View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2178_low_7 (Length: 335)

Name: NF2178_low_7
Description: NF2178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2178_low_7
NF2178_low_7
[»] chr4 (42 HSPs)
chr4 (15-322)||(18377478-18377785)
chr4 (62-335)||(5268852-5269131)
chr4 (33-335)||(25861685-25861993)
chr4 (29-335)||(16622946-16623257)
chr4 (62-310)||(10047547-10047796)
chr4 (29-335)||(16628525-16628836)
chr4 (62-335)||(36314882-36315160)
chr4 (62-335)||(36329091-36329369)
chr4 (29-259)||(3777681-3777918)
chr4 (62-259)||(6743143-6743345)
chr4 (53-240)||(5112394-5112588)
chr4 (29-335)||(54867316-54867624)
chr4 (29-257)||(42599305-42599537)
chr4 (63-335)||(8689149-8689425)
chr4 (15-182)||(24333929-24334099)
chr4 (15-259)||(39774032-39774283)
chr4 (95-259)||(5396399-5396569)
chr4 (63-182)||(3793889-3794010)
chr4 (72-259)||(5143437-5143629)
chr4 (62-182)||(38152249-38152368)
chr4 (80-221)||(31985399-31985545)
chr4 (29-182)||(1983111-1983265)
chr4 (72-259)||(5147855-5148047)
chr4 (99-216)||(28468305-28468430)
chr4 (62-160)||(37782029-37782128)
chr4 (125-182)||(51336978-51337035)
chr4 (71-141)||(873370-873440)
chr4 (125-182)||(6542378-6542435)
chr4 (40-141)||(34670517-34670618)
chr4 (125-173)||(4587881-4587929)
chr4 (119-216)||(24742168-24742273)
chr4 (272-335)||(26363803-26363866)
chr4 (125-161)||(5429614-5429650)
chr4 (125-161)||(5871755-5871791)
chr4 (125-161)||(13009628-13009664)
chr4 (267-335)||(24968866-24968934)
chr4 (119-182)||(29760868-29760934)
chr4 (125-161)||(45687380-45687416)
chr4 (125-161)||(48142977-48143013)
chr4 (125-182)||(48893839-48893898)
chr4 (125-161)||(52082854-52082890)
chr4 (125-161)||(52095559-52095595)
[»] chr5 (30 HSPs)
chr5 (29-335)||(11181482-11181796)
chr5 (29-216)||(28832389-28832583)
chr5 (62-235)||(24553279-24553458)
chr5 (63-335)||(11916624-11916901)
chr5 (29-216)||(31300366-31300560)
chr5 (63-257)||(17003689-17003889)
chr5 (80-335)||(14520415-14520674)
chr5 (63-335)||(12083830-12084106)
chr5 (29-182)||(10281884-10282040)
chr5 (61-182)||(19588910-19589031)
chr5 (80-219)||(9353100-9353244)
chr5 (61-182)||(7160715-7160836)
chr5 (80-252)||(15464719-15464896)
chr5 (30-137)||(42127266-42127374)
chr5 (95-335)||(36932002-36932246)
chr5 (95-210)||(42127147-42127268)
chr5 (29-182)||(3880432-3880588)
chr5 (99-216)||(38219603-38219728)
chr5 (94-208)||(35387862-35387984)
chr5 (40-125)||(2630375-2630460)
chr5 (18-122)||(6741973-6742076)
chr5 (99-217)||(24136053-24136180)
chr5 (125-161)||(13488138-13488174)
chr5 (29-161)||(33030770-33030905)
chr5 (125-161)||(33831615-33831651)
chr5 (60-138)||(30900031-30900108)
chr5 (62-139)||(5611308-5611385)
chr5 (125-161)||(533704-533740)
chr5 (125-161)||(5887613-5887649)
chr5 (125-161)||(19806319-19806355)
[»] chr3 (54 HSPs)
chr3 (62-335)||(47923545-47923824)
chr3 (29-335)||(40592423-40592736)
chr3 (29-335)||(8126763-8127075)
chr3 (62-335)||(1735945-1736224)
chr3 (29-335)||(24694807-24695118)
chr3 (63-335)||(39032197-39032472)
chr3 (62-329)||(48438382-48438654)
chr3 (30-297)||(25929075-25929349)
chr3 (29-216)||(3328117-3328311)
chr3 (63-335)||(16264517-16264793)
chr3 (62-290)||(21711389-21711621)
chr3 (63-259)||(36029261-36029462)
chr3 (29-208)||(3323459-3323645)
chr3 (63-259)||(8370206-8370407)
chr3 (80-256)||(27974672-27974853)
chr3 (62-335)||(30709438-30709709)
chr3 (18-259)||(35925601-35925849)
chr3 (29-182)||(25795914-25796068)
chr3 (29-208)||(1417259-1417445)
chr3 (61-216)||(37466460-37466621)
chr3 (29-146)||(18552721-18552837)
chr3 (29-216)||(26299121-26299314)
chr3 (63-182)||(3715800-3715921)
chr3 (63-182)||(47649737-47649858)
chr3 (80-218)||(27986214-27986357)
chr3 (80-221)||(33386430-33386576)
chr3 (63-286)||(6794405-6794633)
chr3 (80-252)||(27453145-27453319)
chr3 (95-220)||(32143522-32143653)
chr3 (29-210)||(40844784-40844975)
chr3 (29-183)||(21353694-21353852)
chr3 (95-220)||(26928355-26928486)
chr3 (95-259)||(37725874-37726044)
chr3 (99-216)||(1306153-1306278)
chr3 (115-335)||(27026925-27027150)
chr3 (115-259)||(27038270-27038420)
chr3 (113-182)||(4386777-4386846)
chr3 (128-182)||(23410529-23410583)
chr3 (125-182)||(23392106-23392163)
chr3 (62-150)||(5366154-5366244)
chr3 (125-335)||(40734254-40734469)
chr3 (119-216)||(2671350-2671455)
chr3 (119-216)||(9091065-9091170)
chr3 (119-216)||(40372560-40372665)
chr3 (119-182)||(8477592-8477657)
chr3 (119-182)||(8738867-8738932)
chr3 (62-139)||(21156595-21156672)
chr3 (125-161)||(5236653-5236689)
chr3 (125-161)||(9581218-9581254)
chr3 (125-161)||(19684086-19684122)
chr3 (125-161)||(29682294-29682330)
chr3 (125-161)||(32891038-32891074)
chr3 (125-161)||(39153558-39153594)
chr3 (125-161)||(44331480-44331516)
[»] scaffold0006 (3 HSPs)
scaffold0006 (63-335)||(5852-6130)
scaffold0006 (63-335)||(2661-2938)
scaffold0006 (80-259)||(133007-133191)
[»] chr1 (42 HSPs)
chr1 (63-335)||(13598567-13598845)
chr1 (62-335)||(29651979-29652258)
chr1 (29-257)||(47098555-47098789)
chr1 (40-257)||(47102569-47102792)
chr1 (63-335)||(3281875-3282151)
chr1 (63-335)||(21536223-21536499)
chr1 (46-182)||(40816625-40816763)
chr1 (80-335)||(37069952-37070212)
chr1 (29-216)||(32889572-32889764)
chr1 (40-335)||(22819573-22819875)
chr1 (64-216)||(9476430-9476588)
chr1 (62-160)||(16124347-16124445)
chr1 (39-241)||(9022652-9022858)
chr1 (62-182)||(19073094-19073216)
chr1 (62-182)||(19120984-19121106)
chr1 (64-216)||(27104173-27104330)
chr1 (80-259)||(13604350-13604534)
chr1 (29-182)||(47703744-47703900)
chr1 (63-259)||(26644625-26644827)
chr1 (99-216)||(19358611-19358735)
chr1 (99-216)||(19361200-19361324)
chr1 (99-216)||(19366075-19366200)
chr1 (99-216)||(24202536-24202661)
chr1 (40-161)||(11031306-11031427)
chr1 (99-147)||(19379916-19379964)
chr1 (55-141)||(8281477-8281563)
chr1 (18-107)||(35109423-35109513)
chr1 (201-335)||(49918105-49918238)
chr1 (18-81)||(32736908-32736972)
chr1 (125-161)||(46064853-46064889)
chr1 (292-329)||(3189114-3189151)
chr1 (292-329)||(3197931-3197968)
chr1 (292-329)||(3206749-3206786)
chr1 (125-161)||(197105-197141)
chr1 (125-161)||(834364-834400)
chr1 (125-161)||(3847318-3847354)
chr1 (125-161)||(10925158-10925194)
chr1 (125-161)||(13138171-13138207)
chr1 (281-329)||(16455408-16455456)
chr1 (125-161)||(23555462-23555498)
chr1 (125-161)||(30476645-30476681)
chr1 (125-161)||(50167372-50167408)
[»] chr2 (42 HSPs)
chr2 (62-335)||(21630111-21630390)
chr2 (62-329)||(33528282-33528555)
chr2 (29-335)||(34388983-34389295)
chr2 (29-335)||(14698661-14698972)
chr2 (29-329)||(33118269-33118574)
chr2 (62-335)||(20522388-20522667)
chr2 (29-257)||(40015058-40015292)
chr2 (63-335)||(23078124-23078400)
chr2 (63-335)||(10706905-10707182)
chr2 (29-182)||(31056177-31056331)
chr2 (62-259)||(17865371-17865573)
chr2 (80-289)||(36757460-36757674)
chr2 (29-182)||(2869503-2869657)
chr2 (63-257)||(13569496-13569697)
chr2 (80-259)||(28258905-28259089)
chr2 (81-216)||(10445238-10445379)
chr2 (29-182)||(39483064-39483219)
chr2 (29-182)||(8040195-8040352)
chr2 (29-218)||(8389918-8390114)
chr2 (29-182)||(34682142-34682298)
chr2 (29-182)||(15903701-15903855)
chr2 (95-210)||(40739033-40739154)
chr2 (40-182)||(2837838-2837983)
chr2 (40-182)||(35397654-35397795)
chr2 (99-216)||(3491955-3492080)
chr2 (53-165)||(3278157-3278270)
chr2 (107-182)||(25409842-25409919)
chr2 (18-150)||(28770616-28770750)
chr2 (104-182)||(1344355-1344435)
chr2 (18-158)||(18674235-18674377)
chr2 (115-182)||(41586361-41586429)
chr2 (99-147)||(9296243-9296292)
chr2 (292-335)||(2334786-2334829)
chr2 (119-216)||(11098691-11098796)
chr2 (125-161)||(11151788-11151824)
chr2 (125-161)||(11690436-11690472)
chr2 (125-161)||(14202604-14202640)
chr2 (125-161)||(29867804-29867840)
chr2 (125-161)||(34139968-34140004)
chr2 (125-161)||(36773497-36773533)
chr2 (125-161)||(39284820-39284856)
chr2 (125-161)||(42362287-42362323)
[»] chr6 (28 HSPs)
chr6 (29-335)||(24435624-24435935)
chr6 (18-216)||(31936698-31936901)
chr6 (29-216)||(31979646-31979838)
chr6 (29-335)||(31086125-31086437)
chr6 (29-259)||(5571972-5572205)
chr6 (29-182)||(21801153-21801308)
chr6 (95-259)||(5757206-5757376)
chr6 (84-335)||(5017148-5017405)
chr6 (94-220)||(22709208-22709340)
chr6 (62-146)||(18233013-18233096)
chr6 (62-335)||(22963866-22964143)
chr6 (62-335)||(23824250-23824527)
chr6 (29-134)||(10077027-10077129)
chr6 (189-335)||(18234382-18234528)
chr6 (40-173)||(14521817-14521953)
chr6 (62-146)||(4630120-4630203)
chr6 (72-173)||(21356214-21356314)
chr6 (41-220)||(31076702-31076888)
chr6 (181-335)||(10076843-10076997)
chr6 (136-335)||(21272641-21272846)
chr6 (99-182)||(5674574-5674660)
chr6 (62-161)||(33721390-33721489)
chr6 (181-259)||(23896643-23896721)
chr6 (18-98)||(1114999-1115080)
chr6 (90-146)||(5385789-5385845)
chr6 (127-161)||(31404872-31404906)
chr6 (125-161)||(28137605-28137641)
chr6 (125-161)||(33211382-33211418)
[»] chr8 (31 HSPs)
chr8 (29-256)||(4696339-4696571)
chr8 (63-335)||(23799228-23799506)
chr8 (62-259)||(5702208-5702412)
chr8 (62-259)||(7412507-7412709)
chr8 (29-335)||(3051252-3051566)
chr8 (29-216)||(19752165-19752358)
chr8 (80-258)||(4456213-4456396)
chr8 (40-174)||(7492992-7493126)
chr8 (63-182)||(26403038-26403159)
chr8 (85-182)||(9054231-9054328)
chr8 (63-256)||(19175482-19175683)
chr8 (62-182)||(6127389-6127511)
chr8 (30-235)||(28307695-28307908)
chr8 (40-169)||(5990385-5990514)
chr8 (99-182)||(31071036-31071121)
chr8 (99-216)||(1261721-1261846)
chr8 (99-216)||(26288095-26288220)
chr8 (99-216)||(26301352-26301477)
chr8 (99-216)||(26313346-26313471)
chr8 (61-142)||(13204634-13204715)
chr8 (29-141)||(31513185-31513296)
chr8 (119-182)||(4759878-4759944)
chr8 (119-182)||(10688944-10689009)
chr8 (128-161)||(4162435-4162468)
chr8 (125-161)||(4731593-4731629)
chr8 (125-161)||(15212721-15212757)
chr8 (125-161)||(18106275-18106311)
chr8 (125-161)||(27811213-27811249)
chr8 (125-161)||(33352085-33352121)
chr8 (119-182)||(36979605-36979669)
chr8 (125-161)||(43036358-43036394)
[»] chr7 (40 HSPs)
chr7 (29-335)||(2647349-2647660)
chr7 (61-301)||(4796355-4796600)
chr7 (61-335)||(33332102-33332382)
chr7 (40-216)||(20284233-20284415)
chr7 (29-216)||(23402784-23402978)
chr7 (30-216)||(2580523-2580715)
chr7 (61-216)||(46516076-46516237)
chr7 (29-257)||(3047387-3047622)
chr7 (29-216)||(9189777-9189972)
chr7 (29-182)||(9184985-9185139)
chr7 (18-182)||(5817081-5817246)
chr7 (98-259)||(21989110-21989277)
chr7 (29-182)||(29159936-29160093)
chr7 (29-170)||(9235405-9235547)
chr7 (29-157)||(35960949-35961078)
chr7 (95-256)||(2479535-2479702)
chr7 (80-221)||(47263851-47263997)
chr7 (62-157)||(49091829-49091924)
chr7 (62-142)||(56115-56195)
chr7 (103-221)||(44847891-44848015)
chr7 (99-216)||(18413843-18413968)
chr7 (99-216)||(21640013-21640138)
chr7 (99-216)||(21646211-21646336)
chr7 (72-146)||(21983463-21983536)
chr7 (125-259)||(49091918-49092058)
chr7 (99-216)||(18408967-18409092)
chr7 (142-257)||(79634-79755)
chr7 (99-216)||(1533208-1533334)
chr7 (125-161)||(25615798-25615834)
chr7 (125-161)||(47674140-47674176)
chr7 (272-335)||(3050492-3050555)
chr7 (119-182)||(2058196-2058261)
chr7 (270-335)||(26417069-26417134)
chr7 (124-161)||(41649206-41649243)
chr7 (125-161)||(4586096-4586132)
chr7 (125-161)||(31733166-31733202)
chr7 (125-161)||(38671419-38671455)
chr7 (125-161)||(43864179-43864215)
chr7 (125-161)||(47676333-47676369)
chr7 (125-161)||(48489366-48489402)
[»] scaffold0036 (1 HSPs)
scaffold0036 (63-259)||(85850-86052)
[»] scaffold0087 (2 HSPs)
scaffold0087 (80-259)||(36560-36744)
scaffold0087 (80-259)||(43689-43873)
[»] scaffold0078 (1 HSPs)
scaffold0078 (29-235)||(23664-23878)
[»] scaffold0148 (1 HSPs)
scaffold0148 (63-182)||(10897-11019)
[»] scaffold0140 (1 HSPs)
scaffold0140 (80-218)||(8186-8329)
[»] scaffold0098 (1 HSPs)
scaffold0098 (80-221)||(45383-45530)
[»] scaffold0188 (2 HSPs)
scaffold0188 (99-216)||(17719-17844)
scaffold0188 (99-216)||(23812-23937)
[»] scaffold0176 (1 HSPs)
scaffold0176 (111-234)||(17466-17596)
[»] scaffold0016 (1 HSPs)
scaffold0016 (17-107)||(102380-102471)


Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 15 - 322
Target Start/End: Original strand, 18377478 - 18377785
Alignment:
Q  15 agaaacaaaccctgatttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtg 114  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18377478 agaaacaagccctaatttctacccattttcatgtcacccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggta 18377577  T
Q  115 aaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaaagttaactcctttgtaatccaagtttctttct 214  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18377578 aaatctcattacccaaggggtttacaatgttttccatcccaagagaacctcactacaaatacactcaaagttaactcctttgtaatccaagtttctttct 18377677  T
Q  215 cttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgt 314  Q
    ||||||| | |||||||||||||||||| || ||||||| || |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||    
T  18377678 cttcaagctctccttcaaaaactgaacagaaacacttatgtaacattcatgcattgtcaaaatcgtgtcacgattgaccaaattgtgtcacgattgatgt 18377777  T
Q  315 gtacgacc 322  Q
    ||||||||    
T  18377778 gtacgacc 18377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 62 - 335
Target Start/End: Complemental strand, 5269131 - 5268852
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||     
T  5269131 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagat 5269032  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | |||||||||    
T  5269031 cctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatat 5268932  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     |||| ||||||| |||||| ||| |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  5268931 agcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 5268852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 33 - 335
Target Start/End: Complemental strand, 25861993 - 25861685
Alignment:
Q  33 ctacccattttcatgtcagccacacttacaatgaatcctaaga-aaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaag 131  Q
    |||||||||||  ||||| |||||||  ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  25861993 ctacccattttg-tgtcacccacactctcaatgaatcctaagagaaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactactcaag 25861895  T
Q  132 gtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttat 225  Q
    ||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| || ||||||||||||||||||| |||||  ||| | |    
T  25861894 gtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttaccttctttgtaatccaagtttctctctctaaaagctct 25861795  T
Q  226 ccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaa 325  Q
    ||||||||| ||| | | || ||||||||||| | ||    ||||||||||||| |||||| ||| |||||| ||| ||||||||| | |||||||||||    
T  25861794 ccttcaaaatctgcaaagaaacacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgacccaa 25861695  T
Q  326 ggtatgacca 335  Q
    |||| |||||    
T  25861694 ggtacgacca 25861685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 16623257 - 16622946
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  16623257 atttctacccattttg-tgtcacccactctcacaatatgaatcctaaaagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactac 16623160  T
Q  127 ccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaa 220  Q
    |||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||||||||||||||||| ||||||| |    
T  16623159 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcta 16623060  T
Q  221 gttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacga 320  Q
    | | |||||||||| ||| |||||| |||||||||||||  |     |||||||||||| |||||| ||  |||||| ||| ||||||||  | ||||||    
T  16623059 gctctccttcaaaatctgcacaaaaacacttatatagcagccttcacctgtcaaaatcgtgtcacg-ttttccaaatcgtgacacgattggtgcgtacga 16622961  T
Q  321 cccaaggtatgacca 335  Q
    ||||||||| |||||    
T  16622960 cccaaggtacgacca 16622946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 62 - 310
Target Start/End: Original strand, 10047547 - 10047796
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  10047547 aatgaatcctaagacaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 10047646  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     |||| |||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | ||||  |||    
T  10047647 cctcattacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacact--tat 10047744  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattg 310  Q
    ||  ||||   ||||||||||||| |||||| ||| |||||| ||| ||||||||    
T  10047745 agtcttca---actgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattg 10047796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 16628836 - 16628525
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  16628836 atttctacccattttg-tgtcacccactctcacaatatgaatcctaaaagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactac 16628739  T
Q  127 ccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaa 220  Q
    |||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||| ||||||| ||||| ||||||| |    
T  16628738 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaattttctctctcttcta 16628639  T
Q  221 gttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacga 320  Q
    | | |||||||||| |||||||||| |||||||||||||  |     |||||||||||| |||||| ||  |||||| ||| ||||||||  | ||||||    
T  16628638 gctctccttcaaaatctgaacaaaaacacttatatagcagccttcatctgtcaaaatcgtgtcacg-ttttccaaatcgtgacacgattggtgcgtacga 16628540  T
Q  321 cccaaggtatgacca 335  Q
    ||||||||| |||||    
T  16628539 cccaaggtacgacca 16628525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 62 - 335
Target Start/End: Complemental strand, 36315160 - 36314882
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||| |||||||||     
T  36315160 aatgaatcctacgaaaaaacacaaaaggaagctttt-gatccttccaatggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagat 36315062  T
Q  162 tctcactacaaatacact------caaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||| ||||||| |||||       ||||||| |||||||||||||||||||| | |||||||||| | |||||||||| ||| |||| | |||||||||    
T  36315061 cctctctacaaagacactaaaccctaaagttacctcctttgtaatccaagtttatctctcttcaagctctccttcaaaatctgcacaagaacacttatat 36314962  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     |||||||||||| |||||| ||| |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  36314961 agcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 36314882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 62 - 335
Target Start/End: Complemental strand, 36329369 - 36329091
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||| |||||||||     
T  36329369 aatgaatcctacgaaaaaacacaaaaggaagctttt-gatccttccaatggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagat 36329271  T
Q  162 tctcactacaaatacact------caaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||| ||||||| |||||       ||||||| |||||||||||||||||||| | |||||||||| | |||||||||| ||| |||| | |||||||||    
T  36329270 cctctctacaaagacactaaaccctaaagttacctcctttgtaatccaagtttatctctcttcaagctctccttcaaaatctgcacaagaacacttatat 36329171  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     |||||||||||| |||||| ||| |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  36329170 agcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 36329091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 3777681 - 3777918
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  3777681 atttctacccattttg-tgtcacccactctcacaatatgaatcctaagagaaaatacaaaaggaagctttttgatcattccaatggtgaaatctcactac 3777779  T
Q  127 ccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaa 220  Q
    |||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||    
T  3777780 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaa 3777879  T
Q  221 gttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    | |  ||||||||| ||| |||| | || ||||||||||    
T  3777880 gctcaccttcaaaatctgcacaagaacatttatatagca 3777918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 62 - 259
Target Start/End: Complemental strand, 6743345 - 6743143
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||     
T  6743345 aatgaatcctaagagaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagat 6743247  T
Q  162 tctcactacaaatacactca------aagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||| ||||||| |||||||      |||||| |||||||||||||||||||||| |||||||||| | | |||||||| ||| |||| | |||||||||    
T  6743246 cctcgctacaaagacactcaaacctcaagttacctcctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcacaagaacacttatat 6743147  T
Q  256 agca 259  Q
    ||||    
T  6743146 agca 6743143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 5112394 - 5112588
Alignment:
Q  53 cacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatc 152  Q
    |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  5112394 cacactcacaatgaatcctaagagaaaacataaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaac 5112493  T
Q  153 ccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatc-caagtttctttctcttcaagttatccttcaaaaactgaa 240  Q
    ||||||||| ||||| ||||| ||||||      ||| ||| ||||||||||||| ||||||||| |||||||||| | ||||  ||||||||||    
T  5112494 ccaagagaacctcacaacaaagacactcaaacctaaaattacctcctttgtaatctcaagtttctctctcttcaagctctcctaaaaaaactgaa 5112588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 335
Target Start/End: Original strand, 54867316 - 54867624
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatg--aagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||    
T  54867316 atttctacccattttg-tgtcatccacact--caatgaatcctaagagaaaacacaaaaaagaaagctttttgatccttccaatggtgaaatctcactac 54867412  T
Q  127 ccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaa 220  Q
    |||  ||||||||||    ||||| ||||||||| |||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||    
T  54867413 ccatagtgtttacaa---cttccaacccaagagattctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaa 54867509  T
