View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2176_high_30 (Length: 432)
Name: NF2176_high_30
Description: NF2176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2176_high_30 |
 | |
|
| [»] scaffold0015 (2 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold1494 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
| [»] scaffold0458 (1 HSPs) |
| | |
|
| [»] scaffold0744 (1 HSPs) |
| | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 147 - 359
Target Start/End: Original strand, 28565218 - 28565430
Alignment:
| Q |
147 |
tttattatcgatggcagattaaagcgattctatgatgattggcctgctcttcatggcatattagaatactagatctaatcgtatgtcacttctagaaaat |
246 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
28565218 |
tttattattgatggcagagtaaagcgattctatgatgattggcctgctcttcatggcatattaaaatactagatctaatcgtatgtcacttctagaaaat |
28565317 |
T |
|
| Q |
247 |
tagaattaacgaccaagtttgtgatggaaaattgaaaatttatctttaatttcttcgtcacttataaatttagtgacagatttaaaatagggatttcata |
346 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28565318 |
tagaattaatgaccaagattgtgatggaaaattgaaaatttatctttaatttcttcgtcacttataaatttagtgacagatttaaaatagggatttcata |
28565417 |
T |
|
| Q |
347 |
ttttctttctaaa |
359 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
28565418 |
ttttctttttaaa |
28565430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 16833402 - 16833522
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
16833402 |
atgtaaagcataaatggtaaaaatacaatcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
16833501 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
16833502 |
gttacttttgagcacttatca |
16833522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 38122689 - 38122810
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
38122689 |
atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
38122788 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
38122789 |
gttacttttgagcacttatcaa |
38122810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 12168828 - 12168948
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
12168828 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaaatcactaatttgcctaagttaacacatgaaatat |
12168927 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
12168928 |
gttacttttgagcacttatca |
12168948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 33492851 - 33492967
Alignment:
| Q |
20 |
aaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtta |
119 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||||||| |
|
|
| T |
33492851 |
aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta |
33492950 |
T |
|
| Q |
120 |
cttttgagtacttatca |
136 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
33492951 |
cttttgagcacttatca |
33492967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 13218687 - 13218807
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||||| ||||| |||| |||||| |
|
|
| T |
13218687 |
atgtaaagcataaatggtataaatacactcaaatggtagcttttccttagataactttcaaaacaagtcactaaattacctagattaacacatgaaatat |
13218786 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||| ||||||| | |||||| |
|
|
| T |
13218787 |
gttagttttgagcagttatca |
13218807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 39453462 - 39453346
Alignment:
| Q |
19 |
taaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtt |
118 |
Q |
| |
|
|||||||||||||| |||| |||| |||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||| |||| | |||| || |
|
|
| T |
39453462 |
taaagcataaatggcaaaattacaa-caaatggtagtttttccttagataacttgcaaaacaagtcactaaaatacctaaattaacacataacatatatt |
39453364 |
T |
|
| Q |
119 |
acttttgagtacttatca |
136 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
39453363 |
acttttgagcacttatca |
39453346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 157 - 416
Target Start/End: Original strand, 28560187 - 28560439
Alignment:
| Q |
157 |
atggcagattaaagcgattctatgatgattggcctgctcttcatggcatattagaatactagatctaatcgtatgtcacttctagaaaattagaattaac |
256 |
Q |
| |
|
|||| ||| |||||| ||| ||||||| |||||||||||||| || |||| | | ||||||||||| ||||||||||||||||||| || |||||| |
|
|
| T |
28560187 |
atggtagagtaaagctgttccatgatgaatggcctgctcttcaaggtctattgaacttctagatctaattgtatgtcacttctagaaaa-tataattaat |
28560285 |
T |
|
| Q |
257 |
gaccaag-tttgtgatgg--aaaattgaaaatttatctttaatttcttcgtcacttataaatttagtgacagatttaaaatagggatttcatattttctt |
353 |
Q |
| |
|
||||||| || |||| | |||| || |||||| ||| |||||| || ||||| |||||||||||||||| ||| || || |||||||||||||||| |
|
|
| T |
28560286 |
gaccaagattaatgattgaaaaaaatg-aaatttctctctaatttatttgtcac---taaatttagtgacagaattagaa-agagatttcatattttctt |
28560380 |
T |
|
| Q |
354 |
tctaaattttgttcactaatttcatttttattctagaagtgcttacattggctctgtatatgt |
416 |
Q |
| |
|
|||||| ||| || || ||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
28560381 |
tctaaaattt----acatcattaatttttattctagaagtgcttactttggttctgtatatgt |
28560439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 25242523 - 25242406
Alignment:
| Q |
19 |
taaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtt |
118 |
Q |
| |
|
|||||||||||||||||||| | | ||| |||||||||||||| |||||||||| ||||||||| || | |||||||||| |||| |||||||| |
|
|
| T |
25242523 |
taaagcataaatggtaaaaaaatgcaacaatagtagcttttccttagataacttgcagaacaagtcattaaaatgcctaaattaacacatagaatatgtt |
25242424 |
T |
|
| Q |
119 |
acttttgagtacttatca |
136 |
Q |
| |
|
| ||||||| |||||||| |
|
|
| T |
25242423 |
agttttgagcacttatca |
25242406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 16129115 - 16129000
Alignment:
| Q |
20 |
aaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtta |
119 |
Q |
| |
|
|||||||||||||| ||| |||| |||||| | ||||||||||| |||||||||||||||||||| || | |||| |||| |||| ||| ||| || |
|
|
| T |
