View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2179R-Insertion-6 (Length: 560)

Name: NF2179R-Insertion-6
Description: NF2179R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2179R-Insertion-6
NF2179R-Insertion-6
[»] chr5 (9 HSPs)
chr5 (123-560)||(42313201-42313639)
chr5 (182-403)||(42312291-42312513)
chr5 (38-145)||(42313068-42313176)
chr5 (273-379)||(10175613-10175723)
chr5 (225-306)||(33014311-33014392)
chr5 (248-328)||(25545983-25546063)
chr5 (223-323)||(32259396-32259496)
chr5 (223-323)||(38016198-38016298)
chr5 (247-332)||(42631239-42631324)
[»] chr3 (10 HSPs)
chr3 (249-403)||(27879584-27879741)
chr3 (247-306)||(12746424-12746483)
chr3 (223-304)||(10976762-10976843)
chr3 (223-323)||(50239316-50239416)
chr3 (249-340)||(431677-431768)
chr3 (270-393)||(9261183-9261305)
chr3 (223-304)||(17763835-17763916)
chr3 (223-304)||(19065155-19065236)
chr3 (436-484)||(6087947-6087995)
chr3 (295-355)||(12125843-12125903)
[»] chr4 (7 HSPs)
chr4 (223-381)||(13228358-13228518)
chr4 (225-306)||(281504-281585)
chr4 (292-403)||(281670-281784)
chr4 (224-402)||(50814462-50814641)
chr4 (232-305)||(39974423-39974496)
chr4 (225-306)||(49953470-49953551)
chr4 (433-512)||(35308125-35308203)
[»] chr1 (7 HSPs)
chr1 (283-403)||(22636534-22636655)
chr1 (272-393)||(43387346-43387470)
chr1 (248-375)||(31090578-31090705)
chr1 (173-218)||(964204-964249)
chr1 (216-323)||(45920631-45920737)
chr1 (434-514)||(8313461-8313540)
chr1 (277-357)||(47782907-47782987)
[»] chr2 (10 HSPs)
chr2 (232-393)||(45658162-45658322)
chr2 (223-402)||(3395691-3395872)
chr2 (274-355)||(5789163-5789244)
chr2 (224-402)||(41754613-41754794)
chr2 (224-381)||(14868495-14868651)
chr2 (273-305)||(10999562-10999594)
chr2 (225-292)||(2593294-2593361)
chr2 (168-215)||(36049346-36049393)
chr2 (269-332)||(39406223-39406286)
chr2 (235-403)||(36719762-36719930)
[»] chr8 (14 HSPs)
chr8 (230-327)||(14373559-14373656)
chr8 (234-355)||(10901615-10901737)
chr8 (223-323)||(16221875-16221975)
chr8 (272-388)||(757816-757931)
chr8 (271-403)||(38290272-38290405)
chr8 (225-305)||(21589269-21589349)
chr8 (223-323)||(41529018-41529118)
chr8 (223-323)||(40114432-40114532)
chr8 (232-381)||(15630203-15630351)
chr8 (432-513)||(18431698-18431779)
chr8 (223-328)||(18432458-18432563)
chr8 (78-119)||(24681286-24681327)
chr8 (224-402)||(23142035-23142217)
chr8 (223-355)||(35226908-35227040)
[»] scaffold0169 (1 HSPs)
scaffold0169 (272-355)||(2013-2096)
[»] scaffold0159 (1 HSPs)
scaffold0159 (274-355)||(33536-33617)
[»] chr6 (8 HSPs)
chr6 (274-394)||(24174699-24174819)
chr6 (246-342)||(26894632-26894728)
chr6 (435-514)||(26894839-26894918)
chr6 (275-339)||(6836577-6836641)
chr6 (247-402)||(1594508-1594666)
chr6 (274-357)||(2976445-2976528)
chr6 (247-368)||(3532317-3532437)
chr6 (270-393)||(20873525-20873650)
[»] scaffold0114 (1 HSPs)
scaffold0114 (223-323)||(34478-34578)
[»] chr7 (10 HSPs)
chr7 (273-323)||(24708151-24708201)
chr7 (223-402)||(6679463-6679644)
chr7 (271-329)||(3343688-3343746)
chr7 (433-514)||(38789013-38789093)
chr7 (247-402)||(15721456-15721614)
chr7 (435-478)||(17510326-17510369)
chr7 (435-478)||(17542845-17542888)
chr7 (271-369)||(3345692-3345790)
chr7 (223-307)||(29502467-29502551)
chr7 (232-316)||(42080549-42080633)
[»] scaffold0191 (1 HSPs)
scaffold0191 (224-377)||(4823-4976)
[»] scaffold0284 (1 HSPs)
scaffold0284 (223-323)||(2981-3081)
[»] scaffold2098 (1 HSPs)
scaffold2098 (271-304)||(32-65)
[»] scaffold1590 (1 HSPs)
scaffold1590 (271-304)||(1499-1532)
[»] scaffold0377 (1 HSPs)
scaffold0377 (232-316)||(15383-15467)
[»] scaffold0021 (1 HSPs)
scaffold0021 (224-304)||(129350-129430)


Alignment Details
Target: chr5 (Bit Score: 399; Significance: 0; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 123 - 560
Target Start/End: Original strand, 42313201 - 42313639
Alignment:
Q  123 ggtaattgcattgactcaacaaattagttgagaaaaggaaatattgtagaacgtggaatgaagcatgacaatttaacgtttgaaatataataaatacaaa 222  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  42313201 ggtaattgcattgactcaacaaactagttaagaaaaggaaatattgtagaacgtggaatgaagcatgacaatttaccgtttgaaatataataaatactaa 42313300  T
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42313301 tatggacatccgtgctaagtacgagctataatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaatattggataaa 42313400  T
Q  323 agagtggaggatgaacaacagatcagtgaaaaaacacatatacttaagcctt-aaaatttggatgaagatgtggcatcattcacacggttgactcctcta 421  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42313401 agagtggaggatgaacaacacattagtgaaaaaacacatatacttaagccttaaaaatttggatgaagatgtggcatcattcacacggttgactcctcta 42313500  T
Q  422 gaagatccaacggttcaacattgtaggggagtgggagtggttcttagtggtggatcagagacaaggagagtctcatacttaatagagagatgtgcggagt 521  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42313501 gaagatccaacggttcaacattgtaggggagtgggagtggttcttagtggtggatcagagacaaggagagtctcatacttaatagagagatgtgcggagt 42313600  T
Q  522 attctccataccaataaaatccgggctatatttcacatc 560  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42313601 attctccataccaataaaatccgggctatatttcacatc 42313639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 182 - 403
Target Start/End: Complemental strand, 42312513 - 42312291
Alignment:
Q  182 gaagcatgacaatttaacgtttgaaatataataaatacaaatatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatatt 281  Q
    |||||||| |||||||||||    |||||||||||||| | |||| ||||  ||   ||||||| | ||||||||| ||||| |||||||||| ||||||    
