || | | |||||||||||||||||||||||||||||  |||||||    
T  5939643 caaagcctttcctttccttcccctccaaactcccaaacaaagcctacgggtttgg 5939589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 32859066 - 32859104
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  32859066 tcccctcccctcccctccaaactcccaaacaaagcctaa 32859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 39115124 - 39115170
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| || |||||||||||| ||||||||||||||    
T  39115124 caaagccatcccctccctttccctccaaactcacaaacaaagcctaa 39115170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 44400918 - 44400964
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||    
T  44400918 caaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 44400964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 48908754 - 48908708
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||    
T  48908754 caaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 48908708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 53620205 - 53620159
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  53620205 caaagccctcacctcccttcccctccaaactcgcaaacaaagcctaa 53620159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 53888705 - 53888751
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || |||  |||||||||||||||||||||||||||||    
T  53888705 caaagcctttccttcccctcccctccaaactcccaaacaaagcctaa 53888751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 1132785 - 1132756
Alignment:
Q  74 ttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||||||||||||||||||||    
T  1132785 ttcccctccaaactcccaaacaaagcctaa 1132756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 17642468 - 17642439
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaac 104  Q
    ||||||||||||||||||||||||||||||    
T  17642468 tcccctccaaactcccaaacaaagcctaac 17642439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 54372728 - 54372773
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||||||||||||| | ||||||| ||||||| |||||||||||||    
T  54372728 caaagccttcccctaccttccccttcaaactcacaaacaaagccta 54372773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 3042990 - 3042946
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||| ||  ||||||||||||||||||||||||||||    
T  3042990 caaagccctcccatctcttcccctccaaactcccaaacaaagcct 3042946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 3043291 - 3043319
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  3043291 tcccctccaaactcccaaacaaagcctaa 3043319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 11500978 - 11501006
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  11500978 tcccctccaaactcccaaacaaagcctaa 11501006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 35283324 - 35283352
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  35283324 tcccctccaaactcccaaacaaagcctaa 35283352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 36796331 - 36796303
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  36796331 tcccctccaaactcccaaacaaagcctaa 36796303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 36796644 - 36796688
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||||    
T  36796644 caaagccctcccctcccttttcctccaaactcccaaacaaagcct 36796688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 41962148 - 41962176
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  41962148 tcccctccaaactcccaaacaaagcctaa 41962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 42583449 - 42583477
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  42583449 tcccctccaaactcccaaacaaagcctaa 42583477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 45555535 - 45555507
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  45555535 tcccctccaaactcccaaacaaagcctaa 45555507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 45555867 - 45555903
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  45555867 tcccttccattcccctccaaactcccaaacaaagcct 45555903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 49682864 - 49682824
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||||| |||||||| ||||||||||||||| ||||||||    
T  49682864 caaagccctcccctcccttcccctccaaactcacaaacaaa 49682824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 54372430 - 54372402
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  54372430 tcccctccaaactcccaaacaaagcctaa 54372402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 35317 - 35271
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  35317 caaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 35271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 34651915 - 34651869
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  34651915 caaagccatcccctcccttcccctccaaactcccaaacaaagcctaa 34651869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 7667026 - 7666982
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||    
T  7667026 caaagccctcccctcccttcccctccaaactcccaaacaaagcct 7666982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 38505501 - 38505545
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  38505501 aagccttcccctcccttcccctccaaactcgcaaacaaagcctaa 38505545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 28437403 - 28437359
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  28437403 caaagccctcccctcccttcccctccaaactctcaaacaaagcct 28437359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 30081276 - 30081236
Alignment:
Q  63 cttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  30081276 cttcccctcccttcccctccaaactcacaaacaaagcctaa 30081236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 38236019 - 38236055
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||||||||||||||||    
T  38236019 tcccctcccttcccctccaaactcccaaacaaagcct 38236055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 38505206 - 38505162
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||| |||  |||||||||||||||||||||||||||    
T  38505206 caaagccttcccttcccctcccctccaaactcccaaacaaagcct 38505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 3658684 - 3658722