16129115 |
aaagcataaatggtcaaattacaa-caaatgattgcttttccttagataacttgcaaaacaagtcattaaaatgcctattttaacacatgaaagatggta |
16129017 |
T |
|
| Q |
120 |
cttttgagtacttatca |
136 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
16129016 |
cttttgagcacttatca |
16129000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 24835268 - 24835146
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
24835268 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
24835169 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
24835168 |
gttacttttgagcacttatcaat |
24835146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 11723928 - 11724050
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
11723928 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
11724027 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
11724028 |
gttacttttgagcacttatcaat |
11724050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 30607833 - 30607954
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
30607833 |
atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
30607932 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
30607933 |
gttacttttgagcacttatcaa |
30607954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 7314494 - 7314374
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
7314494 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
7314395 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
7314394 |
gttacttttgagcacttatca |
7314374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 14344001 - 14343881
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
14344001 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
14343902 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
14343901 |
gttacttttgagcacttatca |
14343881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 33434116 - 33433996
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
33434116 |
atgtaaagcataaatggtaaaaatacactcaaatggtaacttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
33434017 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||| || |||||||| |
|
|
| T |
33434016 |
gttacttttaagcacttatca |
33433996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 34455703 - 34455583
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
34455703 |
atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
34455604 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
34455603 |
gttacttttgagcacttatca |
34455583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 11766270 - 11766143
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatta |
110 |
Q |
| |
|
|||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||| |||| |||| | |
|
|
| T |
11766270 |
cagacatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacgagtcactaatttgcctaagttaacacatga |
11766171 |
T |
|
| Q |
111 |
aatatgttacttttgagtacttatcaat |
138 |
Q |
| |
|
||||||||||||||||| |||||||||| |
|
|
| T |
11766170 |
aatatgttacttttgagcacttatcaat |
11766143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 9403829 - 9403709
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
9403829 |
atgtaaagcataaatagtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
9403730 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
9403729 |
gttacttttgagcacttatca |
9403709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 6269431 - 6269305
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaa-tacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatt |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||| || || |||| |||| |||| |
|
|
| T |
6269431 |
cagacatgtaaagcataaatggtaaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatg |
6269332 |
T |
|
| Q |
110 |
aaatatgttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||||||||| |||||||| |
|
|
| T |
6269331 |
aaatatgttacttttgagcacttatca |
6269305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 30422298 - 30422184
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||| |||| ||| | ||||||||| ||||||||| ||||||||||||||||||||| || | |||||||||| |||| |||||| |
|
|
| T |
30422298 |
atgtaaagcataaatggcaaaattacgat-aaatggtagtttttccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaaatat |
30422200 |
T |
|
| Q |
116 |
gttacttttgagtact |
131 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
30422199 |
attacttttgagtact |
30422184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 34870317 - 34870437
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatta |
110 |
Q |
| |
|
|||| |||||||||||||||||||||||| || ||| || ||| ||||||||| ||||||||||||||||| ||| || | |||| ||||| |||| | |
|
|
| T |
34870317 |
cagacatgtaaagcataaatggtaaaaatgcaa-caattgatagtttttccttagataacttgcaaaacaagccactaaaatgcctagattaacacataa |
34870415 |
T |
|
| Q |
111 |
aatatgttacttttgagtactt |
132 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
34870416 |
aatatgttacttttgagcactt |
34870437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 42748256 - 42748295
Alignment:
| Q |
44 |
tcaaatggtagcttttccttatataacttgcaaaacaagt |
83 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
42748256 |
tcaaattgtagcttttccttaaataacttgcaaaacaagt |
42748295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 29223223 - 29223101
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
29223223 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
29223124 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
29223123 |
gttacttttgagcacttatcaat |
29223101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 29336522 - 29336400
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
29336522 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
29336423 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
