View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2179_low_10 (Length: 273)

Name: NF2179_low_10
Description: NF2179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2179_low_10
NF2179_low_10
[»] chr5 (21 HSPs)
chr5 (1-262)||(6415585-6415845)
chr5 (116-230)||(6415742-6415856)
chr5 (116-183)||(24270005-24270072)
chr5 (116-183)||(24346636-24346703)
chr5 (116-183)||(95401-95468)
chr5 (1-64)||(6413568-6413631)
chr5 (116-183)||(41666892-41666959)
chr5 (116-183)||(43117764-43117831)
chr5 (125-183)||(15480439-15480497)
chr5 (127-183)||(17150379-17150435)
chr5 (1-64)||(95412-95475)
chr5 (116-183)||(8081249-8081316)
chr5 (116-183)||(18333599-18333666)
chr5 (1-64)||(24270016-24270079)
chr5 (1-64)||(24346647-24346710)
chr5 (1-63)||(8081260-8081322)
chr5 (1-63)||(15590049-15590111)
chr5 (116-178)||(33337373-33337435)
chr5 (1-62)||(41666903-41666964)
chr5 (1-57)||(17352580-17352636)
chr5 (1-57)||(18333610-18333666)
[»] chr6 (18 HSPs)
chr6 (116-182)||(3680130-3680196)
chr6 (116-182)||(17147795-17147861)
chr6 (116-183)||(4868712-4868779)
chr6 (116-183)||(13353318-13353385)
chr6 (1-56)||(33494657-33494712)
chr6 (116-183)||(33796443-33796510)
chr6 (116-182)||(33631705-33631771)
chr6 (1-70)||(17147806-17147875)
chr6 (1-56)||(3680130-3680185)
chr6 (120-183)||(12330083-12330146)
chr6 (1-64)||(12330090-12330153)
chr6 (1-64)||(13353311-13353374)
chr6 (1-64)||(33796436-33796499)
chr6 (116-182)||(6400755-6400821)
chr6 (138-187)||(28648870-28648919)
chr6 (1-57)||(4868723-4868779)
chr6 (126-178)||(6542853-6542905)
chr6 (5-73)||(12648501-12648569)
[»] chr4 (23 HSPs)
chr4 (116-255)||(35819028-35819163)
chr4 (116-183)||(28245661-28245728)
chr4 (1-64)||(35819039-35819102)
chr4 (116-190)||(35796877-35796951)
chr4 (116-184)||(50543465-50543533)
chr4 (116-183)||(22231208-22231275)
chr4 (1-64)||(28245672-28245735)
chr4 (1-65)||(5398621-5398685)
chr4 (116-183)||(5398610-5398677)
chr4 (116-183)||(6666535-6666602)
chr4 (125-184)||(7572616-7572675)
chr4 (1-64)||(22231219-22231282)
chr4 (116-183)||(35788777-35788844)
chr4 (1-64)||(35796888-35796951)
chr4 (140-183)||(36686065-36686108)
chr4 (116-183)||(40717341-40717408)
chr4 (140-190)||(6778602-6778652)
chr4 (1-31)||(21750188-21750218)
chr4 (137-183)||(25324190-25324236)
chr4 (1-59)||(50543476-50543534)
chr4 (119-183)||(11036649-11036713)
chr4 (1-57)||(35645311-35645367)
chr4 (1-57)||(35645600-35645656)
[»] chr2 (21 HSPs)
chr2 (112-183)||(17525230-17525301)
chr2 (116-255)||(15124683-15124818)
chr2 (1-64)||(15124694-15124757)
chr2 (116-183)||(16419384-16419451)
chr2 (116-190)||(44404061-44404136)
chr2 (116-184)||(5711574-5711642)
chr2 (112-184)||(31001879-31001951)
chr2 (1-64)||(17525245-17525308)
chr2 (116-183)||(40379344-40379411)
chr2 (1-62)||(5711585-5711646)
chr2 (1-57)||(17719517-17719573)
chr2 (116-183)||(2029886-2029953)
chr2 (116-175)||(14466310-14466369)
chr2 (1-64)||(16419377-16419440)
chr2 (1-64)||(37812414-37812477)
chr2 (112-178)||(33606185-33606251)
chr2 (116-181)||(16533431-16533496)
chr2 (126-183)||(17719517-17719574)
chr2 (111-159)||(878032-878080)
chr2 (1-57)||(40379355-40379411)
chr2 (1-64)||(44404072-44404136)
[»] chr8 (30 HSPs)
chr8 (116-190)||(3157144-3157218)
chr8 (1-64)||(3157155-3157218)
chr8 (116-183)||(31197731-31197798)
chr8 (116-183)||(35682916-35682983)
chr8 (116-190)||(3157459-3157533)
chr8 (1-67)||(15042795-15042861)
chr8 (1-57)||(5675880-5675936)
chr8 (1-64)||(3157470-3157533)
chr8 (116-183)||(11232329-11232396)
chr8 (116-183)||(18004229-18004296)
chr8 (1-64)||(18004240-18004303)
chr8 (116-183)||(39052672-39052739)
chr8 (116-183)||(41790775-41790842)
chr8 (135-255)||(8716163-8716280)
chr8 (122-190)||(7669529-7669597)
chr8 (1-57)||(7669536-7669592)
chr8 (116-180)||(39052829-39052893)
chr8 (116-183)||(5675869-5675936)
chr8 (112-183)||(8466619-8466690)
chr8 (1-64)||(11232340-11232403)
chr8 (116-183)||(20301378-20301445)
chr8 (116-183)||(21088010-21088077)
chr8 (1-64)||(31197724-31197787)
chr8 (1-64)||(35682927-35682990)
chr8 (116-183)||(39960074-39960141)
chr8 (116-190)||(5932084-5932158)
chr8 (116-190)||(10615504-10615578)
chr8 (119-183)||(422356-422420)
chr8 (125-193)||(15042793-15042861)
chr8 (1-57)||(39052683-39052739)
[»] chr1 (23 HSPs)
chr1 (116-190)||(34264621-34264695)
chr1 (1-64)||(25713268-25713331)
chr1 (116-182)||(33156852-33156918)
chr1 (116-188)||(17208666-17208738)
chr1 (116-183)||(25713275-25713342)
chr1 (116-179)||(35772150-35772213)
chr1 (1-64)||(39348263-39348326)
chr1 (2-56)||(30369953-30370007)
chr1 (116-179)||(369752-369816)
chr1 (116-183)||(26177025-26177092)
chr1 (5-56)||(33156852-33156903)
chr1 (1-64)||(35772139-35772202)
chr1 (116-183)||(39348252-39348319)
chr1 (116-183)||(52961464-52961531)
chr1 (116-190)||(4112675-4112749)
chr1 (116-190)||(4112906-4112980)
chr1 (1-50)||(7653365-7653414)
chr1 (116-189)||(25145620-25145693)
chr1 (1-64)||(369741-369805)
chr1 (137-193)||(5109357-5109413)
chr1 (135-183)||(16163050-16163098)
chr1 (120-184)||(26173360-26173424)
chr1 (116-184)||(27413463-27413531)
[»] scaffold0003 (4 HSPs)
scaffold0003 (116-193)||(87709-87786)
scaffold0003 (8-67)||(87727-87786)
scaffold0003 (135-182)||(102296-102343)
scaffold0003 (8-56)||(102295-102343)
[»] chr3 (21 HSPs)
chr3 (116-255)||(20327749-20327884)
chr3 (140-255)||(37246777-37246888)
chr3 (116-183)||(13574820-13574887)
chr3 (112-183)||(16239709-16239780)
chr3 (116-183)||(34992723-34992790)
chr3 (116-190)||(49629715-49629790)
chr3 (1-67)||(4155431-4155497)
chr3 (116-255)||(4155373-4155508)
chr3 (1-73)||(13574831-13574903)
chr3 (1-64)||(20303296-20303359)
chr3 (1-64)||(34992716-34992779)
chr3 (115-182)||(46139380-46139447)
chr3 (1-67)||(37246764-37246830)
chr3 (116-196)||(52724121-52724201)
chr3 (1-64)||(20327760-20327823)
chr3 (116-183)||(22775534-22775601)
chr3 (1-67)||(26753432-26753498)
chr3 (116-193)||(15019415-15019492)
chr3 (135-180)||(21888525-21888570)
chr3 (126-182)||(20303209-20303265)
chr3 (135-183)||(50052692-50052740)
[»] scaffold0366 (3 HSPs)
scaffold0366 (116-190)||(14514-14589)
scaffold0366 (116-190)||(10848-10923)
scaffold0366 (1-64)||(14514-14578)
[»] scaffold0692 (2 HSPs)
scaffold0692 (116-190)||(5654-5728)
scaffold0692 (1-57)||(5665-5721)
[»] chr7 (26 HSPs)
chr7 (116-190)||(48661455-48661529)
chr7 (1-64)||(4886439-4886502)
chr7 (116-183)||(25620253-25620320)
chr7 (116-183)||(30727254-30727321)
chr7 (116-183)||(33996214-33996281)
chr7 (119-179)||(3519863-3519923)
chr7 (116-175)||(1596718-1596777)
chr7 (119-166)||(1751736-1751783)
chr7 (6-73)||(2376362-2376429)
chr7 (116-183)||(3519939-3520006)
chr7 (1-64)||(21861404-21861467)
chr7 (116-183)||(21861411-21861478)
chr7 (1-64)||(25620246-25620309)
chr7 (112-183)||(31892269-31892340)
chr7 (140-183)||(32278995-32279038)
chr7 (1-64)||(33834301-33834364)
chr7 (116-183)||(33834308-33834375)
chr7 (1-64)||(33996225-33996288)
chr7 (1-36)||(35308292-35308327)
chr7 (116-183)||(36277126-36277193)
chr7 (112-163)||(49117154-49117205)
chr7 (125-179)||(20305415-20305469)
chr7 (116-182)||(32292637-32292703)
chr7 (1-53)||(3519871-3519923)
chr7 (1-53)||(20305415-20305467)
chr7 (1-57)||(48661466-48661522)
[»] scaffold0519 (2 HSPs)
scaffold0519 (116-183)||(2033-2100)
scaffold0519 (1-64)||(2026-2089)
[»] scaffold0459 (1 HSPs)
scaffold0459 (116-190)||(13207-13282)
[»] scaffold0729 (1 HSPs)
scaffold0729 (140-190)||(2604-2654)


Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 6415845 - 6415585
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaatgttaacagaaaggctcaaataccattttagaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6415845 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaatgttaacagaaaggctcaaataccattttagaaa 6415746  T
Q  101 tcatgttcatgccatcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaaca 200  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  6415745 tcatgttcatgccatcactattgagcttggtttatgaacataaatggtggatgatccgatagcgaagacttgatagcaggtggttcaatgaatgttaaca 6415646  T
