View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2176_high_65 (Length: 308)
Name: NF2176_high_65
Description: NF2176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2176_high_65 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 19 - 298
Target Start/End: Complemental strand, 42449869 - 42449590
Alignment:
| Q |
19 |
gtacaatatagccaatggattcaagtgaaacccctcttcnnnnnnnaaatctacagcaattttttatgttattttattcttaaacccctcaaaacttatg |
118 |
Q |
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| T |
42449869 |
gtacaatatacccaatggattcaagtgaaacccctcttctttttttaaatctacagcaattttttatgttattttattcttaaacccctcaaaacgtatg |
42449770 |
T |
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| Q |
119 |
cctttcacaactctatttatttagtttttaaatatgtccaatgacagccagttatgcaagattgtaatgtaattaaaatgaaaatatttggataaaatag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42449769 |
cctttcacaactctatttatttagtttttaaatatgtccaatgacagccagttatgcaagattgtaatgtaattaaaatgaaaatatttggataaaatag |
42449670 |
T |
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| Q |
219 |
catggatgtaacatggttttcgcggtggctacgtcgcgagaaaaatgcgttgcgcgagagctgaattcaactgccctatg |
298 |
Q |
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| T |
42449669 |
cgtggatgtaacatggttttcgcggtggctacatcgcgagaaaaatgcgttgcgcgagagctgaattcaactgccctatg |
42449590 |
T |
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