View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2176_low_36 (Length: 420)

Name: NF2176_low_36
Description: NF2176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2176_low_36
NF2176_low_36
[»] chr6 (26 HSPs)
chr6 (16-195)||(34478437-34478616)
chr6 (237-410)||(34478662-34478835)
chr6 (269-410)||(9386217-9386360)
chr6 (87-187)||(20722192-20722291)
chr6 (111-168)||(4339742-4339800)
chr6 (87-195)||(26215394-26215501)
chr6 (86-168)||(9726005-9726087)
chr6 (111-189)||(9385962-9386040)
chr6 (111-168)||(17729159-17729217)
chr6 (111-168)||(21907439-21907497)
chr6 (111-175)||(12183358-12183423)
chr6 (111-167)||(28933695-28933752)
chr6 (127-195)||(9386067-9386135)
chr6 (111-175)||(15466377-15466441)
chr6 (112-167)||(21672470-21672526)
chr6 (121-157)||(24188276-24188312)
chr6 (20-178)||(28586054-28586212)
chr6 (111-168)||(9516792-9516850)
chr6 (111-168)||(23645801-23645859)
chr6 (98-167)||(28589465-28589535)
chr6 (294-339)||(7542831-7542876)
chr6 (56-164)||(8241230-8241338)
chr6 (130-174)||(9838382-9838427)
chr6 (269-308)||(20722070-20722110)
chr6 (112-167)||(21679886-21679942)
chr6 (294-382)||(33655706-33655794)
[»] chr5 (23 HSPs)
chr5 (243-410)||(20533845-20534015)
chr5 (86-187)||(32417371-32417472)
chr5 (47-167)||(24266990-24267109)
chr5 (47-167)||(24343621-24343740)
chr5 (26-137)||(17769461-17769571)
chr5 (122-195)||(23014617-23014690)
chr5 (80-168)||(18208283-18208370)
chr5 (71-167)||(28253248-28253344)
chr5 (115-163)||(19283894-19283943)
chr5 (269-385)||(25922675-25922790)
chr5 (111-167)||(26121359-26121415)
chr5 (240-387)||(32582013-32582159)
chr5 (48-161)||(17431828-17431941)
chr5 (88-168)||(15375916-15375997)
chr5 (87-156)||(15544034-15544103)
chr5 (111-168)||(36175141-36175198)
chr5 (111-167)||(26110497-26110553)
chr5 (111-161)||(19086220-19086271)
chr5 (114-175)||(25550531-25550593)
chr5 (115-195)||(17185474-17185555)
chr5 (116-160)||(24140454-24140499)
chr5 (114-195)||(27921409-27921490)
chr5 (111-168)||(34487645-34487702)
[»] chr2 (22 HSPs)
chr2 (244-410)||(18932359-18932522)
chr2 (114-195)||(25070138-25070219)
chr2 (88-187)||(12557724-12557823)
chr2 (16-178)||(8503094-8503256)
chr2 (48-161)||(31804941-31805054)
chr2 (86-181)||(8447071-8447166)
chr2 (294-385)||(25937112-25937203)
chr2 (269-383)||(29883408-29883520)
chr2 (115-168)||(17349368-17349421)
chr2 (111-168)||(23011797-23011854)
chr2 (111-168)||(29719265-29719323)
chr2 (77-187)||(32440012-32440122)
chr2 (130-195)||(15454734-15454799)
chr2 (111-167)||(17743511-17743568)
chr2 (238-383)||(30695272-30695417)
chr2 (115-195)||(18539985-18540065)
chr2 (111-167)||(25939165-25939221)
chr2 (111-161)||(27909160-27909211)
chr2 (111-168)||(12953328-12953386)
chr2 (87-161)||(25936905-25936979)
chr2 (111-160)||(30900886-30900936)
chr2 (111-159)||(28770486-28770535)
[»] chr1 (26 HSPs)
chr1 (240-410)||(33712803-33712974)
chr1 (88-187)||(26540880-26540979)
chr1 (241-410)||(15052970-15053140)
chr1 (111-168)||(21847641-21847698)
chr1 (111-168)||(15813558-15813617)
chr1 (111-168)||(21449096-21449154)
chr1 (88-161)||(12012841-12012914)
chr1 (115-192)||(13135149-13135227)
chr1 (111-161)||(16359878-16359928)
chr1 (114-167)||(17121515-17121568)
chr1 (130-195)||(24306963-24307028)
chr1 (56-188)||(10064585-10064716)
chr1 (111-178)||(27117742-27117810)
chr1 (90-168)||(24306339-24306417)
chr1 (85-159)||(29242501-29242575)
chr1 (111-160)||(15544008-15544058)
chr1 (111-168)||(17610290-17610348)
chr1 (111-168)||(18736274-18736332)
chr1 (87-168)||(23038046-23038126)
chr1 (111-168)||(25405664-25405722)
chr1 (100-168)||(13345370-13345439)
chr1 (114-161)||(16787767-16787815)
chr1 (259-315)||(17017613-17017667)
chr1 (111-174)||(17837524-17837588)
chr1 (111-158)||(21988026-21988074)
chr1 (111-162)||(33190684-33190736)
[»] chr8 (21 HSPs)
chr8 (238-410)||(17972298-17972471)
chr8 (122-195)||(17972189-17972262)
chr8 (113-167)||(24119804-24119858)
chr8 (243-381)||(26008182-26008319)
chr8 (88-178)||(31288342-31288432)
chr8 (111-168)||(44011058-44011115)
chr8 (88-178)||(14075578-14075669)
chr8 (121-167)||(24644855-24644901)
chr8 (111-168)||(29382395-29382453)
chr8 (111-168)||(24269605-24269662)
chr8 (240-322)||(17649477-17649555)
chr8 (114-168)||(2637608-2637663)
chr8 (113-167)||(17976628-17976683)
chr8 (111-161)||(30783782-30783833)
chr8 (88-181)||(26008007-26008101)
chr8 (121-195)||(28317431-28317505)
chr8 (269-382)||(12268923-12269036)
chr8 (244-308)||(15292882-15292947)
chr8 (244-308)||(15473251-15473316)
chr8 (111-178)||(5850948-5851016)
chr8 (130-174)||(30122183-30122227)
[»] chr3 (21 HSPs)
chr3 (26-182)||(21019616-21019771)
chr3 (80-195)||(21074545-21074660)
chr3 (50-168)||(12805924-12806042)
chr3 (111-168)||(10917925-10917983)
chr3 (111-175)||(21301925-21301990)
chr3 (111-167)||(21825904-21825960)
chr3 (88-187)||(25756659-25756759)
chr3 (109-167)||(821549-821608)
chr3 (111-161)||(22349416-22349467)
chr3 (20-178)||(7147906-7148062)
chr3 (111-168)||(18458458-18458516)
chr3 (269-327)||(24933030-24933088)
chr3 (111-160)||(8143622-8143671)
chr3 (86-195)||(20339771-20339880)
chr3 (111-177)||(12759394-12759461)
chr3 (51-168)||(5508284-5508400)
chr3 (130-168)||(8445849-8445887)
chr3 (111-164)||(19908314-19908368)
chr3 (124-168)||(8889186-8889231)
chr3 (114-187)||(27542930-27543003)
chr3 (111-168)||(31286049-31286106)
[»] chr7 (37 HSPs)
chr7 (88-195)||(26134755-26134862)
chr7 (47-168)||(2563762-2563882)
chr7 (98-189)||(23093304-23093395)
chr7 (113-159)||(2953582-2953628)
chr7 (26-168)||(5108490-5108630)
chr7 (239-410)||(15303409-15303583)
chr7 (111-167)||(18661597-18661654)
chr7 (111-163)||(14196012-14196064)
chr7 (72-147)||(5047442-5047517)
chr7 (87-177)||(10937585-10937676)
chr7 (308-410)||(2453948-2454050)
chr7 (47-124)||(1587625-1587701)
chr7 (114-187)||(4258901-4258974)
chr7 (111-195)||(9866548-9866632)
chr7 (111-161)||(23099993-23100044)
chr7 (243-313)||(4901801-4901871)
chr7 (111-168)||(13759894-13759952)
chr7 (111-168)||(7397203-7397260)
chr7 (111-159)||(17077135-17077184)
chr7 (111-195)||(15303628-15303712)
chr7 (88-159)||(18465989-18466061)
chr7 (111-161)||(8054530-8054581)
chr7 (82-168)||(9916544-9916631)
chr7 (82-168)||(9924456-9924543)
chr7 (26-151)||(20174497-20174619)
chr7 (111-168)||(7318280-7318338)
chr7 (114-156)||(9130916-9130958)
chr7 (47-168)||(9731661-9731781)
chr7 (111-168)||(9864360-9864418)
chr7 (111-168)||(10584520-10584578)
chr7 (111-168)||(10587058-10587116)
chr7 (111-168)||(11221198-11221256)
chr7 (114-167)||(15869605-15869659)
chr7 (88-161)||(2453717-2453790)
chr7 (111-168)||(6005844-6005901)
chr7 (111-167)||(6013600-6013657)
chr7 (260-379)||(9062947-9063067)
[»] scaffold0838 (1 HSPs)
scaffold0838 (111-175)||(2377-2442)
[»] scaffold0832 (1 HSPs)
scaffold0832 (111-175)||(2408-2473)
[»] chr4 (29 HSPs)
chr4 (252-410)||(20317569-20317730)
chr4 (97-189)||(19900573-19900665)
chr4 (111-178)||(22526371-22526439)
chr4 (115-187)||(25643474-25643546)
chr4 (113-168)||(25121260-25121315)
chr4 (111-168)||(11521225-11521283)
chr4 (111-168)||(13908861-13908919)
chr4 (111-168)||(17672009-17672067)
chr4 (111-160)||(19374855-19374904)
chr4 (111-159)||(22176005-22176054)
chr4 (26-168)||(17216741-17216882)
chr4 (111-168)||(11490539-11490597)
chr4 (111-168)||(17709764-17709822)
chr4 (111-189)||(40215331-40215409)
chr4 (60-168)||(13128908-13129016)
chr4 (115-168)||(22218635-22218688)
chr4 (111-168)||(26115938-26115995)
chr4 (88-168)||(10106995-10107075)
chr4 (242-306)||(48640881-48640944)
chr4 (111-161)||(14648902-14648953)
chr4 (80-147)||(15050138-15050205)
chr4 (80-147)||(15104219-15104286)
chr4 (111-168)||(12578300-12578358)
chr4 (111-168)||(13692703-13692761)
chr4 (111-168)||(19492734-19492792)
chr4 (111-168)||(20829773-20829830)
chr4 (111-168)||(9052681-9052738)
chr4 (251-410)||(10107161-10107322)
chr4 (111-167)||(13992911-13992968)
[»] scaffold0085 (2 HSPs)
scaffold0085 (71-187)||(22248-22364)
scaffold0085 (246-410)||(22359-22525)
[»] scaffold0622 (1 HSPs)
scaffold0622 (111-168)||(735-793)
[»] scaffold0008 (1 HSPs)
scaffold0008 (111-168)||(54867-54925)
[»] scaffold0042 (1 HSPs)
scaffold0042 (111-159)||(29914-29962)
[»] scaffold0136 (1 HSPs)
scaffold0136 (294-340)||(15340-15386)
[»] scaffold0023 (1 HSPs)
scaffold0023 (238-312)||(115763-115837)
[»] scaffold0957 (1 HSPs)
scaffold0957 (115-176)||(3164-3225)
[»] scaffold0019 (1 HSPs)
scaffold0019 (88-168)||(11224-11305)
[»] scaffold0102 (1 HSPs)
scaffold0102 (116-167)||(35549-35601)
[»] scaffold0606 (1 HSPs)
scaffold0606 (26-145)||(7799-7917)
[»] scaffold0005 (1 HSPs)
scaffold0005 (111-161)||(168339-168390)
[»] scaffold0598 (1 HSPs)
scaffold0598 (114-156)||(5321-5363)
[»] scaffold0090 (1 HSPs)
scaffold0090 (115-156)||(7458-7500)
[»] scaffold0043 (1 HSPs)
scaffold0043 (114-168)||(89888-89942)
[»] scaffold0001 (1 HSPs)
scaffold0001 (115-168)||(81498-81551)


Alignment Details
Target: chr6 (Bit Score: 168; Significance: 7e-90; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 34478437 - 34478616
Alignment:
Q  16 catatacgattaagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctacca 115  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34478437 catatacgattaagtaatttaaattgcctttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctacca 34478536  T
Q  116 aatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34478537 aatcgtttaccaaataataaagtgtaagtagagtatcgtatccacaaggattgacatttcaactaggcaattcatgttac 34478616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 237 - 410
Target Start/End: Original strand, 34478662 - 34478835
Alignment:
Q  237 gggggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatc 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  34478662 gggggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcaggatgttaatgacggttacgattattcgaatc 34478761  T
Q  337 tccttcattcattttttgttgttaattaatggtcaagcattattcagattttacgtcttctatctaagtgatga 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34478762 tccttcattcattttttgttgttaattaatggtcaagcattattcagattttacgtcttctatctaagtgatga 34478835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 410
Target Start/End: Original strand, 9386217 - 9386360
Alignment:
Q  269 agcaagagtttaggagttaacctc-tttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattttttgttgttaattaatg 367  Q
    ||||||| ||| ||| |||||||  ||||||||||||||||||||| | |||||| |||| |||||||  |||  || ||||| |||   ||||||||||    
T  9386217 agcaagatttttggacttaacctagtttttgattgcagaatgttagcggcggttaggattcttcgaattccctctatccatttgttggaattaattaatg 9386316  T
Q  368 gtcaagcattattcagatttta-cgtcttctatctaagtgatga 410  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||    
T  9386317 gtcaaacattattcagtttttagcgtcttctatctaagtgatga 9386360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 20722291 - 20722192
Alignment:
Q  87 ttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaat 186  Q