Q  201 gaaagactctcataccattttaaaaatcattggttgagactaacacaaccccacatgttcat 262  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  6415645 gaaagactctgataccattttaaaaatca-tggttgaggctaacacaaccccacatgttcat 6415585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 6415856 - 6415742
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaacagaaagactctcatac 215  Q
    |||||||| ||||||||  |||| ||||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| |||  ||||    
T  6415856 cactattgggcttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaatgttaacagaaaggctcaaatac 6415757  T
Q  216 cattttaaaaatcat 230  Q
    ||||||| |||||||    
T  6415756 cattttagaaatcat 6415742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 24270005 - 24270072
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||||||  |||| ||||||||||| || ||||||| |||| ||||||||||||||||    
T  24270005 cactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtgg 24270072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 24346636 - 24346703
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||||||  |||| ||||||||||| || ||||||| |||| ||||||||||||||||    
T  24346636 cactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtgg 24346703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 95401 - 95468
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||| ||||| ||||||||||||||||    
T  95401 cactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtgg 95468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6413568 - 6413631
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || | |||||||||| || ||||||||||||| ||||||    
T  6413568 ttggttcgtggacataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatg 6413631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 41666892 - 41666959
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || ||||||| |||| ||||||||||||||||    
T  41666892 cactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtgg 41666959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 43117831 - 43117764
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||||||  |||| ||||||| ||| ||  ||||||||||| ||||||||||||||||    
T  43117831 cactattgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtgg 43117764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 15480497 - 15480439
Alignment:
Q  125 gcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||| ||||||||||| || ||| |||||||| ||||||||||||||||    
T  15480497 gcttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcaggtgg 15480439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 17150379 - 17150435
Alignment:
Q  127 ttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    ||||||| |||| ||||||||||| || |||||||||||| ||||||||| ||||||    
T  17150379 ttggtttctggacataaatggtgggtggcccgatagcggaaacctgatagtaggtgg 17150435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 95412 - 95475
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||| | ||| || ||||||||||||| ||||||    
T  95412 ttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatg 95475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 8081249 - 8081316
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| ||  ||||||| ||| ||||||||||||||||    
T  8081249 cactattgggcttggttcgtggacataaatggtgggtggtccgataggggatacctgatagcaggtgg 8081316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 18333599 - 18333666
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    ||||| || ||||||||  |||| ||||||||||| || |||||||||| | ||||||||||||||||    
T  18333599 cactaatgggcttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtgg 18333666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24270016 - 24270079
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||  ||| || ||||||||||||| ||||||    
T  24270016 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatg 24270079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24346647 - 24346710
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||  ||| || ||||||||||||| ||||||    
T  24346647 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatg 24346710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8081260 - 8081322
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaat 63  Q
    |||||||||||||||||| ||||| ||  ||||||| ||| || ||||||||||||| |||||    
T  8081260 ttggttcgtggacataaatggtgggtggtccgataggggatacctgatagcaggtggcccaat 8081322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15590111 - 15590049
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaat 63  Q
    |||||||||||||||||| ||||  |  |||||||| ||| |||||||||||||||| |||||    
T  15590111 ttggttcgtggacataaatggtgagtagcccgatagcggaaacttgatagcaggtggcccaat 15590049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 33337373 - 33337435
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagca 178  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||| ||||| |||||||||||    
T  33337373 cactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagca 33337435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41666903 - 41666964
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaa 62  Q
    |||||||||||||||||| ||||| || |||||||  ||| || ||||||||||||| ||||    
T  41666903 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaa 41666964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17352580 - 17352636
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||||||| | |||||| |||| ||| || |||||||| ||||    
T  17352580 ttggttcgtggacataaacggtaggtgacccaatagcggaaacctgatagcaagtgg 17352636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18333610 - 18333666
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| ||||| || |||||||| | | || |||||||||||||    
T  18333610 ttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtgg 18333666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 3680196 - 3680130
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  3680196 cactattgggcttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtg 3680130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 17147795 - 17147861
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||| ||||||||  |||| ||||||||||| ||||| ||||||||| |||||||||||||||    
T  17147795 cactattgggcttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatagcaggtg 17147861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 4868712 - 4868779
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || ||||||| |||| ||||||||||||||||    
T  4868712 cactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtgg 4868779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 13353385 - 13353318
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| |||||||| |||||||    
T  13353385 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtgg 13353318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33494712 - 33494657
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtg 56  Q
    |||||||||| ||||||||||||| || |||||||||||| || ||||||||||||    
T  33494712 ttggttcgtgaacataaacggtgggtggcccgatagtggaaacctgatagcaggtg 33494657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 33796510 - 33796443
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| |||||||| |||||||    
T  33796510 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtgg 33796443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 33631705 - 33631771
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||||||||||||  |||| ||||||||||| || ||||||||| || |||||||| ||||||    
T  33631705 cactattgagcttggttagtggacataaatggtgggtgtcccgatagcagaaacctgatatcaggtg 33631771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17147806 - 17147875
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaatgtt 70  Q
    |||||||||||||||||| ||||| ||||| ||||| ||| || ||||||||||||  |||||| |||||    
T  17147806 ttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatagcaggtgacccaatggatgtt 17147875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3680185 - 3680130
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtg 56  Q
    |||||| ||||||||||| ||||||||||||||||| ||| || | ||||||||||    