T  42312513 gaagcatgtcaatttaacgtacataatataataaatactagtatgcacataggtatcaagtacgggttagaatttcgtcatatttggtggagaaaatatt 42312414  T
Q  282 gtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacatatacttaagccttaaaa-tt 380  Q
    |||||||||||||||||||||||  |||||||| |||| |||||||||| ||| ||||||| || |||||||||   |||||||||||||||||||| ||    
T  42312413 gtgatgtatcaagtgtcagttaagtcccaacatcggatgaaagagtggaagataaacaacaaataagtgaaaaagttcatatacttaagccttaaaattt 42312314  T
Q  381 tggatgaagatgtggcatcattc 403  Q
    |||||||||||| | ||||||||    
T  42312313 tggatgaagatgcgacatcattc 42312291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 42313068 - 42313176
Alignment:
Q  38 gtatgactcaaagtgtaaatatgtaactgttgagtcaagcaagaataatggcttaaaaatagctaacaaaaagaacgttatgaat-ggtaattgcattga 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  42313068 gtatgactcaaagtgtaaatatgtaactgttgagtcaagcaagaatcatggcttaaaaatagctaacaaaaagaacgttatgaatagctaattgctttga 42313167  T
Q  137 ctcaacaaa 145  Q
    || ||||||    
T  42313168 cttaacaaa 42313176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 10175613 - 10175723
Alignment:
Q  273 gagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtg----aaaaaacacatatactta 368  Q
    ||||||||||| | |||| ||||||||||||||| ||||||||  |||||||||| |||| ||||||||| || ||||    ||||||| |||||||||     
T  10175613 gagaatattgtaaagtattaagtgtcagttaaagtccaacattaaataaaagagtagaggttgaacaacaaataagtggaaaaaaaaactcatatacttt 10175712  T
Q  369 agccttaaaat 379  Q
    | |||||||||    
T  10175713 aaccttaaaat 10175723  T

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Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 306
Target Start/End: Complemental strand, 33014392 - 33014311
Alignment:
Q  225 tggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaag 306  Q
    |||||| |||||||||| ||| ||||||||||| ||||| ||  ||||||| |||||||||||||||||||||  |||||||    
T  33014392 tggacacccgtgctaagcacgggctagaatttcgtcatatttaatggagaggatattgtgatgtatcaagtgttggttaaag 33014311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 25546063 - 25545983
Alignment:
Q  248 ctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtg 328  Q
    |||||||||| ||||| |||  |||||||||||| ||||||||  || || |||||||||| || ||||||||||| ||||    
T  25546063 ctagaatttcatcatagttgagggagagaatattatgatgtattgagagttagttaaagccaaatattggataaaacagtg 25545983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 32259496 - 32259396
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| |||  ||| |||||| ||||| |||  ||||| |||||| ||||||||| |||||||||||||  | ||||| |||||||    
T  32259496 tatggacacccgtgccaagcacggactaaaatttcgtcatagttgagggagacaatattatgatgtatctagtgtcagttaaattcaaacatgggataaa 32259397  T
Q  323 a 323  Q
    |    
T  32259396 a 32259396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 38016298 - 38016198
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||||||||||||| |||  ||||||||||  |||| || |  ||| ||||||||||||||||  || ||||| ||||| |  |||||||||||||    
T  38016298 tatggacatccgtgctaattacaggctagaattttgtcatcctcgaaggatagaatattgtgatgtaataaatgtcaattaaatcttaacattggataaa 38016199  T
Q  323 a 323  Q
    |    
T  38016198 a 38016198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 332
Target Start/End: Original strand, 42631239 - 42631324
Alignment:
Q  247 gctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggagg 332  Q
    ||||||||||| ||||| |||  ||||| ||||||  |||||||| | |||||||||||  | ||||| ||||||||||| |||||    
T  42631239 gctagaatttcatcatagttgagggagacaatattacgatgtatctaatgtcagttaaattcaaacatgggataaaagagcggagg 42631324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 249 - 403
Target Start/End: Original strand, 27879584 - 27879741
Alignment:
Q  249 tagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagat-ca 347  Q
    ||||||||| || |||| |  ||| ||||||||||||||||||||||||| ||||||| | ||||||  ||||||||||||||| ||||||||| ||  |    
T  27879584 tagaatttcttcctactcgagggaaagaatattgtgatgtatcaagtgtcggttaaagtctaacattaaataaaagagtggaggttgaacaacaaataaa 27879683  T
Q  348 gtgaaaaaacacatatacttaagcctt--aaaatttggatgaagatgtggcatcattc 403  Q
     |||||| || |||||| ||| || ||  ||| ||||||||||||||||| |||||||    
T  27879684 ttgaaaatactcatatatttatgcttttaaaattttggatgaagatgtggtatcattc 27879741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 12746483 - 12746424
Alignment:
Q  247 gctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaag 306  Q
    ||||||||||| ||||| ||  |||||||||||||||||||||| |||||||||||||||    
T  12746483 gctagaatttcatcatatttaatggagagaatattgtgatgtattaagtgtcagttaaag 12746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 10976843 - 10976762
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaa 304  Q
    |||||||| || ||| ||||||| ||||||||||| ||||| |||  ||||||||||||||||||| |||||| | ||||||    
T  10976843 tatggacacccatgccaagtacgggctagaatttcgtcatatttgagggagagaatattgtgatgtttcaagtattagttaa 10976762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 323
Target Start/End: Original strand, 50239316 - 50239416
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| ||| ||||||||||| ||||  |||  ||||| |||||| ||||||||| |||||||||||||  | ||||| |||||||    
T  50239316 tatggacacccgtgccaagcacgggctagaatttcgtcatggttgagggagacaatattatgatgtatctagtgtcagttaaattcaaacatgggataaa 50239415  T
Q  323 a 323  Q
    |    
T  50239416 a 50239416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 249 - 340