    |||||||| |||||| ||||| | |||||||||||||| ||| ||||||||| ||||||||||||  ||||||||||||||| | || ||||||||||||    
T  20722291 ttgatggtcggatttaggcaaatgtaccaaatcgtttaccaagtaataaagt-taagtagagtataatatccacaaggattgtctttccaactaggcaat 20722193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 4339742 - 4339800
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  4339742 taccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattg 4339800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 26215501 - 26215394
Alignment:
Q  87 ttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaat 186  Q
    ||||| || |||||| ||||||  ||||||||| |||  |||||||||||||||||||||||||| ||||||| |  ||||| | |||||| ||||||||    
T  26215501 ttgatagtcggatttaggcaatagtaccaaatcatttc-caaataataaagtgtaagtagagtatcgtatccatatagattgtcgtttcaattaggcaat 26215403  T
Q  187 tcatgttac 195  Q
    ||| |||||    
T  26215402 tcacgttac 26215394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 9726005 - 9726087
Alignment:
Q  86 tttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||||||| ||||| || ||| | |||||||||||||| ||| |||||||||| |||||||||||| ||||||||| ||||||    
T  9726005 tttgatggtcggattagg-caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattg 9726087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 9385962 - 9386040
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattca 189  Q
    |||||||| | ||| ||| |||||||||| |||||||||   ||||||||| |||||| | ||||||||||||||||||    
T  9385962 taccaaattggttaccaagtaataaagtgcaagtagagtcgcgtatccacatggattgtcgtttcaactaggcaattca 9386040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 17729159 - 17729217
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||| |||||||||| |||||    
T  17729159 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattg 17729217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 21907439 - 21907497
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||| ||||| ||||||||||||||||    
T  21907439 taccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattg 21907497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 12183423 - 12183358
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttc 175  Q
    |||||||||||||| ||| |||||||||| |||||| ||||| ||||||||| |||||| ||||||    
T  12183423 taccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttc 12183358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 28933752 - 28933695
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    ||||| || ||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  28933752 taccatattgtttagcaaataataaagtgataagtagagtatcgtatccacaaggatt 28933695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 9386067 - 9386135
Alignment:
Q  127 aaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    ||||||||||||||||||||||||| |||||||||  ||||  |  |||||||||| |||||| |||||    
T  9386067 aaataataaagtgtaagtagagtatcgtatccacatagattatcgattcaactaggaaattcaagttac 9386135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 15466377 - 15466441
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttc 175  Q
    |||||||||||||| ||| |||||||||||| ||||||||| ||||| | | |||||| ||||||    
T  15466377 taccaaatcgtttaccaagtaataaagtgtacgtagagtatcgtatcaatagggattgtcatttc 15466441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 21672526 - 21672470
Alignment:
Q  112 accaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    ||||||||||||| ||| |||||||||| |||||||||||| ||||||||| |||||    
T  21672526 accaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggatt 21672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 24188312 - 24188276
Alignment:
Q  121 tttatcaaataataaagtgtaagtagagtattgtatc 157  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24188312 tttatcaaataagaaagtgtaagtagagtattgtatc 24188276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 28586212 - 28586054
Alignment:
Q  20 tacgattaagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatc 119  Q
    ||||| ||||||||||||||| | |  |||||||| ||||||| ||  || |||||  | |||||| |||||||| |||||| | ||| | |||||||||    
T  28586212 tacgaataagtaatttaaatttctca-gtcgaaaatatcaacactccacgacaacgatgccaaaaacttgatggtcggatttagacaagtataccaaatc 28586114  T
Q  120 gtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaac 178  Q
    ||||| | | ||||||| || ||||||||||||  |||| ||| |||||| | |||||||    
T  28586113 gtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaac 28586054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 9516792 - 9516850
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| | | |||||||||| |||||||||||| ||||||||| ||||||    
T  9516792 taccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattg 9516850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 23645859 - 23645801
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||||| | ||||||    
T  23645859 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattg 23645801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 28589535 - 28589465
Alignment:
Q  98 atttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    |||| ||||| | |||||||||||||||||||||| |||||| |||||| ||||| ||| ||||| |||||    
T  28589535 atttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggatt 28589465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 7542876 - 7542831
Alignment:
Q  294 ttttgattgcagaatgttagtgacggttacgattattcgaatctcc 339  Q
    |||||||||||||||||||| | |||||| |||| |||||||||||    
T  7542876 ttttgattgcagaatgttagcggcggttatgattcttcgaatctcc 7542831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 8241230 - 8241338
Alignment:
Q  56 atcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgt 154  Q
    |||||||||| ||| ||||| ||  ||||| ||||| || ||||| || ||| | ||||||||||||||  || ||| |||||| |||||||||||| ||    
T  8241230 atcaacaatccccgacaacgacgcaaaaaacttgatagtcggattagg-caagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgt 8241328  T
Q  155 atccacaagg 164  Q
    ||||||||||    
T  8241329 atccacaagg 8241338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 9838382 - 9838427
Alignment:
Q  130 taataaagtg-taagtagagtattgtatccacaaggattgacattt 174  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||    
T  9838382 taataaagtgataagtagagtattgtatccacatggattgtcattt 9838427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 20722110 - 20722070
Alignment:
Q  269 agcaagagtttaggagttaacct-ctttttgattgcagaat 308  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  20722110 agcaagagtttaggagttaacctggtttttgattgcagaat 20722070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 21679942 - 21679886
Alignment:
Q  112 accaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    |||||||||||||  || |||||||||| |||||||||||| ||||||||| |||||    
T  21679942 accaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggatt 21679886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 33655794 - 33655706
Alignment:
Q  294 ttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattttttgttgttaattaatggtcaagcattattca 382  Q
    ||||||||||||||||||||||   |||| |||| |||||||| |||  |||||||| |||   ||||||||||||  | |||||||||    
T  33655794 ttttgattgcagaatgttagtggtagttaggattcttcgaatcccctctattcatttgttgaaattaattaatggttgaacattattca 33655706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 243 - 410
Target Start/End: Complemental strand, 20534015 - 20533845
Alignment:
Q  243 tttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttc 342  Q
    ||||||| ||||| | ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||||||| | |||||  ||||||||      
T  20534015 tttgcaatttagtttgtttgcagcagagcaagagtttatgagttaacctatttttgattgcagaatgttagcgacggttatggttattaaaatctcctat 20533916  T
Q  343 attcattttttg---ttgttaattaatggtcaagcattattcagattttacgtcttctatctaagtgatga 410  Q
    ||| |||| |||   |  ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  20533915 attaatttattggattatttaattaatggtcaaacattattcagattttacatcttctgtctaagtgatga 20533845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 32417472 - 32417371
Alignment:
Q  86 tttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaa 185  Q
    ||||||||| | |||| || || | |||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||| || ||||| ||||||||    
T  32417472 tttgatggtcgaatttaggtaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtattatatcgacatggatttacgtttcacctaggcaa 32417373  T
Q  186 tt 187  Q
    ||    
T  32417372 tt 32417371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 24267109 - 24266990
Alignment:
Q  47 gtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtag 146  Q
    |||||||| ||||||||||  || |||| | | |||||| |||||||| | ||| || ||| | |||||||||||||| ||| |||||||||||||||||    
T  24267109 gtcgaaaatatcaacaatcctcggcaacagtgccaaaaacttgatggtcgaattagg-caagtgtaccaaatcgtttaccaagtaataaagtgtaagtag 24267011  T
Q  147 agtattgtatccacaaggatt 167  Q
    ||||| |||||||||||||||    
T  24267010 agtatcgtatccacaaggatt 24266990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 24343740 - 24343621
Alignment:
Q  47 gtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtag 146  Q
    |||||||| ||||||||||  || |||| | | |||||| |||||||| | ||| || ||| | |||||||||||||| ||| |||||||||||||||||    
T  24343740 gtcgaaaatatcaacaatcctcggcaacagtgccaaaaacttgatggtcgaattagg-caagtgtaccaaatcgtttaccaagtaataaagtgtaagtag 24343642  T
Q  147 agtattgtatccacaaggatt 167  Q
    ||||| |||||||||||||||    
T  24343641 agtatcgtatccacaaggatt 24343621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 17769571 - 17769461
Alignment:
Q  26 taagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttat 125  Q
    |||||||||||||||||  | ||  |||| |||||||||||||| |||||||  ||||||||||||||| ||||||  |||| | ||||||||||||||     
T  17769571 taagtaatttaaattgct-tagtgaaaaatatcaacaatctccgacaacggcaccaaaaatttgatggtcggatttatgcaagtgtaccaaatcgtttac 17769473  T
Q  126 caaataataaag 137  Q
    ||| ||||||||    
T  17769472 caagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 23014690 - 23014617
Alignment:
Q  122 ttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||| | |||||||||||||||||| |||||    
T  23014690 ttatcaaataataaagtgataagtagagtattgtatcct-aaggattgtcgtttcaactaggcaattcacgttac 23014617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 18208370 - 18208283
Alignment:
Q  80 caaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||| |||||||| ||||| || ||| | ||||||||||||||  || |||||||||||||||||||||| ||||||||| ||||||    
T  18208370 caaaaacttgatggtcggattagg-caagtgtaccaaatcgtttacaaagtaataaagtgtaagtagagtatcgtatccacatggattg 18208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 28253248 - 28253344
Alignment:
Q  71 caacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    ||||||||  ||||| |||||||| ||||||  |||| | |||||||||||||| ||| |||||||||||||||||| ||| |||| |||| |||||    
T  28253248 caacggcgcaaaaaacttgatggtcggatttatgcaaatgtaccaaatcgtttaccaagtaataaagtgtaagtagaatatcgtattcacagggatt 28253344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 19283943 - 19283894