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  3658684 tcccctcccctcccctccaaactcccaaacaaagcctaa 3658722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 4058310 - 4058348
Alignment:
Q  63 cttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4058310 cttcccctcccttcccctccaaactcgcaaacaaagcct 4058348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 7667338 - 7667376
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  7667338 tcccctcccctcccctccaaactcccaaacaaagcctaa 7667376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 15749116 - 15749154
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  15749116 aagccttcccctcccttcccctccaaactcgcaaacaaa 15749154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 16805738 - 16805776
Alignment:
Q  63 cttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  16805738 cttcccctcccttcccctccaaactcgcaaacaaagcct 16805776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 33871822 - 33871776
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||| |||  |||||||||||||| ||||||||||||||    
T  33871822 caaagccttcccttcccctcccctccaaactcgcaaacaaagcctaa 33871776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 42254187 - 42254233
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||    
T  42254187 caaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 42254233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 42854164 - 42854118
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| |||||||||||| || ||||||||||||||    
T  42854164 caaagccctcccctcccttcccctccaaattcacaaacaaagcctaa 42854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 16805412 - 16805383
Alignment:
Q  74 ttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||||||||||||||||||||    
T  16805412 ttcccctccaaactcccaaacaaagcctaa 16805383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 33113488 - 33113459
Alignment:
Q  74 ttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||||||||||||||||||||    
T  33113488 ttcccctccaaactcccaaacaaagcctaa 33113459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 46442622 - 46442581
Alignment:
Q  60 agccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||    
T  46442622 agccttcccctcccttcccctccaaactcgcaaccaaagcct 46442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 46611978 - 46612011
Alignment:
Q  70 tcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||||||||| ||||||||||||||    
T  46611978 tcctttcccctccaaactcgcaaacaaagcctaa 46612011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 3658373 - 3658329
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| || ||| | ||||||||||||||||||||||||||||    
T  3658373 caaagccctctccttccttcccctccaaactcccaaacaaagcct 3658329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 23465862 - 23465818
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||| |||||| |||  |||||||||||||||||||||||||||    
T  23465862 caaagtcttcccttcccctcccctccaaactcccaaacaaagcct 23465818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 33406805 - 33406841
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||  |||||||||||||||||||||||||||    
T  33406805 tcccctcccctcccctccaaactcccaaacaaagcct 33406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 33872219 - 33872263
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| ||||||||  |||||||||||||| ||||||||||||    
T  33872219 caaagccctcccctcccctcccctccaaactcgcaaacaaagcct 33872263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 42112802 - 42112774
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  42112802 tcccctccaaactcccaaacaaagcctaa 42112774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 43189076 - 43189120
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| ||| |||| ||||| ||||||||||||||||||||||    
T  43189076 caaagccctcctctcccttcccatccaaactcccaaacaaagcct 43189120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 44690082 - 44690126
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||    
T  44690082 caaagccctcccctcccttcccctccaaattcccaaacagagcct 44690126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 10295705 - 10295751
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10295705 caaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 10295751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 9684651 - 9684607
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||    
T  9684651 aagccttcccttcccttcccctccaaactcccaaacaaagcctaa 9684607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 18670947 - 18670903
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  18670947 aagccttcccctcccttcccctccaaactcacaaacaaagcctaa 18670903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 25598623 - 25598585
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  25598623 tcccctcccttcccctccaaactcccaaacaaagcctaa 25598585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 38120049 - 38120011
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  38120049 tcccctcccttcccctccaaactcccaaacaaagcctaa 38120011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 17093126 - 17093162
Alignment:
Q  67 ccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||| ||||||||||||||||||||||||||||||    
T  17093126 ccctcccttcccctccaaactcccaaacaaagcctaa 17093162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 25027141 - 25027181
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  25027141 caaagccctcccctcccttcccctccaaactcccaaacaaa 25027181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 38302222 - 38302182
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  38302222 caaagccctcccctcccttcccctccaaactcccaaacaaa 38302182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 10437900 - 10437857
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||    
T  10437900 aagccttcctctcccttcccctccaaactcgcaaacaaagccta 10437857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 13569303 - 13569260
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||    