T  3680185 ttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtg 3680130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 12330083 - 12330146
Alignment:
Q  120 attgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||| ||||||||  |||| ||||||||||| || |||||| ||||| ||||||||||||||||    
T  12330083 attgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtgg 12330146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12330090 - 12330153
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||| | ||| || ||||||||||||| ||||||    
T  12330090 ttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatg 12330153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13353374 - 13353311
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||| ||||||| ||||||    
T  13353374 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatg 13353311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33796499 - 33796436
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||| ||||||| ||||||    
T  33796499 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatg 33796436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 6400755 - 6400821
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||| ||||||||  |||| ||||||||||| ||  |||||||| || |||||||||||||||    
T  6400755 cactattgggcttggttcgtggacataaatggtgggtggtccgatagcagaaacctgatagcaggtg 6400821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 28648870 - 28648919
Alignment:
Q  138 atataaatggtggatgacccgatagcggagacctgatagcaggtggttca 187  Q
    ||||||||||||| |  |||||||||||| |||| |||||||||||||||    
T  28648870 atataaatggtgggtagcccgatagcggaaacctaatagcaggtggttca 28648919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4868723 - 4868779
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| ||||| || |||||||  ||| || |||||||||||||    
T  4868723 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtgg 4868779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 6542853 - 6542905
Alignment:
Q  126 cttggtttatggatataaatggtggatgacccgatagcggagacctgatagca 178  Q
    |||||||  |||| ||||||||||| |||||||||| |||| |||||||||||    
T  6542853 cttggttcgtggacataaatggtgggtgacccgataacggaaacctgatagca 6542905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 12648569 - 12648501
Alignment:
Q  5 ttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaatgttaac 73  Q
    |||||| ||||||| ||| | |||| |||||||||| |||||||||||| | |||||||| || |||||    
T  12648569 ttcgtgaacataaatggtaggtgactcgatagtggaaacttgatagcagatagtccaatggatcttaac 12648501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 35819028 - 35819163
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaacagaaagactctcatac 215  Q
    |||||||| ||||||||  |||| ||||||||||| ||||||||||||||| ||||||||||||||||  ||||| || ||   ||| ||||||| || |    
T  35819028 cactattgggcttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatctt---agagagactctgatgc 35819124  T
Q  216 cattttaaaaatcattggttgagactaacacaaccccaca 255  Q
    ||| |||||||||  |||||| | ||||||||||| ||||    
T  35819125 catcttaaaaatc-gtggttgggcctaacacaacctcaca 35819163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 28245661 - 28245728
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||||||    
T  28245661 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtgg 28245728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35819039 - 35819102
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| ||||||||||| ||| || ||||||||||||| ||||||    
T  35819039 ttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatg 35819102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 35796877 - 35796951
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| |||||||||||||| || |||||    
T  35796877 cactattgggcttggttcgtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatg 35796951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 50543465 - 50543533
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggt 184  Q
    |||||||| ||||||||  |||| ||||||||||| || ||||||| |||| |||||||||||||||||    
T  50543465 cactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggt 50543533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 22231208 - 22231275
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||| | || |||||||||||| ||||||||||||||||    
T  22231208 cactattgggcttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtgg 22231275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28245672 - 28245735
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||||||||||| ||||||    
T  28245672 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 28245735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5398621 - 5398685
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatga 65  Q
    |||||||||||||||||| ||||| ||  ||||||| ||| || ||||||||||||| |||||||    
T  5398621 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatga 5398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 5398610 - 5398677
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||  ||||||||  |||| ||||||||||| ||  ||||||||||| ||||||||||||||||    
T  5398610 cactatttggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtgg 5398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 6666535 - 6666602
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| |||||||  ||||||||||||||||| |||||||||||  ||  ||| |||||||||||    
T  6666535 cactattgggcttggtgcatggatataaatggtgggtgacccgatagaagaatccttatagcaggtgg 6666602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 7572616 - 7572675
Alignment:
Q  125 gcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggt 184  Q
    |||||||  ||||||||||||||||| || ||| |||||||| ||||||||| |||||||    
T  7572616 gcttggtgcatggatataaatggtgggtggcccaatagcggaaacctgatagaaggtggt 7572675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22231219 - 22231282
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||| | || |||||||| ||| || ||||||||||||| ||||||    
T  22231219 ttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatg 22231282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 35788844 - 35788777
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || || |||| |||| ||||||||||||||||    
T  35788844 cactattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtgg 35788777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35796888 - 35796951
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||| ||||| ||||| || |||||||| ||| || ||||||||||| ||||||||    
T  35796888 ttggttcgtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatg 35796951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 36686065 - 36686108
Alignment:
Q  140 ataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    ||||||||||| || |||||||||||| ||||||||||||||||    
T  36686065 ataaatggtgggtggcccgatagcggaaacctgatagcaggtgg 36686108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 40717341 - 40717408
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||  ||||||||| |||| ||||||||||| ||  ||||||||||| ||||||| ||||||||    
T  40717341 cactattaggcttggtttgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtgg 40717408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 6778602 - 6778652
Alignment:
Q  140 ataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| || || |||||||||||| ||||||||||| |||||||||||    
T  6778602 ataaatggggggtggcccgatagcggaaacctgatagcatgtggttcaatg 6778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 21750188 - 21750218
Alignment:
Q  1 ttggttcgtggacataaacggtggatgaccc 31  Q
    |||||||||||||||||||||||||||||||    
T  21750188 ttggttcgtggacataaacggtggatgaccc 21750218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 25324190 - 25324236
Alignment:
Q  137 gatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||| || |||||||||||| || |||||||||||||    
T  25324190 gatataaatggtgggtggcccgatagcggaaacttgatagcaggtgg 25324236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50543476 - 50543534
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtc 59  Q
    |||||||||||||||||| ||||| || |||||||  ||| || |||||||||||||||    