Alignment:
Q  115 aaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaag 163  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  19283943 aaatcgtttaccaaataataaagtgataagtagagtattgtatccacaag 19283894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 25922790 - 25922675
Alignment:
Q  269 agcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattttttgttgttaattaatgg 368  Q
    ||||||||||||||||| ||| | ||| |||||||| |||||||| | | |||| |||| || ||||||| || |||||||| | |   |||||||||||    
T  25922790 agcaagagtttaggagt-aacatgtttatgattgcaaaatgttagcggctgttaagatttttagaatctcatttattcatttgtcggaattaattaatgg 25922692  T
Q  369 tcaagcattattcagat 385  Q
    |||| ||||||||||||    
T  25922691 tcaaacattattcagat 25922675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 26121415 - 26121359
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    |||||||||||||| ||| ||||||| |||||||||||||| ||||||||| |||||    
T  26121415 taccaaatcgtttagcaagtaataaaatgtaagtagagtatagtatccacagggatt 26121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 387
Target Start/End: Original strand, 32582013 - 32582159
Alignment:
Q  240 ggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctcc 339  Q
    |||||||||| ||| |||||||  | || | ||||||||||| |||||||||  |||||||||||||||||||   |  |||| |||| || ||||||||    
T  32582013 ggttttgcaatttaatctatttataacagaacaagagtttagaagttaacct-attttgattgcagaatgttaacaattgttatgattctttgaatctcc 32582111  T
Q  340 ttcattcattttttgttgttaattaatggtcaagcattattcagattt 387  Q
    |  |||| ||| |||   | ||||||||||||| ||||||||||||||    
T  32582112 tcgattcgtttgttggaatcaattaatggtcaaacattattcagattt 32582159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 17431828 - 17431941
Alignment:
Q  48 tcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagt-gtaagtag 146  Q
    ||||||| |||||||||||||  || ||| | ||||||||||||||| |||| | | ||| | ||| |||||||||| ||| ||||||||| | ||||||    
T  17431828 tcgaaaatatcaacaatctcctgcagcggtgccaaaaatttgatggtcggatat-gacaagtgtactaaatcgtttaccaagtaataaagtggaaagtag 17431926  T
Q  147 agtattgtatccaca 161  Q
    ||||| |||||||||    
T  17431927 agtatcgtatccaca 17431941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 15375997 - 15375916
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||||| |||||  ||||| | |||||||||||||| ||||||||||| || ||||||||||||  |||||||| ||||||    
T  15375997 tgatggtcggattatggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattg 15375916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 15544034 - 15544103
Alignment:
Q  87 ttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtat 156  Q
    |||||||| |||||| ||||| | |||||||||||||| ||| ||||||| ||| |||||||||| ||||    
T  15544034 ttgatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaactgtcagtagagtatcgtat 15544103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 36175141 - 36175198
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||||  ||||||||| ||||||| ||||||||    
T  36175141 taccaaatcgtttaccaagtaataaagtgtttgtagagtatcgtatccataaggattg 36175198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 26110553 - 26110497
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    |||| ||||||||||||| ||||||| ||||||||||||||  |||||||| |||||    
T  26110553 taccgaatcgtttatcaagtaataaaatgtaagtagagtataatatccacagggatt 26110497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 19086271 - 19086220
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| ||| |||||||||| ||||||||||||| ||||||||    
T  19086271 taccaaatcgtttaccaagtaataaagtgataagtagagtattatatccaca 19086220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 25550593 - 25550531
Alignment:
Q  114 caaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttc 175  Q
    ||||||||||| ||| |||||||||| ||||||||||||  |||||||| |||||| ||||||    
T  25550593 caaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttc 25550531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 17185474 - 17185555
Alignment:
Q  115 aaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    ||||| |||| |||||||||||||| |||||||||||| ||||| ||| |||||| | ||||||| |  ||||||| |||||    
T  17185474 aaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttac 17185555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 24140454 - 24140499
Alignment:
Q  116 aatcgtttatcaaataataaagtg-taagtagagtattgtatccac 160  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||    
T  24140454 aatcgtttaccaagtaataaagtgataagtagagtattgtatccac 24140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 27921490 - 27921409
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    ||||| |||| |||| ||||||||||||||||| |||| ||||  ||| || |||   |||||||||||||||||| |||||    
T  27921490 caaattgtttgtcaagtaataaagtgtaagtagtgtatcgtatatacatgggttgttgtttcaactaggcaattcacgttac 27921409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 34487645 - 34487702
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||||| ||||| ||| |||||||||||||||||| |||  |||||||| ||||||    
T  34487645 taccaaattgtttaccaagtaataaagtgtaagtagaatatcatatccacatggattg 34487702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 410
Target Start/End: Original strand, 18932359 - 18932522
Alignment:
Q  244 ttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttca 343  Q
    |||||| ||||||| ||||||||| | ||||||||||||||||||||| ||||| |||||||||||||||||   |||| |    ||||||||||||| |    
T  18932359 ttgcaatttagtctgtttgcagcaaaacaagagtttaggagttaacctgttttttattgcagaatgttagtggtagttagg----ttcgaatctccttta 18932454  T
Q  344 ttcattttttgttgttaattaatggtcaagcattattcagatt-ttacgtcttctatctaagtgatga 410  Q
    ||||||| |||   |||||||||| ||||||||||||||| || ||| ||||||| |||||| |||||    
T  18932455 ttcatttgttggaattaattaatgttcaagcattattcagtttcttatgtcttctctctaagggatga 18932522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 25070138 - 25070219
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||| | || ||||||| ||||||| |||||    
T  25070138 caaatcgtttatcaaataataaagtgtaagtagagtatcgcatccacaaggattgtcgttccaactagacaattcacgttac 25070219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 12557823 - 12557724
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaatt 187  Q
    ||||||| |||||| ||||| | ||||||||| |||| ||| |||||||||||||||||| ||| | |||||||||||||| | |||||| |||||||||    
T  12557823 tgatggtcggatttaggcaagtgtaccaaatcttttaccaagtaataaagtgtaagtagaatatcgaatccacaaggattgccgtttcaattaggcaatt 12557724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 8503256 - 8503094
Alignment:
Q  16 catatacgattaagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctacca 115  Q
    ||||||||| ||||||||| |||||||  | |||| ||| |||||||||| ||  |||||||| | ||||  ||||||| | |||| ||||| | |||||    
T  8503256 catatacgaataagtaattcaaattgct-tagtcggaaatatcaacaatccccagcaacggcgcccaaaacatgatggtcgtatttaggcaagtgtacca 8503158  T
Q  116 aatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaac 178  Q
    ||||||||| ||| |||||| ||| ||||||||| ||  |||||||| |||||| |||||||||    
T  8503157 aatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaac 8503094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 31805054 - 31804941
Alignment:
Q  48 tcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtag 146  Q
    ||||||| |||||||||||||| ||||| || |||||| |||||| |  || || || || | |||||||| ||||| |||||||||||||| |||||||    
T  31805054 tcgaaaatatcaacaatctccggcaacgacgccaaaaacttgatg-tgcgaattaggaaagtgtaccaaattgtttaccaaataataaagtgataagtag 31804956  T
Q  147 agtattgtatccaca 161  Q
    |||||||||||||||    
T  31804955 agtattgtatccaca 31804941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 8447166 - 8447071
Alignment:
Q  86 tttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactag 181  Q
    ||||||||| | |||| ||||| | |||||||||||||| ||| ||||||||| |||||||| ||| ||||||||| |||||| | || |||||||    
T  8447166 tttgatggtcgaatttaggcaagtgtaccaaatcgtttaccaagtaataaagtataagtagattatcgtatccacatggattgtcgttccaactag 8447071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 25937112 - 25937203
Alignment:
Q  294 ttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattttttgttgttaattaatggtcaagcattattcagat 385  Q
    |||||||||||||||||| | | |||||| ||||  ||||||| | || |||||||| |||   ||||||||||||||||||||||||||||    
T  25937112 ttttgattgcagaatgtttgcggcggttaggattcctcgaatcccttttattcatttgttggaattaattaatggtcaagcattattcagat 25937203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 383
Target Start/End: Original strand, 29883408 - 29883520
Alignment:
Q  269 agcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattttttgttgttaattaatgg 368  Q
    ||||||||||||||||| ||||| |||| ||||||| ||||||| || |||||| |||| |||||||||| |  |||||||| |||   |||||||||||    
T  29883408 agcaagagtttaggagt-aacctgtttt-gattgcaaaatgttaatggcggttaggattcttcgaatctcatctattcatttgttggaattaattaatgg 29883505  T
Q  369 tcaagcattattcag 383  Q
    |||| ||||| ||||    
T  29883506 tcaaacattactcag 29883520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 17349368 - 17349421
Alignment:
Q  115 aaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||||| |||||    
T  17349368 aaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaagattg 17349421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 23011854 - 23011797
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||||  |||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  23011854 taccaaattttttaccaagtaataaagtgtaagtagattattgtatccacaaggattg 23011797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 29719323 - 29719265
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||| ||| ||||||||||||||||    
T  29719323 taccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattg 29719265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 32440122 - 32440012
Alignment:
Q  77 cgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttca 176  Q
    ||||||||| |||||||| |||||   |||| | |||||||| ||||| |||  |||||||||||| || ||||| |||||||| ||||||  | |||||    
T  32440122 cgtcaaaaacttgatggtcggattcatgcaagtgtaccaaattgtttaccaagaaataaagtgtaaataaagtatcgtatccacgaggattatcgtttca 32440023  T
Q  177 actaggcaatt 187  Q
    | |||||||||    
T  32440022 attaggcaatt 32440012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 15454734 - 15454799
Alignment:
Q  130 taataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    ||||||||||||||||||||||  ||||||    ||||| |||| |||||||||||||||||||||    
T  15454734 taataaagtgtaagtagagtatcatatccatcgagattgtcattccaactaggcaattcatgttac 15454799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 17743568 - 17743511
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||||||| |||||    
T  17743568 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggatt 17743511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 383
Target Start/End: Complemental strand, 30695417 - 30695272
Alignment:
Q  238 ggggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatct 337  Q
    |||||||||||| ||||| | | | ||||| || ||||||||||||||||||||  |||||| || |||| |||| |   |||||  ||| ||||| |||    
T  30695417 ggggttttgcaatttagtttgtatacagcaaagaaagagtttaggagttaacctggttttgaatggagaaagttaatagaggttaacattcttcgagtct 30695318  T
Q  338 ccttcattcattttttgttgttaattaatggtcaagcattattcag 383  Q
    |||   ||||||| |||   ||| ||||||||||||||||||||||    
T  30695317 cctcttttcatttgttggaattagttaatggtcaagcattattcag 30695272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 18540065 - 18539985
Alignment:
Q  115 aaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    |||| ||||||||| || | |||||||||||||||||  |||  | | |||||||| |||||||||||||||||| |||||    
T  18540065 aaattgtttatcaagtagtgaagtgtaagtagagtatcatatttatagggattgacgtttcaactaggcaattcaagttac 18539985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 25939165 - 25939221
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    ||||| ||| |||||||| |||||||||||||||| ||||| ||||||| |||||||    
T  25939165 taccacatcatttatcaagtaataaagtgtaagtaaagtatcgtatccataaggatt 25939221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 27909211 - 27909160
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| ||| |||||||||| |||||||||||| |||||||||    
T  27909211 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 27909160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 12953386 - 12953328
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||||||| |||||||| |||||||||  ||||||||||||||| |||||| ||||||    
T  12953386 taccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattg 12953328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 25936905 - 25936979
Alignment:
Q  87 ttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccaca 161  Q
    ||||||||||||||| | | | | ||||| ||||||||| || ||||||||||||||||||| ||  ||||||||    
T  25936905 ttgatggttggatttagactagtgtaccacatcgtttattaagtaataaagtgtaagtagagaatcatatccaca 25936979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 30900936 - 30900886
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccac 160  Q
    |||||||| ||||| |||||||||||||| ||| |||||||||||||||||    
T  30900936 taccaaattgtttaccaaataataaagtgataactagagtattgtatccac 30900886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 28770535 - 28770486
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatcca 159  Q
    ||||||||| |||| |||||||||||||| |||||||||||| |||||||    
T  28770535 taccaaatcctttaccaaataataaagtgataagtagagtatcgtatcca 28770486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 410
Target Start/End: Original strand, 33712803 - 33712974
Alignment:
Q  240 ggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctcc 339  Q
    |||||||||| ||| | | ||| || ||||||||||||||||||||||||||  |||||||||||||||||||| || ||||| | || || ||||| ||    
T  33712803 ggttttgcaatttaatatgtttccaacatagcaagagtttaggagttaacctggttttgattgcagaatgttagcgatggttagggttctttgaatcccc 33712902  T
Q  340 ttcattcattttttgttgttaattaatggtcaagcattattcagatttta-cgtcttctatctaagtgatga 410  Q
    |  |||||| | |||    ||||||||||||||| ||||||||| ||||| |||||| ||||||||||||||    
T  33712903 tctattcatctattggaaataattaatggtcaagtattattcagtttttagcgtcttttatctaagtgatga 33712974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 26540880 - 26540979
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaatt 187  Q
    ||||||| |||||| ||||| | |||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||  |||| ||||||| |||||    
T  26540880 tgatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattatcattccaactagacaatt 26540979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 15052970 - 15053140
Alignment:
Q  241 gttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctcct 340  Q
    |||| |||| ||||| | ||||||||| || |||||||||||||||||| |  ||||||||| |||||||||  | | |||| |||| ||  |||||| |    
T  15052970 gtttggcaatttagtatgtttgcagcagaggaagagtttaggagttaacttggttttgattgtagaatgttatcggcagttaagattctttaaatctcat 15053069  T
Q  341 tcattcattttttgttgttaattaatggtcaagcattattcagatttta-cgtcttctatctaagtgatga 410  Q
      |||||||| |||   ||||||||||||||||||||||| || ||||| |  | ||||||||||||||||    
T  15053070 ctattcatttgttgaaattaattaatggtcaagcattatttagtttttagctccatctatctaagtgatga 15053140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 21847641 - 21847698
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||    
T  21847641 taccaaatcgtttaccaagtaataaagtctaagtagagtattgtatccacatggattg 21847698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 15813617 - 15813558
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgt--aagtagagtattgtatccacaaggattg 168  Q
    ||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||||    
T  15813617 taccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattg 15813558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 21449096 - 21449154
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||    
T  21449096 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattg 21449154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 12012914 - 12012841
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    ||||||||||||| || ||| | || ||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  12012914 tgatggttggattagg-caagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccaca 12012841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 13135227 - 13135149
Alignment:
Q  115 aaatcgtttatcaaataataaagtgtaagta-gagtattgtatccacaaggattgacatttcaactaggcaattcatgt 192  Q
    |||||||||||||| |||||  | ||||||| |||||  |||| ||||||||||| | |||||||||||||||||||||    
T  13135227 aaatcgtttatcaagtaatacggggtaagtaagagtaccgtattcacaaggattgtcgtttcaactaggcaattcatgt 13135149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 16359878 - 16359928
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccaca 161  Q
    |||||||||||||| ||| ||||||| |||||||| |||||||||||||||    
T  16359878 taccaaatcgtttaccaagtaataaaatgtaagtatagtattgtatccaca 16359928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 17121568 - 17121515
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    ||||| ||||||||| ||||||||||||||||||||||  |||||| |||||||    
T  17121568 caaattgtttatcaagtaataaagtgtaagtagagtatcatatccataaggatt 17121515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 24307028 - 24306963
Alignment:
Q  130 taataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    |||||||||||||||||||||| |||| || | |||||| | ||||||||| |||||||| |||||    
T  24307028 taataaagtgtaagtagagtatcgtattcatagggattgtcgtttcaactaagcaattcacgttac 24306963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 10064716 - 10064585
Alignment:
Q  56 atcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgta 155  Q
    ||||| |||| ||| |||||| ||||||||||||||||| | ||||   ||| | |||||||||||||| ||| ||||||| || | ||||| |||  ||    
T  10064716 atcaaaaatccccgacaacggtgtcaaaaatttgatggtcg-atttaaacaagtgtaccaaatcgtttaccaagtaataaaatgcaggtagaatatcata 10064618  T
Q  156 tccacaaggattgacatttcaactaggcaattc 188  Q
    ||||||||||||  | ||  |||||||||||||    
T  10064617 tccacaaggattttcgttcaaactaggcaattc 10064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 27117810 - 27117742
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaac 178  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||| |||| | |||| | |||||||    
T  27117810 taccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaac 27117742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 24306417 - 24306339
Alignment:
Q  90 atggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||| |||||||| ||| | |||||| ||||||| ||| |||||||||| |||||||||||| ||||||||| ||||||    
T  24306417 atggtcggatttgg-caagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg 24306339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 29242501 - 29242575
Alignment:
Q  85 atttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatcca 159  Q
    |||||||||| |||| ||| ||| | |||||||| ||||||||| |||||||||| |||||||||||| |||||||    
T  29242501 atttgatggtcggatatgg-caagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatcca 29242575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 15544058 - 15544008
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccac 160  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||||||    
T  15544058 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccac 15544008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 17610348 - 17610290
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||  |||||||||||| ||||||||| ||||||    
T  17610348 taccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattg 17610290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 18736332 - 18736274
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| ||||||| |||| ||||||||| ||||||    
T  18736332 taccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattg 18736274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 23038126 - 23038046
Alignment:
Q  87 ttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| || ||| | |||||||||||||| ||| |||||||||| ||||| |||||| ||||||||| ||||||    
T  23038126 ttgatggttggattagg-caagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattg 23038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 25405722 - 25405664
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||| ||||||| ||| |||||||||| |||||| ||||| ||||||||||||||||    
T  25405722 taccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattg 25405664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 13345439 - 13345370
Alignment:
Q  100 ttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||| | |||||||| ||||| ||| |||||||||| ||||||||||||  |||||||| ||||||    
T  13345439 ttgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattg 13345370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 16787815 - 16787767
Alignment:
Q  114 caaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    ||||||||||||||| |||||||||| |||||||||||| |||| ||||    
T  16787815 caaatcgtttatcaagtaataaagtgataagtagagtatcgtattcaca 16787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 17017667 - 17017613
Alignment:
Q  259 tttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtg 315  Q
    ||||||||| |||||||| || ||||||||||| |||| ||||||||||||||||||    
T  17017667 tttgcagcaaagcaagagatt-ggagttaacctgtttt-gattgcagaatgttagtg 17017613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 17837524 - 17837588
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacattt 174  Q
    |||||||| ||||| ||| |||||||||  ||||||||||||  ||||||||||||||| |||||    
T  17837524 taccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattt 17837588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 21988074 - 21988026
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatcc 158  Q
