View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2180_high_24 (Length: 346)
Name: NF2180_high_24
Description: NF2180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2180_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 11 - 329
Target Start/End: Complemental strand, 31261066 - 31260748
Alignment:
| Q |
11 |
cacagaacaattttcttactattaacggaaaaatctttaaaaaatgattatgttattcataaataaattaccagttgtttaaagttgttgtttaaagttt |
110 |
Q |
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| T |
31261066 |
cacagaacaattttcttactattaacggaaaaatctttaaaaaatgattatgttattcataaataaattaccagttgtttaaagttgttgtttaaagttt |
31260967 |
T |
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| Q |
111 |
ttcttagaggaatgatttaaagttatttgtcaatgagattgatagagagtaacgctttaggcttaagttttatttattttctgataaataaaacaattat |
210 |
Q |
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| T |
31260966 |
ttcttagaggaatgatttaaagttatttgtcaatgagattgatagagagtaacgctttaggcttaagttttatttattttctgataaataaaacaattat |
31260867 |
T |
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| Q |
211 |
gaataactgacaaacgttttatttattttctgatgaattgaaaaacaatttcattttgctattttgtggattaaaaagttgtataaattttagacttata |
310 |
Q |
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| T |
31260866 |
gaataactgacaaacgttttatttattttctgatgaattgaaaaacaatttcattttgctattttgtggattaaaaagttgtataaattttagacttata |
31260767 |
T |
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| Q |
311 |
atttttgagtcgctcttgt |
329 |
Q |
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||||||||||||||||||| |
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| T |
31260766 |
atttttgagtcgctcttgt |
31260748 |
T |
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