T  50543476 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtc 50543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 11036649 - 11036713
Alignment:
Q  119 tattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||| ||||| || |||||||| || || ||||||||| |||| |||| ||||||    
T  11036649 tattgagcttggttcatggacattaatggtgggtggcctgatagcggaaacctaatagtaggtgg 11036713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35645311 - 35645367
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| || || || |||||||| ||| ||||||||||| ||||    
T  35645311 ttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtgg 35645367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35645600 - 35645656
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| || || || |||||||| ||| ||||||||||| ||||    
T  35645600 ttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtgg 35645656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 17525230 - 17525301
Alignment:
Q  112 ccatcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||||||    
T  17525230 ccatcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggatacctgatagcaggtgg 17525301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 15124683 - 15124818
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaacagaaagactctcatac 215  Q
    ||||||||  |||||||  |||| |||||||||||||||||||||| || | ||||||||||||||||| ||||| || ||    || ||||||| ||||    
T  15124683 cactattggacttggttcgtggacataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatggatctt---ggagagactctgatac 15124779  T
Q  216 cattttaaaaatcattggttgagactaacacaaccccaca 255  Q
    ||| ||| |||||  |||||| | ||||||||||||||||    
T  15124780 catcttagaaatc-gtggttgggtctaacacaaccccaca 15124818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15124694 - 15124757
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||||||||||||||  | | || ||||||||||||||||||||    
T  15124694 ttggttcgtggacataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatg 15124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 16419451 - 16419384
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||||||  |||| ||||||||||| || | |||||||||| ||||||||||||||||    
T  16419451 cactattgagcttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtgg 16419384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 44404061 - 44404136
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgata-gcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| |||||||| ||||| |||||| |||| |||||||||| ||||| ||||||||||||||||| |||||    
T  44404061 cactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatg 44404136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 5711574 - 5711642
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggt 184  Q
    |||||||| ||||||||  |||| ||||||||||| || ||||||| |||| |||||||||||||||||    
T  5711574 cactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggt 5711642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 31001879 - 31001951
Alignment:
Q  112 ccatcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggt 184  Q
    |||||||||||| ||||||||  |||||||||||||| | || |  ||||||||| |||||||||||||||||    
T  31001879 ccatcactattgggcttggttcgtggatataaatggtaggtggcatgatagcggaaacctgatagcaggtggt 31001951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17525245 - 17525308
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||||||||||| ||||||    
T  17525245 ttggttcgtggacataaatggtgggtggcccgatagcggatacctgatagcaggtggcccaatg 17525308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 40379344 - 40379411
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||| ||| ||||||||  |||||||||||||||| || |||||||| ||| ||||||||||||||||    
T  40379344 cacttttgggcttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtgg 40379411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5711585 - 5711646
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaa 62  Q
    |||||||||||||||||| ||||| || |||||||  ||| || ||||||||||||||||||    
T  5711585 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtccaa 5711646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17719573 - 17719517
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| |||||||| || ||||| ||| || |||||||||||||    
T  17719573 ttggttcgtggacataaatggtggatggccggataggggaaacctgatagcaggtgg 17719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 2029953 - 2029886
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| ||  ||||||||||| |||| |||||||||||    
T  2029953 cactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctaatagcaggtgg 2029886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 14466310 - 14466369
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgata 175  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||    
T  14466310 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgata 14466369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16419440 - 16419377
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || | |||||| ||| || ||||||||||||| ||||||    
T  16419440 ttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatg 16419377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37812414 - 37812477
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    ||||||||||||||||||| |||| || ||||||||  || || ||||||||||||| ||||||    
T  37812414 ttggttcgtggacataaacagtgggtggcccgatagcagaaacctgatagcaggtggcccaatg 37812477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 33606185 - 33606251
Alignment:
Q  112 ccatcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagca 178  Q
    |||||||||||  ||||||||  |||| ||||||||||| || || ||||||||| |||||||||||    
T  33606185 ccatcactattaggcttggttcgtggacataaatggtgggtggcctgatagcggaaacctgatagca 33606251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 16533496 - 16533431
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggt 181  Q
    ||||||||  |||||||  |||| ||||||||||| || |||||||||| | ||||||||||||||    
T  16533496 cactattggccttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggt 16533431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 17719574 - 17719517
Alignment:
Q  126 cttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||  |||| |||||||||||||| || ||||| ||| ||||||||||||||||    
T  17719574 cttggttcgtggacataaatggtggatggccggataggggaaacctgatagcaggtgg 17719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 878080 - 878032
Alignment:
Q  111 gccatcactattgagcttggtttatggatataaatggtggatgacccga 159  Q
    |||| ||||||||||||||||   |||||||||||||||| ||||||||    
T  878080 gccagcactattgagcttggtgcgtggatataaatggtgggtgacccga 878032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40379355 - 40379411
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||| ||||| ||||| || |||||||| ||| || |||||||||||||    
T  40379355 ttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtgg 40379411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44404072 - 44404136
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgata-gtggagacttgatagcaggtggtccaatg 64  Q
    ||||||| ||||||||||  |||| |||||||||| | ||| || ||||||||||||||||||||    
T  44404072 ttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatg 44404136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 3157144 - 3157218
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||||||| |||||    
T  3157144 cactattgggcttggttcgtggacataaatggtgggtgtcccgatagcggaaacctgatagcaggtggtccaatg 3157218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3157155 - 3157218
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||||||||||||||||||    
T  3157155 ttggttcgtggacataaatggtgggtgtcccgatagcggaaacctgatagcaggtggtccaatg 3157218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 31197798 - 31197731
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||||||  |||| ||||||||||| ||  ||||||||||| ||||||||||||||||    
T  31197798 cactattgagcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtgg 31197731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 35682916 - 35682983
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||||||  |||| ||||||||||| || |||||||||||| |||| |||||||||||    