Q  221 gttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacga 320  Q
    | | |||| ||||| ||| |||| | ||||||||||| | ||     |||||||||||| |||||| ||| |||||| ||| ||||||||  | ||||||    
T  54867510 gctctcctccaaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacga 54867609  T
Q  321 cccaaggtatgacca 335  Q
     |||||||| |||||    
T  54867610 tccaaggtacgacca 54867624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 29 - 257
Target Start/End: Complemental strand, 42599537 - 42599305
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| || ||||  ||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  42599537 atttctacccattttg-tgtcacccgcactctcaatgaatcctaagagaaaacacaaaaggaagtttttttatccttccaatggtgaaatctcactaccc 42599439  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc-----aaagttaactcctttgtaatccaagtttctttctcttcaagtt 223  Q
    |||||||||| ||||||| ||| || ||||||| ||||||||||| ||||||     ||||||| |||||||||||||||||||||| || ||  ||| |    
T  42599438 aaggtgtttagaatgtttcccaaccgaagagaacctcactacaaagacactcaacctaaagttacctcctttgtaatccaagtttctctcactaaaagct 42599339  T
Q  224 atccttcaaaaactgaacaaaagcacttatatag 257  Q
     |||||||||| ||| | | || |||||||||||    
T  42599338 ctccttcaaaatctgcaaagaaacacttatatag 42599305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 8689425 - 8689149
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||      
T  8689425 atgaaccctaagagaagacacaaaaggaaactttt-gatccttccaatggtgaaatctcactatccaaggtgtttaaaatgtttcccaacccaagagatc 8689327  T
Q  163 ctcactacaaatacact------caaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| |||||       ||||||| |||||||||||||||||||||| || ||||||| | |||||||||| ||| |||| | ||||||||||    
T  8689326 ctcactacaaagacactaaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatata 8689227  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||  |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  8689226 gcagtcttcagctgtcaaaatcgtgtcacg-ttttccaaatcgtggcacgattggtgcgtacgacccaaggtacgacca 8689149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 24333929 - 24334099
Alignment:
Q  15 agaaacaaaccctgatttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatgg 112  Q
    ||||| ||| ||| |||||||||||||||  |||||||||| || |||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  24333929 agaaaaaaaacctaatttctacccattttg-tgtcagccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatgg 24334027  T
Q  113 tgaaatctcactacccaaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||||||||||||||| ||| ||  |||||||| ||||||||||| || |||||    
T  24334028 tgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagactctcaa 24334099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 39774283 - 39774032
Alignment:
Q  15 agaaacaaaccctgatttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtg 114  Q
    ||||||||  ||| ||||||||| ||||||||||||  ||||||  |||||||||| |||| |||| |||||| |||||||||||||| |||||||||||    
T  39774283 agaaacaagacctaatttctaccaattttcatgtcactcacactctcaatgaatcccaagagaaaatacaaaaggaagctttttgatcattccaatggtg 39774184  T
Q  115 aaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgt-aatccaagtt 207  Q
    ||| |||||||||||||||||||||||||||| ||| | |||||||| |||  ||||||||  |||      ||||||| ||||||||| || |||||||    
T  39774183 aaaactcactacccaaggtgtttacaatgtttcccaactcaagagaacctcgttacaaataatctcaaccctaaagttacctcctttgtaaacccaagtt 39774084  T
Q  208 tctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    ||| |||||| ||  | | |||||||| ||||||| || |||||||||||||    
T  39774083 tctctctctttaaactctacttcaaaatctgaacataaacacttatatagca 39774032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 95 - 259
Target Start/End: Complemental strand, 5396569 - 5396399
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaa 188  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||| |     
T  5396569 ttttgattcttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtaac 5396470  T
Q  189 ctcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |||||||||||||||||||||| ||||||| || | |||||||||| |||  ||| | |||||||||||||    
T  5396469 ctcctttgtaatccaagtttctctctcttccagctctccttcaaaatctgctcaagaacacttatatagca 5396399  T

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Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 3794010 - 3793889
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagaga 160  Q
    |||||||||||||  |||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||  |||||||    
T  3794010 atgaatcctaagagcaaacacaaaaggaagctttttgatcctttctatggtgaaatctcactacccaaggtgtttacaatgttttccaaccctcaagaga 3793911  T
Q  161 atctcactacaaatacactcaa 182  Q
    | ||||||| ||| ||||||||    
T  3793910 acctcactataaagacactcaa 3793889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 259
Target Start/End: Original strand, 5143437 - 5143629
Alignment:
Q  72 aagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactaca 171  Q
    |||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||||| |||| |||  ||||||||  |||||||||    
T  5143437 aagagaaaacacaaaaggaagcttat-gatccttccaatggtgaaatctcactacctaaggtgtttacaaagtttcccaatccaagagatcctcactaca 5143535  T
Q  172 aatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    || ||||||      ||||||| ||||| |||||||||||||||| |  ||||||| | |||||||||| ||| |||| | |||||||||||||    
T  5143536 aagacactcaaccctaaagttacctcctctgtaatccaagtttctcttacttcaagctctccttcaaaatctgcacaagaacacttatatagca 5143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 38152368 - 38152249
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| | ||||||||||||||||||||||| ||| |||||||||||||     
T  38152368 aatgaatcctaagagaaaacacaaatggaagctttt-gatccttccaatggtgaattgtcactacccaaggtgtttacaatatttcccatcccaagagat 38152270  T
Q  162 tctcactacaaatacactcaa 182  Q
     ||||||||||| ||||||||    
T  38152269 cctcactacaaagacactcaa 38152249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 31985545 - 31985399
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |||||||||  |||| |||||| |||||    
T  31985545 acacaaaaggaagctttt-gatccttcccatggtgaaatttcactacccaaggtgtttacaatgtttcccaacccaagagatcctcaatacaaaaacact 31985447  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaag 221  Q
    |      ||||||  |||||||||||||||||||||| ||||||||||    
T  31985446 caaccctaaagttccctcctttgtaatccaagtttctctctcttcaag 31985399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 1983265 - 1983111
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtg-aaatctcactacc 127  Q
    ||||||| || |||||| |||| | |||||  ||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||| |||||| |||| |    
T  1983265 atttctatcctttttcaagtcacctacactctcaatgaatcctaagagaaaacccaaaaggaagcttttttatccttccaatggtgaaaatcttactaac 1983166  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    || |||||||||||||||   || ||||||| || ||||||||||| ||||||||    
T  1983165 cagggtgtttacaatgttacacaacccaagataacctcactacaaagacactcaa 1983111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 259
Target Start/End: Original strand, 5147855 - 5148047
Alignment:
Q  72 aagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactaca 171  Q
    |||| ||||||||||| ||||||| | |||||||||||||||||||||||| || |||| ||||||||||||||| ||| | |||||||  || ||||||    
T  5147855 aagagaaaacacaaaaggaagcttat-gatccttccaatggtgaaatctcattatccaatgtgtttacaatgtttcccaactcaagagatccttactaca 5147953  T
Q  172 aatacact------caaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    || |||||       ||||||| ||||| |||||||||||||||| ||  |||||| | |||||||||| ||| |||| | |||||||||||||    
T  5147954 aagacactaaaccctaaagttacctcctgtgtaatccaagtttctctcatttcaagctctccttcaaaatctgcacaagaacacttatatagca 5148047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 28468430 - 28468305
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  ||| |||||||||  ||||||||||| ||||| ||      ||||  ||    
T  28468430 gatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagttccct 28468331  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  28468330 cctttgtaatccaagtttctctctct 28468305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 37782029 - 37782128
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgttttccatcccaagaga 160  Q
    |||||||| ||||| ||||||| ||| ||  ||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  37782029 aatgaatcttaagagaaaacactaaaagagactttttgattcttccaataatgaaatctcactacccaaggtgtttacaaatgttttccaacccaagaga 37782128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 51337035 - 51336978
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||||    
T  51337035 acccaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacattcaa 51336978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 873440 - 873370
Alignment:
Q  71 taagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 141  Q
    ||||| |||||||||||||||||||||||||||| ||  |  ||| |||||||||| ||||||||||||||    
T  873440 taagagaaaacacaaaatgaagctttttgatcctccctctaatgagatctcactactcaaggtgtttacaa 873370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 6542378 - 6542435
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||| ||| |||||||||| |||| |||||| ||||||||    
T  6542378 acccaaggtgtttacaatgtttcccaacccaagagaacctcattacaaagacactcaa 6542435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 34670618 - 34670517
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    |||||| ||||  |||||| |||||||||||||||| ||||||| |||  || ||||| |||||||||  |  ||| ||||||||||||||| || ||||    
T  34670618 ttttcaagtcactcacactcacaatgaatcctaagagaaaacactaaagaaaacttttagatccttcctctaatgagatctcactacccaagatgcttac 34670519  T
Q  140 aa 141  Q
    ||    
T  34670518 aa 34670517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 4587929 - 4587881
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaatctcactacaaa 173  Q
    |||||||||||||||||||||| ||| |||| ||||| |||||||||||    
T  4587929 acccaaggtgtttacaatgtttcccaacccatgagaacctcactacaaa 4587881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 24742168 - 24742273
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttct 210  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||       |||  ||||||||||||||||||||||    
T  24742168 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttct 24742267  T
Q  211 ttctct 216  Q
     |||||    
T  24742268 ctctct 24742273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 335
Target Start/End: Complemental strand, 26363866 - 26363803
Alignment:
Q  272 caaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||||||| |||||||||  |||||||||| |||| |||  | |||||||||||||||||||||    
T  26363866 caaaatcgtgtcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtatgacca 26363803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 5429650 - 5429614
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  5429650 acccaaggtgtttacaatgtttcccaacccaagagaa 5429614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 5871791 - 5871755
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  5871791 acccaaggtgtttacaatgtttcccaacccaagagaa 5871755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 13009628 - 13009664
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  13009628 acccaaggtgtttacaatgtttcccaacccaagagaa 13009664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 24968934 - 24968866
Alignment:
Q  267 actgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||||||| |||| |||||||||| | ||||  |||||||||||| | ||||||||||| ||| |||||    
T  24968934 actgtcaatatcgtgtcacgattggcaaaatcatgtcacgattgaagcgtacgacccaatgtacgacca 24968866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 29760868 - 29760934
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt---ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||| ||||||||||||   ||| |||||||||  ||| ||||||| ||||||||    
T  29760868 ctcactacccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaa 29760934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 45687380 - 45687416
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  45687380 acccaaggtgtttacaatgtttcccaacccaagagaa 45687416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 48143013 - 48142977
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  48143013 acccaaggtgtttacaatgtttcccaacccaagagaa 48142977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 48893839 - 48893898
Alignment:
Q  125 acccaaggtgtttacaatgttttccatccc--aagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||| | | |||  ||||||| ||||||||||| ||||||||    
T  48893839 acccaaggtgtttacaatgtttccaaaccctaaagagaacctcactacaaagacactcaa 48893898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 52082854 - 52082890
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  52082854 acccaaggtgtttacaatgtttcccaacccaagagaa 52082890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 52095559 - 52095595
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  52095559 acccaaggtgtttacaatgtttcccaacccaagagaa 52095595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 3e-70; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 11181796 - 11181482
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  11181796 atttctacccattttcatgtcacccacactcacaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatttcactaccc 11181697  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||| ||||||      ||||||| ||||||||||| |||||||||| ||||||||||     
T  11181696 aaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccataaagttacctcctttgtaaaccaagtttctctctcttcaagc 11181597  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagca---ttcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacg 319  Q
    | | |||||||||||| | || | |||||||||| ||   ||||    |||| ||||  | ||||||||||||||||||||| |||| ||||   ||||     
T  11181596 tctacttcaaaaactgca-aagaacacttatataacagtcttcatcagctgtaaaaaatgtgtcacgattgaccaaattgtgacacggttgatacgtaca 11181498  T
Q  320 acccaaggtatgacca 335  Q
    ||||| ||||||||||    
T  11181497 acccacggtatgacca 11181482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 216
Target Start/End: Original strand, 28832389 - 28832583
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| |||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28832389 atttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacc 28832488  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||    
T  28832489 caaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaactctaaagttacctcctttgtaatccaagtttctctctct 28832583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 62 - 235
Target Start/End: Complemental strand, 24553458 - 24553279
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||| |||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  24553458 aatgaattctaagagaaaacacaaaaggaagctttttgatccttctaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaa 24553359  T
Q  162 tctcactacaaatacactca------aagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaa 235  Q
     ||||||||||| |||||||      |||||| ||||||||||||||||||||||||||||  ||||| |||||||||||    
T  24553358 cctcactacaaagacactcaacccttaagttacctcctttgtaatccaagtttctttctctaaaagttctccttcaaaaa 24553279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 11916901 - 11916624
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||      
T  11916901 atgaaccctaagagaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 11916803  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| | ||||      ||||||| |||||||||||||||||||||| || ||||||| | |||||||||| ||| |||| | ||||||||||    
T  11916802 ctcactacaaagaaactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatata 11916703  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| |     ||||||||||||| |||||| ||   ||||| |||  |||||||  | ||||||||||||||| |||||    
T  11916702 gcagttttcaactgtcaaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaaggtacgacca 11916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 31300560 - 31300366
Alignment:
Q  29 atttctacccattt-tcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    |||||||||||||| |||| ||| |||||||  ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  31300560 atttctacccatttctcatatcacccacactctcaatgaatcctaagagaaaacacaaaaggaagccttttgatccttccaatggtgaaatctcactacc 31300461  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||  || |||||||||| ||||||||||| ||||||      ||||||| |||||||| ||||||||||||| |||||    
T  31300460 caaggtgtttacaatgtttctcaacccaagagaacctcactacaaagacactcaaccttaaagttacctcctttgcaatccaagtttctctctct 31300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 63 - 257
Target Start/End: Complemental strand, 17003889 - 17003689
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||     
T  17003889 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttccaaacccaagagaac 17003790  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||| ||      ||||||| |||||||||||||||||||||| |||||  ||| | |||||||||| ||| | | || ||||||||||    
T  17003789 ctcactacaaagacattcaaccctaaagttatctcctttgtaatccaagtttctctctctcaaagctctccttcaaaatctgcaaagaaacacttatata 17003690  T
Q  257 g 257  Q
    |    
T  17003689 g 17003689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 335
Target Start/End: Original strand, 14520415 - 14520674
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||  ||||||||||| |||||    
T  14520415 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 14520513  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtca 273  Q
    |      ||||||| ||||||||||||| |||||||| |||||||||| | |||||||||| ||| |||| | ||||||||||| | ||     ||||||    
T  14520514 caaccctaaagttacctcctttgtaatctaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatataggagtctccagctgtca 14520613  T
Q  274 aaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||||| |||||| ||  |||||| ||| ||||||| | | ||||||||||||||| |||||    
T  14520614 aaatcgtgtcacg-ttttccaaatcgtgacacgattaatgcgtacgacccaaggtacgacca 14520674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 12084106 - 12083830
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaa-tggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||| ||||||| ||||||||||||||||||||| ||||||| ||| |||||||||     
T  12084106 atgaatcctaagaaaaaacacaaaaggaagctttt--atccttccaaatggtgaattctcactacccaaggtgtttaaaatgtttaccaacccaagagat 12084009  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||| ||| ||||||      ||||||| |||||||||||||||||||||| || |||| || | |||||||||| ||| |||| | |||||||||    
T  12084008 cctcactataaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttctagctctccttcaaaatctgcacaagaacacttatat 12083909  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||    ||||||||||| | |||||| ||  |||||| ||| ||||||||  |  |||||||||||||| |||||    
T  12083908 agcagtcttcaactgtcaaaattgtgtcacg-ttttccaaatcgtgacacgattggtgcatacgacccaaggtacgacca 12083830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 10281884 - 10282040
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| ||||||| |||||  ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  10281884 atttctacccattttg-tgtcacccacactcacaatatgaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactac 10281982  T
Q  127 ccaaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||||||  || ||  |||||||| ||||||||||| ||||||||    
T  10281983 ccaaggtgtttacaatgtttcacaaccctcaagagaacctcactacaaagacactcaa 10282040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 19588910 - 19589031
Alignment:
Q  61 caatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||    
T  19588910 caatgaatcctaagagaaaacacaaaaggaagatttttgatccttccaatggtgaaatctcactgcccaagatgtttacaatgtttcccaacccaagaga 19589009  T
Q  161 atctcactacaaatacactcaa 182  Q
      ||||||||||| ||||||||    
T  19589010 tcctcactacaaagacactcaa 19589031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 9353244 - 9353100
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| |||||    
T  9353244 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 9353146  T
Q  180 ------caaagttaactcctttgtaatccaagtttctttctcttca 219  Q
           ||||||| |||||||||||||||||||||| ||||||||    
T  9353145 taaccctaaagttacctcctttgtaatccaagtttctctctcttca 9353100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 7160836 - 7160715
Alignment:
Q  61 caatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||| |||  ||||||||    
T  7160836 caatgaatcctaagagaaaacataaaatgaagctttttgatccttccaatgatgaaatctcactgtccaaggtgattacaatgtttcccaatccaagaga 7160737  T
Q  161 atctcactacaaatacactcaa 182  Q
    | ||||||||||| ||||||||    
T  7160736 acctcactacaaagacactcaa 7160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 252
Target Start/End: Original strand, 15464719 - 15464896
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||| |||||    
T  15464719 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacgatgtttcccaacccaagagatcctcactacaaagacact 15464817  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcactta 252  Q
    |      ||||||  || ||||||||||||||||||| |||||||||| | |||| ||||| ||| |||| | ||||||    
T  15464818 caaccctaaagtttccttctttgtaatccaagtttctctctcttcaagctctcctccaaaatctgcacaagaacactta 15464896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 42127374 - 42127266
Alignment:
Q  30 tttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||| ||| ||| |||||||  ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  42127374 tttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactaccc 42127275  T
Q  129 aaggtgttt 137  Q
    |||||||||    
T  42127274 aaggtgttt 42127266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 335
Target Start/End: Complemental strand, 36932246 - 36932002
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||   |||||| ||| ||||||      ||||||      
T  36932246 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcatcactataaagacactcaaccctaaagttcc 36932147  T
Q  189 ctcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgat 288  Q