29336422 |
gttacttttgagcacttatcaat |
29336400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 8684092 - 8684213
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaa-atacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaata |
114 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| ||||| |
|
|
| T |
8684092 |
atgtaaagcataaatggtaaaaaatacactcaaacggtagcttttccttagataacttgcaaaacaagtcactaattttcctaagttaacacatgaaata |
8684191 |
T |
|
| Q |
115 |
tgttacttttgagtacttatca |
136 |
Q |
| |
|
| ||||||||||| |||||||| |
|
|
| T |
8684192 |
ttttacttttgagcacttatca |
8684213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 32522495 - 32522382
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
32522495 |
atgtaaagcataaatggtataaatacactcaaatgatagcttttccttagataacttgcaaaacaagtca---------ctaaattaacacataaaatat |
32522405 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
32522404 |
gttacttttgagcacttatcaat |
32522382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 36668492 - 36668611
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||||| || ||| || ||||||||||||| ||||||||||||||||| ||| || | |||| ||||| |||| |||||| |
|
|
| T |
36668492 |
atgtaaagcataaatggtaaaaatgcaa-caattgatagcttttccttagataacttgcaaaacaagccactaaaatgcctagattaacacataaaatat |
36668590 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
36668591 |
gttgcttttgagcacttatca |
36668611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 29226794 - 29226728
Alignment:
| Q |
71 |
ttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||||||| ||||| ||||| |||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
29226794 |
ttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatcaa |
29226728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 29340093 - 29340027
Alignment:
| Q |
71 |
ttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||||||| ||||| ||||| |||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
29340093 |
ttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatcaa |
29340027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 24663673 - 24663715
Alignment:
| Q |
94 |
cctaaattaatacattaaatatgttacttttgagtacttatca |
136 |
Q |
| |
|
|||| ||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
24663673 |
cctagattaacacataaaatatgttacttttgagtacttatca |
24663715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 31757798 - 31757713
Alignment:
| Q |
53 |
agcttttccttatataa-cttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatcaa |
137 |
Q |
| |
|
||||||||| || |||| ||||||||||||||||| || | |||||| ||| |||| |||||| | ||||||||| ||||||||| |
|
|
| T |
31757798 |
agcttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatcaa |
31757713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 44432673 - 44432798
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatta |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| | |
|
|
| T |
44432673 |
cagacatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatga |
44432772 |
T |
|
| Q |
111 |
aatatgttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
44432773 |
aatatgttacttttgagcacttatca |
44432798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 42533598 - 42533719
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| |||| |||||| |
|
|
| T |
42533598 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttagcacatgaaatat |
42533697 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
42533698 |
gttacttttgagcacttatcaa |
42533719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 5274288 - 5274410
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
5274288 |
atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
5274387 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
5274388 |
gttacttttgagcacttatcaat |
5274410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 22047256 - 22047136
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
22047256 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaaatcactaatttgcctaagttaacacatgaaatat |
22047157 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
22047156 |
gttacttttgagcacttatca |
22047136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 55326283 - 55326162
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||||| || | |||| |||||||||| |||||| |
|
|
| T |
55326283 |
atgtaaagcgtaaatggtacaaatacactcaaatggtagtttttccttagataacttgcagaacaagtcactaaacttcctagattaatacataaaatat |
55326184 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
55326183 |
gttacttttgagcacttatcaa |
55326162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 4839789 - 4839909
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||| |||| |||| ||||| |||| |||| |||||| |
|
|
| T |
4839789 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttcctcagataacttgcaaaacaaatcactaattcgcctaagttaacacatgaaatat |
4839888 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
4839889 |
gttacttttgagcacttatca |
4839909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 46692791 - 46692912
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| || | |||| ||||| |||| |||||| |
|
|
| T |
46692791 |
atgtaaagcataaatggtataaatacactcaaatgatagcttttccttagataacttgcaaaacaagtcactaaaatgcctagattaacacataaaatat |
46692890 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
46692891 |
attac-tttgagcacttatcaat |
46692912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 6639477 - 6639356
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||| | |||||||||| |||| |||||| |
|
|
| T |
6639477 |
atgtaaagcataaatggtaaaattacaacaagttggtagcttttccttagataacttgcaaaacaagtcaccaaaatgcctaaattaacacatgaaatat |
6639378 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