    ||||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  21988074 taccaaatcctttaccaaataataaagtgataagtagagtatcgtatcc 21988026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 33190684 - 33190736
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaa 162  Q
    |||||||||||||||||| ||||||| || ||||||||||||  |||||||||    
T  33190684 taccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaa 33190736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 410
Target Start/End: Original strand, 17972298 - 17972471
Alignment:
Q  238 ggggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatct 337  Q
    |||||||||||| |||||||||||| | || |||||||||||| || ||||||| ||||| |||||| | | |||| | |||| | |||| ||||||||     
T  17972298 ggggttttgcaatttagtctatttgtaccagagcaagagtttatgaattaacctgttttttattgcaaagttttagcggcggtaaggattcttcgaatcc 17972397  T
Q  338 ccttcattcattttttgttgttaattaatggtcaagcattattcagatt-ttacgtcttctatctaagtgatga 410  Q
    |||| |||||||| |||    |||||||||||||| |||||||||| || |||| |||| ||||||||||||||    
T  17972398 cctttattcatttgttggaactaattaatggtcaaacattattcagtttcttacttcttatatctaagtgatga 17972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 17972189 - 17972262
Alignment:
Q  122 ttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    ||||||| |||||||||||||||||||||| |||||| || |||||| ||||  |||||||||||||| |||||    
T  17972189 ttatcaagtaataaagtgtaagtagagtatcgtatccgcatggattgtcattctaactaggcaattcacgttac 17972262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 24119858 - 24119804
Alignment:
Q  113 ccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||| |||||    
T  24119858 ccaaatcgtttaccaagttataaagtgtaagtagagtattgtatccacatggatt 24119804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 381
Target Start/End: Original strand, 26008182 - 26008319
Alignment:
Q  243 tttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttc 342  Q
    ||||||| ||||| | |||||||  ||||||||||||| ||||| |||| |||| ||||| ||||||||||  | ||||| |||| || ||||| |||      
T  26008182 tttgcaatttagtttgtttgcagtgtagcaagagtttaagagtttacctgtttt-gattgtagaatgttagcaatggttaagattttttgaatcccctct 26008280  T
Q  343 attcattttttgttgttaattaatggtcaagcattattc 381  Q
    |||||||| |||   ||||||||||||||| ||||||||    
T  26008281 attcatttgttgaaattaattaatggtcaaacattattc 26008319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 31288342 - 31288432
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaac 178  Q
    ||||||| |||||| || || | |||||||||||||| ||| |||||||||||||||| ||||| ||||||| | |||||| | |||||||    
T  31288342 tgatggtcggatttaggaaagtgtaccaaatcgtttaccaagtaataaagtgtaagtaaagtatcgtatccatagggattgtcttttcaac 31288432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 44011115 - 44011058
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||||||||||  || |||||||||||||||||||||| ||||||||| ||||||    
T  44011115 taccaaatcgtttacgaagtaataaagtgtaagtagagtatcgtatccacatggattg 44011058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 14075578 - 14075669
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaac 178  Q
    |||||||||||||| || |||| ||||||||| |||| ||| ||| |||||| |||||||| ||| ||||||||| |||||| | |||||||    
T  14075578 tgatggttggatttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaac 14075669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 24644855 - 24644901
Alignment:
Q  121 tttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||    
T  24644855 tttaccaagtaataaagtgtaagtagagtattgtatccacatggatt 24644901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 29382453 - 29382395
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||||||| ||||||    
T  29382453 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg 29382395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 24269605 - 24269662
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||||  |||| ||| |||||||||||||||||||||| ||||||||| ||||||    
T  24269605 taccaaattatttaccaagtaataaagtgtaagtagagtatcgtatccacagggattg 24269662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 17649477 - 17649555
Alignment:
Q  240 ggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggtta 322  Q
    |||| ||||| |||||||||||||||   ||||||||||||||  |||||||  ||||||||||| |||||||||| ||||||    
T  17649477 ggttctgcaatttagtctatttgcag---agcaagagtttagggattaacctgattttgattgca-aatgttagtggcggtta 17649555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 2637608 - 2637663
Alignment:
Q  114 caaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||| ||||||||| |||||||||| |||||||||||| ||||||||| ||||||    
T  2637608 caaattgtttatcaagtaataaagtgataagtagagtatcgtatccacatggattg 2637663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 17976628 - 17976683
Alignment:
Q  113 ccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    ||||||| |||||||| |||||||||| |||||||||||| |||||||||| ||||    
T  17976628 ccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagatt 17976683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 30783833 - 30783782
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| ||| |||||||||| |||||||||||| |||||||||    
T  30783833 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 30783782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 26008007 - 26008101
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaactag 181  Q
    ||||||| | |||| ||||| | ||||||||| |||| ||| |||||||||| |||||||||||| ||||| | | |||||| |||| |||||||    
T  26008007 tgatggtcgaatttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtcattccaactag 26008101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 28317431 - 28317505
Alignment:
Q  121 tttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    |||| ||| ||||||||||||||||||||||  |||| ||| | ||||   |||||||||||||||||| |||||    
T  28317431 tttaccaagtaataaagtgtaagtagagtatcatatcaacatgtattgttgtttcaactaggcaattcacgttac 28317505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 12268923 - 12269036
Alignment:
Q  269 agcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattttttgttgttaattaatgg 368  Q
    |||||| ||||||||||||||||  ||||||||| |||||||||| | | |||| |||| ||| |||| |||  ||| |||| ||    ||| |||||||    
T  12268923 agcaagggtttaggagttaacctgcttttgattgtagaatgttagcggcagttaggattcttcaaatcccctctatttatttgttagaattagttaatgg 12269022  T
Q  369 tcaagcattattca 382  Q
    |||| |||||||||    
T  12269023 tcaaacattattca 12269036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 15292882 - 15292947
Alignment:
Q  244 ttgcaaattagtctatttgcagcatagcaagagtttaggagttaacct-ctttttgattgcagaat 308  Q
    |||||| ||||||| ||||| ||| |||||| ||||||||||||||||  ||||| ||||||||||    
T  15292882 ttgcaatttagtctgtttgcggcaaagcaagggtttaggagttaacctgatttttaattgcagaat 15292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 15473251 - 15473316
Alignment:
Q  244 ttgcaaattagtctatttgcagcatagcaagagtttaggagttaacct-ctttttgattgcagaat 308  Q
    |||||| ||||||| ||||| ||| |||||| ||||||||||||||||  ||||| ||||||||||    
T  15473251 ttgcaatttagtctgtttgcggcaaagcaagggtttaggagttaacctgatttttaattgcagaat 15473316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 5850948 - 5851016
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaac 178  Q
    |||| ||||||||| ||| |||||||||| |||||||||||| |||||||||  ||||| | |||||||    
T  5850948 tacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaac 5851016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 30122227 - 30122183
Alignment:
Q  130 taataaagtgtaagtagagtattgtatccacaaggattgacattt 174  Q
    ||||||||||||||||||||||  |||||||| |||||| |||||    
T  30122227 taataaagtgtaagtagagtatcatatccacatggattgtcattt 30122183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 21019771 - 21019616
Alignment:
Q  26 taagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttat 125  Q
    ||||||||||||||||   | |||||||| ||||||| ||| || |||||| |||||||| |||||| |||||||| |||||   ||||||||| | ||     
T  21019771 taagtaatttaaattgtt-tagtcgaaaatatcaacattcttcggcaacggtgtcaaaaaattgatgattggatttaggcaacagtaccaaatcatctac 21019673  T
Q  126 caaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactagg 182  Q
    ||| ||||||||| ||||||||||||  ||||||||||||||| | || ||||||||    
T  21019672 caagtaataaagtataagtagagtatcttatccacaaggattgtcgttccaactagg 21019616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 21074660 - 21074545
Alignment:
Q  80 caaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaact 179  Q
    |||||| |||||| ||||||||  |||| | ||||||||| | |||||| |||||||||||||||||||||| |||||||| || |||| | || |||||    
T  21074660 caaaaacttgatgattggatttatgcaactgtaccaaatcatctatcaagtaataaagtgtaagtagagtatcgtatccaccagaattgtcgttccaact 21074561  T
Q  180 aggcaattcatgttac 195  Q
    | | |||||| |||||    
T  21074560 atgtaattcacgttac 21074545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 12806042 - 12805924
Alignment:
Q  50 gaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagag 148  Q
    ||||| || ||||||||||| |||||||  |||||| |||||||| ||| || ||||| | ||||||||| |||| ||| |||||||||| |||||||||    
T  12806042 gaaaatattaacaatctccgacaacggccccaaaaacttgatggtcgga-ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagag 12805944  T
Q  149 tattgtatccacaaggattg 168  Q
    |||  |||||||| ||||||    
T  12805943 tatcatatccacatggattg 12805924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 10917925 - 10917983
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||||    
T  10917925 taccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattg 10917983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 21301925 - 21301990
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttc 175  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||||||| |||||| ||||||    
T  21301925 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttc 21301990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 21825960 - 21825904
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggatt 167  Q
    |||||||||||||| | | |||||||||||||||||||||| ||||||||| |||||    
T  21825960 taccaaatcgtttaccgagtaataaagtgtaagtagagtatcgtatccacatggatt 21825904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 25756659 - 25756759
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaag-tgtaagtagagtattgtatccacaaggattgacatttcaactaggcaat 186  Q
    ||||||| |||||| ||||| | ||| ||||| |||||||||||||||||  ||||||||||||| ||||||||||  |||| | ||  |||||||||||    
T  25756659 tgatggtcggatttaggcaagtgtacaaaatcatttatcaaataataaagaagtaagtagagtatcgtatccacaaaaattgtcgttctaactaggcaat 25756758  T
Q  187 t 187  Q
    |    
T  25756759 t 25756759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 821608 - 821549
Alignment:
Q  109 tctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    |||||||||||||||| ||| |||||||||| |||||||||||| ||||||||| |||||    
T  821608 tctaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggatt 821549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 22349416 - 22349467