    |||||||| ||||||||||||| ||||||| || | |||| ||||||||| |||| | |||||| ||| || ||     |||  ||||||| | ||||||    
T  36932146 ctcctttgcaatccaagtttctctctcttc-agctctcctccaaaaactgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgat 36932048  T
Q  289 tgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |   |||||||||||||||||||   ||||||||||||||| |||||    
T  36932047 t-ttcaaattgtgtcacgattgatacgtacgacccaaggtacgacca 36932002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 42127268 - 42127147
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaa 188  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||  || |||||||||| ||||||||||| | ||||      |||||||     
T  42127268 ttttgatccttccaatggtgaaatctcactacccaaggtgtatacaatgtttctcaacccaagagaacctcactacaaagatactcaaccttaaagttac 42127169  T
Q  189 ctcctttgtaatccaagtttct 210  Q
    ||||||||||||||||||||||    
T  42127168 ctcctttgtaatccaagtttct 42127147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 3880432 - 3880588
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  |||||||| || |||| |||||| ||||||||||||||||||||||||||||||||||| ||    
T  3880432 atttctacccattttg-tgtcacccactctcacaatatgaatcctaggagaaaaaacaaaaggaagctttttgatccttccaatggtgaaatctcacaac 3880530  T
Q  127 ccaaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    |||| |||||||||||||||  || ||  |||||||| ||||||||||  ||||||||    
T  3880531 ccaatgtgtttacaatgtttctcaaccctcaagagaacctcactacaaggacactcaa 3880588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 38219603 - 38219728
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||| ||||||||      ||||  ||    
T  38219603 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 38219702  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  38219703 cctttgtaatccaagtttctctctct 38219728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 35387862 - 35387984
Alignment:
Q  94 tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--ttttccatcccaagagaatctcactacaaatacactcaa------agt 185  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||  ||| ||||||| ||||||||      |||    
T  35387862 ttttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaaccctagagt 35387961  T
Q  186 taactcctttgtaatccaagttt 208  Q
    |  ||||||||||||||||||||    
T  35387962 tccctcctttgtaatccaagttt 35387984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 2630375 - 2630460
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcacta 125  Q
    |||||| |||| || |||| |||||||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||| ||||||    
T  2630375 ttttcaagtcaccctcactcacaatgaatcctaagagaaaacactaaaggaagctttttgatcctttcaatggtgaaatttcacta 2630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 6741973 - 6742076
Alignment:
Q  18 aacaaaccctgatttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaa 116  Q
    |||||| ||| |||||||| |||||| || |||| |||||||  |||||||||||||||||||||||| |  ||| ||||||||| ||| ||||||||||    
T  6741973 aacaaaacctaatttctactcatttttcaagtcacccacactctcaatgaatcctaagaaaaaacacaga--gaatctttttgattctttcaatggtgaa 6742070  T
Q  117 atctca 122  Q
    ||||||    
T  6742071 atctca 6742076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 24136053 - 24136180
Alignment:
Q  99 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaac 189  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||  ||| |||||||||  ||  ||||||| ||||||||       |||  |    
T  24136053 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaaccctttggttccc 24136152  T
Q  190 tcctttgtaatccaagtttctttctctt 217  Q
    ||||||||||||||||||||| ||||||    
T  24136153 tcctttgtaatccaagtttctctctctt 24136180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 13488174 - 13488138
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13488174 acccaaggtgtttacaatgttttccaacccaagagaa 13488138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 33030905 - 33030770
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaa-----acacaaaatgaagctttttgatccttccaatggtgaaatctca 122  Q
    ||||||||||||||| || ||||  ||||||  ||||||||||||||| |||     |||| ||| ||||||||||| ||    ||||||||||||||||    
T  33030905 atttctacccatttttcaagtcactcacactctcaatgaatcctaagagaaattaaaacactaaaggaagctttttgttct---caatggtgaaatctca 33030809  T
Q  123 ctacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||||| || ||||||| |||  || ||||||||||    
T  33030808 ctacccaagatgattacaatatttctcaacccaagagaa 33030770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 33831651 - 33831615
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33831651 acccaaggtgtttacaatgttttccaacccaagagaa 33831615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 30900031 - 30900108
Alignment:
Q  60 acaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgttta 138  Q
    |||| |||||||| || ||||||| |||  ||||||||| ||||||||  |  ||||||||||||||||||||||||||    
T  30900031 acaaagaatccta-gagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttta 30900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 5611308 - 5611385
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    ||||| |||||||| ||||||| |||  ||||||||||||| || ||||  |||||||||| || | |||||||||||    
T  5611308 aatgattcctaagagaaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttac 5611385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 533740 - 533704
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  533740 acccaaggtgtttacaatgtttcccaacccaagagaa 533704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 5887613 - 5887649
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  5887613 acccaaggtgtttacaatgtttcccaacccaagagaa 5887649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 19806355 - 19806319
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  19806355 acccaaggtgtttacaatgtttcccaacccaagagaa 19806319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 62 - 335
Target Start/End: Complemental strand, 47923824 - 47923545
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  47923824 aatgaatcctacgagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 47923725  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
    |||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | |||||||||    
T  47923724 tctcactacaaagacactcaatcctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatat 47923625  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||      ||||||||||| |||||| ||| |||||| ||| ||||||||| | |||| |||||||||| |||||    
T  47923624 agcactcttcagttgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaacccaaggtacgacca 47923545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 40592736 - 40592423
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40592736 atttctacccattttg-tgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactac 40592638  T
Q  127 ccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaa 220  Q
    |||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||    
T  40592637 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaa 40592538  T
Q  221 gttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacga 320  Q
    | | || ||||||| ||| |||| | ||||||||||||  ||     |||||||||||| |||||| ||| |||||| ||| ||||||||  ||||||||    
T  40592537 gctctcattcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacga 40592438  T
Q  321 cccaaggtatgacca 335  Q
     |||||||| |||||    
T  40592437 tccaaggtacgacca 40592423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 29 - 335
Target Start/End: Original strand, 8126763 - 8127075
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  8126763 atttctacccatttttgtgtcacccacactctcaatgaatcttaagagaaaacacaaaaagaagctttttgatccttccaatgatgaaatctcactaccc 8126862  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| ||||||| || ||||||||||| ||||||      |||||||  | ||||||||||||||||||| |||||  ||      
T  8126863 aaggtgtttacaatgtttcccaacccaagaaaacctcactacaaagacactcaactgtaaagttactttctttgtaatccaagtttctctctctaaaaac 8126962  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacc 322  Q
    | |||||||||| ||| | | || ||||||||||||| ||    ||||||||||||| |||||| ||| |||||| ||| |||| |||  ||||||||||    
T  8126963 tctccttcaaaatctgcaaataaacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgacc 8127062  T
Q  323 caaggtatgacca 335  Q
    |||| || |||||    
T  8127063 caagatacgacca 8127075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 62 - 335
Target Start/End: Complemental strand, 1736224 - 1735945
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||     
T  1736224 aatgaatcctaagagaaaacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaatagat 1736125  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| |||||||||||||||||||||| ||||| |||  | |||||||||| ||| | || | |||||||||    
T  1736124 cctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctccaaactctccttcaaaatctgcataagaacacttatat 1736025  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     |||||||||||| |||||| ||| |||||| ||| ||||||||  | |||| |||||||||| |||||    
T  1736024 agcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgacca 1735945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 24695118 - 24694807
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  24695118 atttctacccattttg-tgtcacccacactctcaatgaatcctaaaagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcaccaccc 24695020  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||||||||||| ||||| ||||||||||     
T  24695019 aaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaaatttctctctcttcaagc 24694920  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacc 322  Q
    | | |||||||| ||| |||| | ||||||||||||| ||      ||||||||||| || ||| ||| |||||| ||| ||||||||  | |||| |||    
T  24694919 tcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaacc 24694820  T
Q  323 caaggtatgacca 335  Q
    ||||||| |||||    
T  24694819 caaggtacgacca 24694807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 39032472 - 39032197
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||    
T  39032472 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttaccaacccaagag-at 39032375  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | | |||||||||||| |||| | ||||||||||    
T  39032374 ctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctacttcaaaaactgcacaagaacacttatata 39032275  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||||||   ||||| ||| ||||||||  | ||||||||||||||| |||||    
T  39032274 gcaatcttcagctgtcaaaatcgtgtcacgatt-ttcaaatcgtggcacgattggtgcgtacgacccaaggtacgacca 39032197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 62 - 329
Target Start/End: Original strand, 48438382 - 48438654
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||     
T  48438382 aatgaatcctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttccca-accaagagat 48438480  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     || |||||||| ||||||      ||||||| |||||||||||||||||||||| ||| |||||| | ||||||||||  || |||| | |||||||||    
T  48438481 ccttactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctattcaagctctccttcaaaatttgcacaagaacacttatat 48438580  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggta 329  Q
    |||| ||     |||| ||||||| |||||| ||| |||||| ||| ||||||||  | |||||| ||||||||    
T  48438581 agcagtcttcggctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggta 48438654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 297
Target Start/End: Complemental strand, 25929349 - 25929075
Alignment:
Q  30 tttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaat--gaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||||||   ||||||||||||||||||| |||||||||||||||||||    
T  25929349 tttctactcattttcatgtcacccacactcacaatgaatcctaagagaaaacacaaaaaaagaagctttttgatccttccgatggtgaaatctcactacc 25929250  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaag 221  Q
    ||| ||||||||||||||||||| | |||||||| ||||||||||| ||||||      ||||||| ||||||||||||| |||||||| || ||||||     
T  25929249 caa-gtgtttacaatgttttccaactcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctcacttcaaa 25929151  T
Q  222 ttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaat 297  Q
     | | |||||||| ||  | | || ||||||||||| | ||     |||||||||||| |||||||||| ||||||    
T  25929150 ctctacttcaaaatctacaaagaaacacttatatagaaatcttcagctgtcaaaatcgtgtcacgattggccaaat 25929075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 3328311 - 3328117
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| |||||||  ||||| ||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  3328311 atttctacccatttttcatatcacccacactctcaatgtatcctaagagaaaacacaaaaggaagttttttgatccttccaatgctgaaatctcactacc 3328212  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||      ||||||| ||||||| |||||||||||||| |||||    
T  3328211 caaggtgtttacaatgttttccaacccaagagaagctcactacaaagacattcaaccctaaagttatctcctttctaatccaagtttctctctct 3328117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 335
Target Start/End: Original strand, 16264517 - 16264793
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||      
T  16264517 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 16264615  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    |||| |||||| ||||||      ||||||| |||||||||||||||||||||| |  ||||||| | |||||||||||||| |||| | ||||||||||    
T  16264616 ctcattacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctcttacttcaagctctccttcaaaaactgcacaagaacacttatata 16264715  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||  |||||| ||| ||||||||  | |||| |||||||||| |||||    
T  16264716 gcagtcttcagctgtcaaaatcgtgtcacgctt-tccaaatcgtggcacgattggtgcgtaccacccaaggtacgacca 16264793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 62 - 290
Target Start/End: Original strand, 21711389 - 21711621
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||     
T  21711389 aatgaatcctaagagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaagagat 21711487  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | | |||||||| ||| |||| | |||||| ||    
T  21711488 cctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctct-cttcaaaatctgcacaagaacacttacat 21711586  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattg 290  Q
    |||| || |  |||||| |||||| | ||||||||    
T  21711587 agcagtctgcaactgtccaaatcgtgacacgattg 21711621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 259
Target Start/End: Original strand, 36029261 - 36029462
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||      
T  36029261 atgaatcctaagagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 36029359  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||||||      ||| ||| |||||||||||||||||||||| |  ||||||| | |||||||||| ||| |||| | ||||||||||    
T  36029360 ctcactacaaagacactcaaccctaaatttacctcctttgtaatccaagtttctcttacttcaagctctccttcaaaatctgcacaagaacacttatata 36029459  T
Q  257 gca 259  Q
    |||    
T  36029460 gca 36029462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 3323645 - 3323459
Alignment:
Q  29 atttctacccatt-ttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||| ||||| ||| |||||||  |||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  3323645 atttctacccattgttcatatcacccacactctcaatgaattctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacc 3323546  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagttt 208  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| ||| ||||||      ||||||| ||||||||||||| ||||||    
T  3323545 caaggtgtttacaatgtttcccaacccaagagaacctcactataaagacactcaaccctaaagttacctcctttgtaatcgaagttt 3323459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 63 - 259
Target Start/End: Complemental strand, 8370407 - 8370206
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||      
T  8370407 atgaatcctaagagaaaacacaaaaggaaactttt-gatccttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatc 8370309  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | | |||||||| ||| |||| | | ||||||||    
T  8370308 ctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatctgcacaagaacgcttatata 8370209  T
Q  257 gca 259  Q
    |||    
T  8370208 gca 8370206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 256
Target Start/End: Complemental strand, 27974853 - 27974672
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||  ||||||||||| |||||    
T  27974853 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccgacccaagagatcctcactacaaagacact 27974755  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    |      ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | ||||||||||    
T  27974754 caaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatata 27974672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 335
Target Start/End: Complemental strand, 30709709 - 30709438
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||| ||||| |||     
T  30709709 aatgaatcctaagagaaaacacaaaaggaagctatttgatcattccaatgatgaaatctcactccccaaggtgtttacaatgtttcccaacccaaaagat 30709610  T
Q  162 tctcactacaaatacactcaaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcatt 261  Q
      ||   ||  | || || ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | ||||||||||||| |    
T  30709609 catcgacactca-actct-aaagttacctcctttgtaatccaagtttctgtctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagt 30709512  T
Q  262 caggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |     |||||||||||| |||||| ||  |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  30709511 cttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaaggtaagacca 30709438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 259
Target Start/End: Original strand, 35925601 - 35925849
Alignment:
Q  18 aacaaaccctgatttctacccattttcatgtcagccacacttaca--atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtga 115  Q
    |||||| ||| ||||||||||||||   ||||| |||| || |||  ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  35925601 aacaaaacctaatttctacccattt--gtgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagc-ttttgatccttccaatggtga 35925697  T
Q  116 aatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagtt--aactcctttgtaatccaagtt 207  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||  ||||||||||| ||| ||      ||||||  | |||||||||||||||||||    
T  35925698 aatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacattcaaccctaaagttacatctcctttgtaatccaagtt 35925797  T
Q  208 tctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    ||| || ||| ||| |  ||||||||||||| |||| | |||||||||||||    
T  35925798 tctctcactttaagctcaccttcaaaaactgcacaagaacacttatatagca 35925849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 25795914 - 25796068
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  25795914 atttctacccattttg-tgtcacccacactctcaatgaatcctaagagaaaacataaaaggaagctttttgatccttccaatggtgaaatctcactaccc 25796012  T
Q  129 aaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    |||||||||||| ||||| ||| ||  |||||||  ||||||||||| ||||||||    
T  25796013 aaggtgtttacattgtttcccaaccctcaagagagcctcactacaaagacactcaa 25796068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 1417445 - 1417259
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| |||||||  ||||||||||||||| |||||||||||  || ||||||||||||| |||||||||||||||||||||    
T  1417445 atttctacccatttttcatatcacccacactcccaatgaatcctaagagaaaacacaaaagaaaactttttgatcctttcaatggtgaaatctcactacc 1417346  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagttt 208  Q
     || ||||||||||||||| ||| ||||||| || ||||||||||| ||||||      ||||||| |||||||||||| |||||||    
T  1417345 taaagtgtttacaatgtttcccaacccaagataacctcactacaaagacactcaaccctaaagttacctcctttgtaattcaagttt 1417259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 37466460 - 37466621
Alignment:
Q  61 caatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    ||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||||||||||| |||||| ||||||||||||||| ||| || ||||||    
T  37466460 caatgaatcctaaaataaaacacaaaaggaagcttttcgatctttccaatggtgaaatctcacaacccaaagtgtttacaatgtttcccaacctaagaga 37466559  T
Q  161 atctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    | ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||    
T  37466560 acctcactacaaagacactcagctctaaagttacctcctttgtaatccaagtttctctctct 37466621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 18552837 - 18552721
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  18552837 atttctacccattttg-tgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactaccc 18552739  T
Q  129 aaggtgtttacaatgttt 146  Q
    ||||||||||||||||||    
T  18552738 aaggtgtttacaatgttt 18552721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 29 - 216
Target Start/End: Original strand, 26299121 - 26299314
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatg-aagctttttgatccttccaatggtgaaatctcactacc 127  Q
    |||||||||||||||  ||||| ||||| |  |||| |||||||||| ||||||||||| | ||||||||||||  ||||||||||||||||||||||||    
T  26299121 atttctacccattttg-tgtcacccacaatctcaattaatcctaagagaaaacacaaaaaggaagctttttgataattccaatggtgaaatctcactacc 26299219  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||| ||| |||||||||  ||||||||||| ||| ||      ||||||| ||||||| |||||||||||||| |||||    
T  26299220 caaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacattcaaccctaaagttacctcctttataatccaagtttctctctct 26299314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 3715921 - 3715800
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagaga 160  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||||||    
T  3715921 atgaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagaga 3715822  T
Q  161 atctcactacaaatacactcaa 182  Q
    | ||||||||||| ||| ||||    
T  3715821 acctcactacaaagacattcaa 3715800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 47649737 - 47649858
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagaga 160  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||  |||||||    