Target Start/End: Original strand, 431677 - 431768
Alignment:
Q  249 tagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaa 340  Q
    ||||||||| ||||| |||  ||||| |||  | ||||||||||||||||||||||||  ||| |||| |||||| |||||||| |||||||    
T  431677 tagaatttcgtcatatttgagggagaaaatgctctgatgtatcaagtgtcagttaaagttcaatattgaataaaaaagtggaggttgaacaa 431768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 9261183 - 9261305
Alignment:
Q  270 ggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacatatacttaa 369  Q
    ||||| |||||||||||||| |||  || |||||||| |||||||  ||| |||||||| | | |||||| || |  ||||||||||| |  ||||||||    
T  9261183 ggagataatattgtgatgtagcaaaagttagttaaagtccaacatcagatgaaagagtgcaagttgaacatcaaaagagtgaaaaaactc--atacttaa 9261280  T
Q  370 gccttaaaa-tttggatgaagatgt 393  Q
    ||||||||| |||||||||| ||||    
T  9261281 gccttaaaattttggatgaaaatgt 9261305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 17763835 - 17763916
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaa 304  Q
    |||||||| |||||| ||| ||| ||||||||||| ||||| |||  | | ||||| |||||| ||||||||||||||||||    
T  17763835 tatggacacccgtgccaagcacgggctagaatttcgtcatatttgaggcaaagaatgttgtgacgtatcaagtgtcagttaa 17763916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 19065155 - 19065236
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaa 304  Q
    |||||||| |||||| ||| ||| ||||||||||| ||||| |||  | | ||||| |||||| ||||||||||||||||||    
T  19065155 tatggacacccgtgccaagcacgggctagaatttcgtcatatttgaggcaaagaatgttgtgacgtatcaagtgtcagttaa 19065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 6087995 - 6087947
Alignment:
Q  436 tcaacattgtaggggagtgggagtggttcttagtggtggatcagagaca 484  Q
    |||||||||| ||  ||||||||||||||||||||||| |||| |||||    
T  6087995 tcaacattgtgggttagtgggagtggttcttagtggtgaatcacagaca 6087947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 12125903 - 12125843
Alignment:
Q  295 tgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaa 355  Q
    ||||| |||||| | ||||||||||||||||||| ||| ||||||||| || ||| |||||    
T  12125903 tgtcacttaaagtcgaacattggataaaagagtgcaggttgaacaacaaataagtaaaaaa 12125843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 381
Target Start/End: Original strand, 13228358 - 13228518
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| ||| ||||||||||| ||||  |   ||||||||||||||||||||||||||||||| |||||   |||||||||||||     
T  13228358 tatggacacccgtgccaagcacgggctagaatttcgtcattttcaatggagagaatattgtgatgtatcaagtgtcacttaaatatcaacattggataag 13228457  T
Q  323 agagtggaggatgaacaacagatcagtgaaaa--aacacatatacttaagccttaaaattt 381  Q
    | | |||||| |||| |||| || ||||||||  ||  ||||| |||||| ||||||||||    
T  13228458 atattggaggttgaagaacaaataagtgaaaaataaatcatatccttaagtcttaaaattt 13228518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 306
Target Start/End: Original strand, 281504 - 281585
Alignment:
Q  225 tggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaag 306  Q
    |||||| |||||  ||| ||| ||||||||||| ||||| ||  ||||||| ||||||||||||||||||||| ||||||||    
T  281504 tggacacccgtgtcaagcacgggctagaatttcgtcatatttaatggagaggatattgtgatgtatcaagtgttagttaaag 281585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 403
Target Start/End: Original strand, 281670 - 281784
Alignment:
Q  292 aagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacac--atatacttaagccttaaaa-tttggatgaa 388  Q
    |||||||| ||||| | || |||||||||||| | ||||||  ||| |||| || |||||||||| ||  ||||||| ||||||||||| ||||||||||    
T  281670 aagtgtcatttaaatctcatcattggataaaatactggaggtcgaagaacaaataagtgaaaaaaaactcatatactaaagccttaaaattttggatgaa 281769  T
Q  389 gatgtggcatcattc 403  Q
    |||| | ||||||||    
T  281770 gatgcgacatcattc 281784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 402
Target Start/End: Original strand, 50814462 - 50814641
Alignment:
Q  224 atggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaa 323  Q
    ||||||| |||||| ||| ||| ||||||||||| |||| |||   ||||||||| |||| | |||| || |||  |||||| | ||| |||||||||||    
T  50814462 atggacacccgtgccaagcacgggctagaatttcgtcatccttaagggagagaatgttgtaaagtattaaatgtatgttaaatctcaatattggataaaa 50814561  T
Q  324 gagtggaggatgaacaacagatcagtgaaaaaacacatatacttaag-ccttaaaatttggatgaagatgtggcatcatt 402  Q
     | |||||| |||| |  | || |||||||| | ||| ||||||||| | ||||| |||||||||||||||  |||||||    
T  50814562 tattggaggttgaagagtaaataagtgaaaataaacacatacttaagactttaaattttggatgaagatgtaacatcatt 50814641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 39974423 - 39974496
Alignment:
Q  232 ccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaa 305  Q
    |||||| ||| ||| |||||||||||  ||||  |  ||||||||||||||||||||||||||||||| |||||    
T  39974423 ccgtgccaagcacgggctagaatttcggcatatctaatggagagaatattgtgatgtatcaagtgtcaattaaa 39974496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 306
Target Start/End: Complemental strand, 49953551 - 49953470
Alignment:
Q  225 tggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaag 306  Q
    |||||| |||||||||| | | | ||||||||| ||||| ||  |||| |||||||||||||||||||||| | ||||||||    
T  49953551 tggacacccgtgctaagcatgggttagaatttcgtcatatttaatggaaagaatattgtgatgtatcaagtattagttaaag 49953470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 512
Target Start/End: Original strand, 35308125 - 35308203
Alignment:
Q  433 ggttcaacattgtaggggagtgggagtggttcttagtggtggatcagagacaaggagagtctcatacttaatagagagat 512  Q