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  22349416 taccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 22349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 7147906 - 7148062
Alignment:
Q  20 tacgattaagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatc 119  Q
    ||||| |||||||||||||||||  |  ||||||| || ||||||| |   |||||||| |||||| |||||||| ||||| || ||| | |||||||||    
T  7147906 tacgaataagtaatttaaattgct-taatcgaaaatataaacaatccctaacaacggcgccaaaaacttgatggtcggattagg-caaatgtaccaaatc 7148003  T
Q  120 gtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaac 178  Q
    ||||| ||| || ||||   |||||||||||| || |||||| |||||| | |||||||    
T  7148004 gtttaccaagtactaaaaaataagtagagtatcgtctccacatggattgtcgtttcaac 7148062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 18458516 - 18458458
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||| ||||||||| |||||||||| |||||||||||| |||||||||| |||||    
T  18458516 taccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacaaagattg 18458458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 24933088 - 24933030
Alignment:
Q  269 agcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgatt 327  Q
    ||||| |||||||||||||||||  |||||||||||||||||||| | |||||| ||||    
T  24933088 agcaatagtttaggagttaacctggttttgattgcagaatgttagcggcggttaggatt 24933030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 8143622 - 8143671
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccac 160  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||||||||    
T  8143622 taccaaatcgtttactaagcaataaagtgtaagtagagtattgtatccac 8143671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 20339880 - 20339771
Alignment:
Q  86 tttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaa 185  Q
    ||||||| |||||||| || || | || ||||||||||| ||| ||||||| |||||||||||||| |||| |||| |  |||   ||||||| ||||||    
T  20339880 tttgatgattggatttagggaagtatatcaaatcgtttaccaagtaataaaatgtaagtagagtatcgtattcacatgtgttgttgtttcaaccaggcaa 20339781  T
Q  186 ttcatgttac 195  Q
    || |||||||    
T  20339780 ttgatgttac 20339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 12759394 - 12759461
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaa 177  Q
    |||||||| ||||| ||| |||||||||| |||||||||||| ||||||||||| |||| | ||||||    
T  12759394 taccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttcaa 12759461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 5508284 - 5508400
Alignment:
Q  51 aaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagt 149  Q
    |||| |||||||||||| | |||||||| |||||||||||||| | || || ||||| | ||||||||| |||  ||| |||||||||| ||||| ||||    
T  5508284 aaaatatcaacaatctctggcaacggcgccaaaaatttgatgg-tcgaattaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt-gagt 5508381  T
Q  150 attgtatccacaaggattg 168  Q
    ||  |||||||| ||||||    
T  5508382 ataatatccacatggattg 5508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 8445849 - 8445887
Alignment:
Q  130 taataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  8445849 taataaagtgtaagtagagtattgtgtccacatggattg 8445887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 19908314 - 19908368
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaagg 164  Q
    |||||||||||||| ||||||||||| || |||||| ||||| ||||||||||||    
T  19908314 taccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagg 19908368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 8889231 - 8889186
Alignment:
Q  124 atcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||    
T  8889231 atcaagtaataaagtgataagtagagtattgtatccacagggattg 8889186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 27543003 - 27542930
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaatt 187  Q
    ||||||||||| |||  |||||||| |||||||||||| ||||||||| | ||||   || |||||||||||||    
T  27543003 caaatcgtttaccaagaaataaagtataagtagagtatcgtatccacatgaattgttgttccaactaggcaatt 27542930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 31286106 - 31286049
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||||| |||| ||| ||||||||||||| |||| ||| ||||||||| ||||||    
T  31286106 taccaaatcatttaccaagtaataaagtgtaactagaatatcgtatccacagggattg 31286049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 26134862 - 26134755
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaatt 187  Q
    |||||||||||||| | ||| | |||||||||||||| ||| ||||||| |||||||||||||| |||||||||  || || |||||||||||| |||||    
T  26134862 tgatggttggatttagacaagtgtaccaaatcgtttaccaagtaataaaatgtaagtagagtatcgtatccacatagactgtcatttcaactagacaatt 26134763  T
Q  188 catgttac 195  Q
    || |||||    
T  26134762 cacgttac 26134755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 168
Target Start/End: Original strand, 2563762 - 2563882
Alignment:
Q  47 gtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtag 146  Q
    |||||||| ||||| |||| ||| |||||||| |||||| ||||||   |||||  | ||| | |||||||||||||| ||| |||||||||||||||||    
T  2563762 gtcgaaaatatcaataatccccgacaacggcgccaaaaacttgatgtgcggattatg-caagtgtaccaaatcgtttaccaagtaataaagtgtaagtag 2563860  T
Q  147 agtattgtatccacaaggattg 168  Q
    ||||| ||||||||||||||||    
T  2563861 agtatcgtatccacaaggattg 2563882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 23093304 - 23093395
Alignment:
Q  98 atttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattca 189  Q
    |||| ||||| | ||||||||||||||  || |||||||||||||||||||||||||||| ||  |||||| | ||||||||||||||||||    
T  23093304 atttaggcaagtgtaccaaatcgtttactaagtaataaagtgtaagtagagtattgtatctacgtggattgtcgtttcaactaggcaattca 23093395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 2953582 - 2953628
Alignment:
Q  113 ccaaatcgtttatcaaataataaagtgtaagtagagtattgtatcca 159  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  2953582 ccaaatcgtttatcaaataataaagtgtaagtagagtatcgtatcca 2953628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 5108490 - 5108630
Alignment:
Q  26 taagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttat 125  Q
    |||||||||| ||||||  | ||||||||  | ||||||||||| |||||| |  |||||  |||||  ||||||||| ||| | ||||||||  ||||     
T  5108490 taagtaattttaattgct-tagtcgaaaatgttaacaatctccggcaacggtgcgaaaaacctgatgtgtggatttgg-caagtgtaccaaattatttac 5108587  T
Q  126 caaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||| |||||||||||||||||||||| ||||||||||||||||    
T  5108588 caagtaataaagtgtaagtagagtatcgtatccacaaggattg 5108630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 410
Target Start/End: Complemental strand, 15303583 - 15303409
Alignment:
Q  239 gggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctc 338  Q
    ||||||||||| ||||| | ||||| | | |||||| ||||| | |||||||| |||| |||||||||||||||||| |||||| |||| ||||| ||      
T  15303583 gggttttgcaatttagtttgtttgctgtagagcaagtgtttatgtgttaacctgtttt-gattgcagaatgttagtggcggttatgattcttcgattcca 15303485  T
Q  339 cttcattcattttttgttgttaattaatggtcaagcattattca----gattttacgtcttctatctaagtgatga 410  Q
    ||||| ||||||   |    ||||||||| ||||||||||||||    |||||||| |||| ||||||||||||||    
T  15303484 cttcactcatttgcgggaagtaattaatgatcaagcattattcagattgattttacatcttatatctaagtgatga 15303409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 18661597 - 18661654
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  18661597 taccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccacaaggatt 18661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 14196064 - 14196012
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaag 163  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  14196064 taccaaatcgtttatcaaataataaagtgtaagtaaagtaccgtatccacaag 14196012  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 5047517 - 5047442
Alignment:
Q  72 aacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtaga 147  Q
    ||||||| |||||| |||||||| |||||| ||||| | ||||||||| |||| ||| ||||||||||||||||||    
T  5047517 aacggcgccaaaaacttgatggtcggatttaggcaagtgtaccaaatcatttaccaagtaataaagtgtaagtaga 5047442  T

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Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 10937585 - 10937676
Alignment:
Q  87 ttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaa 177  Q
    ||||||||||||||| ||||| | || ||||||||||| ||| |||||||||| |||||| ||||| ||||||||| |||||| | ||||||    
T  10937585 ttgatggttggatttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaa 10937676  T

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Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 410
Target Start/End: Original strand, 2453948 - 2454050
Alignment:
Q  308 tgttagtgacggttacgattattcgaatctccttcattcattttttgttgttaattaatggtcaagcattattcagattttacgtcttctatctaagtga 407  Q
    |||||| | |||||| ||||||||||| | |||| |||||||| |||   ||||| | |||||||||||||||||| | ||| ||||| |||||||||||    
T  2453948 tgttagcggcggttaggattattcgaaccccctttattcatttgttggatttaatgattggtcaagcattattcagttcttatgtcttttatctaagtga 2454047  T
Q  408 tga 410  Q
    |||    
T  2454048 tga 2454050  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 1587625 - 1587701
Alignment:
Q  47 gtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgttta 124  Q
    ||||||||||||||||||||||| |||||||  |||||| |||||||| ||| || ||||| | ||||||||||||||    
T  1587625 gtcgaaaacatcaacaatctccggcaacggcaccaaaaacttgatggtcgga-ttaggcaaatgtaccaaatcgttta 1587701  T

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Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 4258974 - 4258901
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaatt 187  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||   ||||||||||||||||    
T  4258974 caaatcgtttaccaaataataaaatgtaactagagtatcgtatccataatgattgttgtttcaactaggcaatt 4258901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 9866632 - 9866548
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    |||||||| ||||| ||||||||||||||||||||||||||  |||||||||  |||| | ||  |||||| ||||||| |||||    
T  9866632 taccaaattgtttaccaaataataaagtgtaagtagagtatcatatccacaataattgtcgttctaactagacaattcacgttac 9866548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 23100044 - 23099993
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  23100044 taccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 23099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 4901871 - 4901801
Alignment:
Q  243 tttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttag 313  Q
    ||||||| |||||||  |||| ||| || ||||||||||| ||||||||  ||||||||||||||||||||    
T  4901871 tttgcaatttagtctgcttgcggcaaagtaagagtttaggggttaacctgattttgattgcagaatgttag 4901801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 13759952 - 13759894
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| ||||||||||||  |||||||||||||||    
T  13759952 taccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattg 13759894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 7397203 - 7397260