T  47649737 atgaatcctaagagaaaacacaaaaggaagctttttgatccttcaaatggtgaaatctaactacccaaggtgtttacaatgtttcccaaccctcaagaga 47649836  T
Q  161 atctcactacaaatacactcaa 182  Q
    | ||||||||||| ||||||||    
T  47649837 acctcactacaaagacactcaa 47649858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 27986357 - 27986214
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| |||||    
T  27986357 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 27986259  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttc 218  Q
    |      ||||||  |||||||||||||||||||||| |||||||    
T  27986258 caaccctaaagttccctcctttgtaatccaagtttctctctcttc 27986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 33386576 - 33386430
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||  ||||||||||| |||||    
T  33386576 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagacact 33386478  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaag 221  Q
    |      ||||||  |||||||||||||||||||||| ||||||||||    
T  33386477 caaccctaaagttctctcctttgtaatccaagtttctctctcttcaag 33386430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 286
Target Start/End: Complemental strand, 6794633 - 6794405
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| |||| |||||| ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||     
T  6794633 atgaaccctaagagaaaatacaaaaggaagctttt-gttcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagaac 6794535  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||  ||||||      ||||||| |||||||||||||||||||||| |||||  ||  | |||||||||| ||| | | || ||||||||||    
T  6794534 ctcactacaatgacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaacctctccttcaaaatctgcaaagaaacacttatata 6794435  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacg 286  Q
    | |  |||  || | |||||||||||||||    
T  6794434 gtacacagtgacagacaaaatcgcgtcacg 6794405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 252
Target Start/End: Original strand, 27453145 - 27453319
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatac--- 176  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| | ||       
T  27453145 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactacagacactca 27453243  T
Q  177 actc-aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcactta 252  Q
    || | ||||||  |||||||||||||||||||||| |||||||||| | | |||||||||||| |||| | ||||||    
T  27453244 accctaaagttccctcctttgtaatccaagtttctctctcttcaagctct-cttcaaaaactgcacaagaacactta 27453319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 32143522 - 32143653
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa------agttaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||||||||| ||||||||      ||||      
T  32143522 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcatcactacaaagacactcaaccctagagttcc 32143621  T
Q  189 ctcctttgtaatccaagtttctttctcttcaa 220  Q
    |||||||||||||||| ||||| |||||||||    
T  32143622 ctcctttgtaatccaaatttctctctcttcaa 32143653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 40844784 - 40844975
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtga-----aatctcac 123  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |     |||||||     
T  40844784 atttctacccattttg-tgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtcaggtcaaatctcat 40844882  T
Q  124 tacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttct 210  Q
    ||| |||||||||||||||||||  || ||||| |||  ||||||||||| ||||||      ||||||| ||||||||||||| ||||||||    
T  40844883 tactcaaggtgtttacaatgtttctcaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttct 40844975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 183
Target Start/End: Original strand, 21353694 - 21353852
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtga-aatctcactac 126  Q
    ||||||||||||||| |||| ||  ||||||||||||||||| ||||| ||||||| ||| ||| ||||| ||||||||||||||||| | |||||||||    
T  21353694 atttctacccatttttcatgccactcacacttacaatgaatcttaagagaaaacactaaaggaaacttttggatccttccaatggtgacattctcactac 21353793  T
Q  127 ccaaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaaa 183  Q
    |||| |||||||| |||||| ||| ||  |||||||| ||||||||||| |||||||||    
T  21353794 ccaaagtgtttacgatgtttcccaaccctcaagagaacctcactacaaagacactcaaa 21353852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 26928486 - 26928355
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa------agttaa 188  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||||      ||||      
T  26928486 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttcc 26928387  T
Q  189 ctcctttgtaatccaagtttctttctcttcaa 220  Q
    ||| |||||||||||||||| | |||||||||    
T  26928386 ctcgtttgtaatccaagtttttctctcttcaa 26928355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 259
Target Start/End: Original strand, 37725874 - 37726044
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaa 188  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||| ||  |||||||||  ||||||||||| ||||||      ||||||      
T  37725874 ttttgatcctttcaatggtgaaatctcactatccaaggtgtttataatgtttccccacccaagagatcctcactacaaagacactcaaccctaaagtttc 37725973  T
Q  189 ctcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |||||||||||||||||||||| |||||||||| |  | | ||||| ||| |||| | |||||||||||||    
T  37725974 ctcctttgtaatccaagtttctctctcttcaagctcacttccaaaatctgcacaagaacacttatatagca 37726044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 1306153 - 1306278
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||| ||||||||      ||||  ||    
T  1306153 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaactctagagttccct 1306252  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    ||||| |||||||||||||| |||||    
T  1306253 cctttataatccaagtttctctctct 1306278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 335
Target Start/End: Original strand, 27026925 - 27027150
Alignment:
Q  115 aaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagttt 208  Q
    |||||||||||||||||||||||||||||||| ||   ||||||||  |||| |||||| ||||||      ||||||| ||||||||||||||||||||    
T  27026925 aaatctcactacccaaggtgtttacaatgtttccctatccaagagatcctcagtacaaagacactcaaccctaaagttacctcctttgtaatccaagttt 27027024  T
Q  209 ctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgat 308  Q
     | |||||||||| | | |||||||| ||| |||| |  |||||||||||| ||     |||||||||||| |||||| ||  |||||  ||| ||||||    
T  27027025 ttctctcttcaagctcttcttcaaaatctgcacaagattacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttccaaaacgtggcacgat 27027123  T
Q  309 tgacgtgtacgacccaaggtatgacca 335  Q
    ||  | ||||||||||||||| |||||    
T  27027124 tggtgcgtacgacccaaggtacgacca 27027150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 27038270 - 27038420
Alignment:
Q  115 aaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagttt 208  Q
    ||||||||| |||||||||||||||||||||| ||  |||||||||  |||||||||||  |||||      ||||||| ||||||||||||||||||||    
T  27038270 aaatctcaccacccaaggtgtttacaatgtttccctacccaagagatcctcactacaaaggcactcaaccctaaagttatctcctttgtaatccaagttt 27038369  T
Q  209 ctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
     | |||||||||| | | |||||||| ||  |||| | |||||||||||||    
T  27038370 ttctctcttcaagctcttcttcaaaatctacacaagaacacttatatagca 27038420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 4386846 - 4386777
Alignment:
Q  113 tgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||| ||||||||||| ||||||||    
T  4386846 tgaaatctcactactcaaggtgattacaatgtttcccaacccaagagaacctcactacaaagacactcaa 4386777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 23410529 - 23410583
Alignment:
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  23410529 caaggtgtttacaatgttttccaacccaagagaacctcactacaaagacactcaa 23410583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 23392106 - 23392163
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||    
T  23392106 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaa 23392163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 5366244 - 5366154
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggt-gaaatctcactacccaaggtgtttac-aatgttttcca 150  Q
    |||||||||||||  ||||||| ||| ||| ||||| ||||||||||||  | ||||||| |||||||||||||||||| |||||||||||    
T  5366244 aatgaatcctaagcgaaaacactaaaggaaacttttcgatccttccaattattgaaatcttactacccaaggtgtttacaaatgttttcca 5366154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 335
Target Start/End: Complemental strand, 40734469 - 40734254
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttg-taatccaagtttctttctctt 217  Q
    |||||||||||||||||||||| ||| |||||||||| |||    |||| || |||      ||||||| |||||||| |  ||||||||||| ||||||    
T  40734469 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttatctcctttgattttccaagtttctgtctctt 40734371  T
Q  218 caagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgta 317  Q
    |||| | |||||||||| ||| | || | ||||||||||||| ||     |||||||||| | |||||| ||| |||||| ||| ||||||||| | |||    
T  40734370 caagctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttgtccaaatcgtgacacgattgatgcgta 40734272  T
Q  318 cgacccaaggtatgacca 335  Q
    ||| |||||||| |||||    
T  40734271 cgatccaaggtacgacca 40734254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 2671455 - 2671350
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttct 210  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||       |||  ||||||||||||||||||||||    
T  2671455 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttct 2671356  T
Q  211 ttctct 216  Q
     |||||    
T  2671355 ctctct 2671350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 9091170 - 9091065
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttct 210  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||       |||  ||||||||||||||||||||||    
T  9091170 ctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttct 9091071  T
Q  211 ttctct 216  Q
     |||||    
T  9091070 ctctct 9091065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 40372665 - 40372560
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttct 210  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||       |||  ||||||||||||||||||||||    
T  40372665 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttct 40372566  T
Q  211 ttctct 216  Q
     |||||    
T  40372565 ctctct 40372560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 8477592 - 8477657
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||    
T  8477592 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaa 8477657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 8738932 - 8738867
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||    
T  8738932 ctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaa 8738867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 21156595 - 21156672
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    ||||| |||||||| ||||||| |||  ||||||||||||| || ||||  |||||||||| || | |||||||||||    
T  21156595 aatgattcctaagagaaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttac 21156672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 5236653 - 5236689
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  5236653 acccaaggtgtttacaatgtttcccaacccaagagaa 5236689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 9581254 - 9581218
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  9581254 acccaaggtgtttacaatgtttcccaacccaagagaa 9581218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 19684086 - 19684122
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  19684086 acccaaggtgtttacaatgtttcccaacccaagagaa 19684122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 29682330 - 29682294
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  29682330 acccaaggtgtttacaatgtttcccaacccaagagaa 29682294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 32891074 - 32891038
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  32891074 acccaaggtgtttacaatgtttcccaccccaagagaa 32891038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 39153558 - 39153594
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  39153558 acccaaggtgtttacaatgtttcccaacccaagagaa 39153594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 44331516 - 44331480
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  44331516 acccaaggtgtttacaatgtttcccaacccaagagaa 44331480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 63 - 335
Target Start/End: Original strand, 5852 - 6130
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||      
T  5852 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatc 5951  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||||||      ||||||| |||||||||||||||| ||||| |||||||||| | |||||||||| ||| |||| | || |||||||    
T  5952 ctcactacaaagacactcaaccataaagttacctcctttgtaatccaattttctctctcttcaagctctccttcaaaatctgcacaagaacatttatata 6051  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||| |||||||||| ||||||||  | ||||||||||||||| |||||    
T  6052 gcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgacca 6130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 63 - 335
Target Start/End: Original strand, 2661 - 2938
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||      
T  2661 atgaatcctaagataaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacgcaaggtgtttacaatgtttcccaacccaagagatc 2760  T
Q  163 ctcactacaaatacact------caaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| | |||       ||||||| ||  |||||||||||| ||||| |||||||||| | |||||||||| ||| |||| | ||||||||||    
T  2761 ctcactacaaagaaacttaaccctaaagttaccttttttgtaatccaa-tttctctctcttcaagctctccttcaaaatctgcacaagaacacttatata 2859  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||| ||||||| |||||| ||| |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  2860 gcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 80 - 259
Target Start/End: Complemental strand, 133191 - 133007
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| | |||    
T  133191 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaact 133093  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |      ||||||  |||||||||||||||||||||| |||||| ||| | |||| |||||  || |||| | |||||||||||||    
T  133092 caaccctaaagttccctcctttgtaatccaagtttctctctctttaagctctcctccaaaatttgcacaagaacacttatatagca 133007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 63 - 335
Target Start/End: Original strand, 13598567 - 13598845
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||      
T  13598567 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatc 13598666  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||||||      ||||||| |||||||||||||||| ||||| |||||||||| | |||||||||| ||| |||| | || |||||||    
T  13598667 ctcactacaaagacactcaaccataaagttacctcctttgtaatccaattttctctctcttcaagctctccttcaaaatctgcacaagaacatttatata 13598766  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||| |||||||||| ||||||||  | ||||||||||||||| |||||    
T  13598767 gcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgacca 13598845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 62 - 335
Target Start/End: Original strand, 29651979 - 29652258
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||     
T  29651979 aatgaatcctaagagaaaacacaaaaggaaactttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagat 29652078  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| |||||||||||||||||||||| ||| |||||| | |||||||||| ||| |||||| |||||||||    
T  29652079 cctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcttttcaagctctccttcaaaatctgcacaaaaacacttatat 29652178  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     |||||||||||  |||||| ||| |||||| ||| ||||||||  ||||||||||||||||| |||||    
T  29652179 agcagtcttcagctgtcaaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaggtacgacca 29652258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 257
Target Start/End: Complemental strand, 47098789 - 47098555
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||||  ||| |||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47098789 atttctacccattttcacatcacccacactctcaatgaaacctaagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactaccc 47098690  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| |||||||||| ||| ||||||| ||||||      ||||||| |||||||||||||||||||||| |||||  |||     
T  47098689 aaggtgtttacaatgtttcccaacccaagagaacctcgctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagc 47098590  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatag 257  Q
    | || ||||||| ||| | | || |||||||||||    
T  47098589 tctcattcaaaatctgcaaagaaacacttatatag 47098555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 257
Target Start/End: Complemental strand, 47102792 - 47102569
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    ||||||| |||  ||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47102792 ttttcatatcactcacactctcaatgaatcctaagaaaaaacacaaaagaaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttac 47102693  T
Q  140 aatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaa 233  Q
    ||||||| ||| |||||||||| ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||  ||| | || ||||||    
T  47102692 aatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagctctcattcaaa 47102593  T
Q  234 aactgaacaaaagcacttatatag 257  Q
    | ||| | | || |||||||||||    
T  47102592 atctgcaaagaaacacttatatag 47102569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 335
Target Start/End: Original strand, 3281875 - 3282151
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||      
T  3281875 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 3281973  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||||||      ||||||| ||| |||||||||||||||||| || ||||||| | |||||||||| ||| | || | ||||||||||    
T  3281974 ctcactacaaagacactcaaccataaagttacctcatttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcataagaacacttatata 3282073  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||   ||||| ||| ||||||||  | |||||||||||||||||||||    
T  3282074 gcagtcttcagctgtcaaaatcgtgtcacg-tttttcaaatcgtggcacgattggtgcgtacgacccaaggtatgacca 3282151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 21536499 - 21536223
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||      
T  21536499 atgaaccctaagagaagacacaaaaggaagctttc-gatccttccaatggtgaaatcttactacccaaggtgtttacaatgttttccaacctaagagatc 21536401  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||||||||| ||||||      ||||||| |||||||||||||||||||||| || ||||||| | |||||||||| ||| |||| | ||||||||||    
T  21536400 ctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatata 21536301  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||  |||||| | | ||||||||  | ||||||||||||||| |||||    
T  21536300 gcagtcttcagctgtcaaaatcgtgtcacg-ttttccaaatcggggcacgattggtgcgtacgacccaaggtacgacca 21536223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 40816763 - 40816625
Alignment:
Q  46 tgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtt 145  Q
    ||||| |||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40816763 tgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtt 40816664  T
Q  146 ttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    | ||| ||  |||||||| ||||||||||| ||||||||    
T  40816663 tcccaaccctcaagagaacctcactacaaagacactcaa 40816625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 80 - 335
Target Start/End: Original strand, 37069952 - 37070212
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| ||| |||||||||  ||||||||||| |||||    
T  37069952 acacaaaaggaagctttt-gatccttccaatggtgaaatctcattatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 37070050  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtca 273  Q
    |      ||||||| |||||||||||||||||||||| ||||||| || | | |||||||| ||| |||| | ||||||||||||| ||     ||||||    
T  37070051 caaccataaagttacctcctttgtaatccaagtttctctctcttccagctctacttcaaaatctgcacaagaacacttatatagcagtctttagctgtca 37070150  T
Q  274 aaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||||   |||||||||  |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  37070151 aaattatgtcacgattttccaaatcgtggcacgattggtgcgtacgacccaaggtacgacca 37070212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 216
Target Start/End: Original strand, 32889572 - 32889764
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| |||||||  ||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  32889572 atttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacacaaaa-gaagctttt-gaaccttccaatggtgaaatctcactacc 32889669  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||| ||| ||||| | || ||||||||||| ||||||      ||||||| |||||||| ||||||||||||| |||||    
T  32889670 caaggtgtttacaatgtttcccaacccaaaaaaacctcactacaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctct 32889764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 335
Target Start/End: Original strand, 22819573 - 22819875
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaaga--aaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgttt 137  Q
    |||||| |||| |||||||  |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22819573 ttttcaagtcacccacactctcaatgaatcctaagagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatgtaactacccaaggtgttt 22819672  T
Q  138 acaatgttttccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatcc-aagtttctttctcttcaagttatccttc 230  Q
    ||||||||| ||| |||||||||| ||||||||||| ||||| ||      ||||| ||||||||||| || ||||||||  ||||||||  | ||||||    
T  22819673 acaatgtttcccaacccaagagaacctcactacaaagacactaaatcctaaagttacctcctttgtaaacccaagtttct--ctcttcaaactctccttc 22819770  T
Q  231 aaaaactgaacaaaagcacttatatag---cattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaagg 327  Q
