View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2179R-Insertion-8 (Length: 282)

Name: NF2179R-Insertion-8
Description: NF2179R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2179R-Insertion-8
NF2179R-Insertion-8
[»] chr2 (1 HSPs)
chr2 (9-282)||(19172365-19172638)


Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 9 - 282
Target Start/End: Complemental strand, 19172638 - 19172365
Alignment:
Q  9 gtccattcaaagaatactacacagaatggttcaacacactcaagaacaatcacctcccattactccgtcgttctatctccggcgcctccttaaccctcct 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19172638 gtccattcaaagaatactacacagaatggttcaacacactcaagaacaatcacctcccattactccgtcgttctatctccggcgactccttaaccctcct 19172539  T
Q  109 ctcaactcacgttgagctcatccaccaacacttccaatcttactaccacaccctcgacgcagctgcaaccacagacccttctcaaatcctcaaccaagac 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19172538 ctcaactcacgttgagctcatccaccaacacttccaatcttactaccacaccctcgacgcagctgcaatcacagacccttctcaaatcctcaaccaagac 19172439  T
Q  209 tggcataactccttagaaaagcctcttctttggatctctgacctccatcctttcatcttcaccaatcttgctcg 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19172438 tggcataactccttagaaaagcctcttctttggatctctgacctccatcctttcatcttcaccaatcttgctcg 19172365  T

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