T  13569303 aagcattcccctcccttcccctccaaactcgcaaacaaagccta 13569260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 1935237 - 1935275
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  1935237 tcccctcccttcccctccaaactcgcaaacaaagcctaa 1935275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 5772886 - 5772928
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||||| |||||||||||||||  |||||||||||    
T  5772886 aagccttcccctcccttcccctccaaactcttaaacaaagcct 5772928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 33718399 - 33718445
Alignment:
Q  56 acaaagccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||||||| || | ||| |||||||||||||||||||||||||||||    
T  33718399 acaaagccctctcatcccttcccctccaaactcccaaacaaagccta 33718445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 4648828 - 4648799
Alignment:
Q  74 ttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||||||||||||||||||||    
T  4648828 ttcccctccaaactcccaaacaaagcctaa 4648799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 39649484 - 39649435
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaacggtt 108  Q
    ||||||| |||||| || |||||||||||| |||||||||||||| ||||    
T  39649484 aagcctttccctcccttgccctccaaactcgcaaacaaagcctaagggtt 39649435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 12229329 - 12229301
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  12229329 tcccctccaaactcccaaacaaagcctaa 12229301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 32760660 - 32760632
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  32760660 tcccctccaaactcccaaacaaagcctaa 32760632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 35700968 - 35700932
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||  |||||||||||||||||||||||||||    
T  35700968 tcccctcccctcccctccaaactcccaaacaaagcct 35700932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 35701624 - 35701668
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||| ||||||||  |||||||||||||||||||||||| ||||    
T  35701624 aagccctcccctcccgtcccctccaaactcccaaacaaagtctaa 35701668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 35708926 - 35708962
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  35708926 tcccctcccttcccctccaaactcacaaacaaagcct 35708962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 38302526 - 38302554
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  38302526 tcccctccaaactcccaaacaaagcctaa 38302554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 20534146 - 20534192
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20534146 caaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 20534192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 22845094 - 22845048
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  22845094 caaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 22845048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 22165628 - 22165582
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||    
T  22165628 caaagccttcccttcctctcccctccaaactcacaaacaaagcctaa 22165582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 24280130 - 24280176
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||    
T  24280130 caaagctttcccctcccttcccctcgaaactcccaaacaaagcctaa 24280176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 31530242 - 31530288
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  31530242 caaagccctcccctcccttcccctccaaactctcaaacaaagcctaa 31530288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 38366245 - 38366291
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||||    
T  38366245 caaagccctcccctcccttcctctccaaactcccaaacaaagcctaa 38366291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 41844662 - 41844700
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  41844662 tcccctcccttcccctccaaactcccaaacaaagcctaa 41844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 17622335 - 17622295
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  17622335 caaagccctcccctcccttcccctccaaactcccaaacaaa 17622295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 29114401 - 29114445
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||    
T  29114401 aagccttcccctcccttcccttccaaactcgcaaacaaagcctaa 29114445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 32060865 - 32060909
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||    
T  32060865 caaagccctcccctcccttccactccaaactcccaaacaaagcct 32060909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 37756581 - 37756537
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||    
T  37756581 caaagccctcccctcccttcccctccaaacttccaaacaaagcct 37756537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 38136696 - 38136652
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||    
T  38136696 caaagcctttccttcccttcccctccaaactcccaaacaaagcct 38136652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 38137001 - 38137041
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagc 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  38137001 aagccttcccctcccttcccctccaaactcgcaaacaaagc 38137041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 45899511 - 45899547
Alignment:
Q  67 ccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||| ||||||||||||||||||||||||||||||    
T  45899511 ccctcccttcccctccaaactcccaaacaaagcctaa 45899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 7182364 - 7182402
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  7182364 tcccctcccctcccctccaaactcccaaacaaagcctaa 7182402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 12709001 - 12709043
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  12709001 aagccttcccctccaatcccctccaaactcgcaaacaaagcct 12709043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 33500434 - 33500392
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||    
T  33500434 aagccttcccctcccttcccttccaaactcgcaaacaaagcct 33500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 33500740 - 33500786