    ||||  |||||| || |||||| || |   |||  ||   || ||||||||| |||||||||| | ||||||||| ||| | || | |||||||||||||    
T  22819771 aaaatttgaacagaaacacttaaattgtaccatatag---ctatcaaaatcgtgtcacgattggcaaaattgtgttacggtcgatgcgtacgacccaagg 22819867  T
Q  328 tatgacca 335  Q
    || |||||    
T  22819868 tacgacca 22819875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 64 - 216
Target Start/End: Original strand, 9476430 - 9476588
Alignment:
Q  64 tgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatc 163  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| || ||||||| |    
T  9476430 tgaatcttaagagaaaacacaaaaggaagctttttgatccttcaaatggtgaaatctcactacccaagatgtttacaatgtttcccaaccaaagagaacc 9476529  T
Q  164 tcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    |||||||||| ||| ||      ||||||| |||||||||||||||||||||| |||||    
T  9476530 tcactacaaagacattcaacccaaaagttacctcctttgtaatccaagtttctctctct 9476588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 16124445 - 16124347
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  16124445 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagaga 16124347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 9022858 - 9022652
Alignment:
Q  39 attttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgttta 138  Q
    ||||||| |||| ||||||| |||||||||||||||| ||||| |||   |||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  9022858 attttcaagtcaaccacactcacaatgaatcctaagagaaaactcaag--gaagcttttttatccttccaatggtgaaatctcactacgaaaggtgttta 9022761  T
Q  139 caatgttttccatcccaagagaatctcactacaaatacactc-----aaagttaactcctttgt-aatccaagtttctttctcttcaagttatccttcaa 232  Q
    ||||||||  || |||||||||| ||||||||||| ||| ||     |||| || ||||||||| || |||||||||| |||||||||| | ||||||||    
T  9022760 caatgtttctcaacccaagagaacctcactacaaagacattcaaccaaaagatacctcctttgtaaacccaagtttctctctcttcaagctctccttcaa 9022661  T
Q  233 aaactgaac 241  Q
    || ||||||    
T  9022660 aatctgaac 9022652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 19073094 - 19073216
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagag 159  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||    
T  19073094 aatgaaccctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagag 19073193  T
Q  160 aatctcactacaaatacactcaa 182  Q
    || ||||||||||| ||||||||    
T  19073194 aacctcactacaaagacactcaa 19073216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 19120984 - 19121106
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagag 159  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||    
T  19120984 aatgaaccctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagag 19121083  T
Q  160 aatctcactacaaatacactcaa 182  Q
    || ||||||||||| ||||||||    
T  19121084 aacctcactacaaagacactcaa 19121106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 27104330 - 27104173
Alignment:
Q  64 tgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatc 163  Q
    |||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||||| | |    
T  27104330 tgaatcttaagagaaaacacaaaaggaagctttttgattcttccaatggtgaaatctcactacccaaggtgcttataatgtttcccaacccaagag-acc 27104232  T
Q  164 tcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    |||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||    
T  27104231 tcactacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctct 27104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 80 - 259
Target Start/End: Complemental strand, 13604534 - 13604350
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| | |||    
T  13604534 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagatact 13604436  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |      ||||||  |||||||||||||||||||||| |||||| ||| | |||| |||||  || |||| | |||||||||||||    
T  13604435 caaccctaaagttccctcctttgtaatccaagtttctctctctttaagctctcctccaaaatttgcacaagaacacttatatagca 13604350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 47703900 - 47703744
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||||| ||||||||||| |||| ||||| ||| |||||||||||||||||||||||    
T  47703900 atttctacccattttg-tgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagtttttttatcattccaatggtgaaatctcactac 47703802  T
Q  127 ccaaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||| ||| ||  |||||||| ||||||||||| ||||||||    
T  47703801 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaa 47703744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 63 - 259
Target Start/End: Complemental strand, 26644827 - 26644625
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||      
T  26644827 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaaaagatc 26644729  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatcc-ttcaaaaactgaacaaaagcacttatat 255  Q
     |||||||||| ||||||      ||| ||| |||||||||||||||||||||| |||||||| | | ||| ||||||| ||| | || | |||||||||    
T  26644728 ttcactacaaagacactcaaccctaaaattatctcctttgtaatccaagtttctctctcttcaggctctcctttcaaaatctgcataagaacacttatat 26644629  T
Q  256 agca 259  Q
    ||||    
T  26644628 agca 26644625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 19358735 - 19358611
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt-ccatcccaagagaatctcactacaaatacactcaa------agttaactc 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||  ||||||||||| ||||||||      ||||  |||    
T  19358735 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaaaagatcctcactacaaagacactcaaccctagagttccctc 19358636  T
Q  192 ctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||| |||||    
T  19358635 ctttgtaatccaagtttctctctct 19358611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 19361324 - 19361200
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt-ccatcccaagagaatctcactacaaatacactcaa------agttaactc 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||||      ||||  |||    
T  19361324 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctc 19361225  T
Q  192 ctttgtaatccaagtttctttctct 216  Q
    |||||||||| |||||||| |||||    
T  19361224 ctttgtaatctaagtttctctctct 19361200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 19366200 - 19366075
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  ||| |||||||||  ||||||||||| ||||||||      ||||  ||    
T  19366200 gatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 19366101  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  19366100 cctttgtaatccaagtttctctctct 19366075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 24202661 - 24202536
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactc------aaagttaact 190  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||      ||||||  ||    
T  24202661 gatccttccaatggtgagatctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccct 24202562  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  24202561 cctttgtaatccaagtttctctctct 24202536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 11031427 - 11031306
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaaga-aaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgttta 138  Q
    |||||| ||||  |||||| |||||| ||||||||| |||||||| ||| ||||||||||||||||||||||  ||||  ||||||||||| ||||||||    
T  11031427 ttttcaagtcattcacactcacaatgtatcctaagagaaaaacactaaaggaagctttttgatccttccaataatgaa--ctcactacccacggtgttta 11031330  T
Q  139 c-aatgttttccatcccaagagaa 161  Q
    | ||||||| ||| ||||||||||    
T  11031329 caaatgtttcccaacccaagagaa 11031306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 19379964 - 19379916
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19379964 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt 19379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 8281477 - 8281563
Alignment:
Q  55 cacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 141  Q
    |||| ||||||||||| |||| ||||||| ||| |||| ||||| || |||||  |  ||| |||||||||||||||||||||||||    
T  8281477 cactcacaatgaatccaaagagaaaacactaaaggaagtttttttattcttcctctaatgagatctcactacccaaggtgtttacaa 8281563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 35109513 - 35109423
Alignment:
Q  18 aacaaaccctgatttctaccca-ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttcc 107  Q
    |||||||| | ||||||||||| |||||| ||||  |||||| ||||||||||||| || |||| || ||| |||||||||| ||||||||    
T  35109513 aacaaaccttaatttctacccaattttcaagtcacacacactcacaatgaatcctacgagaaaatactaaaggaagcttttttatccttcc 35109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 335
Target Start/End: Complemental strand, 49918238 - 49918105
Alignment:
Q  201 ccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgt 300  Q
    |||||||||| |||||||||| | | |||||||| ||| | | || ||||||||||||| ||     |||||||||||| |||||  ||  |||||| ||    
T  49918238 ccaagtttctctctcttcaagctctacttcaaaatctgcaaagaa-cacttatatagcagtcttcagctgtcaaaatcgtgtcacattttcccaaatcgt 49918140  T
Q  301 gtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    | ||||||||  |||||||||||||||||||||||    
T  49918139 gacacgattggtgtgtacgacccaaggtatgacca 49918105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 32736972 - 32736908
Alignment:
Q  18 aacaaaccctgatttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaac 81  Q
    |||||||||| ||||||||||||||| || |||| | ||||| |||||||||||||||| |||||    
T  32736972 aacaaaccctaatttctacccatttttcaagtcatcgacactcacaatgaatcctaagagaaaac 32736908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 46064889 - 46064853
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||||||| ||||||||||    
T  46064889 acccaaggtgtttacaatgttttccaccccaagagaa 46064853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 3189151 - 3189114
Alignment:
Q  292 ccaaattgtgtcacgattgacgtgtacgacccaaggta 329  Q
    |||||||||||||||||||| | |||||||||||||||    
T  3189151 ccaaattgtgtcacgattgatgcgtacgacccaaggta 3189114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 3197968 - 3197931
Alignment:
Q  292 ccaaattgtgtcacgattgacgtgtacgacccaaggta 329  Q
    |||||||||||||||||||| | |||||||||||||||    
T  3197968 ccaaattgtgtcacgattgatgcgtacgacccaaggta 3197931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 3206786 - 3206749
Alignment:
Q  292 ccaaattgtgtcacgattgacgtgtacgacccaaggta 329  Q
    |||||||||||||||||||| | |||||||||||||||    
T  3206786 ccaaattgtgtcacgattgatgcgtacgacccaaggta 3206749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 197105 - 197141
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  197105 acccaaggtgtttacaatgtttcccaacccaagagaa 197141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 834364 - 834400
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  834364 acccaaggtgtttacaatgtttcccaacccaagagaa 834400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 3847318 - 3847354
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  3847318 acccaaggtgtttacaatgtttcccaacccaagagaa 3847354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 10925194 - 10925158
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  10925194 acccaaggtgtttacaatgtttcccaacccaagagaa 10925158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 13138171 - 13138207
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  13138171 acccaaggtgtttacaatgtttcccaccccaagagaa 13138207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 16455456 - 16455408
Alignment:
Q  281 gtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggta 329  Q
    |||||||||| |||||| |||||||| |||| | |||||||||||||||    
T  16455456 gtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggta 16455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 23555462 - 23555498
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  23555462 acccaaggtgtttacaatgtttcccaacccaagagaa 23555498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 30476645 - 30476681
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  30476645 acccaaggtgtttacaatgtttcccaacccaagagaa 30476681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 50167372 - 50167408
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  50167372 acccaaggtgtttacaatgtttcccaacccaagagaa 50167408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 62 - 335
Target Start/End: Original strand, 21630111 - 21630390
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  21630111 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 21630210  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| |||||||||||||||||||||| || ||||||| | |||||||||| ||  |||| | |||||||||    
T  21630211 cctcactacaaagacactcaacactaaagttacctcctttgtaatccaagtttctctcccttcaagctctccttcaaaatctacacaagaacacttatat 21630310  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     |||||||||||| |||||| ||| |||||| ||| ||||||||  ||||||||||||| ||| |||||    
T  21630311 agcagtctttagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaagtacgacca 21630390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 62 - 329
Target Start/End: Complemental strand, 33528555 - 33528282
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||     
T  33528555 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaatgtgtttacaatgtttcccaacccaagagat 33528456  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | |||||||||    
T  33528455 cctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatat 33528356  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggta 329  Q
    |||| ||      ||| ||||||| |||||| ||| |||||| ||| ||||||||  | |||||||||||||||    
T  33528355 agcagtcttcagttgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggta 33528282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 335
Target Start/End: Original strand, 34388983 - 34389295
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34388983 atttctacccattttg-tgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactac 34389081  T
Q  127 ccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaa 220  Q
    |||||||||||||||||||| ||| |||||||||  ||||||||||| |||| |      ||||||| |||||||||||||||||||||| || | ||||    
T  34389082 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacacaaccctaaagttacctcctttgtaatccaagtttctctcacatcaa 34389181  T
Q  221 gttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacga 320  Q
    | | |||||||||| ||| |||| | ||||||||||||| ||     |||||||||||| |||||| ||  |||||| ||| ||||||||  | ||||||    
T  34389182 gctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttccaaatcgtgacacgattggtgcgtacga 34389280  T
Q  321 cccaaggtatgacca 335  Q
    ||||||||| |||||    
T  34389281 cccaaggtacgacca 34389295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 14698972 - 14698661
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  14698972 atttctacccattttg-tgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatagtgaaatctcactaccc 14698874  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| ||| |||||  ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||  |||     
T  14698873 aaggtgtttacaatgtttcccaacccgagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagc 14698774  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacc 322  Q
    | |||||||||| ||  |||| | ||||||||||||| ||    ||| ||||||||| |||||| ||| |||||| |||  | | |||  | ||||||||    
T  14698773 tctccttcaaaatctacacaagaacacttatatagcagtcttcaactatcaaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgacc 14698674  T
Q  323 caaggtatgacca 335  Q
    ||||||| |||||    
T  14698673 caaggtacgacca 14698661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 29 - 329
Target Start/End: Original strand, 33118269 - 33118574
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| || ||||  ||||||||| ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33118269 atttctacccattttg-tgtcaccctcactctcaatgaatcttaagagaaaacacaaaaggaagctttttgatccttccaatggcgaaatctcactaccc 33118367  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||  ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||  |||     
T  33118368 aaggtgtttacaatgttccccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagc 33118467  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacc 322  Q
    | | |||||||| ||| |||| | ||||||||||||| ||      ||||||||||| |||| | ||| |||||| ||| ||||||||  | ||||||||    
T  33118468 tcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgacc 33118567  T
Q  323 caaggta 329  Q
    |||||||    
T  33118568 caaggta 33118574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 62 - 335
Target Start/End: Original strand, 20522388 - 20522667
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| || ||| |||||||||     
T  20522388 aatgagtcctaagaaaaaacacaaaaggaagctttttgatcattcaaatggtgaaatctcactacccaagttgtttacaatgcttcccaacccaagagat 20522487  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| ||||||||||||| |||||||| ||||| |||| |  ||||||||| ||| | || | ||||| |||    
T  20522488 actcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctctctccaagctcaccttcaaaatctgcagaagaacacttttat 20522587  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| |      |||||||||||| |||||| ||| |||||||||| ||||||||  | ||||||||||||||| |||||    
T  20522588 agcagtttttagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgacca 20522667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 40015058 - 40015292
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||| ||||||||||||| |||||||  |||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  40015058 atttctactcattttcatgtcacccacactctcaataaatcctaagaaaaatcacaaaaggaagctttttgatccttccaatggtgaaatctcactatcc 40015157  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatcc-aagtttctttctcttcaag 221  Q
    || ||||||||||||||| ||| |||||||||| |||| |||||| ||||||      ||||||| ||||||||||| || || ||||| ||||||||||    
T  40015158 aatgtgtttacaatgtttcccaacccaagagaacctcaatacaaa-acactcaaccctaaagttacctcctttgtaaacctaaatttctctctcttcaag 40015256  T
Q  222 ttatccttcaaaaactgaacaaaagcacttatatag 257  Q
     | | |||||||| ||||||| || |||||| ||||    
T  40015257 ctctacttcaaaatctgaacagaaacacttaaatag 40015292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 23078400 - 23078124
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |    
T  23078400 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatt 23078302  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||||  ||||| ||||||      ||||||| |||||||||||||||||||||| || ||||||| | |||||||||| ||| |||| | ||||||||||    
T  23078301 ctcatcacaaagacactcaacccaaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatata 23078202  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||    ||||||||||| | |||||| ||  |||||| ||| ||||||||  | |||||||||||| || |||||    
T  23078201 gcagtcttcaactgtcaaaattgtgtcacg-ttttccaaatcgtggcacgattggtgcgtacgacccaagatacgacca 23078124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 10707182 - 10706905
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  || |||||||||      
T  10707182 atgaatcctaagagaaaacacaaaaggaagctttttgatccttctaatggtgaaatctaactacccaaggtgtttacaatgtttctcaacccaagagatc 10707083  T
Q  163 ctcactaca-----aatacactc-aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    |||||||||     |||| || | ||||||| ||||||||||||| |||||||| ||||||| || | | |||||||| ||| |||| | ||||||||||    
T  10707082 ctcactacaaagataataaaccctaaagttacctcctttgtaatctaagtttctctctcttccagctcttcttcaaaatctgcacaagaacacttatata 10706983  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||  |||||  ||| ||||||||  ||||||||||||||||| |||||    
T  10706982 gcagtcttcagctgtcaaaatcgtgtcacg-ttttccaaaccgtggcacgattggtgtgtacgacccaaggtacgacca 10706905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 31056177 - 31056331
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  31056177 atttctacccattttg-tgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatcctttcaatggtgaaatctcactaccc 31056275  T
Q  129 aaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||| ||| ||  |||||||| ||||||||||| ||||||||    
T  31056276 aaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaa 31056331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 62 - 259
Target Start/End: Original strand, 17865371 - 17865573
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  17865371 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttctatttgtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 17865470  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
      |||||||||| ||||||      ||||||| ||||||||||||||||| |||| |||||||||| | | ||||||||  || |||| | |||||||||    
T  17865471 cttcactacaaagacactcaaccctaaagttacctcctttgtaatccaag-ttctgtctcttcaagctcttcttcaaaatttgcacaagaacacttatat 17865569  T
Q  256 agca 259  Q
    ||||    
T  17865570 agca 17865573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 36757674 - 36757460
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| |||||    
T  36757674 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 36757576  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtca 273  Q
    |      ||||||| |||||||||||| ||||||||| || ||||||| | |||||||||| ||| |||| | |||||||||| || ||     ||||||    
T  36757575 caaccctaaagttacctcctttgtaattcaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatataacagtcttcagctgtca 36757476  T
Q  274 aaatcgcgtcacgatt 289  Q
    |||||| |||||||||    
T  36757475 aaatcgtgtcacgatt 36757460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 2869657 - 2869503
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| || |||| |||||||  ||||||||||||||| ||||||| ||  ||||||||||||| |||||||||| ||||||||||||||    
T  2869657 atttctacccatttttcaagtcacccacactctcaatgaatcctaagagaaaacactaacggaagctttttgattcttccaatggcgaaatctcactacc 2869558  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    ||| ||||||||||||||||||| | |||||||| ||||||||||| ||||||||    
T  2869557 caatgtgtttacaatgttttccaactcaagagaacctcactacaaagacactcaa 2869503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 63 - 257
Target Start/End: Original strand, 13569496 - 13569697