    |||||||| ||||||||||| ||||||| ||||  ||||||||||| ||||| | ||||||| | ||||||| |||||||    
T  35308125 ggttcaacgttgtaggggagcgggagtg-ttctaggtggtggatcacagacacgaagagtctgacacttaatggagagat 35308203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 403
Target Start/End: Complemental strand, 22636655 - 22636534
Alignment:
Q  283 tgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacatatacttaagccttaaaa-ttt 381  Q
    |||||||| |||||||||||||||||| ||||||||||| | ||||||   | ||||||| || ||||||||  | ||||||||||| |||||||| |||    
T  22636655 tgatgtatgaagtgtcagttaaagcccgacattggataacatagtggactttaaacaacaaataagtgaaaatgctcatatacttaatccttaaaatttt 22636556  T
Q  382 ggatgaagatgtggcatcattc 403  Q
    |||| ||||||||| |||||||    
T  22636555 ggataaagatgtggtatcattc 22636534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 272 - 393
Target Start/End: Complemental strand, 43387470 - 43387346
Alignment:
Q  272 agagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaa--aacacatatacttaa 369  Q
    |||||||||||||||| ||||||||||| |||||   |||| |||||||||| | |||||| |||| |||| || ||||||||  ||  |||||||||||    
T  43387470 agagaatattgtgatgcatcaagtgtcaattaaatttcaacgttggataaaatattggaggttgaagaacatataagtgaaaaataaatcatatacttaa 43387371  T
Q  370 gccttaaaa-tttggatgaagatgt 393  Q
    | ||||||| |||||||||||||||    
T  43387370 gtcttaaaattttggatgaagatgt 43387346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 31090705 - 31090578
Alignment:
Q  248 ctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatca 347  Q
    |||||||||  ||| |||||  ||||||||||||||  ||||| |||||| | |||||  |||||||| ||||||||| || ||| |||| || | ||      
T  31090705 ctagaattttgtcacacttgagggagagaatattgtattgtataaagtgtaaattaaaatccaacattagataaaagactgaaggttgaataataaatac 31090606  T
Q  348 gtgaaaaaacacatatacttaagcctta 375  Q
    |||||||||| ||||||| |||||||||    
T  31090605 gtgaaaaaactcatatacgtaagcctta 31090578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 964249 - 964204
Alignment:
Q  173 acgtggaatgaagcatgacaatttaacgtttgaaatataataaata 218  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  964249 acgtgcaatgaagcatggcaatttaacttttgaaatataataaata 964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 323
Target Start/End: Complemental strand, 45920737 - 45920631
Alignment:
Q  216 atacaaatatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacatt 315  Q
    |||| |||||||| ||||||||||||||||   || |||||| ||||| |||  ||||| |||||| ||||||||  |||||||||||||  | |||||     
T  45920737 atactaatatgga-atccgtgctaagtacggattacaatttcgtcatagttgagggagacaatattatgatgtatttagtgtcagttaaattcaaacatg 45920639  T
Q  316 ggataaaa 323  Q
    ||||||||    
T  45920638 ggataaaa 45920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 514
Target Start/End: Complemental strand, 8313540 - 8313461
Alignment:
Q  434 gttcaacattgtaggggagtgggagtggttcttagtggtggatcagagacaaggagagtctcatacttaatagagagatgt 514  Q
    ||||||| ||||| ||||||||||||| ||||  |||||||||||   ||| ||||||||| | ||||||| |||||||||    
T  8313540 gttcaacgttgtaagggagtgggagtg-ttctaggtggtggatcacgaacacggagagtctgacacttaatggagagatgt 8313461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 357
Target Start/End: Original strand, 47782907 - 47782987
Alignment:
Q  277 atattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaac 357  Q
    |||||||||| ||||||||||||||||  | | ||||||| ||| |||||| || | ||||||||| ||  ||||||||||    
T  47782907 atattgtgatttatcaagtgtcagttacggtctaacattgaatataagagttgaagttgaacaacaaataggtgaaaaaac 47782987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 232 - 393
Target Start/End: Original strand, 45658162 - 45658322
Alignment:
Q  232 ccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggag 331  Q
    |||||||||| ||| ||||||||||| ||| ||||   ||||| |||||||||||||| |||  ||||||||||| |||||||  ||| |||||||| |     
T  45658162 ccgtgctaagcacgggctagaatttcatcaaacttaaaggagataatattgtgatgtagcaaaagtcagttaaagtccaacatcagatgaaagagtgcaa 45658261  T
Q  332 gatgaacaacagatcagtgaaaaaacacatatacttaagccttaaaa-tttggatgaagatgt 393  Q
    | |||||| || |  ||||||||||| |  ||||||||||||||||| |||||||||| ||||    
T  45658262 gttgaacatcaaaagagtgaaaaaactc--atacttaagccttaaaattttggatgaaaatgt 45658322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 223 - 402
Target Start/End: Complemental strand, 3395872 - 3395691
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| ||| ||||||||| | ||||  |   |||||||||||| ||||| ||||||||||||||||||   ||||||||||||||    
T  3395872 tatggacacccgtgccaagcacgggctagaattacgtcattttcaatggagagaatat-gtgatatatcaagtgtcagttaaatatcaacattggataaa 3395774  T
Q  323 agagtggaggatgaacaacagatcagtgaaaa--aacacatatacttaagccttaaaa-tttggatgaagatgtggcatcatt 402  Q
    | | |||||| |||| |||| || ||| ||||  ||  |||||||||||| ||||||| |||||||||| ||||  |||||||    
T  3395773 atattggaggttgaagaacaaataagtaaaaaataaatcatatacttaagtcttaaaattttggatgaaaatgtaacatcatt 3395691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 5789244 - 5789163
Alignment:
Q  274 agaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaa 355  Q
    |||||||||| ||||||||||||||||||||| | ||| ||||||||||| | |||||| |||| |||| || |||||||||    
T  5789244 agaatattgtaatgtatcaagtgtcagttaaatctcaatattggataaaacattggaggttgaagaacaaataagtgaaaaa 5789163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 402
Target Start/End: Complemental strand, 41754794 - 41754613
Alignment:
Q  224 atggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaa 323  Q