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||    
T  33500740 caaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 33500786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 54806383 - 54806345
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  54806383 tcccctcccttcctctccaaactcccaaacaaagcctaa 54806345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 31340695 - 31340658
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  31340695 tcccatcccttcccctccaaactcccaaacaaagccta 31340658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 50643042 - 50643083
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaag 98  Q
    ||||||| |||| ||| |||||||||||||||||||||||||    
T  50643042 caaagccctcccatcccttcccctccaaactcccaaacaaag 50643083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 904436 - 904468
Alignment:
Q  71 cctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||| ||||||||||||||||||||||||||||    
T  904436 ccttccccctccaaactcccaaacaaagcctaa 904468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 7182041 - 7182009
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaa 97  Q
    |||||||| ||||||||||||||||||||||||    
T  7182041 tcccctcccttcccctccaaactcccaaacaaa 7182009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 16318531 - 16318491
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagc 99  Q
    |||||||||||||| |||||||| |||||| ||||||||||    
T  16318531 aagccttcccctcccttcccctcaaaactcgcaaacaaagc 16318491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 16422833 - 16422789
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||| ||||||||| ||||||||||||||| |||||||| |||||    
T  16422833 aagctttcccctcccttcccctccaaactcacaaacaaaacctaa 16422789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 16535910 - 16535950
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  16535910 caaagccctcccctcccttcccatccaaactcccaaacaaa 16535950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 24291611 - 24291651
Alignment:
Q  63 cttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||| ||| |||||||||| |||||||||||||||    
T  24291611 cttcccctcccttcacctccaaacttccaaacaaagcctaa 24291651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 28175631 - 28175675
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| |||| |||||||||| |||||||| |||||    
T  28175631 aagccttcccctcccttcctctccaaactcgcaaacaaaacctaa 28175675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 29114105 - 29114061
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||| || | | ||||||||||||||||||||||||||||    
T  29114105 caaagcctttcctttccttcccctccaaactcccaaacaaagcct 29114061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 31187267 - 31187303
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||  |||||||||||||||||||||||||||    
T  31187267 tcccctcccgtcccctccaaactcccaaacaaagcct 31187303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 32060587 - 32060559
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  32060587 tcccctccaaactcccaaacaaagcctaa 32060559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 32648858 - 32648822
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  32648858 tcccctcccttcccctccaaacccccaaacaaagcct 32648822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 36151225 - 36151189
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| |||||||||||||||||||| |||||||    
T  36151225 tcccctcccttcccctccaaactcccaaataaagcct 36151189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 38365937 - 38365901
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||  |||||||||||||||||||||||||||    
T  38365937 tcccctcccctcccctccaaactcccaaacaaagcct 38365901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 41363674 - 41363630
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||| ||||||||||| ||||||||||||    
T  41363674 caaagccctcccctcccttcgcctccaaactctcaaacaaagcct 41363630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 41363995 - 41364023
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  41363995 tcccctccaaactcccaaacaaagcctaa 41364023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 55510123 - 55510167
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||  |||  |||||||||||||||||||||||||||    
T  55510123 caaagccttccattcccctcccctccaaactcccaaacaaagcct 55510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 13765798 - 13765752
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  13765798 caaagccctcccctcctttctcctccaaactcccaaacaaagcctaa 13765752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 25955696 - 25955650
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  25955696 caaagccctccccttctttcccctccaaactcccaaacaaagcctaa 25955650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 11514958 - 11514914
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  11514958 aagccttcccctcccttcccctccaaactcgcaaacaaagcctaa 11514914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 43572715 - 43572758
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  43572715 aagccttcccctcccttcccctccaaactcgcaaacaaagccta 43572758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 44137296 - 44137342
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  44137296 caaagccctcccttcccttcccctccaaactcccaaacaaagcctaa 44137342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 8990825 - 8990773
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaacggttt 109  Q
    ||||||| |||||| | |||||||||||||||||||||||| ||||| |||||    
T  8990825 caaagccctccccttccttcccctccaaactcccaaacaaaacctaatggttt 8990773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 14008183 - 14008147
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||||||||||||||||    
T  14008183 tcccctcccttcccctccaaactcccaaacaaagcct 14008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 18826083 - 18826047
Alignment:
Q  67 ccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||| ||||||||||||||||||||||||||||||    
T  18826083 ccctcccttcccctccaaactcccaaacaaagcctaa 18826047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 6656031 - 6655988