T  35682916 cactattgagcttggttcgtggacataaatggtgggtggcccgatagcggaaacctaatagcaggtgg 35682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 3157459 - 3157533
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||| | ||||||||||||||||| |||||    
T  3157459 cactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatg 3157533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15042795 - 15042861
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaat 67  Q
    |||||||||||||||||||||||| || || ||||| ||| || ||||||||||||| |||||||||    
T  15042795 ttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaat 15042861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5675880 - 5675936
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| ||||| ||||||||||| | | ||||||||||||||||    
T  5675880 ttggttcgtggacataaatggtgggtgacccgatagcgaaaacttgatagcaggtgg 5675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3157470 - 3157533
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| | | || ||||||||||||||||||||    
T  3157470 ttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatg 3157533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 11232329 - 11232396
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| |||| |||||||||| |||||||| |||||||    
T  11232329 cactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtgg 11232396  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 18004229 - 18004296
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||  ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||||||    
T  18004229 cactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtgg 18004296  T

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Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18004240 - 18004303
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||||||||||| ||||||    
T  18004240 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 18004303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 39052672 - 39052739
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || || ||||||||| ||||||||||||||||    
T  39052672 cactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcaggtgg 39052739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 41790842 - 41790775
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||| ||| |||||||| ||||| ||||||||||| || | |||||||||| ||||||||||||||||    
T  41790842 cactcttgggcttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtgg 41790775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 8716280 - 8716163
Alignment:
Q  135 tggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaacagaaagactctcataccattttaaaaatcattggt 234  Q
    |||| ||||||||| | ||||||||||||||| |||| |||||| |||  |||||| || |||||   ||| |||| ||||||| ||| ||||| |||||    
T  8716280 tggacataaatggtcggtgacccgatagcggaaacctaatagcatgtgactcaatggatcttaac--gaaggctctgataccatattagaaatc-ttggt 8716184  T
Q  235 tgagactaacacaaccccaca 255  Q
    || | ||||||||||||||||    
T  8716183 tgggtctaacacaaccccaca 8716163  T

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Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 7669597 - 7669529
Alignment:
Q  122 tgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||||||  |||| ||||||||||| ||  ||||||| ||| |||||||||||||||| ||||||    
T  7669597 tgagcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggctcaatg 7669529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7669592 - 7669536
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| ||||| ||  ||||||||||| || |||||||||||||    
T  7669592 ttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtgg 7669536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 39052829 - 39052893
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcagg 180  Q
    |||||||| ||||||||  |||| ||||||||||| || || ||||||||| |||||||||||||    
T  39052829 cactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcagg 39052893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 5675869 - 5675936
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    ||||||||  |||||||  |||| ||||||||||| ||||||||||||| | || |||||||||||||    
T  5675869 cactattggacttggttcgtggacataaatggtgggtgacccgatagcgaaaacttgatagcaggtgg 5675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 8466619 - 8466690
Alignment:
Q  112 ccatcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||| |||||||   || ||||||||||||| || |  ||||||||| ||||||||||||||||    
T  8466619 ccatcactattgggcttggtgcgtgcatataaatggtgggtggcttgatagcggaaacctgatagcaggtgg 8466690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11232340 - 11232403
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| |||| |||||| ||| || ||||| ||||||| ||||||    
T  11232340 ttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatg 11232403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 20301445 - 20301378
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  | || ||||||||||| ||  ||||||||||| ||||||||||||||||    
T  20301445 cactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtgg 20301378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 21088077 - 21088010
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  | || ||||||||||| ||  ||||||||||| ||||||||||||||||    
T  21088077 cactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtgg 21088010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31197787 - 31197724
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| ||  ||||||| ||| || ||||||||||||| ||||||    
T  31197787 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatg 31197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35682927 - 35682990
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || | ||||||||||| ||||||    
T  35682927 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctaatagcaggtggcccaatg 35682990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 39960141 - 39960074
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| |  | |||||||||| ||||||||||||||||    
T  39960141 cactattgggcttggttcgtggacataaatggtgggtagctcgatagcggaaacctgatagcaggtgg 39960074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 5932084 - 5932158
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||| | || ||||||||||| || ||||||| |||| || |||||| ||||||| |||||    
T  5932084 cactattgcgcttggtttgtcgacataaatggtgggtggcccgataacggaaacgtgatagtaggtggtccaatg 5932158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 10615578 - 10615504
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    ||||||||  |||||||  |||| |||||| || | ||||||||||||||| |||||||| |||||||| |||||    
T  10615578 cactattggacttggttcgtggagataaatagttggtgacccgatagcggaaacctgatatcaggtggtacaatg 10615504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 422356 - 422420
Alignment:
Q  119 tattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||| |||||||  |||| | ||||||||| || ||||| |||||| ||||||||||||||||    
T  422356 tattgaacttggttcgtggacaaaaatggtgggtggcccgagagcggaaacctgatagcaggtgg 422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 15042793 - 15042861
Alignment:
Q  125 gcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaat 193  Q
    ||||||||  |||| ||||| ||||| || || ||||||||| ||||||||||||||||  ||||||||    
T  15042793 gcttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaat 15042861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39052683 - 39052739
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| ||||| || || ||||| ||| || |||||||||||||    
T  39052683 ttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcaggtgg 39052739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 34264621 - 34264695
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||  | |||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||    
T  34264621 cactattgtgcttggttcgtcgatataaatggtggttgacccgatagcggaaacctgatagcatgtggtttaatg 34264695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25713331 - 25713268
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| |||||||||||||||| ||||||    