    ||||||| |||||| ||| ||| ||||||||||| |||| |||   ||||||||| |||| | |||| || |||  |||||| | ||| |||||||||||    
T  41754794 atggacacccgtgccaagcacgggctagaatttcgtcatccttaagggagagaatgttgtaaagtattaaatgtatgttaaatctcaatattggataaaa 41754695  T
Q  324 gagtggaggatgaacaacagatcagtgaaa--aaacacatatacttaag-ccttaaaatttggatgaagatgtggcatcatt 402  Q
     | |||||| |||| |  | || |||||||  |||| |||||||||||| | ||||| |||||||||||||||  |||||||    
T  41754694 tattggaggttgaagagtaaataagtgaaaataaactcatatacttaagactttaaattttggatgaagatgtaacatcatt 41754613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 381
Target Start/End: Original strand, 14868495 - 14868651
Alignment:
Q  224 atggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaa 323  Q
    ||||| |||||||| ||| ||| | ||||||| | ||| ||||   ||||| |||||||||||||| |||  ||||||||||| |||||||   || |||    
T  14868495 atggaaatccgtgccaagcacgggttagaattccatcaaacttaaaggagataatattgtgatgtagcaaaagtcagttaaagtccaacatcatatgaaa 14868594  T
Q  324 gagtggaggatgaacaacagatcagtgaaaaaacacatatacttaagccttaaaattt 381  Q
    ||||| | | |||||| || |  |||||||||| ||  ||||||||||||||||||||    
T  14868595 gagtgcaagttgaacatcaaaagagtgaaaaaa-actcatacttaagccttaaaattt 14868651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 10999594 - 10999562
Alignment:
Q  273 gagaatattgtgatgtatcaagtgtcagttaaa 305  Q
    |||||||||||||||||||||||||||||||||    
T  10999594 gagaatattgtgatgtatcaagtgtcagttaaa 10999562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 2593361 - 2593294
Alignment:
Q  225 tggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatca 292  Q
    |||||| |||||| ||| ||| ||||||||||||  |||||||  |||||||||||| ||||||||||    
T  2593361 tggacacccgtgccaagcacgggctagaatttccatatacttgagggagagaatattttgatgtatca 2593294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 36049393 - 36049346
Alignment:
Q  168 gtagaacgtggaatgaagcatgacaatttaacgtttgaaatataataa 215  Q
    |||| ||||| ||||||||||| ||||||||| |||||||||||||||    
T  36049393 gtagcacgtgcaatgaagcatggcaatttaacttttgaaatataataa 36049346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 39406286 - 39406223
Alignment:
Q  269 tggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggagg 332  Q
    ||||||||||||| ||||||||  || ||||||||||||  |||||| ||||||| ||||||||    
T  39406286 tggagagaatattatgatgtattgagagtcagttaaagctaaacatttgataaaacagtggagg 39406223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 403
Target Start/End: Original strand, 36719762 - 36719930
Alignment:
Q  235 tgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggat 334  Q
    ||||||| ||| ||||| ||||  ||||| |||  |||||  |||||||||||||| |||||| | |||||| || |||||| ||| ||||||  ||| |    
T  36719762 tgctaagcacgggctagcattttgtcatatttgagggagacgatattgtgatgtat-aagtgtgatttaaagtcccacattgaatataagagtataggtt 36719860  T
Q  335 gaacaacagatcagtgaaaaaacacatatacttaagccttaaaat-ttggatgaagatgtggcatcattc 403  Q
    |||||||| || || |||| |||  ||||||| | || ||||||  |||||||||||||||  |||||||    
T  36719861 gaacaacaaataagggaaacaacttatatactcaggctttaaaaagttggatgaagatgtgatatcattc 36719930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 230 - 327
Target Start/End: Original strand, 14373559 - 14373656
Alignment:
Q  230 atccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagt 327  Q
    |||||||||||| ||| ||||||||||| | ||||||   | | ||||||||||||| |||||||||||  ||||||| |||||||||||||||||||    
T  14373559 atccgtgctaagcacgggctagaatttcgttatacttaaggtaaagaatattgtgatttatcaagtgtcgtttaaagctcaacattggataaaagagt 14373656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 355
Target Start/End: Complemental strand, 10901737 - 10901615
Alignment:
Q  234 gtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtg-tcagttaaagcccaacattggataaaagagtggagg 332  Q
    |||| ||| ||| ||||||||||| |||| ||   ||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||| | ||||||    
T  10901737 gtgccaagcacgggctagaatttcgtcatcctcaatggagagaatattgtaatgtatcaagtgttcagttaaatctcaacattggataaaatattggagg 10901638  T
Q  333 atgaacaacagatcagtgaaaaa 355  Q
     |||| |||| || | |||||||    
T  10901637 ttgaagaacatataaatgaaaaa 10901615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 16221975 - 16221875
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    ||||||||  ||||||||| ||| ||||||||||| ||||| |||  ||||| |||||| ||||||||| |||||||||||||  | ||||| |||||||    
T  16221975 tatggacactcgtgctaagcacgggctagaatttcgtcatagttgagggagacaatattatgatgtatctagtgtcagttaaattcaaacatgggataaa 16221876  T
Q  323 a 323  Q
    |    
T  16221875 a 16221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 757816 - 757931
Alignment:
Q  272 agagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacatatacttaagc 371  Q
    ||||||||| ||||| |||||||||||| ||||| | ||||||||||| ||||| |||||| |||||||||  | |||| ||||||  |||||||||| |    
T  757816 agagaatatcgtgatttatcaagtgtcaattaaaacgcaacattggattaaaga-tggaggttgaacaacaattaagtg-aaaaacttatatacttaaac 757913  T
Q  372 ctt-aaaatttggatgaa 388  Q
     || ||||||||||||||    
T  757914 tttaaaaatttggatgaa 757931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 403
Target Start/End: Original strand, 38290272 - 38290405
Alignment:
Q  271 gagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacatatacttaag 370  Q
    ||||||||||||| ||||||||||||||   |||| || ||||||| |||||||| |||||  ||||||||| || |||  |||||  ||||||  || |    
