View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2176_high_80 (Length: 254)
Name: NF2176_high_80
Description: NF2176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2176_high_80 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 20790650 - 20790883
Alignment:
| Q |
15 |
aaaaacatggaaatctacaaccgcaggttgctcctactcaacgaggatgttccaatctcaacatccatatcaccttttcctcaaatccaaccaaacgcat |
114 |
Q |
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| T |
20790650 |
aaaaacatggaaatctacaaccgcaggttgctcctactcaacgaggatgttccaatctcaacatccatatcaccttttcctcaaatccaaccaaacgcat |
20790749 |
T |
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| Q |
115 |
cttcaccgtccatttcaatcacacctccatcaaaaacttttacaccccctctacaattacaattaccatcccatccaatattctcttccaacatagccta |
214 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20790750 |
cttcaccgtccatttcaatcacacccccatcaaaaacttttacaccccctctacaattacaattaccatcccatccaatattctcttccaacatagccta |
20790849 |
T |
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| Q |
215 |
catcttcctcctcctcttctccaccctttgcttc |
248 |
Q |
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||||||||||||||||||||||||||||| |||| |
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| T |
20790850 |
catcttcctcctcctcttctccacccttttcttc |
20790883 |
T |
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