View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2180_high_33 (Length: 296)

Name: NF2180_high_33
Description: NF2180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2180_high_33
NF2180_high_33
[»] chr4 (13 HSPs)
chr4 (19-286)||(3767583-3767851)
chr4 (130-276)||(45499233-45499379)
chr4 (162-286)||(34513800-34513924)
chr4 (137-286)||(28115972-28116121)
chr4 (139-285)||(34940259-34940405)
chr4 (198-286)||(37910709-37910797)
chr4 (138-225)||(21342155-21342242)
chr4 (178-286)||(17702135-17702243)
chr4 (137-209)||(37911176-37911248)
chr4 (150-226)||(53923655-53923731)
chr4 (190-233)||(11138663-11138706)
chr4 (179-235)||(3692642-3692698)
chr4 (197-233)||(53923745-53923781)
[»] chr5 (11 HSPs)
chr5 (137-285)||(29860834-29860982)
chr5 (131-271)||(42683974-42684114)
chr5 (138-271)||(7883836-7883969)
chr5 (138-286)||(33008042-33008189)
chr5 (131-276)||(5868327-5868472)
chr5 (138-271)||(15922246-15922379)
chr5 (174-285)||(33134090-33134201)
chr5 (176-286)||(25347109-25347219)
chr5 (150-276)||(2498915-2499041)
chr5 (132-286)||(31077809-31077963)
chr5 (175-230)||(21092482-21092537)
[»] chr1 (9 HSPs)
chr1 (130-275)||(49549473-49549618)
chr1 (137-286)||(28622959-28623108)
chr1 (131-285)||(37347059-37347213)
chr1 (137-264)||(19909968-19910093)
chr1 (164-233)||(48527377-48527446)
chr1 (178-239)||(52267631-52267692)
chr1 (138-239)||(10306886-10306987)
chr1 (151-276)||(35508891-35509016)
chr1 (202-258)||(12856940-12856996)
[»] chr6 (7 HSPs)
chr6 (134-285)||(23404450-23404601)
chr6 (130-271)||(12255070-12255211)
chr6 (131-276)||(29979453-29979597)
chr6 (137-276)||(32329317-32329455)
chr6 (169-271)||(9314806-9314907)
chr6 (138-229)||(10789527-10789618)
chr6 (139-236)||(12267316-12267413)
[»] chr2 (7 HSPs)
chr2 (131-285)||(40619743-40619897)
chr2 (150-271)||(27338700-27338821)
chr2 (130-286)||(13996199-13996355)
chr2 (131-278)||(37485562-37485708)
chr2 (169-286)||(41595239-41595356)
chr2 (131-233)||(13349600-13349702)
chr2 (131-245)||(19695466-19695580)
[»] chr8 (13 HSPs)
chr8 (131-276)||(32962016-32962161)
chr8 (137-285)||(37246131-37246278)
chr8 (138-285)||(43596799-43596946)
chr8 (138-285)||(16295305-16295452)
chr8 (138-285)||(16303007-16303154)
chr8 (137-285)||(15268592-15268740)
chr8 (169-233)||(11657003-11657067)
chr8 (131-233)||(16456456-16456558)
chr8 (205-285)||(40953263-40953343)
chr8 (174-249)||(8491102-8491176)
chr8 (130-193)||(42180461-42180524)
chr8 (170-215)||(511650-511695)
chr8 (187-255)||(27696248-27696316)
[»] chr3 (10 HSPs)
chr3 (129-276)||(28457835-28457982)
chr3 (156-285)||(21748442-21748571)
chr3 (137-285)||(7818464-7818611)
chr3 (130-286)||(40701072-40701228)
chr3 (138-264)||(21495053-21495178)
chr3 (131-285)||(33072584-33072738)
chr3 (130-226)||(46663163-46663259)
chr3 (181-221)||(27488469-27488509)
chr3 (136-239)||(41865803-41865906)
chr3 (137-285)||(45853153-45853299)
[»] chr7 (10 HSPs)
chr7 (137-285)||(18503126-18503274)
chr7 (138-275)||(15673010-15673149)
chr7 (169-278)||(34703033-34703142)
chr7 (190-286)||(6110160-6110256)
chr7 (135-256)||(32585825-32585946)
chr7 (137-239)||(25102600-25102707)
chr7 (131-233)||(24429348-24429450)
chr7 (152-250)||(3480809-3480908)
chr7 (157-246)||(15524263-15524351)
chr7 (162-239)||(28428933-28429010)
[»] scaffold0817 (1 HSPs)
scaffold0817 (137-198)||(1-62)