T  38290272 gagagaatattgtaatgtatcaagtgtcgactaaatccaaacattgaataaaagactggagattgaacaacaaataagtacaaaaattcatataactatg 38290371  T
Q  371 ccttaaaa-tttggatgaagatgtggcatcattc 403  Q
      |||||| ||||||||||||||||| |||||||    
T  38290372 gtttaaaattttggatgaagatgtggtatcattc 38290405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 21589349 - 21589269
Alignment:
Q  225 tggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaa 305  Q
    |||||| |||||| ||| ||| |||||||||||  ||||  |  ||||||||||||||||| |||||||||||||||||||    
T  21589349 tggacacccgtgccaagcacgggctagaatttcggcatatctaatggagagaatattgtgacgtatcaagtgtcagttaaa 21589269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 41529118 - 41529018
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| ||| ||||||||||| ||||| | |  ||||| |||||| ||||||||| |||||||||||||  | ||||| |||||||    
T  41529118 tatggacacccgtgccaagcacgggctagaatttcgtcatagtcgagggagacaatattatgatgtatctagtgtcagttaaattcaaacatgggataaa 41529019  T
Q  323 a 323  Q
    |    
T  41529018 a 41529018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 40114532 - 40114432
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| ||| | ||||||||| ||||| |||  ||||| |||||| ||||||||  |||||||||||||  | ||||| |||||||    
T  40114532 tatggacacccgtgccaagcacgggttagaatttcgtcatagttgagggagacaatattatgatgtatttagtgtcagttaaattcaaacatgggataaa 40114433  T
Q  323 a 323  Q
    |    
T  40114432 a 40114432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 15630203 - 15630351
Alignment:
Q  232 ccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggag 331  Q
    |||||| ||| ||| ||||||||| | ||| ||||   ||||| |||||||||||||| |||  |||| |||||| |||||||  ||| |||||||| |     
T  15630203 ccgtgccaagcacgtgctagaattccgtcaaacttaaaggagataatattgtgatgtagcaaaagtcacttaaagtccaacatcagatgaaagagtgcaa 15630302  T
Q  332 gatgaacaacagatcagtgaaaaaacacatatacttaagccttaaaattt 381  Q
    | |||||| || |  |||||||||| ||  |||||||||| |||||||||    
T  15630303 gttgaacatcaaaagagtgaaaaaa-actcatacttaagcgttaaaattt 15630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 513
Target Start/End: Complemental strand, 18431779 - 18431698
Alignment:
Q  432 cggttcaacattgtaggggagtgggagtggttcttagtggtggatcagagacaaggagagtctcatacttaatagagagatg 513  Q
    |||||||||||| | |||||||| ||||||||||| ||||| |||||  | || | ||||||| | ||||||| ||||||||    
T  18431779 cggttcaacattttgggggagtgagagtggttcttggtggtcgatcacgggcacgtagagtctaacacttaatggagagatg 18431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 328
Target Start/End: Complemental strand, 18432563 - 18432458
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| ||| ||||||||||  ||||||||  |||||| ||||||  |||| | ||| | |||||||||| | ||| ||| |||||    
T  18432563 tatggacacccgtgccaagcacgggctagaattttgtcatacttaatggagataatatttagatggaacaaatctcagttaaagtcgaacgttgaataaa 18432464  T
Q  323 agagtg 328  Q
    ||||||    
T  18432463 agagtg 18432458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 24681286 - 24681327
Alignment:
Q  78 aagaataatggcttaaaaatagctaacaaaaagaacgttatg 119  Q
    |||||||||| |||| |||||||||| |||||||||||||||    
T  24681286 aagaataatgccttataaatagctaataaaaagaacgttatg 24681327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 224 - 402
Target Start/End: Complemental strand, 23142217 - 23142035
Alignment:
Q  224 atggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaa 323  Q
    ||||||| |||||| ||| ||| ||||||||||| |||| |||   |||||||||||| | | |||| || |||  |||||| | ||| |||||||||||    
T  23142217 atggacacccgtgccaagcacgggctagaatttcgtcatccttaagggagagaatattttaaagtattaaatgtatgttaaatctcaatattggataaaa 23142118  T
Q  324 gagtggaggatgaacaacagatcagtgaa---aaaacacatatacttaag-ccttaaaatttggatgaagatgtggcatcatt 402  Q
     | |||||| |||| |  | || ||||||   ||||| || ||||||||| | ||||| |||||||||||||||  |||||||    
T  23142117 tattggaggttgaagagtaaataagtgaaaataaaactcaaatacttaagactttaaattttggatgaagatgtaacatcatt 23142035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 355
Target Start/End: Complemental strand, 35227040 - 35226908
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||| ||| |||||||| ||||||||||||||| ||| || ||    ||| ||| ||||| ||||||||||||| | || || |||||||||  |  |    
T  35227040 tatggatatcagtgctaagcacgagctagaatttcgtcaaacatgacaaagataatcttgtggtgtatcaagtgtcggctacagtccaacattgagtgga 35226941  T
Q  323 agagtggaggatgaacaacagatcagtgaaaaa 355  Q
    |||||| ||| |||| |||| || |||||||||    
T  35226940 agagtgaaggttgaataacatataagtgaaaaa 35226908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 2013 - 2096
Alignment:
Q  272 agagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaa 355  Q
    ||||||||| ||||| |||||||||||||||||||  ||||||||||| ||||| |||||| |||||||||  | |||||||||    
T  2013 agagaatatcgtgatttatcaagtgtcagttaaagtgcaacattggattaaagaatggaggttgaacaacaattaagtgaaaaa 2096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 33617 - 33536
Alignment:
Q  274 agaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaa 355  Q
    |||||||||| ||||||||||||||||||||| | ||| ||||||||||| | |||||| |||| |||| || |||||||||    
T  33617 agaatattgtaatgtatcaagtgtcagttaaatctcaatattggataaaacattggaggttgaagaacaaataagtgaaaaa 33536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 24174699 - 24174819
Alignment:
Q  274 agaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacatatacttaagcct 373  Q
    |||||||||||||||||||||||| | |||||| ||||||||| ||| || || | | | ||||||||| || || | ||||||  ||||||||||| ||    