T  25713331 ttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatg 25713268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 33156918 - 33156852
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||| ||||| ||  |||| |||||||||||||| |||||||||||| |||||||||||||||    
T  33156918 cactattgggcttgattcgtggacataaatggtggatggcccgatagcggaaacctgatagcaggtg 33156852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 17208738 - 17208666
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaa 188  Q
    |||||||| |||||||   |||||||||||||||| || |||||||||||| |||||||||||| ||| ||||    
T  17208738 cactattgggcttggtgggtggatataaatggtgggtggcccgatagcggaaacctgatagcagatggctcaa 17208666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 25713342 - 25713275
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| || |||||||||||||    
T  25713342 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtgg 25713275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 35772213 - 35772150
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcag 179  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||    
T  35772213 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 35772150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39348263 - 39348326
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| ||  ||||||||||| || ||||||||||||| ||||||    
T  39348263 ttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatg 39348326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 30370007 - 30369953
Alignment:
Q  2 tggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtg 56  Q
    ||||||||||||||||| ||||| || |||||||||||| || ||||||||||||    
T  30370007 tggttcgtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtg 30369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 369816 - 369752
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatga-cccgatagcggagacctgatagcag 179  Q
    |||||||| ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||    
T  369816 cactattgggcttggttcgtggacataaatggtgggtgaccccgatagcggaaacctgatagcag 369752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 26177092 - 26177025
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    ||||||||  |||||||  |||||||||||||||| ||  ||||||||||| | ||||||||||||||    
T  26177092 cactattggacttggttcgtggatataaatggtgggtggtccgatagcggaaatctgatagcaggtgg 26177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 33156903 - 33156852
Alignment:
Q  5 ttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtg 56  Q
    |||||||||||||| |||||||| |||||||| ||| || ||||||||||||    
T  33156903 ttcgtggacataaatggtggatggcccgatagcggaaacctgatagcaggtg 33156852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35772202 - 35772139
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||||||| ||| ||||||    
T  35772202 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatg 35772139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 39348252 - 39348319
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| ||  ||||||| ||| ||||||||||||||||    
T  39348252 cactattgggcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtgg 39348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 52961531 - 52961464
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||| ||  || | |||| |||||| || |||||||||||| ||||||||||||||||    
T  52961531 cactattgagcttgtttcgtgtacataactggtgggtggcccgatagcggaaacctgatagcaggtgg 52961464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 4112675 - 4112749
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||  | || ||||||||||| ||   |||||||||| ||||||||||||||||| |||||    
T  4112675 cactattgggcttggttcgttgacataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatg 4112749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 4112906 - 4112980
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||||||||||||  |||| ||||||||||| ||  || |||||||| |||||||||  ||||| ||||||    
T  4112906 cactattgagcttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagatggtggctcaatg 4112980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7653414 - 7653365
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatag 50  Q
    |||||||||| ||||||| |||||||| |||||||||||| ||| |||||    
T  7653414 ttggttcgtgtacataaatggtggatgccccgatagtggaaactggatag 7653365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 25145620 - 25145693
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaat 189  Q
    |||||||||||||| ||  |||| || |||||||| ||  |||||| |||| |||||||||||||||| |||||    
T  25145620 cactattgagcttgattcgtggacattaatggtgggtggtccgataacggaaacctgatagcaggtgggtcaat 25145693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 369805 - 369741
Alignment:
Q  1 ttggttcgtggacataaacggtggatga-cccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| ||| |||||||| ||| || ||||||||| || |||||||    
T  369805 ttggttcgtggacataaatggtgggtgaccccgatagcggaaacctgatagcagctgatccaatg 369741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 5109413 - 5109357
Alignment:
Q  137 gatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaat 193  Q
    |||||||||||||| ||||||||||  ||| ||||||||| |||||| |||| ||||    
T  5109413 gatataaatggtgggtgacccgataatggaaacctgatagaaggtggctcaacgaat 5109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 16163098 - 16163050
Alignment:
Q  135 tggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||| ||||||||| | || |||||||||||| ||||||||||||||||    
T  16163098 tggacataaatggtaggtggcccgatagcggaaacctgatagcaggtgg 16163050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 26173360 - 26173424
Alignment:
Q  120 attgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggt 184  Q
    ||||||||| |||  |||| |||||||||||  |  ||||||||||| |||||||||||||||||    
T  26173360 attgagcttagttcgtggacataaatggtggggggtccgatagcggaaacctgatagcaggtggt 26173424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 27413531 - 27413463
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggt 184  Q
    |||||||| ||||| ||  |||| ||||||||||| || |||||||||||| | |||||| ||||||||    
T  27413531 cactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaaatctgataacaggtggt 27413463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 87709 - 87786
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaat 193  Q
    ||||||||||| || | | |||||||||||||||| ||||||||||| ||| ||||||||||||||||  ||||||||    
T  87709 cactattgagcatgatgtgtggatataaatggtgggtgacccgatagtggaaacctgatagcaggtggcccaatgaat 87786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 87727 - 87786
Alignment:
Q  8 gtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaat 67  Q
    ||||| ||||| ||||| ||||||||||||||| || ||||||||||||| |||||||||    
T  87727 gtggatataaatggtgggtgacccgatagtggaaacctgatagcaggtggcccaatgaat 87786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 102296 - 102343
Alignment:
Q  135 tggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  102296 tggatataaatggtgggtgacccgatagtggaaacctgatagcaggtg 102343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 102295 - 102343
Alignment:
Q  8 gtggacataaacggtggatgacccgatagtggagacttgatagcaggtg 56  Q
    ||||| ||||| ||||| ||||||||||||||| || ||||||||||||    
T  102295 gtggatataaatggtgggtgacccgatagtggaaacctgatagcaggtg 102343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 20327749 - 20327884
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaacagaaagactctcatac 215  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||||||  ||||| || ||   ||| || | || ||||    
T  20327749 cactattgggcttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatttt---agagaggcactgatac 20327845  T
Q  216 cattttaaaaatcattggttgagactaacacaaccccaca 255  Q
    ||| ||| |||||| |||||| | ||||||||||||||||    
T  20327846 catattagaaatca-tggttgggcctaacacaaccccaca 20327884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 37246777 - 37246888
Alignment:
Q  140 ataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaacagaaagactctcataccattttaaaaatcattggttgaga 239  Q
    |||||||||||||||||||||| || | |||| |||||||||||| |||||||| || |   | ||||| | ||||||| |||||||||||| ||||||     