Alignment:
Q  60 agccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||| ||||||||||||||| || |||||||||||    
T  6656031 agccttcccctcccttcccctccaaactcgcagacaaagcctaa 6655988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 3039124 - 3039158
Alignment:
Q  68 cctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||||| ||||||||||||||||||||||||||||    
T  3039124 cctcctctcccctccaaactcccaaacaaagccta 3039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 4003344 - 4003298
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| |||| |||||||||| ||||||||||||||    
T  4003344 caaagccctcccctcccttccactccaaactcacaaacaaagcctaa 4003298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 13018340 - 13018294
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||    
T  13018340 caaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 13018294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 13018645 - 13018687
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||    
T  13018645 aagccttcccctcccttcccttccaaactcgcaaacaaagcct 13018687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 14008501 - 14008539
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  14008501 tcccctcccttcccctccaaactcccaaagaaagcctaa 14008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 18018461 - 18018415
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  18018461 caaagccctcccatcccttcccctccaaactcccaaacaaagtctaa 18018415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 31083017 - 31083063
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || |||  |||||||||||||||||||||||||||||    
T  31083017 caaagcctttccttcccctcccctccaaactcccaaacaaagcctaa 31083063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 36567140 - 36567094
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||| || |||||||||||    
T  36567140 caaagccctcccctcccttcccctccaaactcacagacaaagcctaa 36567094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 38294115 - 38294153
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  38294115 tcccctcccttcccctccaaactcccaaacaaaacctaa 38294153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 40357684 - 40357722
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  40357684 tcccctcccttcccctccaaacttccaaacaaagcctaa 40357722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 41099977 - 41099931
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||||||  || |||||||| |||||||||||||||||    
T  41099977 caaagccttcccctcccctctcctccaaattcccaaacaaagcctaa 41099931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 43572406 - 43572360
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||    
T  43572406 caaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 43572360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 16813547 - 16813506
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||    
T  16813547 ccttctcctcccttcccctccaaactcgcaaacaaagcctaa 16813506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 16852826 - 16852785
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||    
T  16852826 ccttctcctcccttcccctccaaactcgcaaacaaagcctaa 16852785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 32761438 - 32761483
Alignment:
Q  56 acaaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| |||||||| ||||||||||||||| ||| ||||||||    
T  32761438 acaaagccctcccctcccttcccctccaaactcgcaatcaaagcct 32761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 4041872 - 4041844
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  4041872 tcccctccaaactcccaaacaaagcctaa 4041844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 8411109 - 8411137
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  8411109 tcccctccaaactcccaaacaaagcctaa 8411137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 10165323 - 10165287
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||| |||| |||||||||||||||||||||||||||    
T  10165323 tcccttcctctcccctccaaactcccaaacaaagcct 10165287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 15803391 - 15803435
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||| || |||  |||||||||||||||||||||||||||    
T  15803391 caaagcctttccttcccctcccctccaaactcccaaacaaagcct 15803435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 18780290 - 18780254
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||  |||||||||||||||||||||||||||    
T  18780290 tcccctcccctcccctccaaactcccaaacaaagcct 18780254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 18781640 - 18781684
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||| |||||||| ||||||||||||||| |||||||| |||||    
T  18781640 aagccctcccctcccttcccctccaaactctcaaacaaaacctaa 18781684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 44020260 - 44020232
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  44020260 tcccctccaaactcccaaacaaagcctaa 44020232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 33991761 - 33991807
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  33991761 caaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 33991807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 43571831 - 43571785
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||    
T  43571831 caaagccttcccctcccttcctctccaaactcccaaacaaagcctaa 43571785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 32300274 - 32300318
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||    
T  32300274 caaagccctcccctcccttcccctccaaactcccaaacaaagcct 32300318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 36886784 - 36886740
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  36886784 aagccttcccctcccttcccctccaaactcgcaaacaaagcctaa 36886740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 32299323 - 32299366
Alignment:
Q  58 aaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  32299323 aaagccctcccctcccttcccctccaaactcccaaacaaagcct 32299366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 896359 - 896313