T  24174699 agaatattgtgatgtatcaagtgtgaattaaagtccaacattgaatataaaagcgtaagttgaacaacaaataagag-aaaaacttatatacttaagtct 24174797  T
Q  374 taaaat-ttggatgaagatgtg 394  Q
    |||||| |||||||||||||||    
T  24174798 taaaatgttggatgaagatgtg 24174819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 26894632 - 26894728
Alignment:
Q  246 agctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaaca 342  Q
    |||||||||||| ||||  |||  |||||||||||||||||||| ||| ||| ||||||| | ||||||||||||||| | |||||| |||| ||||    
T  26894632 agctagaatttcgtcatctttgaaggagagaatattgtgatgtaacaactgttagttaaacctcaacattggataaaatattggaggttgaagaaca 26894728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 514
Target Start/End: Original strand, 26894839 - 26894918
Alignment:
Q  435 ttcaacattgtaggggagtgggagtggttcttagtggtggatcagagacaaggagagtctcatacttaatagagagatgt 514  Q
    ||||||||| ||||||||||| |||||||| | |||||||||   ||||| ||| ||||||||||||||| |||||||||    
T  26894839 ttcaacattttaggggagtggaagtggttcatggtggtggattgcagacacggatagtctcatacttaatggagagatgt 26894918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 6836641 - 6836577
Alignment:
Q  275 gaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaaca 339  Q
    |||||||||||| ||| | |||| ||||||| ||||||||||||| ||||| |||||| ||||||    
T  6836641 gaatattgtgatttattatgtgttagttaaatcccaacattggattaaagaatggaggttgaaca 6836577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 402
Target Start/End: Original strand, 1594508 - 1594666
Alignment:
Q  247 gctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatc 346  Q
    ||||||||||| |||| |||   |||||||||||||| | |||| || |||  |||||| | ||| ||||||||||| | |||||| |||| |  | ||     
T  1594508 gctagaatttcgtcatccttaagggagagaatattgtaaagtattaaatgtatgttaaatctcaatattggataaaatattggaggttgaatagtaaata 1594607  T
Q  347 agtgaaa--aaacacatatacttaag-ccttaaaatttggatgaagatgtggcatcatt 402  Q
    |||||||  |||| |||||||||||| | ||||| |||||||||||||||  |||||||    
T  1594608 agtgaaaataaactcatatacttaagactttaaattttggatgaagatgtaacatcatt 1594666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 2976445 - 2976528
Alignment:
Q  274 agaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaac 357  Q
    ||||||||||| |||||||| ||| | ||||||  ||||||||||| ||||| |||| |  |||||||| || |||||||||||    
T  2976445 agaatattgtgttgtatcaaatgttaattaaagttcaacattggatgaaagaatggaagtggaacaacaaataagtgaaaaaac 2976528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 368
Target Start/End: Complemental strand, 3532437 - 3532317
Alignment:
Q  247 gctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatc 346  Q
    ||||||||||| |||||  || |||||| |||  |||||||||| ||||||| | || || |||||||||  || ||| ||||||| ||||||||| |      
T  3532437 gctagaatttcttcatatatgatggagataatcatgtgatgtat-aagtgtcggctacagtccaacattgactataagcgtggaggttgaacaacataaa 3532339  T
Q  347 agtgaaaaaacacatatactta 368  Q
    ||||||||||| |||| |||||    
T  3532338 agtgaaaaaactcatacactta 3532317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 20873525 - 20873650
Alignment:
Q  270 ggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacat-atactta 368  Q
    |||||||||||| ||||||||  ||  ||||||||| |  |||||||||||||| |||||||| |||  |||| || |||| ||||| | ||  ||| ||    
T  20873525 ggagagaatattatgatgtattgagcatcagttaaaactaaacattggataaaatagtggaggttgattaacaaataagtggaaaaaaaaatcgtacgta 20873624  T
Q  369 agccttaaaattt-ggatgaagatgt 393  Q
    ||| ||||||||| ||||||||||||    
T  20873625 agcattaaaatttgggatgaagatgt 20873650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 323
Target Start/End: Original strand, 34478 - 34578
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||  ||| ||| ||||||||||| ||||| ||| |||||| |||||| ||||||||| |||||||||||||  | ||||| |||||||    
T  34478 tatggacacccgtgtcaagcacgggctagaatttcgtcatagttgatggagacaatattatgatgtatctagtgtcagttaaattcaaacatgggataaa 34577  T
Q  323 a 323  Q
    |    
T  34578 a 34578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 24708151 - 24708201
Alignment:
Q  273 gagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaa 323  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  24708151 gagaatattgtgatatattaagtgtcagttaaagtccaacattggataaaa 24708201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 402
Target Start/End: Complemental strand, 6679644 - 6679463
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||||| |||| ||  ||| ||||||||||| ||||  |||  |||||||||||| |||||||| ||| || |||||||||  |||||| ||||||    
T  6679644 tatggacatctgtgccaaacacgggctagaatttcatcattgttgagggagagaatattatgatgtattaagagttagttaaagctaaacatttgataaa 6679545  T
Q  323 agagtggaggatgaacaacagatcagtgaaaaaacacat-atacttaagccttaaaattt-ggatgaagatgtggcatcatt 402  Q
    | || ||||| |||  |||| || |||| ||||| | || || ||||||| ||| ||||| |||||||||||| | ||||||    
T  6679544 acagcggaggttgattaacaaataagtggaaaaaaaaatcatgcttaagcattacaatttgggatgaagatgtagtatcatt 6679463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 3343688 - 3343746
Alignment:
Q  271 gagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtgg 329  Q
    ||||||||||||||||||||||| | ||  |||||| | ||||||||||||||||||||    
T  3343688 gagagaatattgtgatgtatcaaatatcgattaaagtctaacattggataaaagagtgg 3343746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 514
Target Start/End: Complemental strand, 38789093 - 38789013
Alignment:
Q  433 ggttcaacattgtaggggagtgggagtggttcttagtggtggatcagagacaaggagagtctcatacttaatagagagatgt 514  Q