T  37246777 ataaatggtggatgacccgataacgaaaacctaatagcaggtggtccaatgaatcttga---atagactttgataccatcttaaaaatcatt-gttgagt 37246872  T
Q  240 ctaacacaaccccaca 255  Q
    |||||||||| |||||    
T  37246873 ctaacacaactccaca 37246888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 13574820 - 13574887
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| |||| |||||||||| ||||||||||||||||    
T  13574820 cactattgggcttggttcgtggacataaatggtgggtgacacgatagcggaaacctgatagcaggtgg 13574887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 16239780 - 16239709
Alignment:
Q  112 ccatcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||||||||||  |||| ||||||||||| || | ||||| |||| ||||||||||||||||    
T  16239780 ccatcactattgagcttggttcgtggacataaatggtgggtggctcgataacggaaacctgatagcaggtgg 16239709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 34992790 - 34992723
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  34992790 cactattgggcttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatagcaggtgg 34992723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 49629790 - 49629715
Alignment:
Q  116 cactattgagcttggtttatggatataaatggt-ggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| |||||||||||||| ||||||||| |||||  |||||||| || ||||||||||||||||| |||||    
T  49629790 cactattgggcttggtttatggacataaatggtgggatgctccgatagcagaaacctgatagcaggtggtccaatg 49629715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4155497 - 4155431
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaat 67  Q
    ||||||||| |||||||||||||| || |||||||| ||| || ||||||||||||| |||||||||    
T  4155497 ttggttcgtcgacataaacggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgaat 4155431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 4155508 - 4155373
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgttaacagaaagactctcatac 215  Q
    |||||||| ||||||||  | || ||||| ||||| || |||||||||||| ||||||||||||||||  |||||||| ||    || ||||||| ||||    
T  4155508 cactattgggcttggttcgtcgacataaacggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgaatctt---ggagagactctgatac 4155412  T
Q  216 cattttaaaaatcattggttgagactaacacaaccccaca 255  Q
    ||| ||| |||||  |||||| | ||||||||||||||||    
T  4155411 catcttagaaatc-gtggttgggcctaacacaaccccaca 4155373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13574831 - 13574903
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaatgttaac 73  Q
    |||||||||||||||||| ||||| |||| |||||| ||| || ||||||||||||| |||||| || |||||    
T  13574831 ttggttcgtggacataaatggtgggtgacacgatagcggaaacctgatagcaggtggcccaatggatcttaac 13574903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20303296 - 20303359
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| ||  ||||||||||| || ||||||||||||| ||||||    
T  20303296 ttggttcgtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatg 20303359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34992779 - 34992716
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| |||||||| || ||| || ||||||||||||| ||||||    
T  34992779 ttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatagcaggtggcccaatg 34992716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 46139447 - 46139380
Alignment:
Q  115 tcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    ||||||||| ||||||||| || | ||||||||||| || ||||||||| || |||||||||||||||    
T  46139447 tcactattgggcttggtttgtgaacataaatggtgggtggcccgatagcagaaacctgatagcaggtg 46139380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37246764 - 37246830
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaat 67  Q
    ||||||||| |||||||| ||||||||||||||||  | | || | |||||||||||||||||||||    
T  37246764 ttggttcgttgacataaatggtggatgacccgataacgaaaacctaatagcaggtggtccaatgaat 37246830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 52724121 - 52724201
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaatgtt 196  Q
    |||||| ||| |||||| ||||| ||||||||||| || |||||||||| | ||||||||||| |||   |||||||||||    
T  52724121 cactatcgagtttggttcatggacataaatggtgggtggcccgatagcgaaaacctgatagcatgtgacccaatgaatgtt 52724201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20327760 - 20327823
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    ||||||| |||||||||| ||||| || |||||||| ||| || ||||||||||||| ||||||    
T  20327760 ttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 20327823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 22775534 - 22775601
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| | |||||  ||||||||||||||||| || ||||||||| || |||| |||||||||||    
T  22775534 cactattgggattggtgcatggatataaatggtgggtggcccgatagcagaaacctaatagcaggtgg 22775601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26753432 - 26753498
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaat 67  Q
    |||||||||| |||||||||| || || |||||||||| |  | |||||||||||| ||||||||||    
T  26753432 ttggttcgtgaacataaacggcgggtgccccgatagtgaaatcctgatagcaggtgatccaatgaat 26753498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 15019415 - 15019492
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatgaat 193  Q
    |||||||||||||||||  ||||| |||||||||| | | ||||||||| | | ||||||| ||||||  ||||||||    
T  15019415 cactattgagcttggttcgtggatttaaatggtgggttatccgatagcgaaaatctgatagtaggtggcccaatgaat 15019492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 21888570 - 21888525
Alignment:
Q  135 tggatataaatggtggatgacccgatagcggagacctgatagcagg 180  Q
    |||||||||||||||| ||  ||||||||||| |||||||||||||    
T  21888570 tggatataaatggtgggtggtccgatagcggaaacctgatagcagg 21888525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 20303209 - 20303265
Alignment:
Q  126 cttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||  |||| ||||||||||| ||  ||||||||||| |||||||||||||||    
T  20303209 cttggttcgtggacataaatggtgggtggaccgatagcggaaacctgatagcaggtg 20303265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 50052692 - 50052740
Alignment:
Q  135 tggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| |||| ||||||||||| ||| || ||||||||||||||||    
T  50052692 tggatatagatggcggatgacccgacagcagaaacctgatagcaggtgg 50052740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 14589 - 14514
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgata-gcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| |||||||| ||||| |||||| |||| |||||||||| ||||| ||||||||||||||||| |||||    
T  14589 cactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatg 14514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 10923 - 10848
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatag-cggagacctgatagcaggtggttcaatg 190  Q
    |||||||| |||||||| ||||| |||||| |||| |||||| |||| |||| ||||||||||||||||| |||||    
T  10923 cactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatg 10848  T

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Target: scaffold0366; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14578 - 14514
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagt-ggagacttgatagcaggtggtccaatg 64  Q
    ||||||| ||||||||||  |||| |||||||||||  ||| || ||||||||||||||||||||    
T  14578 ttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatg 14514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 5654 - 5728
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||  |||| ||||||||||| ||  ||||||||||| |||||||||||||||| ||||||    
T  5654 cactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatg 5728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5665 - 5721
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| ||||| ||  ||||||| ||| || |||||||||||||    
T  5665 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtgg 5721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 48661455 - 48661529
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| ||||||||  |||| ||||||||||| || ||||| |||||| |||||||||||||||| ||||||    
T  48661455 cactattgggcttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaatg 48661529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4886502 - 4886439