||||| ||||| ||||||||| |
|
|
| T |
6639377 |
attactcttgagcacttatcaa |
6639356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 26069189 - 26069069
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaat-ggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaata |
114 |
Q |
| |
|
|||||||||||||||||||||| |||| || | |||||||||| |||| |||||||||| |||||||||| || | |||| ||||| |||| ||||| |
|
|
| T |
26069189 |
atgtaaagcataaatggtaaaataacac--aattaggtagctttttcttagataacttgcagaacaagtcactaaaatgcctagattaacacataaaata |
26069092 |
T |
|
| Q |
115 |
tgttacttttgagtacttatcaa |
137 |
Q |
| |
|
||||||||||||| ||||||||| |
|
|
| T |
26069091 |
tgttacttttgagcacttatcaa |
26069069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 8894342 - 8894226
Alignment:
| Q |
19 |
taaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtt |
118 |
Q |
| |
|
|||||||||||||| | || |||| |||||| |||||||| ||||| ||||||||||||||||||||| || | |||||||||| |||| |||||| | |
|
|
| T |
8894342 |
taaagcataaatggcataattaca-tcaaattgtagctttaccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaaatatatc |
8894244 |
T |
|
| Q |
119 |
acttttgagtacttatca |
136 |
Q |
| |
|
| ||||||| |||||||| |
|
|
| T |
8894243 |
agttttgagcacttatca |
8894226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 19248436 - 19248556
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||||| || ||| || ||| ||||||||| ||||||||||||||||| ||| || | |||| ||||| |||| |||| | |
|
|
| T |
19248436 |
atgtaaagcataaatggtaaaaatgcaa-caattgatagattttccttagataacttgcaaaacaagccactaaagtgcctagattaacacataaaatgt |
19248534 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
||| |||||||| ||||||||| |
|
|
| T |
19248535 |
gttgcttttgagcacttatcaa |
19248556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 40996292 - 40996408
Alignment:
| Q |
20 |
aaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttg-caaaacaagtcaccaatttacctaaattaatacattaaatatgtt |
118 |
Q |
| |
|
|||||||||||||| ||| |||| | ||||| | ||||||||||| |||||||| ||||||||||||| || |||||| |||| |||| ||| || | |
|
|
| T |
40996292 |
aaagcataaatggtcaaattacaat-aaatgattgcttttccttagataacttgacaaaacaagtcactaaaatacctattttaacacatgaaagataat |
40996390 |
T |
|
| Q |
119 |
acttttgagtacttatca |
136 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
40996391 |
acttttgagcacttatca |
40996408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 35417446 - 35417561
Alignment:
| Q |
20 |
aaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtta |
119 |
Q |
| |
|
|||||||||||||| ||| |||| |||||| | ||||||||||| |||| |||||||||||||||| || | ||| | |||| |||| ||| || || |
|
|
| T |
35417446 |
aaagcataaatggtcaaattacaa-caaatgattgcttttccttagataatttgcaaaacaagtcactaaaatgccttatttaacacatgaaagatagta |
35417544 |
T |
|
| Q |
120 |
cttttgagtacttatca |
136 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
35417545 |
cttttgagcacttatca |
35417561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 3298316 - 3298191
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatta |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| | |
|
|
| T |
3298316 |
cagacatgtaaagcataaatggtaaaaataaactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatga |
3298217 |
T |
|
| Q |
111 |
aatatgttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
3298216 |
aatatgttacttttgagcacttatca |
3298191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 27347556 - 27347436
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
27347556 |
atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
27347457 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
27347456 |
gttacttttgagcacttatca |
27347436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 28926796 - 28926918
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
28926796 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaaaaagtcactaatttgcctaagttaacacatgaaatat |
28926895 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
28926896 |
gttacttttgagcacttatcaat |
28926918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 27353636 - 27353515
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
27353636 |
atgtaaagcataaatggtaaaattgcactcaaatgatagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
27353537 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
27353536 |
gttacttttgagcacttatcaa |
27353515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 22180019 - 22179899
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||| ||||| |||| ||| |||||| |
|
|
| T |
22180019 |
atgtaaagcataaatggtaaaattacactcaaatggtagattttccttagataacttgcgaaacaagtcactaatttgcctaagttaacgcataaaatat |
22179920 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
22179919 |
gttacttttgagcacttatca |
22179899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 8744020 - 8744141
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
8744020 |
atgtaaagcataaataataatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcaataatttgcctaagttaacacatgaaatat |
8744119 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
8744120 |
gttacttttgagcacttatcaa |
8744141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 9068819 - 9068939
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
9068819 |
atgtaaagcataaatggtaaagttgcactcaaatggtagcttttccttggataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
9068918 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||| | |||||||| |
|
|
| T |
9068919 |
gttacttttgggcacttatca |
9068939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 36737513 - 36737633
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||| | ||||| ||| || |||| |||||||| |||||||||| ||||||||||||| | |||| ||||| |||| |||||| |
|
|
| T |
36737513 |