    |||||||| ||||||||||| ||||||| ||||  ||||||||||| | ||| ||||||||| | ||||||| |||||||||    
T  38789093 ggttcaacgttgtaggggagcgggagtg-ttctaggtggtggatcacaaacacggagagtctgacacttaatggagagatgt 38789013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 402
Target Start/End: Complemental strand, 15721614 - 15721456
Alignment:
Q  247 gctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatc 346  Q
    ||||||||||| |||| |||   |||||||||||||| | |||| || |||  |||||| | ||| ||||||||||| | |||||| |||| |  | ||     
T  15721614 gctagaatttcgtcatccttaagggagagaatattgtaaagtattaaatgtatgttaaatctcaatattggataaaatattggaggttgaatagtaaata 15721515  T
Q  347 agtgaaa--aaacacatatacttaag-ccttaaaatttggatgaagatgtggcatcatt 402  Q
    |||||||  |||| |||||||||||| | ||||| |||||||||||||||  |||||||    
T  15721514 agtgaaaataaactcatatacttaagactttaaattttggatgaagatgtaacatcatt 15721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 478
Target Start/End: Complemental strand, 17510369 - 17510326
Alignment:
Q  435 ttcaacattgtaggggagtgggagtggttcttagtggtggatca 478  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||    
T  17510369 ttcaacattttaggggagtgggagtggttcttggtggtcgatca 17510326  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 478
Target Start/End: Original strand, 17542845 - 17542888
Alignment:
Q  435 ttcaacattgtaggggagtgggagtggttcttagtggtggatca 478  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||    
T  17542845 ttcaacattttaggggagtgggagtggttcttggtggtcgatca 17542888  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 3345692 - 3345790
Alignment:
Q  271 gagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaagagtggaggatgaacaacagatcagtgaaaaaacacatatacttaa 369  Q
    ||||||||||||||||||||||| | ||  |||||| | | ||||| ||||||||||||  |  |||||||| ||   ||||||||| |||||||||||    
T  3345692 gagagaatattgtgatgtatcaaatatcgattaaagtctagcattgaataaaagagtgggagtggaacaacaaatacatgaaaaaactcatatacttaa 3345790  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 29502551 - 29502467
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagc 307  Q
    |||||||| |||||| ||| ||| ||||||||||| ||||||||   ||| |  ||||||||||||||||| | ||| |||||||    
T  29502551 tatggacacccgtgccaagcacgggctagaatttcgtcatacttaagggaaatgatattgtgatgtatcaaatttcatttaaagc 29502467  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 42080633 - 42080549
Alignment:
Q  232 ccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattg 316  Q
    |||||| ||||||| |||| |||||  ||||| |||  ||||||||| || ||||||||||||||||| ||| || |||| ||||    
T  42080633 ccgtgccaagtacgggctataatttagtcatatttgaaggagagaatgttatgatgtatcaagtgtcatttatagtccaaaattg 42080549  T

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Target: scaffold0191 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 377
Target Start/End: Original strand, 4823 - 4976
Alignment:
Q  224 atggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaaa 323  Q
    |||||||||||||| ||| ||| ||||||||| | ||| ||||   ||| |  ||||||||||||| |||  |||||||||||  ||||||| ||| |||    
T  4823 atggacatccgtgccaagcacgggctagaattccgtcaaacttaagggacatgatattgtgatgtagcaaaagtcagttaaagttcaacattagatgaaa 4922  T
Q  324 gagtggaggatgaacaacagatcagtgaaaaaacacatatacttaagccttaaa 377  Q
    ||||| ||| |||||| || |  ||||| |||| |   ||||||||||||||||    
T  4923 gagtgcaggttgaacatcaaaagagtgagaaaaaaatcatacttaagccttaaa 4976  T

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Target: scaffold0284 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 3081 - 2981
Alignment:
Q  223 tatggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattggataaa 322  Q
    |||||||| |||||| ||| ||| ||||||||||| ||| | |||  | ||| |||||| ||||||||| |||||||||||||  | ||||| |||||||    
T  3081 tatggacacccgtgccaagcacgggctagaatttcgtcaaagttgaggtagacaatattatgatgtatctagtgtcagttaaattcaaacatgggataaa 2982  T
Q  323 a 323  Q
    |    
T  2981 a 2981  T

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Target: scaffold2098 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 304
Target Start/End: Original strand, 32 - 65
Alignment:
Q  271 gagagaatattgtgatgtatcaagtgtcagttaa 304  Q
    ||||||||||||||||||||||||||| ||||||    
T  32 gagagaatattgtgatgtatcaagtgttagttaa 65  T

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Target: scaffold1590 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 304
Target Start/End: Original strand, 1499 - 1532
Alignment:
Q  271 gagagaatattgtgatgtatcaagtgtcagttaa 304  Q
    ||||||||||||||||||||||||||| ||||||    
T  1499 gagagaatattgtgatgtatcaagtgttagttaa 1532  T

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Target: scaffold0377 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 15467 - 15383
Alignment:
Q  232 ccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaaagcccaacattg 316  Q
    |||||| ||||||| |||| |||||  ||||| |||  ||||||||| || ||||||||||||||||| ||| || |||| ||||    
T  15467 ccgtgccaagtacgggctataatttagtcatatttgaaggagagaatgttatgatgtatcaagtgtcatttatagtccaaaattg 15383  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 129430 - 129350
Alignment:
Q  224 atggacatccgtgctaagtacgagctagaatttcctcatacttggtggagagaatattgtgatgtatcaagtgtcagttaa 304  Q
    ||||||| |||||| ||| ||  |||| |||||| ||||| |||   ||||||||||||||||||||||||| | ||||||    
T  129430 atggacacccgtgccaagcactggctaaaatttcgtcatatttgagcgagagaatattgtgatgtatcaagtattagttaa 129350  T

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