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  896359 caaagccctcccctcccttctcctccaaactcccaaacaaagcctaa 896313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 42161916 - 42161871
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||    
T  42161916 caaagccctcccctctcttcccctccaaactcccaaacaaagccta 42161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 1688079 - 1688035
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  1688079 caaagccctcccctcccttcccctccaaactcccaaacaacgcct 1688035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 9595788 - 9595824
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||||||||||||||||    
T  9595788 tcccctcccttcccctccaaactcccaaacaaagcct 9595824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 31920208 - 31920172
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaag 98  Q
    ||||||||||||||||||||||||||| |||||||||    
T  31920208 ccttcccctcctttcccctccaaactcgcaaacaaag 31920172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 34154495 - 34154539
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||||    
T  34154495 aagccttctcctcccttcccctccaaactcgcaaacaaagcctaa 34154539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 36269657 - 36269613
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||    
T  36269657 aagccttcccctcacttcccctccaaactcgcaaacaaagcctaa 36269613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 38795192 - 38795228
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||||||||||||||||    
T  38795192 tcccctcccttcccctccaaactcccaaacaaagcct 38795228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 39179279 - 39179315
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||||||||||||||||    
T  39179279 tcccctcccttcccctccaaactcccaaacaaagcct 39179315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 1523822 - 1523860
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  1523822 tcccatccattcccctccaaactcccaaacaaagcctaa 1523860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 15464038 - 15464076
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  15464038 tcccctcccttccccttcaaactcccaaacaaagcctaa 15464076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 23871325 - 23871279
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| || ||||||||||||||| |||||||||||    
T  23871325 caaagccctcccctccctttccctccaaactcccagacaaagcctaa 23871279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 37649478 - 37649432
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||    
T  37649478 caaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 37649432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 37649783 - 37649825
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||    
T  37649783 aagccttctcctccattcccctccaaactcgcaaacaaagcct 37649825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 41432624 - 41432578
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| |  ||| ||||||||||||||||||||||||||||||    
T  41432624 caaagcctttctttcccttcccctccaaactcccaaacaaagcctaa 41432578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 49858469 - 49858503
Alignment:
Q  185 ataagagtgcaccctggaagcagaaagagttcttt 219  Q
    |||||| ||||||||||||||||||||||||||||    
T  49858469 ataagattgcaccctggaagcagaaagagttcttt 49858503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 50247823 - 50247861
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  50247823 tcccctcccttcccctccaaactcccaaagaaagcctaa 50247861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 50402961 - 50403007
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| ||| |||| || |||||||||||||||||||||||||||    
T  50402961 caaagccctcctctcccttaccctccaaactcccaaacaaagcctaa 50403007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 13255562 - 13255615
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaacggtttg 110  Q
    ||||||| |||||||| ||| ||||||||||||| ||||||||| || ||||||    
T  13255562 caaagccctcccctcccttctcctccaaactccccaacaaagcccaagggtttg 13255615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 29091998 - 29091957
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||| |||| |||||||||| ||||||||||||||    
T  29091998 ccttcccctcccttcctctccaaactcgcaaacaaagcctaa 29091957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 40136435 - 40136480
Alignment:
Q  58 aaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||| | | ||||||||||||||| ||||||||||||||    
T  40136435 aaagccttccctttccttcccctccaaactcgcaaacaaagcctaa 40136480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 51246746 - 51246775
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaac 104  Q
    ||||||||||||||||||||||||||||||    
T  51246746 tcccctccaaactcccaaacaaagcctaac 51246775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 1278377 - 1278349
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  1278377 tcccctccaaactcccaaacaaagcctaa 1278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 2909336 - 2909380
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||| || | | ||||||||||||||||||||||||||||    
T  2909336 caaagcctttcctttccttcccctccaaactcccaaacaaagcct 2909380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 2925791 - 2925755
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  2925791 tcccctcccttccccttcaaactcccaaacaaagcct 2925755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 4204641 - 4204597
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||  ||  ||||||||||||||||||||||||||||    
T  4204641 caaagccttccattctattcccctccaaactcccaaacaaagcct 4204597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 7401428 - 7401388
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||||| |||||||  ||||||||||||||||||||||||    
T  7401428 caaagccctcccctctcttcccctccaaactcccaaacaaa 7401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 8156517 - 8156545
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  8156517 tcccctccaaactcccaaacaaagcctaa 8156545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 17556576 - 17556540