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||| |||||| ||| ||||||||||||| |||||||| ||||||||| ||||||    
T  7397203 taccaaaccgtttaccaagtaataaagtgtaactagagtatcgtatccacatggattg 7397260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 17077135 - 17077184
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatcca 159  Q
    |||||||| |||||||||||||||||||| || |||||||||||||||||    
T  17077135 taccaaattgtttatcaaataataaagtgataggtagagtattgtatcca 17077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 15303712 - 15303628
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattcatgttac 195  Q
    |||||||||||||| ||  |||||||||||||||| ||||| ||||| ||| | |||| | || |||||||| |||||| |||||    
T  15303712 taccaaatcgtttaccaggtaataaagtgtaagtaaagtatcgtatctacacgaattgtcgttccaactaggaaattcacgttac 15303628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 18465989 - 18466061
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatcca 159  Q
    |||||||| ||||| |||||   ||||||||| ||||||||||||||||||| |||||||||||  |||||||    
T  18465989 tgatggttagatttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatcca 18466061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 8054581 - 8054530
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||| ||||    
T  8054581 taccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcaca 8054530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 9916544 - 9916631
Alignment:
Q  82 aaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||| |||||||| |||||| ||||| | ||||||||| |||| ||  |||||||||  |||||||||||| ||||||||| ||||||    
T  9916544 aaaacttgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattg 9916631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 9924456 - 9924543
Alignment:
Q  82 aaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||| |||||||| |||||| ||||| | ||||||||| |||| ||  |||||||||  |||||||||||| ||||||||| ||||||    
T  9924456 aaaacttgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattg 9924543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 20174497 - 20174619
Alignment:
Q  26 taagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttat 125  Q
    |||||||||||||||   ||| || |||| |||||||||| ||| ||| || | |||||| |||| | |||||||| | ||| | ||||||||||||||     
T  20174497 taagtaatttaaatt---cttctcaaaaatatcaacaatccccgacaatggagccaaaaacttgacgtttggatttagacaagtataccaaatcgtttac 20174593  T
Q  126 caaataataaagtgtaagtagagtat 151  Q
     |  ||||||||||||| ||||||||    
T  20174594 taggtaataaagtgtaactagagtat 20174619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 7318280 - 7318338
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||| |||||||| ||| |||||||||| |||||||||||| ||||||||| ||||||    
T  7318280 taccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattg 7318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 9130916 - 9130958
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtat 156  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  9130916 caaattgtttatcaagtaataaagtgtaagtatagtattgtat 9130958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 168
Target Start/End: Complemental strand, 9731781 - 9731661
Alignment:
Q  47 gtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagta 145  Q
    |||||||| |||||||||| ||| |||| ||| |||||| ||||||   ||||| || ||| | ||||||||||||||  || || ||||||| ||||||    
T  9731781 gtcgaaaatatcaacaatc-ccgacaacagcgccaaaaacttgatgtgcggattagg-caagtgtaccaaatcgtttaaaaagtagtaaagtgataagta 9731684  T
Q  146 gagtattgtatccacaaggattg 168  Q
    |||||| ||| ||||||||||||    
T  9731683 gagtatcgtaaccacaaggattg 9731661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 9864418 - 9864360
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||| ||||| ||| |||||||||| ||||||||||||  |||||||||||||||    
T  9864418 taccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattg 9864360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 10584578 - 10584520
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||||||| |||||||||| |||| | ||||| ||||||||| ||||||    
T  10584578 taccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattg 10584520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 10587116 - 10587058
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||| ||| ||||||    
T  10587116 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattg 10587058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 11221256 - 11221198
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||||||||||||  || ||||||| || |||||||||||||||||||||| ||||||    
T  11221256 taccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattg 11221198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 15869605 - 15869659
Alignment:
Q  114 caaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    ||||||||||| ||| |||||||||| |||||||||||| |||||| ||||||||    
T  15869605 caaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatt 15869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 2453717 - 2453790
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccaca 161  Q
    |||||||||||||| ||||| | ||  |||| ||||||||| ||||||| | |||||||||||| |||| ||||    
T  2453717 tgatggttggatttaggcaagtgtattaaattgtttatcaagtaataaaatttaagtagagtatcgtattcaca 2453790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 6005844 - 6005901
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||||| ||||| ||| ||||||| |||||  ||||||||||||||||| ||||||    
T  6005844 taccaaattgtttaccaattaataaattgtaaccagagtattgtatccacatggattg 6005901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 6013600 - 6013657
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    ||||||||| |||||||| || | ||||| |||||||||||| |||||||||||||||    
T  6013600 taccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggatt 6013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 379
Target Start/End: Original strand, 9062947 - 9063067
Alignment:
Q  260 ttgcagcatagcaagagtttaggagttaacctc-tttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattttttgttgt 358  Q
    |||||||| ||||||||||||  ||||||| |  ||||||||||||||||||||| | ||||||  ||| || |||||  ||  |||||||| |||   |    
T  9062947 ttgcagcagagcaagagtttatcagttaacttggtttttgattgcagaatgttagcggcggttagaattcttagaatcctctctattcatttgttggact 9063046  T
Q  359 taattaatggtcaagcattat 379  Q
    |||||| ||||||| ||||||    
T  9063047 taattattggtcaaacattat 9063067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 2377 - 2442
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttc 175  Q
    |||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  2377 taccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttc 2442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 2408 - 2473
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttc 175  Q
    |||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  2408 taccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttc 2473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 410
Target Start/End: Complemental strand, 20317730 - 20317569
Alignment:
Q  252 tagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcatttt 351  Q
    |||||| |||||| || ||| ||||||||||||| ||||| |||||||||||||||| |||||| | |||| |||| ||| | || |||  || |||||     
T  20317730 tagtctgtttgcaacagagcgagagtttaggagtaaacct-tttttgattgcagaatattagtgtcagttaagattcttcaagtcccctatatccatttg 20317632  T
Q  352 ttgttgttaattaatggtcaagcattattcag----attttacgtcttctatctaagtgatga 410  Q
     ||   |||||||||| |||||||||||||||    |||||||||||| ||||||| ||||||    
T  20317631 ctggaattaattaatgatcaagcattattcagattcattttacgtcttatatctaattgatga 20317569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 19900573 - 19900665
Alignment:
Q  97 gatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattca 189  Q
    ||||| ||||| | |||||||| ||||| ||| ||||||||||||||||||||||  ||| ||||| ||||| | || |||||||||||||||    
T  19900573 gatttaggcaagtgtaccaaattgtttaccaagtaataaagtgtaagtagagtatcatattcacaaagattgtcgttccaactaggcaattca 19900665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 22526371 - 22526439
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattgacatttcaac 178  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| | |||| | |||||||    
T  22526371 taccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaac 22526439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 25643474 - 25643546
Alignment:
Q  115 aaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaatt 187  Q
    ||||||||| |||| ||||||||||||| |||||||| ||||||||| || ||| |||||||| |||||||||    
T  25643474 aaatcgtttgtcaagtaataaagtgtaactagagtatcgtatccacaggggttgtcatttcaattaggcaatt 25643546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 25121315 - 25121260
Alignment:
Q  113 ccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  25121315 ccaaatcgtttaccaagtaataaagtgtaagtatagtatcgtatccacaaggattg 25121260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 11521283 - 11521225
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||    
T  11521283 taccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattg 11521225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 13908861 - 13908919
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||    
T  13908861 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattg 13908919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 17672009 - 17672067
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||    
T  17672009 taccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattg 17672067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 19374904 - 19374855
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccac 160  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  19374904 taccaaatcgtttatcaagtaataaaatgtaagtagagtatcgtatccac 19374855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 22176054 - 22176005
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatcca 159  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22176054 taccaaatcgtttatcaagtaataaagtgataagtagagtattgtatcca 22176005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 17216741 - 17216882
Alignment:
Q  26 taagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttat 125  Q
    |||||||||||||||| | | |||||||| ||||||| || ||| ||||| ||  ||||| ||||||||  ||| | ||||| | ||||||||||||||     
T  17216741 taagtaatttaaattg-cttagtcgaaaatatcaacattccccggcaacgacgctaaaaacttgatggtcagatat-ggcaaatgtaccaaatcgtttac 17216838  T
Q  126 caaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||  ||||||||| ||||||||||||  |||||||| ||||||    
T  17216839 caagcaataaagtgataagtagagtatcatatccacatggattg 17216882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 11490539 - 11490597
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||| ||||||||| |||||||||| |||||||||||| ||||||||| ||||||    
T  11490539 taccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattg 11490597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 17709764 - 17709822