atgtaaagcataaatggtatagatacaa-caattgatagcctttccttagataacttgcagaacaagtcaccaaaatgcctagattaacacataaaatat |
36737611 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
| ||||||| || ||||||||| |
|
|
| T |
36737612 |
ggtactttttagcacttatcaa |
36737633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 1606716 - 1606594
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatta |
110 |
Q |
| |
|
|||| ||||||| |||||||||||||| |||| ||| || ||||||| |||| |||||||||| |||||||||| || | |||||||||| |||| | |
|
|
| T |
1606716 |
cagacatgtaaaacataaatggtaaaagtacaa-caattgaaagctttttcttagataacttgcagaacaagtcactaaaatgcctaaattaacacatga |
1606618 |
T |
|
| Q |
111 |
aatatgttacttttgagtacttat |
134 |
Q |
| |
|
||||| ||||||||||| |||||| |
|
|
| T |
1606617 |
aatatattacttttgagcacttat |
1606594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 16957972 - 16957897
Alignment:
| Q |
61 |
cttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatca |
136 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| | |||| ||||| ||| |||||||||||||||||| |||||||| |
|
|
| T |
16957972 |
cttagataacttgcaaaacaagtcactaatatgcctagattaacgcataaaatatgttacttttgagcacttatca |
16957897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 28369642 - 28369584
Alignment:
| Q |
79 |
caagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||| ||||||||||| |||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
28369642 |
caagtcactaatttacctaagttaacacatgaaatatgttacttttgagcacttatcaa |
28369584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 24040117 - 24040002
Alignment:
| Q |
20 |
aaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtta |
119 |
Q |
| |
|
|||||||||||||| ||| |||| |||||| | ||||||||||||||||||| ||||||||||||| || | |||| |||| |||| ||| || || |
|
|
| T |
24040117 |
aaagcataaatggtcaaattacaa-caaatgattgcttttccttatataacttacaaaacaagtcactaaaatgcctattttaacacatgaaagataata |
24040019 |
T |
|
| Q |
120 |
cttttgagtacttatca |
136 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
24040018 |
cttttgagcacttatca |
24040002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 4435537 - 4435622
Alignment:
| Q |
53 |
agcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatcaat |
138 |
Q |
| |
|
||||||||| || |||||||||||||||| |||| || | |||||||||| ||| |||||| | ||||||||| |||||||||| |
|
|
| T |
4435537 |
agcttttccatagataacttgcaaaacaaatcactaaagtgcctaaattaacacaagaaatatatcacttttgagcacttatcaat |
4435622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 21687462 - 21687378
Alignment:
| Q |
53 |
agcttttccttatataa-cttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||| || |||| ||||||||||||||||| || | |||||| ||| |||| |||||| | ||||||||| |||||||| |
|
|
| T |
21687462 |
agcttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatca |
21687378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 21691786 - 21691702
Alignment:
| Q |
53 |
agcttttccttatataa-cttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||| || |||| ||||||||||||||||| || | |||||| ||| |||| |||||| | ||||||||| |||||||| |
|
|
| T |
21691786 |
agcttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatca |
21691702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 89; Significance: 9e-43; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 9934637 - 9934757
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |||| |||| |||||| |
|
|
| T |
9934637 |
atgtaaagcataaatggtaaaaatacactcaaatggtagtttttccttagataacttgcaaaacaagtcactaatttacctaagttaacacatgaaatat |
9934736 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||| || |||||||| |
|
|
| T |
9934737 |
gttacttttaagcacttatca |
9934757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 26511153 - 26511273
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
26511153 |
atgtaaagcataaatggtaaaattatactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
26511252 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
26511253 |
gttacttttgagcacttatca |
26511273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 26516269 - 26516389
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
26516269 |
atgtaaagcataaatggtaaaattatactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
26516368 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
26516369 |
gttacttttgagcacttatca |
26516389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 34006014 - 34005892
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
34006014 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcatttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
34005915 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
34005914 |
gttacttttgagcacttatcaat |
34005892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 3538557 - 3538437
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
3538557 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacgagtcactaatttgcctaagttaacacatgaaatat |
3538458 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
3538457 |
gttacttttgagcacttatca |
3538437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 24161877 - 24161997
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaa-atacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaata |
114 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| |||| |||| || | |
|
|
| T |
24161877 |
atgtaaagcataaatggtaaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtctctaatttgcctaagttaacacat--aaaa |
24161974 |
T |
|
| Q |
115 |
tgttacttttgagtacttatcaa |
137 |
Q |
| |
|
||||||||||||| ||||||||| |
|
|
| T |
24161975 |
tgttacttttgagcacttatcaa |
24161997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 31131392 - 31131276
Alignment:
| Q |
19 |
taaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtt |