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  17556576 tcccctcccttcccctccaaactcgcaaacaaagcct 17556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 26940514 - 26940478
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  26940514 tcccctcctctcccctccaaactctcaaacaaagcct 26940478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 27500203 - 27500247
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| |||| |||||||||||||||||| ||||    
T  27500203 caaagccctcccctcccttcctctccaaactcccaaacaatgcct 27500247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 45565356 - 45565392
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  45565356 tcccctcccttcccctccaaactcgcaaacaaagcct 45565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 49479253 - 49479281
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  49479253 tcccctccaaactcccaaacaaagcctaa 49479281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 50476449 - 50476421
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  50476449 tcccctccaaactcccaaacaaagcctaa 50476421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 52068307 - 52068347
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagc 99  Q
    |||||||||||||| |||||||||||||||  |||||||||    
T  52068307 aagccttcccctccattcccctccaaactcggaaacaaagc 52068347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 52073621 - 52073657
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  52073621 tcccctcccttcccctccaaactcgcaaacaaagcct 52073657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 29241694 - 29241649
Alignment:
Q  58 aaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  29241694 aaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 29241649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 4909742 - 4909698
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||    
T  4909742 caaagccctcgcctcccttcccctccaaactcccaaacaaagcct 4909698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 24734793 - 24734757
Alignment:
Q  67 ccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||| ||||||||||||||||||||||||||||||    
T  24734793 ccctcccttcccctccaaactcccaaacaaagcctaa 24734757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 32719543 - 32719582
Alignment:
Q  60 agccttcccctcctttcccctccaaactcccaaacaaagc 99  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  32719543 agccttcccctcccttcccctccaaactcgcaaacaaagc 32719582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 1567195 - 1567157
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  1567195 aagccttcccctcccttcccctccaaactcgcaaacaaa 1567157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 2365770 - 2365808
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  2365770 tcccctcccctcccctccaaactcccaaacaaagcctaa 2365808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 5825561 - 5825595
Alignment:
Q  67 ccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||| ||||||||||||||||||||||||||||    
T  5825561 ccctcccttcccctccaaactcccaaacaaagcct 5825595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 23094983 - 23094945
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  23094983 tcccctcccttccactccaaactcccaaacaaagcctaa 23094945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 6855549 - 6855505
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| ||||| ||||||||| |||||||| |||||    
T  6855549 aagccttcccctcccttcccttccaaactcacaaacaaaacctaa 6855505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 26713771 - 26713735
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  26713771 tcccctcccttcccctccaaactcgcaaacaaagcct 26713735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 28551751 - 28551723
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  28551751 tcccctccaaactcccaaacaaagcctaa 28551723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 31345223 - 31345187
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  31345223 tcccctccgttcccttccaaactcccaaacaaagcct 31345187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 31345553 - 31345581
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  31345553 tcccctccaaactcccaaacaaagcctaa 31345581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 33590497 - 33590537
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||||| |||| ||||||||||||||| |||||||||||||    
T  33590497 ccttccactccattcccctccaaactcgcaaacaaagccta 33590537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 14581914 - 14581958
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  14581914 aagccttcccctcctttcccctgcaaactcgcaaacaaagcctaa 14581958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 36906408 - 36906452
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||    
T  36906408 caaagccctcccctcccttcccctccaaactcccaaacaaagcct 36906452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 79781 - 79823
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  79781 aagccttcccctcccttcccctccaaactcgcaaacaaagcct 79823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 1941904 - 1941866
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  1941904 tcccctcccttcccctccaaactcccaaacaaagcctaa 1941866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 33230908 - 33230864
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||    
T  33230908 caaagccctctcctcccttcccctccaaactcccaaacaaagcct 33230864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 34148434 - 34148398
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| ||||||||||||||||||||||||||||    
T  34148434 tcccctcccttcccctccaaactcccaaacaaagcct 34148398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 34349934 - 34349974
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  34349934 caaagccttccccttccttcccctccaaactcccaaacaaa 34349974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 23932724 - 23932767
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagccta 102  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||    
T  23932724 aagccttcccttcccttcccctccaaactcgcaaacaaagccta 23932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 25033598 - 25033645