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||      
T  13569496 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttataatgtttcccaacccaagagatc 13569595  T
Q  163 ctcactacaaatacact------caaagttaactcctttgtaatccaagtttctttctct-tcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
    ||||||||||| |||||       ||||||| ||| |||||||||||||||||| |||||  |||| | ||||| |||| ||| |||| | |||||||||    
T  13569596 ctcactacaaagacacttaaccctaaagttatctcatttgtaatccaagtttctctctctcccaagctctcctttaaaatctgcacaagaacacttatat 13569695  T
Q  256 ag 257  Q
    ||    
T  13569696 ag 13569697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 259
Target Start/End: Complemental strand, 28259089 - 28258905
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||  ||||||| ||| |||||    
T  28259089 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatcctcactataaagacact 28258991  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |      ||||||| |||||||||||||||||||||| |||||||||| | | |||||||| ||  |||| | |||||||||||||    
T  28258990 caaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatctacacaagaacacttatatagca 28258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 10445379 - 10445238
Alignment:
Q  81 cacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc 180  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||| ||| ||    
T  10445379 cacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccgagagaacctcactacaaagacattc 10445280  T
Q  181 ------aaagttaactcctttgtaatccaagtttctttctct 216  Q
          ||||||| ||||||||||||| |||||||| |||||    
T  10445279 aaccctaaagttacctcctttgtaatctaagtttctctctct 10445238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 39483064 - 39483219
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat---gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcacta 125  Q
    ||||||||||||||| |||||| |||||||  ||||   ||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  39483064 atttctacccatttt-atgtcacccacactctcaataatgaatcctaagagaaaacacaaaaggaagttttttgatcattccaatggtgaaatctcacta 39483162  T
Q  126 cccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||| ||| ||| |||||||||  ||||| ||||| ||||||||    
T  39483163 cccaaggtgtttacaatatttcccaacccaagagatcctcacaacaaagacactcaa 39483219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 8040195 - 8040352
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaaga-aaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcacta 125  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  8040195 atttctacccattttg-tgtcacccactctcacaatatgaatcctaagagaaaaacataaaaggaagctttttgatccttccaatggtgaaatctcacta 8040293  T
Q  126 cccaaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||||||| ||| ||  ||||||||  |||||||||| ||||||||    
T  8040294 cccaaggtgtttacaatgtttcccaaccctcaagagaacttcactacaaagacactcaa 8040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 8390114 - 8389918
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||||| ||||||||| | ||||||||||||| ||||||||||| |||||||||||     
T  8390114 atttctacccattttg-tgtcacccactctcacaatatgaatcctaagagaaaacacaagaggaagctttttgattcttccaatggtaaaatctcactat 8390016  T
Q  127 ccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttc 218  Q
    |||||||||||||||||||| | | |||||||||   |||||||||| || |||      ||||||| |||||||||||||||||||||| |||||||    
T  8390015 ccaaggtgtttacaatgtttcctaacccaagagatcatcactacaaagaccctcaaccctaaagttatctcctttgtaatccaagtttctctctcttc 8389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 34682298 - 34682142
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaa--tgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || ||||  |||||||||||| ||||||||||| ||| | |||||||||||| | |||||||||||||||||    
T  34682298 atttctacccattttg-tgtcacccactctcacaaggtgaatcctaagagaaaacacaaaaggaaacattttgatccttcaagtggtgaaatctcactac 34682200  T
Q  127 ccaaggtgtttacaatgttttcca--tcccaagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||||||||||  || |||||||| ||||||||||| ||||||||    
T  34682199 ccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagacactcaa 34682142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 15903855 - 15903701
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| || |||| |||||||  |||||||||||| || |||||||||||  || |||||| ||| ||||||||||||||||||| || |    
T  15903855 atttctacccatttttcaagtcacccacactctcaatgaatcctatgagaaaacacaaaagaaatcttttttatcattccaatggtgaaatctcattatc 15903756  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    ||| ||||||||||||||| | | |||||||||| ||||||||||| ||| ||||    
T  15903755 caatgtgtttacaatgtttcctaacccaagagaacctcactacaaagacattcaa 15903701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 40739033 - 40739154
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa------agttaa 188  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||||      ||||      
T  40739033 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttcc 40739132  T
Q  189 ctcctttgtaatccaagtttct 210  Q
    ||||||||||||||||||||||    
T  40739133 ctcctttgtaatccaagtttct 40739154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 2837983 - 2837838
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaa-tctcactacccaaggtgttta 138  Q
    ||||||||||| ||||  |  ||||||||||||||| ||||||| ||| |||  ||||| |||||||||||||||||| |||||||| ||||||||||||    
T  2837983 ttttcatgtcacccaccttctcaatgaatcctaagagaaaacactaaaggaatattttttatccttccaatggtgaaattctcactatccaaggtgttta 2837884  T
Q  139 caatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    |||||||| ||| ||  |||||||| ||||||||||| ||||||||    
T  2837883 caatgtttcccaaccctcaagagaacctcactacaaagacactcaa 2837838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 35397654 - 35397795
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    |||||| |||| ||||| |  ||||||||||||||| |||| ||||  ||||| || |||||||||||||||||||||||||||||||||||||  ||||    
T  35397654 ttttcaagtcacccacaatctcaatgaatcctaagagaaaatacaatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtaattac 35397752  T
Q  140 aatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    ||||||||||| ||||  |||| ||||||||||| ||| ||||    
T  35397753 aatgttttccaacccagaagaacctcactacaaagacaatcaa 35397795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 3491955 - 3492080
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--ttttccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||  ||||||||||| ||||||||      | ||  ||    
T  3491955 gatccttccaatggtggaatctcactacccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaaccctagatttccct 3492054  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  3492055 cctttgtaatccaagtttctctctct 3492080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 3278157 - 3278270
Alignment:
Q  53 cacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgttttccat 151  Q
    |||||| |||||||| ||||||| ||||| | ||| |||| |||||||||| ||| ||  ||||||||||||| ||||||||||||| |||||||||||     
T  3278157 cacactcacaatgaaccctaagagaaaacgctaaaggaagttttttgatccgtcctataatgaaatctcactatccaaggtgtttacaaatgttttccaa 3278256  T
Q  152 cccaagagaatctc 165  Q
    ||||||||||||||    
T  3278257 cccaagagaatctc 3278270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 25409842 - 25409919
Alignment:
Q  107 caatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||| ||||||| ||||||||    
T  25409842 caatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaa 25409919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 28770750 - 28770616
Alignment:
Q  18 aacaaaccctgatttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaa 116  Q
    ||||||| || ||||||||||||||| || ||||  ||||||  ||||||||||||||| ||||||| ||| ||| |||||| |||||||   |  |||     
T  28770750 aacaaactctaatttctacccatttttcaagtcatacacactcgcaatgaatcctaagagaaaacactaaaggaaacttttttatccttcagctaatgag 28770651  T
Q  117 atctcactacccaaggtgtttac-aatgttttcca 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  28770650 atctcactacccaaggtgtttacaaatgttttcca 28770616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 1344435 - 1344355
Alignment:
Q  104 ttccaatggtgaaat-ctcactacccaaggtgtttacaatgttttccatcc-caagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||| ||| || |||||||| ||||||||||| ||||||||    
T  1344435 ttccaatggtgaaattctcactaccgaagatgtttacaatgtttcccaacctcaagagaacctcactacaaagacactcaa 1344355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 18674377 - 18674235
Alignment:
Q  18 aacaaaccctgatttctacccatttt-catgtcagccacacttacaa-tgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtga 115  Q
    |||||||| | ||||||| ||||||| || |||| ||||||| | || |||||| ||||| ||||||  ||| ||||||||||||||||| ||||  |||    
T  18674377 aacaaaccataatttctatccatttttcaagtcacccacactcataaatgaatcataagagaaaacattaaaggaagctttttgatcctt-caataatga 18674279  T
Q  116 aatctcactacccaaggtgtttac-aatgttttccatcccaaga 158  Q
    ||||||||| | |||||||||||| ||||||| ||| |||||||    
T  18674278 aatctcactgctcaaggtgtttacgaatgtttcccaacccaaga 18674235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 41586429 - 41586361
Alignment:
Q  115 aaatctcactacccaaggtgtttacaa-tgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||| |  |||| ||||||||    
T  41586429 aaatctcactacccaaggtgtttacaactgttttccaacccaagagaagctctcaccaaagacactcaa 41586361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 9296292 - 9296243
Alignment:
Q  99 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttt 147  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  9296292 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttt 9296243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 2334786 - 2334829
Alignment:
Q  292 ccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||    
T  2334786 ccaaatcgtgtcacgattgatgtgtacgacccaaggtacgacca 2334829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 11098796 - 11098691
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttct 210  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||       |||  ||||||||||||||||||||||    
T  11098796 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttct 11098697  T
Q  211 ttctct 216  Q
     |||||    
T  11098696 ctctct 11098691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 11151788 - 11151824
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  11151788 acccaaggtgtttacaatgtttcccaacccaagagaa 11151824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 11690472 - 11690436
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  11690472 acccaaggtgtttacaatgtttcccaacccaagagaa 11690436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 14202604 - 14202640
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  14202604 acccaaggtgtttacaatgtttcccaacccaagagaa 14202640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 29867840 - 29867804
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  29867840 acccaaggtgtttacaatgtttcccaacccaagagaa 29867804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 34139968 - 34140004
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  34139968 acccaaggtgtttacaatgtttcccaacccaagagaa 34140004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 36773533 - 36773497
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  36773533 acccaaggtgtttacaatgtttcccaacccaagagaa 36773497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 39284856 - 39284820
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  39284856 acccaaggtgtttacaatgtttcccaacccaagagaa 39284820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 42362323 - 42362287
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  42362323 acccaaggtgtttacaatgtttcccaacccaagagaa 42362287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 24435935 - 24435624
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    ||||||||||||||| || ||| ||||| | | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24435935 atttctacccatttttatatcacccacattcataatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactaccc 24435836  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| | |||||||| ||||| ||||| ||||||      ||||||| |||||||||||||| ||||||| ||||||||||     
T  24435835 aaggtgtttacaatgtttcccaactcaagagaacctcac-acaaagacactcaaccctaaagttatctcctttgtaatcctagtttctctctcttcaagc 24435737  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacc 322  Q
    ||| ||||||||  || | | || ||||||||||||| ||    ||||||||| ||| |||||||||| |||||| ||| |||| |||  | |||| |||    
T  24435736 tattcttcaaaatttgcaaacaaacacttatatagcagtcttcaactgtcaaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacc 24435637  T
Q  323 caaggtatgacca 335  Q
    ||||||| |||||    
T  24435636 caaggtacgacca 24435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 31936698 - 31936901
Alignment:
Q  18 aacaaaccctgatttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaa 116  Q
    |||||| ||| ||||||||||||||| ||| ||| |||||||  ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  31936698 aacaaatcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacacaaa--gaagctttttgatccttccaatggtgaa 31936795  T
Q  117 atctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttct 210  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||  ||||||||||| ||||||      ||||||| |||||||| |||||||||||||    
T  31936796 atctcactacccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaagtttct 31936895  T
Q  211 ttctct 216  Q
     |||||    
T  31936896 ctctct 31936901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 216
Target Start/End: Original strand, 31979646 - 31979838
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  31979646 atttctacccatttttgtgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactaccc 31979744  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||  || ||||| |||| ||||||||||| ||||||      ||||||| |||||||| | ||||||||||| |||||    
T  31979745 aaggtgtttacaatgtttctcaacccaaaagaacctcactacaaagacactcaaccctaaagttacctcctttgcagtccaagtttctctctct 31979838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 31086437 - 31086125
Alignment:
Q  29 atttctacccattttcatgtcagccacacttac-aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    |||||||||||||||  ||||| ||||||| |  |||||||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||| |||    
T  31086437 atttctacccattttg-tgtcacccacactcaataatgaatcctaagagaaaacataaaaagaagctttt-gatccttccaatggtgaaatctcacaacc 31086340  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaag 221  Q
    |||||||||||||||||||  || || ||||||  ||||||||||| ||||||      ||||||| | |||||||||||||||||||| ||||||| ||    
T  31086339 caaggtgtttacaatgtttctcaacctaagagatcctcactacaaagacactcaaccctaaagttaccccctttgtaatccaagtttctctctcttccag 31086240  T
Q  222 ttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacg-attgaccaaattgtgtcacgattgacgtgtacga 320  Q
     |  ||||||||| ||| |||| | ||||||||||||| ||     || ||||||||| ||||||  ||  |||||| ||| ||||||||  | ||||||    
T  31086239 ctcaccttcaaaatctgcacaagaacacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacga 31086140  T
Q  321 cccaaggtatgacca 335  Q
    ||||||||| |||||    
T  31086139 cccaaggtacgacca 31086125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 29 - 259
Target Start/End: Complemental strand, 5572205 - 5571972
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||| ||||||  ||||| |||||||  ||||||||||||||| ||||||||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  5572205 atttctacgcattttg-tgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttt-gatcattccaatagtgaaatctcactaccc 5572108  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| |||||||||  | ||||||||| |||| |      ||||||| |||| ||||||||||||||||| |||| | |||     
T  5572107 aaggtgtttacaatgtttcccaacccaagagatccccactacaaagacacccaaccctaaagttacctccattgtaatccaagtttctctctc-taaagc 5572009  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    | |||||||||||||  |||| | |||||||||||||    
T  5572008 tctccttcaaaaactccacaagaacacttatatagca 5571972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 21801308 - 21801153
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaa-tgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    |||||||||||||||  ||||| |||||||  ||| |||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  21801308 atttctacccattttg-tgtcacccacactctcaaatgaaccctaagagaaaacacaaaaggaagctttttgatccttccaatgttgaaatctcactacc 21801210  T
Q  128 caaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||||| ||| ||  |||||||| ||||||||||| ||||||||    
T  21801209 caaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaa 21801153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 95 - 259
Target Start/End: Complemental strand, 5757376 - 5757206
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  || | |||||| ||||||      |||||||     
T  5757376 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctaaatacaaagacactcaaccctaaagttac 5757277  T
Q  189 ctcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |||||||||||||||||||||| ||||||| || | |||| ||||| ||| |||||| ||||||| |||||    
T  5757276 ctcctttgtaatccaagtttctctctcttccagctctcctccaaaatctgcacaaaaacacttatttagca 5757206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 84 - 335
Target Start/End: Complemental strand, 5017405 - 5017148
Alignment:
Q  84 aaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc--- 180  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||       
T  5017405 aaaaggaagcttttcgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaac 5017306  T
Q  181 ---aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaat 277  Q
       ||||||| ||| |||||||||||||||||| | ||||     | |||||||||| ||| |||| | ||||||||||||  ||     ||||||||||    
T  5017305 cctaaagttatctcgtttgtaatccaagtttctctttctttttcctctccttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaat 5017206  T
Q  278 cgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    || |||||  ||   ||||| ||| ||||||||  | ||||||||||||||| |||||    
T  5017205 cgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 5017148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 22709208 - 22709340
Alignment:
Q  94 tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa------agtta 187  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||||      ||||     
T  22709208 tttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttc 22709307  T
Q  188 actcctttgtaatccaagtttctttctcttcaa 220  Q
     |||||||||||||||||||| | |||||||||    
T  22709308 cctcctttgtaatccaagtttttctctcttcaa 22709340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 18233013 - 18233096
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 146  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18233013 aatgaatcctaagagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 18233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 335
Target Start/End: Original strand, 22963866 - 22964143
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||| | ||||||||||  |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||     
T  22963866 aatgaatcctaaaagaaaacacaaagggaaa-tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagat 22963964  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
      |||||||||| ||||||      ||||||| ||| ||||||||| |||||||| ||| |||||| | |  ||||||| ||| | || | |||||||||    
T  22963965 cttcactacaaagacactcaaccctaaagttagctcttttgtaatcaaagtttctctcttttcaagctctagttcaaaatctgca-aagaacacttatat 22964063  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     | |||||||||| |||||| ||  |||||||||| |||| ||| || ||||||  ||||||| |||||    
T  22964064 agcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgacca 22964143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 335
Target Start/End: Complemental strand, 23824527 - 23824250
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||| | ||||||||||  |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||     
T  23824527 aatgaatcctaaaagaaaacacaaagggaaa-tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagat 23824429  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
      |||||||||| ||||||      ||||||| ||| ||||||||| |||||||| ||| |||||| | |  ||||||| ||| | || | |||||||||    
T  23824428 cttcactacaaagacactcaaccctaaagttagctcttttgtaatcaaagtttctctcttttcaagctctagttcaaaatctgca-aagaacacttatat 23824330  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||| ||     | |||||||||| |||||| ||  |||||||||| |||| ||| || ||||||  ||||||| |||||    
T  23824329 agcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgacca 23824250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 10077129 - 10077027
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10077129 atttctacccattttg-tgtcacccacact--caatgaatcctaagataaaacacaaaaggaagctttttgatccttccaatggtcaaatctcactaccc 10077033  T
Q  129 aaggtg 134  Q
    ||||||    
T  10077032 aaggtg 10077027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 335
Target Start/End: Original strand, 18234382 - 18234528
Alignment:
Q  189 ctcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgat 288  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||| | ||||||||||||| ||     |||||||||||| |||||| |    
T  18234382 ctcctttgtaatccaagtttctttctcttcaagctctccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt 18234481  T
Q  289 tgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    || |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  18234482 tgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 18234528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 14521817 - 14521953
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaa-tctcactacccaaggtgttta 138  Q
    ||||||||||| |||||||  |||| |||||||||| ||||||  ||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||    
T  14521817 ttttcatgtcacccacactctcaataaatcctaagagaaaacattaaaggaagattttttatccttccaatggtgaaattctcactacccaaggtgttta 14521916  T
Q  139 caatgttttccatcc--caagagaatctcactacaaa 173  Q