118 |
Q |
| |
|
|||||||||||||||| ||||||| ||| || ||| ||||||||| ||||||||||||||||||||| || | |||| ||||| |||| ||||||||| |
|
|
| T |
31131392 |
taaagcataaatggtataaatacaa-caattgatagattttccttagataacttgcaaaacaagtcactaaaatgcctagattaacacataaaatatgtt |
31131294 |
T |
|
| Q |
119 |
acttttgagtacttatca |
136 |
Q |
| |
|
|||||| || |||||||| |
|
|
| T |
31131293 |
acttttaagcacttatca |
31131276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 26603734 - 26603624
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||| ||| ||||| ||||||||| ||||||||||||||||||||| || | |||||||||| |||| |||||| |
|
|
| T |
26603734 |
atgtaaagcataaatggtaaaagtacaa-caattggtacattttccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaaatat |
26603636 |
T |
|
| Q |
116 |
gttacttttgag |
127 |
Q |
| |
|
| ||||||||| |
|
|
| T |
26603635 |
atcacttttgag |
26603624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 15641833 - 15641714
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||||| || ||||||| |||| | | || || |
|
|
| T |
15641833 |
atgtaaagcataaatggtaaaagtacaa-caattggtagcttttccttagataacttgcagaacaagtcactaaaatacctaatttaacataagaattaa |
15641735 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
15641734 |
attacttttgagcacttatca |
15641714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 2298378 - 2298287
Alignment:
| Q |
44 |
tcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatc |
135 |
Q |
| |
|
|||||| |||| ||||||||| ||||||||||||||||||||| || | ||||| ||| |||| |||||| | |||||||| ||||||| |
|
|
| T |
2298378 |
tcaaattgtagtttttccttagataacttgcaaaacaagtcactaaagtgtctaaaataacacatgaaatatatcacttttgaacacttatc |
2298287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 17735078 - 17735012
Alignment:
| Q |
179 |
tgatgattggcctgctcttcatggcatattagaata--ctagatctaatcgtatgtcacttctagaa |
243 |
Q |
| |
|
||||||||||| |||||||| ||||||||| |||| |||||||||||| ||| |||||||||||| |
|
|
| T |
17735078 |
tgatgattggctcgctcttcaaggcatattataatatgctagatctaatcctatatcacttctagaa |
17735012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 89; Significance: 9e-43; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 10407602 - 10407722
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
10407602 |
atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
10407701 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
10407702 |
gttacttttgagcacttatca |
10407722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 52045535 - 52045655
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
52045535 |
atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcacaaatttgcctaagttaacacatgaaatat |
52045634 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
52045635 |
gttacttttgagcacttatca |
52045655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 3587909 - 3587788
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
3587909 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
3587810 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
3587809 |
gttacttttgagcacttatcaa |
3587788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 4755510 - 4755631
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
4755510 |
atgtaaggcataaatggtaaaaatacactcaaatggtaacttttccttagataacttgcaaaacaagtcactaatttgcctaatttaacacatgaaatat |
4755609 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
4755610 |
gttacttttgagcacttatcaa |
4755631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 52308640 - 52308765
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatta |
110 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||| |||| |||| | |
|
|
| T |
52308640 |
cagacatgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaagcaagtcactaatttgcctaagttaacacatga |
52308739 |
T |
|
| Q |
111 |
aatatgttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
52308740 |
aatatgttacttttgagcacttatca |
52308765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 27031439 - 27031559
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
27031439 |
atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
27031538 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
27031539 |
gttacttttgagcacttatca |
27031559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 7653876 - 7653995
Alignment:
| Q |
20 |
aaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtta |
119 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||||||| |
|
|
| T |
7653876 |
aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta |
7653975 |
T |
|
| Q |
120 |
cttttgagtacttatcaatc |
139 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
7653976 |
cttttgagcacttatcaatc |
7653995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 8615033 - 8614913
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
8615033 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgc-aaacaagtcactaatttgcctaagttaacacatgaaatat |
8614935 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
8614934 |
gttacttttgagcacttatcaa |
8614913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 36470081 - 36470202
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||| || || |||| ||||| ||||||||||| |
|
|
| T |
36470081 |
atgtaaagcataattggtataaatacactcaaatggtagcttttccttggataacttgcaaaacaaatcactaaattgcctagattaacacattaaatat |
36470180 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
| |||||||||| ||||||||| |
|
|
| T |
36470181 |
ggtacttttgagcacttatcaa |
36470202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 11263597 - 11263694
Alignment:
| Q |
27 |
aaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttactttt |
124 |
Q |
| |
|
|||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||| ||||| ||||| |||| |||| ||||||||||||||| |
|
|
| T |
11263597 |