Alignment:
Q  56 acaaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||| ||| |||||||| |||||||||||||||||||||||| |||||    
T  25033598 acaatgccctcccctcccttcccctccaaactcccaaacaaaacctaa 25033645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 1839682 - 1839636
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| || ||| ||||||||||||||| ||||||||||||||    
T  1839682 caaagcctttccttcccttcccctccaaactcgcaaacaaagcctaa 1839636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 34272422 - 34272384
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  34272422 tcccctcccttccccttcaaactcccaaacaaagcctaa 34272384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 13864953 - 13864908
Alignment:
Q  58 aaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||| |||||||||||||| ||||||||  ||||||||||||||    
T  13864953 aaagccctcccctcctttcccatccaaactttcaaacaaagcctaa 13864908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 27030072 - 27030031
Alignment:
Q  58 aaagccttcccctcctttcccctccaaactcccaaacaaagc 99  Q
    ||||||||||||||| || ||||| |||||||||||||||||    
T  27030072 aaagccttcccctccctttccctcaaaactcccaaacaaagc 27030031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 1111099 - 1111059
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaa 97  Q
    ||||||| |||| ||| ||||||||||||||||||||||||    
T  1111099 caaagccctcccttcccttcccctccaaactcccaaacaaa 1111059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 1942205 - 1942241
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||| |||||||||||||||| |||||||||||    
T  1942205 tcccctcccttcccctccaaactcctaaacaaagcct 1942241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 3404746 - 3404782
Alignment:
Q  65 tcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||  |||||||||||||||||||||||||||    
T  3404746 tcccctcccctcccctccaaactcccaaacaaagcct 3404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 26772808 - 26772852
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||| |||| || |||||||||||| ||||||||||||||    
T  26772808 aagccttcctctccctttccctccaaactcgcaaacaaagcctaa 26772852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 29611900 - 29611872
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  29611900 tcccctccaaactcccaaacaaagcctaa 29611872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 36906090 - 36906062
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  36906090 tcccctccaaactcccaaacaaagcctaa 36906062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 37659395 - 37659351
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||| |||||||||||| || ||||||||||||    
T  37659395 caaagccctcccctcccttcccctccaaattctcaaacaaagcct 37659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 1798 - 1844
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  1798 caaagccctcccctcccttcccctccaaactctcaaacaaagcctaa 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 59711 - 59670
Alignment:
Q  62 ccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  59711 ccttcccctcccctcccctccaaactcccaaacaaagcctaa 59670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 6929 - 6969
Alignment:
Q  63 cttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  6929 cttcccctcccttcccctccaaactcgcaaacaaagcctaa 6969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 7912 - 7952
Alignment:
Q  63 cttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  7912 cttcccctcccttcccctccaaactcgcaaacaaagcctaa 7952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 359 - 405
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||| ||||||||| ||||    
T  359 caaagccctcccctcccttcccctccaaactctcaaacaaagtctaa 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 2234 - 2188
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||||||| ||||||||||||||| ||||||||| ||||    
T  2234 caaagccctcccctcccttcccctccaaactctcaaacaaagtctaa 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 3531 - 3485
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||| |||| ||  ||||||||||||||||||||||||||||||    
T  3531 caaagccctcccatctcttcccctccaaactcccaaacaaagcctaa 3485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 2189 - 2231
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    |||||||||||||| ||||||||||||||  ||||||||||||    
T  2189 aagccttcccctcccttcccctccaaacttgcaaacaaagcct 2231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 93340 - 93311
Alignment:
Q  74 ttcccctccaaactcccaaacaaagcctaa 103  Q
    ||||||||||||||||||||||||||||||    
T  93340 ttcccctccaaactcccaaacaaagcctaa 93311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 8610 - 8654
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||| |||||||  ||||||||||||| ||||||||||||||    
T  8610 caaagccctcccctctcttcccctccaaacccccaaacaaagcct 8654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 363 - 403
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagc 99  Q
    |||| ||||||||| ||||||||||||||| ||||||||||    
T  363 aagctttcccctcccttcccctccaaactcgcaaacaaagc 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 4054 - 4026
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  4054 tcccctccaaactcccaaacaaagcctaa 4026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 4385 - 4357
Alignment:
Q  75 tcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||||||||||||||||||    
T  4385 tcccctccaaactcccaaacaaagcctaa 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 26293 - 26249
Alignment:
Q  59 aagccttcccctcctttcccctccaaactcccaaacaaagcctaa 103  Q
    |||||||||||||| ||||||| |||||||  |||||||||||||    
T  26293 aagccttcccctcccttccccttcaaactcgtaaacaaagcctaa 26249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 26600 - 26644
Alignment:
Q  57 caaagccttcccctcctttcccctccaaactcccaaacaaagcct 101  Q
    ||||||||| || | | ||||||||||||||||||||||||||||    
T  26600 caaagcctttcctttccttcccctccaaactcccaaacaaagcct 26644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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