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||||||| | ||||||    
T  17709764 taccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattg 17709822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 40215409 - 40215331
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttcaactaggcaattca 189  Q
    ||||| || ||||| ||||||||||||| |||||||| ||| |||||||||| ||| ||  || |||||||||||||||    
T  40215409 taccagattgtttaccaaataataaagtttaagtagattatcgtatccacaaagatagatgttccaactaggcaattca 40215331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 13129016 - 13128908
Alignment:
Q  60 acaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatcc 158  Q
    |||||| ||| ||||||||  ||||| |||||| || || || ||||| | |||||||||||||| ||| ||||||| || |||||||||||||||||||    
T  13129016 acaatccccgacaacggcgctaaaaacttgatg-ttcgaattaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatcc 13128918  T
Q  159 acaaggattg 168  Q
    | | ||||||    
T  13128917 atagggattg 13128908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 22218688 - 22218635
Alignment:
Q  115 aaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||| || |||||    
T  22218688 aaattgtttatcaagtaataaagtgtaagtagagtatcgtatccataaagattg 22218635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 26115995 - 26115938
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||||||| |||||| |||||| || ||||| ||||||| ||||||||    
T  26115995 taccaaatcgtttatcaagtaataacgtgtaattaaagtatcgtatccataaggattg 26115938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 10106995 - 10107075
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||| |||||| ||||| | || ||||||||||| ||| ||||||| || |||||||||||| |||||| | ||||||    
T  10106995 tgatggtcggatttaggcaagtgtagcaaatcgtttaccaagtaataaattgcaagtagagtattctatccatagggattg 10107075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 48640881 - 48640944
Alignment:
Q  242 ttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcaga 306  Q
    |||||||| ||||||| |||| |||| ||||||||||||| |||||||||  |||||||||||||    
T  48640881 ttttgcaatttagtctgtttgtagcagagcaagagtttagaagttaacct-gttttgattgcaga 48640944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 14648902 - 14648953
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| ||| |||||||||| |||||||||||| |||||||||    
T  14648902 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 14648953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 15050205 - 15050138
Alignment:
Q  80 caaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtaga 147  Q
    |||||| |||||||| |||||| ||||| | || |||||| |||| ||| ||||||||||||||||||    
T  15050205 caaaaacttgatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtaga 15050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 15104219 - 15104286
Alignment:
Q  80 caaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtaga 147  Q
    |||||| |||||||| |||||| ||||| | || |||||| |||| ||| ||||||||||||||||||    
T  15104219 caaaaacttgatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtaga 15104286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 12578358 - 12578300
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    ||||||||| |||| |||||||||||||| ||| |||||||| ||||||||| ||||||    
T  12578358 taccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattg 12578300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 13692761 - 13692703
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| ||||||||||||  |||||||| ||||||    
T  13692761 taccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattg 13692703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 19492792 - 19492734
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||| | |||||||||||| ||||||||||| ||||    
T  19492792 taccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattg 19492734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 20829830 - 20829773
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| ||| | |||||||||||||||||||||||    
T  20829830 taccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattg 20829773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 9052681 - 9052738
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||||| |||| ||| ||||||| |||||||||||||| |||||| ||| |||||    
T  9052681 taccaaatcatttaccaagtaataaaatgtaagtagagtatcgtatccgcaaagattg 9052738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 410
Target Start/End: Original strand, 10107161 - 10107322
Alignment:
Q  251 ttagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgttagtgacggttacgattattcgaatctccttcattcattt 350  Q
    ||||||| ||| ||||  |||||| ||| | ||||||||||  ||||||||| ||||||||   |  ||||| |||| |||||||| |||  ||||||||    
T  10107161 ttagtctgtttacagccgagcaagggttgacgagttaacctggttttgattggagaatgttttcggtggttatgattcttcgaatcccctctattcattt 10107260  T
Q  351 tttgttgttaattaa-tggtcaagcattattcagatttta-cgtcttctatctaagtgatga 410  Q
     |||   |||||||| | ||||||||| |||||| || || | |||||||||||||||||||    
T  10107261 gttggaattaattaaattgtcaagcatcattcagtttctaacatcttctatctaagtgatga 10107322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 13992968 - 13992911
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    |||||||| ||||| ||| |||||||||| |||||||||||| ||||||||| |||||    
T  13992968 taccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggatt 13992911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 22248 - 22364
Alignment:
Q  71 caacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgac 170  Q
    |||||||| |||||| |||||||| | |||| || ||   |||||||||||||| ||| |||| || |||||||||||||| |||| ||| ||||||| |    
T  22248 caacggcgccaaaaacttgatggtcgaatttaggaaaaggtaccaaatcgtttaccaattaatgaaatgtaagtagagtatggtatgcacgaggattgtc 22347  T
Q  171 atttcaactaggcaatt 187  Q
     | ||||||||||||||    
T  22348 gtatcaactaggcaatt 22364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 410
Target Start/End: Original strand, 22359 - 22525
Alignment:
Q  246 gcaaattagtctatttgcagcatagcaagagtttaggagttaacctc-tttttgattgcagaatgttagtgacggttacgattattcgaatctccttcat 344  Q
    |||| ||||||| |||||| || |  || |||||||||| ||||||  |||||||||||||| |||||  | | || | |||| |||||||| |||  ||    
T  22359 gcaatttagtctgtttgcaacaaaaaaatagtttaggagctaacctggtttttgattgcagattgttatcggcagtaaggattcttcgaatcccctctat 22458  T
Q  345 tcattttttgttgttaattaatggtcaagcattattcagatttt--acgtcttctatctaagtgatga 410  Q
    |||||| |||   ||| |  |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  22459 tcatttgttgaaattattctatggtcaagcattattca-attttcaacgtcttctatctaagtgatga 22525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 735 - 793
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||||| ||||||||||    
T  735 taccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattg 793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 54867 - 54925
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||    
T  54867 taccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattg 54925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 29914 - 29962
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtgtaagtagagtattgtatcca 159  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  29914 taccaaatcgtttaccaagtaataaagtgtaagtagagtatggtatcca 29962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 15386 - 15340
Alignment:
Q  294 ttttgattgcagaatgttagtgacggttacgattattcgaatctcct 340  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||    
T  15386 ttttgattgcagaatgttagcgacggttaggattcttcgaatctcct 15340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 115763 - 115837
Alignment:
Q  238 ggggttttgcaaattagtctatttgcagcatagcaagagtttaggagttaacctctttttgattgcagaatgtta 312  Q
    |||||||||||| ||||| | ||||||||  ||| ||| ||||||||| ||||| |||||||||||| |||||||    
T  115763 ggggttttgcaatttagtttgtttgcagccgagcgagattttaggagtaaacctatttttgattgcataatgtta 115837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 3164 - 3225
Alignment:
Q  115 aaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattgacatttca 176  Q
    |||| ||||| ||| |||||||||||| ||||||||| ||||||||| |||||| |||||||    
T  3164 aaattgtttaccaagtaataaagtgtatgtagagtatcgtatccacacggattgtcatttca 3225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 11224 - 11305
Alignment:
Q  88 tgatggttggatttgggcaattctaccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||||||| | ||| | ||| |||| |||||||||||||||||||| ||||||||||||  |||| ||| ||||||    
T  11224 tgatggttggatttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatctacatggattg 11305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 35549 - 35601
Alignment:
Q  116 aatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggatt 167  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||| |||||    
T  35549 aatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggatt 35601  T

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Target: scaffold0606 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 7799 - 7917
Alignment:
Q  26 taagtaatttaaattgcccttgtcgaaaacatcaacaatctccgtcaacggcgtcaaaaatttgatggttggatttgggcaattctaccaaatcgtttat 125  Q
    ||||||||||||||| || |||||||||| || ||||||  | | |||||||| |||||| |||||||| | |||| || || | |||  |||||||||     
T  7799 taagtaatttaaattacc-ttgtcgaaaatattaacaatacctggcaacggcgccaaaaacttgatggtcgaatttaggtaagtgtactcaatcgtttac 7897  T
Q  126 caaataataaagtgtaagta 145  Q
    ||| ||||||||| ||||||    
T  7898 caagtaataaagtttaagta 7917  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 168390 - 168339
Alignment:
Q  111 taccaaatcgtttatcaaataataaagtg-taagtagagtattgtatccaca 161  Q
    |||||||||||||| ||| |||||||||| |||||||||||| |||||||||    
T  168390 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 168339  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 5363 - 5321
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtat 156  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||    
T  5363 caaatcgtttatcaagtaataaaatgtaactagagtattgtat 5321  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 7500 - 7458
Alignment:
Q  115 aaatcgtttatcaaataataaagtg-taagtagagtattgtat 156  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  7500 aaatcgtttatcaagtaataaagtgataagtagagtattgtat 7458  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 89942 - 89888
Alignment:
Q  114 caaatcgtttatcaaataataaagtgtaagtagagtattgtatccacaaggattg 168  Q
    ||||||||||| ||| ||||||||||||||||||||||  |||| ||||| ||||    
T  89942 caaatcgtttaccaagtaataaagtgtaagtagagtatcatatctacaagtattg 89888  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 81498 - 81551
Alignment:
Q  115 aaatcgtttatcaaataataaagtg-taagtagagtattgtatccacaaggattg 168  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||    
T  81498 aaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattg 81551  T

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