aaatggtaaaaatacactcaaatgctagcgttaccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttactttt |
11263694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 33247417 - 33247298
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||| | | |||||||||||||| |||||||||| |||||||||| || | |||| ||||| |||| |||||| |
|
|
| T |
33247417 |
atgtaaagcataaatggtaaaagaacaca-atttagtagcttttccttagataacttgcagaacaagtcactaaaatgcctagattaacacataaaatat |
33247319 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
33247318 |
gttacttttgagcacttatca |
33247298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 19472912 - 19473034
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||| |||||||||| |||| |||||| |
|
|
| T |
19472912 |
atgtaaagcataaatggtaaaaatacactcaaaaggtagcttttccttagataacttgcaaaataagtcactaatttgcctaaattaacacatgaaatat |
19473011 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
||||||||| || |||||||||| |
|
|
| T |
19473012 |
gttacttttaagcacttatcaat |
19473034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 7143167 - 7143046
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
7143167 |
atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaattttcctaagttaacacatgaaatat |
7143068 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
7143067 |
gttacttttgagcacttatcaa |
7143046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 12183375 - 12183255
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||| |||| |||| |||||| |
|
|
| T |
12183375 |
atgtgaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaggtcactaatttacataagttaacacatgaaatat |
12183276 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
12183275 |
gttacttttgagcacttatca |
12183255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 22322536 - 22322656
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||| |||| |||| |||||| |
|
|
| T |
22322536 |
atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcgctaatttgcctaagttaacacatgaaatat |
22322635 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
22322636 |
gttacttttgagcacttatca |
22322656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 22817948 - 22817828
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||| |||| || | |||||| |
|
|
| T |
22817948 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactattttgcctaagttaacacctgaaatat |
22817849 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
22817848 |
gttacttttgagcacttatca |
22817828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 31158928 - 31159048
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
31158928 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
31159027 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
31159028 |
gttacttttgagcacttatca |
31159048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 2630926 - 2630808
Alignment:
| Q |
20 |
aaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtta |
119 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||||||| |
|
|
| T |
2630926 |
aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta |
2630827 |
T |
|
| Q |
120 |
cttttgagtacttatcaat |
138 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
2630826 |
cttttgagcacttatcaat |
2630808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 23794603 - 23794482
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||| ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
23794603 |
atgtaaagaataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
23794504 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
23794503 |
gttacttttgagcacttatcaa |
23794482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 10346958 - 10347078
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| ||| || |
|
|
| T |
10346958 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaaaat |
10347057 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
10347058 |
gttacttttgagcacttatca |
10347078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 2798193 - 2798315
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | | ||||||||| |||||||||| |||||||||| || || |||| ||||| |||| |||||| |
|
|
| T |
2798193 |
atgtaaagcataaatggtataaatacactcaaatgattgtttttccttagataacttgcagaacaagtcactaaattgcctagattaacacataaaatat |
2798292 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
2798293 |
gttatttttgaacacttatcaat |
2798315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 45501283 - 45501404
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaac-aagtcaccaatttacctaaattaatacattaaata |
114 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||| || |||||| ||||||| || || |||| |||| |||| ||||| |
|
|
| T |
45501283 |
atgtaaaacataaatggtataaatacactcaaatgatagcttttccttagataaatttcaaaactaagtcactaaattgcctagattagcacatgaaata |
45501382 |
T |
|
| Q |
115 |
tgttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
45501383 |
tgttacttttgagcacttatca |
45501404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 2477190 - 2477070
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||| |||||||||||||||||||||||| | ||||||||| |||| |||| |||||||||||||||| || | |||| |||| ||| |||||| |
|
|
| T |
2477190 |
atgtaaaacataaatggtaaaaatacactcaattagtagctttttcttagataagttgcaaaacaagtcactaaaatgcctaggttaacgcataaaatat |
2477091 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
2477090 |
gttacttttgatcacttatca |
2477070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 31878131 - 31878011
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||| | ||||||| || ||||||| ||||| |||| |||||| |
|
|
| T |
31878131 |
atgtaaagcataaatggtataaatacactcaaatgatagcttttccctagataacttgcaggataagtcactaaattacctatattaacacataaaatat |
31878032 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