    |||||||| ||| ||  |||||||| || ||||||||    
T  14521917 caatgtttcccaaccctcaagagaacctaactacaaa 14521953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 4630120 - 4630203
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 146  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  4630120 aatgaatcctaagagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaatgtgtttaaaatgttt 4630203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 21356214 - 21356314
Alignment:
Q  72 aagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactaca 171  Q
    ||||||| |||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| | | |||||||||  |||||||||    
T  21356214 aagaaaagacacaaaaggaagctttt-gattcttccaatgatgaaatctcactacccaaggtgtttacaatgtttcctaacccaagagatcctcactaca 21356312  T
Q  172 aa 173  Q
    ||    
T  21356313 aa 21356314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 220
Target Start/End: Complemental strand, 31076888 - 31076702
Alignment:
Q  41 tttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttaca 140  Q
    ||||| |||| ||||| | || ||||||||||||| ||||||| |||  ||  ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  31076888 tttcaagtcacccacaatcactatgaatcctaagagaaaacactaaagaaatttttttgatcattccaatggtgaaatctcaatacctaaggtgtttaca 31076789  T
Q  141 atgttttccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaat-ccaagtttctttctcttcaa 220  Q
    | ||||  || ||||||  ||  |||||||||| ||||||||      ||||| |||||||||| | ||||||||||||||||||||    
T  31076788 aagtttctcaacccaaggcaacgtcactacaaagacactcaaccctatagttatctcctttgtattcccaagtttctttctcttcaa 31076702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 10076997 - 10076843
Alignment:
Q  181 aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgc 280  Q
    ||||||| |||||||||||||||||||||| |||||| ||| | |||||||||| ||| |||| | ||  ||||||||| ||     |||||||| |||     
T  10076997 aaagttacctcctttgtaatccaagtttctctctcttaaagctctccttcaaaatctgcacaagaacatatatatagcaatcttcagctgtcaaagtcgt 10076898  T
Q  281 gtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||||| ||| |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  10076897 gtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 10076843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 335
Target Start/End: Complemental strand, 21272846 - 21272641
Alignment:
Q  136 ttacaatgttttccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttctttctcttcaagttatcctt 229  Q
    |||||||||||  || |||||||||| ||||||||||| ||||||||      ||||| | ||||||||||| |||||||| || ||||||||| | |||    
T  21272846 ttacaatgtttcgcaacccaagagaacctcactacaaagacactcaaccctaaagttaccccctttgtaatcaaagtttctctcacttcaagttctactt 21272747  T
Q  230 caaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggta 329  Q
    ||||||||| | | || ||||||||||||| ||      ||||||||| | |||||||||| ||||||  || |||| |||  | |||||| ||||||||    
T  21272746 caaaaactgcaaagaaacacttatatagcagtcttcagttgtcaaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaaggta 21272647  T
Q  330 tgacca 335  Q
    ||||||    
T  21272646 tgacca 21272641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 5674660 - 5674574
Alignment:
Q  99 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||    
T  5674660 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaa 5674574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 33721489 - 33721390
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgttttccatcccaagaga 160  Q
    |||||||||||||| ||||||| ||| | |||||||| ||| |||||||  ||||||||||||| | ||||||||||| ||||||| ||| || ||||||    
T  33721489 aatgaatcctaagagaaaacactaaagggagctttttcatcattccaataatgaaatctcacta-caaaggtgtttacaaatgtttcccaacctaagaga 33721391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 23896643 - 23896721
Alignment:
Q  181 aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    ||||||| |||||||||||||||||||||| |||||||||| | | ||||||||  || |||| | | |||||||||||    
T  23896643 aaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatatgcacaagaactcttatatagca 23896721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 1115080 - 1114999
Alignment:
Q  18 aacaaaccctgatttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagcttttt 98  Q
    |||||||||| ||||||| ||||||| || |||| ||||||| |||||||||  ||||| ||||||||||| ||| ||||||    
T  1115080 aacaaaccctaatttctatccatttttcaagtcacccacactcacaatgaatattaagagaaaacacaaaaggaaacttttt 1114999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 5385789 - 5385845
Alignment:
Q  90 aagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 146  Q
    ||||||||| ||||||| |||||||||||||||||||  |||||| || ||||||||    
T  5385789 aagcttttttatccttctaatggtgaaatctcactacttaaggtgattgcaatgttt 5385845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 31404872 - 31404906
Alignment:
Q  127 ccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||||| ||||||||||    
T  31404872 ccaaggtgtttacaatgttttccaacccaagagaa 31404906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 28137605 - 28137641
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  28137605 acccaaggtgtttacaatgtttcccaacccaagagaa 28137641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 33211382 - 33211418
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  33211382 acccaaggtgtttacaatgtttcccaacccaagagaa 33211418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 4696571 - 4696339
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  || |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  4696571 atttctacccattttg-tgtcacccacactctcattgaatcctaagagaaaacacaaaaggaagctttttgatctttccaatggtgaaatctcactaccc 4696473  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||||||||||||||||| ||||||||||     
T  4696472 aaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctttgtaatccaagtttctctctcttcaagc 4696373  T
Q  223 tatccttcaaaaactgaacaaaagcacttatata 256  Q
    | |||||||||| ||| |||| | | ||||||||    
T  4696372 tctccttcaaaatctgcacaagaacccttatata 4696339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 23799506 - 23799228
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||| |||||||||      
T  23799506 atgaatcctaagggaaaacacaaaaggaagctttttgatccttccaatggtgaaatctccctactcaaggtgtttacaatgttccccaacccaagagatc 23799407  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    ||| ||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| ||||||||||||  || |||| | ||||||||||    
T  23799406 ctctctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctatccttcaaaatatgcacaagaacacttatata 23799307  T
Q  257 gcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||| ||     |||||||||||| |||||| ||| |||||| ||| ||| ||||  | ||||||||||| ||| |||||    
T  23799306 gcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgacccaacgtacgacca 23799228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 62 - 259
Target Start/End: Complemental strand, 5702412 - 5702208
Alignment:
Q  62 aatgaatcctaaga-aaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||    
T  5702412 aatgaatcctaagagaaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagaga 5702313  T
Q  161 atctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttata 254  Q
      ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||  | |||||||||| ||| |||| | ||||||||    
T  5702312 tcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaacctctccttcaaaatctgcacaagaacacttata 5702213  T
Q  255 tagca 259  Q
    |||||    
T  5702212 tagca 5702208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 62 - 259
Target Start/End: Original strand, 7412507 - 7412709
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||| ||||||| || ||| |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  7412507 aatgaaccctaagagaagacataaaaggaagctttt-gatcctttcaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 7412605  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||| ||||||| ||||||      ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | |||||||||    
T  7412606 cctctctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttatat 7412705  T
Q  256 agca 259  Q
    ||||    
T  7412706 agca 7412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 29 - 335
Target Start/End: Original strand, 3051252 - 3051566
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| |||||||   |||||  ||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  3051252 atttctacccatttttcatgtcacttacactctcaatgaatcctaagagaaagcacaaaaggaagctttttgatctttccaatggtgaaatctcactacc 3051351  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaat-ccaagtttctttctcttcaa 220  Q
    |||| |||||||||||||| ||| | |||||||| | ||||||||| ||||||      ||||||  ||||||| || | |||||||||| |||||||||    
T  3051352 caagatgtttacaatgtttcccaactcaagagaaccccactacaaagacactcaaccctaaagttctctcctttatagtcccaagtttctctctcttcaa 3051451  T
Q  221 gttatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaatt-gtgtcacgattgacgtgtacg 319  Q
    | | || ||||||| ||| | | || ||||||||||| | || |   || ||||||| | |||||||||| ||||||| ||||||||||||| |  ||||    
T  3051452 gctctctttcaaaatctgcatagaaacacttatatagtactctgcagctatcaaaattgtgtcacgattg-ccaaattcgtgtcacgattgatgcatacg 3051550  T
Q  320 acccaaggtatgacca 335  Q
    |||||| ||| |||||    
T  3051551 acccaatgtacgacca 3051566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 19752358 - 19752165
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| |||||||  ||||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  19752358 atttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacacaaag-gaagctttttgatccttccaatgatgaaatctcactacc 19752260  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||| |||  || |||||||||| ||||||||||| ||||||      ||||||| ||||||||  |||||||||||| |||||    
T  19752259 caaggtgtttacaatatttcacaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgcgatccaagtttctctctct 19752165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 4456213 - 4456396
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| | |||||    
T  4456213 acacaaaaggaagctttt-gatccttctaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacagagacact 4456311  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagc 258  Q
    |      ||||||| |||||||||||||||||||||| |||||||||| | | |||||||| ||| |||| | ||||||||||||    
T  4456312 caaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatctgcacaagaacacttatatagc 4456396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 174
Target Start/End: Complemental strand, 7493126 - 7492992
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    |||||| |||| |||||||  |||| |||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  7493126 ttttcaagtcacccacactctcaataaatcctaagaaaaaacactaaaggaagctttttgatccttctaattgtgaaatctcactacccaaggtgtttac 7493027  T
Q  140 aatgttttccatcccaagagaatctcactacaaat 174  Q
    ||||||| |||  ||||||||| ||||||||||||    
T  7493026 aatgtttcccaatccaagagaacctcactacaaat 7492992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 26403159 - 26403038
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagaga 160  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||||||    
T  26403159 atgaatcataagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagaga 26403060  T
Q  161 atctcactacaaatacactcaa 182  Q
    | ||||||||||| ||||||||    
T  26403059 acctcactacaaagacactcaa 26403038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 9054328 - 9054231
Alignment:
Q  85 aaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  9054328 aaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgattataatgttttccaacccaagagaatctcactacaaaaacactcaa 9054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 63 - 256
Target Start/End: Complemental strand, 19175683 - 19175482
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaat 162  Q
    ||||| ||||||| || |||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||||||||      
T  19175683 atgaaccctaagagaagacacaaaaggaaactttt-gatccttccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatc 19175585  T
Q  163 ctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaa---gttatccttcaaaaactgaacaaaagcacttat 253  Q
    ||||||||||| ||||||      ||||||| |||||||||||||||||||||| || ||||||   | | |||||||||||||| |||| | |||||||    
T  19175584 ctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctgatctccttcaaaaactgtacaagaacacttat 19175485  T
Q  254 ata 256  Q
    |||    
T  19175484 ata 19175482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 6127389 - 6127511
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagag 159  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| ||  ||||||    
T  6127389 aatgaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaaatgtttacaatgtttcccaaccctcaagag 6127488  T
Q  160 aatctcactacaaatacactcaa 182  Q
    || ||||||||||| ||||||||    
T  6127489 aacctcactacaaagacactcaa 6127511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 30 - 235
Target Start/End: Original strand, 28307695 - 28307908
Alignment:
Q  30 tttctacccattt-tcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    ||||||| ||||| ||| |||| |||||||  || |||||||||| | |||||||||||  ||||||||| ||||||||||| |||||||||||||||||    
T  28307695 tttctacacatttctcaagtcacccacactctcactgaatcctaaaagaaaacacaaaagaaagcttttttatccttccaattgtgaaatctcactaccc 28307794  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatcc-aagtttctttctcttcaag 221  Q
    |||||||| ||||||||| ||| || ||||||| |   ||||||| ||||||      ||||||| |||||||||||||| |||||||| ||||||||||    
T  28307795 aaggtgttaacaatgtttcccaacctaagagaaccgtgctacaaagacactcaactctaaagttacctcctttgtaatcctaagtttctctctcttcaag 28307894  T
Q  222 ttatccttcaaaaa 235  Q
     | || ||||||||    
T  28307895 ctctcattcaaaaa 28307908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 5990514 - 5990385
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    |||||| |||| |||||||| ||||||||||||||| ||||||| |||  ||||||||||| | ||| |||||||||||||||| | ||||| || ||||    
T  5990514 ttttcaagtcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattac 5990415  T
Q  140 aatgttttccatcccaagagaatctcacta 169  Q
    ||||||| ||| |||||||||| |||||||    
T  5990414 aatgtttcccaacccaagagaacctcacta 5990385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 31071121 - 31071036
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||| ||||||||    
T  31071121 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaa 31071036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 1261846 - 1261721
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||      ||||  ||    
T  1261846 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 1261747  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  1261746 cctttgtaatccaagtttctctctct 1261721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 26288095 - 26288220
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| | ||||||| |||| ||||||| ||| ||||      ||||  |     
T  26288095 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccc 26288194  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  26288195 cctttgtaatccaagtttctctctct 26288220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 26301352 - 26301477
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| | ||||||| |||| ||||||| ||| ||||      ||||  |     
T  26301352 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccc 26301451  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  26301452 cctttgtaatccaagtttctctctct 26301477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 26313346 - 26313471
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| | ||||||| |||| ||||||| ||| ||||      ||||  |     
T  26313346 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccc 26313445  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  26313446 cctttgtaatccaagtttctctctct 26313471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 13204715 - 13204634
Alignment:
Q  61 caatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaat 142  Q
    |||||||||||| || |||| |  |||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  13204715 caatgaatcctatgagaaaatattaaataaagctttttgattctcccaacggtgaaatctcactacccaaggtgtttacaat 13204634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 31513296 - 31513185
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    ||||||||| ||||||  |||| ||||||| |||||||||||||||| ||||||| ||| ||   ||||| ||||||||  |  |||||||||||||  |    
T  31513296 atttctacctattttcgagtcatccacactcacaatgaatcctaagagaaaacactaaa-gatttttttttatccttcctctaatgaaatctcactattc 31513198  T
Q  129 aaggtgtttacaa 141  Q
    |||||||||||||    
T  31513197 aaggtgtttacaa 31513185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 4759944 - 4759878
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt---ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||| ||||||||||||   ||| ||||||||| |||| ||||||| ||||||||    
T  4759944 ctcactacccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaa 4759878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 10689009 - 10688944
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||    
T  10689009 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaa 10688944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 4162468 - 4162435
Alignment:
Q  128 caaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||||||||||||||||||| ||||||||||    
T  4162468 caaggtgtttacaatgttttccaacccaagagaa 4162435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 4731629 - 4731593
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  4731629 acccaaggtgtttacaatgtttcccaacccaagagaa 4731593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 15212757 - 15212721
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  15212757 acccaaggtgtttacaatgtttcccaacccaagagaa 15212721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 18106275 - 18106311
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  18106275 acccaaggtgtttacaatgtttcccaacccaagagaa 18106311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 27811249 - 27811213
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||||||| || |||||||    
T  27811249 acccaaggtgtttacaatgttttccaacctaagagaa 27811213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 33352121 - 33352085
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  33352121 acccaaggtgtttacaatgtttcccaacccaagagaa 33352085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 36979605 - 36979669
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt-ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||| |||||||||||| ||| || ||||||  ||| ||||||| ||||||||    
T  36979605 ctcactacccaaggtgattacaatgttttcccaacctaagagacactctctacaaagacactcaa 36979669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 43036394 - 43036358
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  43036394 acccaaggtgtttacaatgtttcccaacccaagagaa 43036358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 2647660 - 2647349
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2647660 atttctacccattttg-tgtcacccacactctcaatgaatcctaagagaaaacacaaaatgaagttttttgatccttccaatggtgaaatctcactaccc 2647562  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagt 222  Q
    |||||| |||| |||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||||| ||||||||||| |||||  ||      
T  2647561 aaggtgcttaccatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctttgtagtccaagtttctctctctaaaatc 2647462  T
Q  223 tatccttcaaaaactgaacaaaagcacttatatagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacc 322  Q
    | |||||||||| ||| |||| | ||||| ||||||| ||     || |||||||||  ||||| ||| |||||| ||| ||||||||  | ||||||||    
T  2647461 tctccttcaaaatctgcacaagaacacttttatagcagtcttcagctctcaaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacc 2647362  T
Q  323 caaggtatgacca 335  Q
    ||||||| |||||    
T  2647361 caaggtacgacca 2647349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 61 - 301
Target Start/End: Complemental strand, 4796600 - 4796355
Alignment:
Q  61 caatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4796600 caatgaatcctaagagaaaacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagaga 4796501  T
Q  161 atctcactacaaatacactc-----aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
      ||||||||||| ||||||     ||||||| |||||||||||||||||||||| || || |||| | | |||||||| ||  |||  | |||||||||    
T  4796500 tcctcactacaaagacactcaacctaaagttacctcctttgtaatccaagtttctctcactccaagctcttcttcaaaatctacacaggaacacttatat 4796401  T
Q  256 agcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtg 301  Q
    |||| ||    ||| ||||||||| |||||| ||| | ||||||||    
T  4796400 agcaatcttcaactatcaaaatcgtgtcacgtttgtctaaattgtg 4796355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 61 - 335
Target Start/End: Complemental strand, 33332382 - 33332102
Alignment:
Q  61 caatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    |||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  || |||||||||    
T  33332382 caatgattcctaagagaaaacacaaagggaagctttttgatccttccaatggtgaaatctcactacccaagatgtttacaatgtttctcaacccaagaga 33332283  T
Q  161 atctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttata 254  Q
    | || |||||||| ||||||      ||||||| |||||||||||||||||||||| |||||  ||| | |||||||||| ||| | | || |||| |||    
T  33332282 accttactacaaaaacactcaaccctaaagttacctcctttgtaatccaagtttctatctctcaaagctctccttcaaaatctgcaaagaaacactaata 33332183  T
Q  255 tagcattcaggcactgtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    ||||| ||    ||||||||||||| ||||| |||| |||||| ||| ||||||||  | ||||||||||||||| |||||    
T  33332182 tagcagtcttcaactgtcaaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgacca 33332102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 216
Target Start/End: Original strand, 20284233 - 20284415
Alignment:
Q  40 ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 139  Q