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || | ||||||| || |||||||||||||||| ||||||    
T  4886502 ttggttcgtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatg 4886439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 25620320 - 25620253
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || ||| |||||||| ||||||||||||||||    
T  25620320 cactattgggcttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtgg 25620253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 30727254 - 30727321
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| |||| |||| |||||||||||||||| || ||| |||||||| ||||||||| ||||||    
T  30727254 cactattgggcttagtttgtggatataaatggtgggtggcccaatagcggaaacctgatagaaggtgg 30727321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 33996214 - 33996281
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||| ||||| ||||||||||||||||    
T  33996214 cactattgggcttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtgg 33996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 3519863 - 3519923
Alignment:
Q  119 tattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcag 179  Q
    ||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||    
T  3519863 tattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 3519923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 1596777 - 1596718
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgata 175  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||||| ||||||||    
T  1596777 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgata 1596718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 1751783 - 1751736
Alignment:
Q  119 tattgagcttggtttatggatataaatggtggatgacccgatagcgga 166  Q
    ||||||| ||||| |||||| ||||||||||| |||||||||||||||    
T  1751783 tattgagtttggtgtatggaaataaatggtgggtgacccgatagcgga 1751736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 2376362 - 2376429
Alignment:
Q  6 tcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatgaatgttaac 73  Q
    ||||| ||||| | ||||||||||||||||||||| ||||||||||| | |||| |||| || |||||    
T  2376362 tcgtgaacatagatggtggatgacccgatagtggaaacttgatagcatgcggtcgaatggatattaac 2376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 3519939 - 3520006
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||||| | ||| ||||||||||||    
T  3519939 cactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtgg 3520006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21861467 - 21861404
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| ||| || ||||| ||||||| ||||||    
T  21861467 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatg 21861404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 21861478 - 21861411
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||  ||||||||  |||| ||||||||||| || |||||||||||| |||||||| |||||||    
T  21861478 cactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtgg 21861411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25620309 - 25620246
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || ||| |||| ||| || ||||||||||||| ||||||    
T  25620309 ttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatg 25620246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 31892340 - 31892269
Alignment:
Q  112 ccatcactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||| ||||| ||||||||  |||| ||||||||||| || || |||| |||| ||||||||||||||||    
T  31892340 ccatcattattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtgg 31892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 32278995 - 32279038
Alignment:
Q  140 ataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||||||||| |||||||||| | ||||||||||||||||    
T  32278995 ataaatggtggatggcccgatagcgaaaacctgatagcaggtgg 32279038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33834364 - 33834301
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||||| | | || ||||||||||||| ||||||    
T  33834364 ttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatg 33834301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 33834375 - 33834308
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| || |||||||| | | ||||||||||||||||    
T  33834375 cactattgggcttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtgg 33834308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33996225 - 33996288
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| || |||||| | ||| || ||||||||||||| ||||||    
T  33996225 ttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatg 33996288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 35308292 - 35308327
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatag 36  Q
    |||||||||||||||||||||||||||||| |||||    
T  35308292 ttggttcgtggacataaacggtggatgacctgatag 35308327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 36277126 - 36277193
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| ||  ||||||||||| ||||||||| ||||||    
T  36277126 cactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtgg 36277193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 49117205 - 49117154
Alignment:
Q  112 ccatcactattgagcttggtttatggatataaatggtggatgacccgatagc 163  Q
    |||||||||||| ||||||| | |||||| |||||||||||| |||||||||    
T  49117205 ccatcactattgggcttggtctgtggataaaaatggtggatggcccgatagc 49117154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 20305469 - 20305415
Alignment:
Q  125 gcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcag 179  Q
    ||||||||  |||| ||||||||||| || |||||||||||| ||||||||||||    
T  20305469 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 20305415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 32292703 - 32292637
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtg 182  Q
    |||||||| |||||||   |||||||| ||||||| ||||||||||||| | ||||||||| |||||    
T  32292703 cactattgggcttggtgcgtggatatatatggtgggtgacccgatagcgaaaacctgatagaaggtg 32292637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3519871 - 3519923
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcag 53  Q
    |||||||||||||||||| ||||| || |||||||| ||| || |||||||||    
T  3519871 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 3519923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20305467 - 20305415
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcag 53  Q
    |||||||||||||||||| ||||| || |||||||| ||| || |||||||||    
T  20305467 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 20305415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48661466 - 48661522
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtgg 57  Q
    |||||||||||||||||| ||||| || ||||| || ||| || |||||||||||||    
T  48661466 ttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtgg 48661522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 2100 - 2033
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatagcggagacctgatagcaggtgg 183  Q
    |||||||| ||||||||  |||| ||||||||||| |||| |||||||||| |||||||| |||||||    
T  2100 cactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtgg 2033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2089 - 2026
Alignment:
Q  1 ttggttcgtggacataaacggtggatgacccgatagtggagacttgatagcaggtggtccaatg 64  Q
    |||||||||||||||||| ||||| |||| |||||| ||| || ||||| ||||||| ||||||    
T  2089 ttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatg 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 13282 - 13207
Alignment:
Q  116 cactattgagcttggtttatggatataaatggtggatgacccgatag-cggagacctgatagcaggtggttcaatg 190  Q
    |||||||| |||||||| ||||| |||||| |||| |||||| |||| |||| ||||||||||||||||| |||||    
T  13282 cactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatg 13207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 2654 - 2604
Alignment:
Q  140 ataaatggtggatgacccgatagcggagacctgatagcaggtggttcaatg 190  Q
    |||||||| || || |||||||||||| ||||||||||| |||||||||||    
T  2654 ataaatggggggtggcccgatagcggaaacctgatagcatgtggttcaatg 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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