||| ||| || |||||||| |
|
|
| T |
31878031 |
attaactttaagcacttatca |
31878011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 24169396 - 24169490
Alignment:
| Q |
44 |
tcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatcaat |
138 |
Q |
| |
|
|||||| ||| |||||||||| ||||||||||||||| |||| || | |||||| |||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
24169396 |
tcaaattgtaacttttccttaagtaacttgcaaaacaaatcactaaagtgcctaaaataatacatgaaatatatcacttttgagcacttatcaat |
24169490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 31001376 - 31001460
Alignment:
| Q |
52 |
tagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||| |||| |||||||| | |||||||||| || | |||| ||||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
31001376 |
tagctttttcttagataacttggagaacaagtcactaaaatgcctagattaacacataaaatatgttacttttgagcacttatca |
31001460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 8139848 - 8139920
Alignment:
| Q |
51 |
gtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttt |
123 |
Q |
| |
|
|||||||||||||| ||||| ||||||| ||||||| || | |||||| ||| |||| |||||| ||||||| |
|
|
| T |
8139848 |
gtagcttttccttagataacctgcaaaataagtcactaaagtgcctaaaataacacatgaaatatattacttt |
8139920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 174154 - 174033
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
174154 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat |
174055 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
174054 |
gttacttttgagcacttatcaa |
174033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 185312 - 185191
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
185312 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttatataacttgcaaaacaagtcattaattttcctaagttaacacatgaaatat |
185213 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
185212 |
gttacttttgagcacttatcaa |
185191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 354392 - 354512
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| |||| |||| |||||| |
|
|
| T |
354392 |
atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgtctaagttaacacatgaaatat |
354491 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
354492 |
gttacttttgagcacttatca |
354512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 117278 - 117405
Alignment:
| Q |
11 |
cagagatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacatta |
110 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||||| || || |||| ||||| |||| | |
|
|
| T |
117278 |
cagacatgtaaagcataaatggtataaacacactcaaatggtagcttttccttagataactttcaaaacaagtcactaaattgcctagattaacacatga |
117377 |
T |
|
| Q |
111 |
aatatgttacttttgagtacttatcaat |
138 |
Q |
| |
|
||||||||||||||||| |||||||||| |
|
|
| T |
117378 |
aatatgttacttttgagcacttatcaat |
117405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1494 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold1494
Description:
Target: scaffold1494; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 1074 - 954
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||| |||| |||| |||||| |
|
|
| T |
1074 |
atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgc-aaacaagtcactaatttgcctaagttaacacatgaaatat |
976 |
T |
|
| Q |
116 |
gttacttttgagtacttatcaa |
137 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
975 |
gttacttttgagcacttatcaa |
954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 79922 - 80012
Alignment:
| Q |
46 |
aaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgttacttttgagtacttatca |
136 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
79922 |
aaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatca |
80012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0458 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0458
Description:
Target: scaffold0458; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 10212 - 10328
Alignment:
| Q |
19 |
taaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgtt |
118 |
Q |
| |
|
|||||||||||||| |||| |||| |||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||| |||| | |||| || |
|
|
| T |
10212 |
taaagcataaatggcaaaattacaa-caaatggtagtttttccttagataacttgcaaaacaagtcactaaaatacctaaattaacacataacatatatt |
10310 |
T |
|
| Q |
119 |
acttttgagtacttatca |
136 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
10311 |
acttttgagcacttatca |
10328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0744 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0744
Description:
Target: scaffold0744; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 1966 - 1847
Alignment:
| Q |
16 |
atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatat |
115 |
Q |
| |
|
|||||||||||||||||||||| |||| | |||||||||||||||| |||||||||| ||||||| || || | |||||||||| |||| |||||| |
|
|
| T |
1966 |
atgtaaagcataaatggtaaaagaacaca-atttggtagcttttccttagataacttgcagaacaagtaactaaaatgcctaaattaacacataaaatat |
1868 |
T |
|
| Q |
116 |
gttacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
1867 |
gttacttttgagcacttatca |
1847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 17127 - 17245
Alignment:
| Q |
18 |
gtaaagcataaatggtaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtcaccaatttacctaaattaatacattaaatatgt |
117 |
Q |
| |
|
||||||||||||||||| ||||||| ||| | || ||||||||||| ||||||||||||||||||||| || |||| |||| |||| |||||||| |
|
|
| T |
17127 |
gtaaagcataaatggtacaaatacaatcacttagtggcttttccttagataacttgcaaaacaagtcactaacaagcctaggttaacacataaaatatgt |
17226 |
T |
|
| Q |
118 |
tacttttgagtacttatca |
136 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
17227 |
tacttttgagcacttatca |
17245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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