View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2178_high_12 (Length: 228)
Name: NF2178_high_12
Description: NF2178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2178_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 212
Target Start/End: Original strand, 9016102 - 9016305
Alignment:
| Q |
9 |
agaagcataggacaagtcgtttggtaagagataagataatgttataatcatatgattagttagaaagaatggaccaggagagcaaatagaaatacgacta |
108 |
Q |
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| T |
9016102 |
agaaccatagaacaagtcgtttggtaagagataagataatgttataatcatatgattagttagaaagaatggaccaggagagcaaatagaaatacgacta |
9016201 |
T |
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| Q |
109 |
tgtgcttagaaaatggaattctacaatgaatgaaagggaaaacttaacggcatgctctaagcatagctagtgcaaattacaagctaaaggagataatcag |
208 |
Q |
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| T |
9016202 |
tgtgcttagaaaatggaattctacaatgaatgaaagggaaaacttaacggcatgctctaagcatagctagtgcaaattacaagctaaaggagataatcag |
9016301 |
T |
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| Q |
209 |
attg |
212 |
Q |
| |
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|||| |
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| T |
9016302 |
attg |
9016305 |
T |
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