    ||||||| ||| |||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20284233 ttttcatatcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac 20284332  T
Q  140 aatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||| ||| |||||||||| ||||||||||| ||||||      ||||||| ||||||| |||||||||||||| |||||    
T  20284333 aatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctct 20284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 23402978 - 23402784
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||  |||  ||||||  ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  23402978 atttctacccatttttcacatcactcacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacc 23402879  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||    
T  23402878 caaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 30 - 216
Target Start/End: Original strand, 2580523 - 2580715
Alignment:
Q  30 tttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    |||||||||||||| ||| ||| |||||||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  2580523 tttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatcctttcaatggtgaaatctcactaccc 2580622  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||| ||||||      ||||||| |||||||| ||||||||||||| |||||    
T  2580623 aaggtgtttacaatgttttccaacccaagagaacctcac-acaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctct 2580715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 46516237 - 46516076
Alignment:
Q  61 caatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagaga 160  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  46516237 caatgaatcttaagagaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagaga 46516138  T
Q  161 atctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
      ||||||||||| ||||||      ||||||| |||||||||||||||||||||| |||||    
T  46516137 tcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 46516076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 3047387 - 3047622
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactaccc 128  Q
    ||||||||||||||| | |||| |||||||  ||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  3047387 atttctacccatttttaagtcacccacactctcaatgaatcttaagataaaacacaaaaggaagctttttgatccttccaatgatgaaatctcactaccc 3047486  T
Q  129 aaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaat-ccaagtttctttctcttcaag 221  Q
    ||| || ||| | ||||| ||| |||||||||| ||||||||||| ||||||      ||||||| |||||||||||| |||||||||| |||||| |||    
T  3047487 aagatgattatagtgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatcccaagtttctctctcttaaag 3047586  T
Q  222 ttatccttcaaaaactgaacaaaagcacttatatag 257  Q
     | | |||||||| ||||||  || |||||||||||    
T  3047587 ctcttcttcaaaatctgaactgaaacacttatatag 3047622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 9189972 - 9189777
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| |||||||   |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  9189972 atttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaacacacaaggaagctttttgatccttccaatggtgaaatctcactacc 9189873  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaa-tacactc------aaagttaactcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||| ||| |||||||||| || ||||||||  ||||||      ||||||| |||||||| ||||||||||||| |||||    
T  9189872 caaggtgtttacaatgtttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttatctcctttgcaatccaagtttctctctct 9189777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 9185139 - 9184985
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| |||||||   |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  9185139 atttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaacacacaaggaagctttttgatccttccaatggtgaaatctcactacc 9185040  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||| | ||||||    
T  9185039 caaggtgtttacaatgtttcccaacccaagagaaccttactacaaagatactcaa 9184985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 5817246 - 5817081
Alignment:
Q  18 aacaaaccctgatttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaa 116  Q
    |||||| ||| ||||||| ||||||| || ||||  ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5817246 aacaaaacctaatttctatccatttttcaagtcactcacactctcaatgaatcctaagaaaaaacacaaaaggaagctttttgatccttccaatggtgaa 5817147  T
Q  117 atctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||| |||||||| |||||||||||| ||| || || |||| ||||||||||| ||||||||    
T  5817146 atctcactccccaaggtatttacaatgtttcccaaccaaatagaacctcactacaaagacactcaa 5817081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 259
Target Start/End: Original strand, 21989110 - 21989277
Alignment:
Q  98 tgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactc 191  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||    
T  21989110 tgatccttccaatggtaaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaacctaaagttacctc 21989209  T
Q  192 ctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    ||||||||||||||||||| || ||||||| | |||||||||| ||| |||| | |||||||||||||    
T  21989210 ctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaacacttatatagca 21989277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 29159936 - 29160093
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaat--gaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactac 126  Q
    |||||||||||||||  ||||| |||| || |||||  ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  29159936 atttctacccatttttgtgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatgttgaaatctcactac 29160035  T
Q  127 ccaaggtgtttacaatgttttccatcc--caagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||||||| ||| ||  |||||||| ||||||| ||| ||||||||    
T  29160036 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactataaagacactcaa 29160093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 9235547 - 9235405
Alignment:
Q  29 atttctacccatttt-catgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||| ||| ||| || ||||  ||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||| |    
T  9235547 atttctacccatttttcatatcacccgcactctcaacgaatcctaagagaaaacacaaaaggaagctttttgatccttgcaatggtgaaatatcactatc 9235448  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactac 170  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  9235447 caaggtgtttacaatgtttcccaacccaagagaatctcactac 9235405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 35960949 - 35961078
Alignment:
Q  29 atttctacccattttcatgtcagccacacttaca-atgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacc 127  Q
    |||||||||||||||||| ||| ||||||| | | ||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  35960949 atttctacccattttcatatcacccacactcaaagatgaatcttaagagaaaacgcaaaaggaagctttttgatccttccaatggtgaaatctcactacc 35961048  T
Q  128 caaggtgtttacaatgttttccatcccaag 157  Q
     |||||||||||||||||| ||| ||||||    
T  35961049 taaggtgtttacaatgtttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 95 - 256
Target Start/End: Original strand, 2479535 - 2479702
Alignment:
Q  95 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||| ||| ||||||      ||||||      
T  2479535 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttcc 2479634  T
Q  189 ctcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatata 256  Q
    |||||||||||||||||||||| |||||||||| | | || ||||| ||| |||| | ||||||||||    
T  2479635 ctcctttgtaatccaagtttctctctcttcaagctcttctccaaaatctgcacaagaacacttatata 2479702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 47263851 - 47263997
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||| || |||||| |||||||||||| |||||    
T  47263851 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtatttacaatgtttcccaaccgaagagattctcactacaaagacact 47263949  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaag 221  Q
    |      ||||||| ||||||| |||||||||||||| ||||||||||    
T  47263950 caaccctaaagttacctcctttataatccaagtttctctctcttcaag 47263997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 49091829 - 49091924
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaag 157  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  49091829 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgttttcaatgtttcccaacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 56115 - 56195
Alignment:
Q  62 aatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaat 142  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56115 aatgaatcctaagagaaaacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaat 56195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 44848015 - 44847891
Alignment:
Q  103 cttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttg 196  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||  ||||||||||| ||||||      ||||||| |||||||     
T  44848015 cttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctccttta 44847916  T
Q  197 taatccaagtttctttctcttcaag 221  Q
    |||||||||||||| ||||||||||    
T  44847915 taatccaagtttctctctcttcaag 44847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 18413843 - 18413968
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  ||| |||||||||  ||||||||||| ||||||||      ||||  ||    
T  18413843 gatccttccaatggtgaaatctcactacccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 18413942  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  18413943 cctttgtaatccaagtttctctctct 18413968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 21640013 - 21640138
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||| ||||||| ||||||||      ||||  ||    
T  21640013 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccct 21640112  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  21640113 cctttgtaatccaagtttctctctct 21640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 21646211 - 21646336
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||| ||||||| ||||||||      ||||  ||    
T  21646211 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtttcct 21646310  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    ||||||||||| |||||||| |||||    
T  21646311 cctttgtaatctaagtttctctctct 21646336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 21983463 - 21983536
Alignment:
Q  72 aagaaaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 146  Q
    |||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21983463 aagagaaaacacaaaaggaagcttat-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 21983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 125 - 259
Target Start/End: Original strand, 49091918 - 49092058
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttctttctcttc 218  Q
    ||||||||||||| |||||||| ||| ||||||| |  |||| |||||| ||||||||      ||||| |||||||||||||||||||||| |||||||    
T  49091918 acccaaggtgttttcaatgtttcccaacccaagatatcctcagtacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctcttc 49092017  T
Q  219 aagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    ||| | |||||||||| ||| |||| | |||||||||||||    
T  49092018 aagctctccttcaaaatctgcacaagaacacttatatagca 49092058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 18408967 - 18409092
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||| ||||||||      ||||  ||    
T  18408967 gatccttttaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccct 18409066  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    ||||||||||| |||||||| |||||    
T  18409067 cctttgtaatctaagtttctctctct 18409092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 79634 - 79755
Alignment:
Q  142 tgttttccatcccaagagaatctcactacaaatacactcaa------agttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaa 235  Q
    ||||||||| ||||| |||  ||||||||||| ||||||||      ||||| |||||||||||||||||||||| |||||||||| | ||||||||||     
T  79634 tgttttccaacccaaaagatcctcactacaaagacactcaatcttaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaat 79733  T
Q  236 ctgaacaaaagcacttatatag 257  Q
    ||| |||| | ||| |||||||    
T  79734 ctgcacaagaacacatatatag 79755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 1533334 - 1533208
Alignment:
Q  99 gatccttccaatggtgaaatc-tcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaac 189  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||       |||  |    
T  1533334 gatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccc 1533235  T
Q  190 tcctttgtaatccaagtttctttctct 216  Q
    ||||||||||||||||||||| |||||    
T  1533234 tcctttgtaatccaagtttctctctct 1533208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 25615834 - 25615798
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25615834 acccaaggtgtttacaatgttttccaacccaagagaa 25615798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 47674140 - 47674176
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||||||| ||||||||||    
T  47674140 acccaaggtgtttacaatgttttccaacccaagagaa 47674176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 3050492 - 3050555
Alignment:
Q  272 caaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||||||| |||||||||  ||||||  |||||||||||| | ||||||||||||||| |||||    
T  3050492 caaaatcgtgtcacgattttccaaatgatgtcacgattgatgcgtacgacccaaggtacgacca 3050555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 2058196 - 2058261
Alignment:
Q  119 ctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa 182  Q
    |||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||    
T  2058196 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaa 2058261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 26417134 - 26417069
Alignment:
Q  270 gtcaaaatcgcgtcacgattgaccaaattgtgtcacgattgacgtgtacgacccaaggtatgacca 335  Q
    |||||||||| |||||||||| |||||| ||| |||| |||  | ||||||||||||||| |||||    
T  26417134 gtcaaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgacccaaggtacgacca 26417069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 41649206 - 41649243
Alignment:
Q  124 tacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  41649206 tacccaaggtgtttacaatgtttcccaacccaagagaa 41649243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 4586132 - 4586096
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  4586132 acccaaggtgtttacaatgtttcccaacccaagagaa 4586096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 31733166 - 31733202
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  31733166 acccaaggtgtttacaatgtttcccaacccaagagaa 31733202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 38671419 - 38671455
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  38671419 acccaaggtgtttacaatgtttcccaacccaagagaa 38671455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 43864215 - 43864179
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  43864215 acccaaggtgtttacaatgtttcccaacccaagagaa 43864179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 47676333 - 47676369
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  47676333 acccaaggtgtttacaatgtttcccaacccaagagaa 47676369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 48489402 - 48489366
Alignment:
Q  125 acccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  48489402 acccaaggtgtttacaatgtttcccaacccaagagaa 48489366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 63 - 259
Target Start/End: Original strand, 85850 - 86052
Alignment:
Q  63 atgaatcctaaga-aaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaa 161  Q
    |||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||     
T  85850 atgaattctaagagaaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcactacccaaagtgtttacaatgtttcccaacccaagagat 85948  T
Q  162 tctcactacaaatacactc------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatat 255  Q
     ||||||||||| ||||||      ||||||| |||||||||||||||||||||| || ||||||| |||||||||||| ||| |||| | |||||||||    
T  85949 cctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctatccttcaaaatctgcacaagaacacttatat 86048  T
Q  256 agca 259  Q
    ||||    
T  86049 agca 86052  T

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Target: scaffold0087 (Bit Score: 99; Significance: 8e-49; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 80 - 259
Target Start/End: Complemental strand, 36744 - 36560
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||    
T  36744 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacact 36646  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |      ||||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||| |||| | ||||| |||||||    
T  36645 caaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaacacttttatagca 36560  T

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Target: scaffold0087; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 80 - 259
Target Start/End: Complemental strand, 43873 - 43689
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||  ||||||||||| |||||    
T  43873 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacact 43775  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttcaagttatccttcaaaaactgaacaaaagcacttatatagca 259  Q
    |      ||||||| |||||||||||||||||||||| ||||||| || | |||| ||||| ||| |||||| |||||||||||||    
T  43774 caaccctaaagttacctcctttgtaatccaagtttctctctcttccagctctcctccaaaatctgcacaaaaacacttatatagca 43689  T

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Target: scaffold0078 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 23664 - 23878
Alignment:
Q  29 atttctacccattttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaag-ctttttgatccttccaatggtgaaatctcactacc 127  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| | |||||| ||||||| |||||||| |||||||||||    
T  23664 atttctacccattttcatgtcagacacactcacaatgaatcctaagagaaaacacaaaatgatgccttttttatccttctaatggtgacatctcactacc 23763  T
Q  128 caaggtgtttacaatgttttccatcccaagagaatctcactacaaatacactc------aaagttaactcctttgtaatc-caagtttctttctcttcaa 220  Q
    ||||||| ||||||| ||||||| ||||| |||| ||||||| ||| || |||      ||||||| |||| |||||||| ||||||||| |||||| ||    
T  23764 caaggtgattacaattttttccaacccaatagaacctcactataaagacgctcaaccttaaagttacctccattgtaatctcaagtttctctctcttaaa 23863  T
Q  221 gttatccttcaaaaa 235  Q
    | | | |||||||||    
T  23864 gatcttcttcaaaaa 23878  T

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Target: scaffold0148 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 10897 - 11019
Alignment:
Q  63 atgaatcctaagaaaaaacacaaaat-gaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcc--caagag 159  Q
    ||||||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||    
T  10897 atgaatcctaagagaaaacagaaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagag 10996  T
Q  160 aatctcactacaaatacactcaa 182  Q
    || ||||||||||| ||||||||    
T  10997 aacctcactacaaagacactcaa 11019  T

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Target: scaffold0140 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 8329 - 8186
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactacaaatacact 179  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| |||||    
T  8329 acacaaaaggaagctttta-atccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacact 8231  T
Q  180 c------aaagttaactcctttgtaatccaagtttctttctcttc 218  Q
    |      ||||||  |||||||||||||||||||||| |||||||    
T  8230 caaccctaaagttccctcctttgtaatccaagtttctctctcttc 8186  T

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Target: scaffold0098 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 45383 - 45530
Alignment:
Q  80 acacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatctcactac-aaatacac 178  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||  |||||||| ||| |||     
T  45383 acacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcacaacccaagagatcctcactacaaaagacat 45481  T
Q  179 tc------aaagttaactcctttgtaatccaagtttctttctcttcaag 221  Q
    ||      ||||||| |||||||||||||||||||||| ||||||||||    
T  45482 tcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaag 45530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 17844 - 17719
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||      ||||  ||    
T  17844 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccct 17745  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  17744 cctttgtaatccaagtttctctctct 17719  T

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Target: scaffold0188; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 23937 - 23812
Alignment:
Q  99 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccatcccaagagaatctcactacaaatacactcaa------agttaact 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||| |||||||||  ||| ||||||| ||||||||      ||||  ||    
T  23937 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccct 23838  T
Q  191 cctttgtaatccaagtttctttctct 216  Q
    |||||||||||||||||||| |||||    
T  23837 cctttgtaatccaagtttctctctct 23812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 17466 - 17596
Alignment:
Q  111 ggtgaaatctcactacccaaggtgtttacaatgttttccatcccaagagaatct-cactacaaatacactc------aaagttaactcctttgtaatcca 203  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||| |||| ||||||||| ||||||      ||||||| ||||| |||||||||    
T  17466 ggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagag-atctccactacaaagacactcaaccgtaaagttacctcctatgtaatcca 17564  T
Q  204 agtttctttctc-ttcaagttatccttcaaaa 234  Q
    || |||| |||| |||||| ||| ||||||||    
T  17565 aggttctctctctttcaagctatacttcaaaa 17596  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 102471 - 102380
Alignment:
Q  17 aaacaaaccctgatttctaccca-ttttcatgtcagccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttcc 107  Q
    ||||||||||| ||||||||||| |||||| ||||  |||||| | ||| ||| | |||| ||||||| ||| || ||||||||||||||||    
T  102471 aaacaaaccctaatttctacccatttttcaagtcacacacactcataataaattcgaagagaaaacactaaaggatgctttttgatccttcc 102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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