[»] scaffold0957 (1 HSPs)
scaffold0957 (174-250)||(1659-1735)
[»] scaffold0702 (1 HSPs)
scaffold0702 (178-286)||(4020-4127)
[»] scaffold0662 (1 HSPs)
scaffold0662 (178-286)||(3975-4082)


Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 3767583 - 3767851
Alignment:
Q  19 gtagggtacgtatttttctaactatttcannnnnnnaacaagtaaaaatgagattatatataaacaccaacgaagaggccttaaaagcacccggtgtacc 118  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3767583 gtagggtacgtatttttctaactatttcatttttttaacaagtaaaaatgagattatatataaacaccaacgaagaggccttaaaagcacccggtgtacc 3767682  T
Q  119 a-caaagacctcaagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagt 217  Q
    | |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3767683 aacaaagacctcaagggtccgtttgatggtcaggatagggagatatgatatgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagt 3767782  T
Q  218 gataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3767783 gataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatatcataagtataa 3767851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 276
Target Start/End: Complemental strand, 45499379 - 45499233
Alignment:
Q  130 aagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaa 229  Q
    |||||| ||| ||||| || ||||||||||  | |||| |||| ||||||||||| || |||||||  |||||||||||||||||| |||||||||||||    
T  45499379 aagggtccgtgtgatgatcaggatagggaggcaagatatgatatattaatcatattcttcttaaatcacatgtttgatgcaccaaaatgataggataaaa 45499280  T
Q  230 taaatcatttctctatcttattttgactttcctttgtcatttatatc 276  Q
    |||| |||||||||||| |||  |||||||||||||| |||||||||    
T  45499279 taaaccatttctctatcctatcctgactttcctttgtaatttatatc 45499233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 286
Target Start/End: Complemental strand, 34513924 - 34513800
Alignment:
Q  162 atgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcc 261  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||| |||||| |||  |||||||||    
T  34513924 atgatatgatacattaattatatcctgcttaaatctcatgtttgatgcaccaaatggataggataaaataaaccatttttctatcatatcctgactttcc 34513825  T
Q  262 tttgtcatttatatcataagtataa 286  Q
    ||||| |||| |||| | |||||||    
T  34513824 tttgtaatttctatcctgagtataa 34513800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 286
Target Start/End: Complemental strand, 28116121 - 28115972
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    ||||| |||||  ||||||||||  |||||| ||||||||||||||||  ||||||||| |||| ||||||||||| |||||||| ||||||||||| ||    
T  28116121 cgtttaatggtgaggatagggagccatgatatgatacattaatcatattatgcttaaatctcatatttgatgcacctaagtgataagataaaataaacca 28116022  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    |||  ||||| |||  | |||||||||||| |||| |||| | |||||||    
T  28116021 ttttcctatcctatcctaactttcctttgtaatttctatcctgagtataa 28115972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 285
Target Start/End: Original strand, 34940259 - 34940405
Alignment:
Q  139 tttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatt 238  Q
    |||||||||| ||||||||||| |  |||  ||||||||||||| | ||  |||||| |||||||||||||||||||  |||||||||||||||| ||||    
T  34940259 tttgatggtcaggatagggagacagaatataatacattaatcatgttctctttaaatctcatgtttgatgcaccaaaaggataggataaaataaaccatt 34940358  T
Q  239 tctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |   |||| |||  |||||||||||||| |||| |||| | ||||||    
T  34940359 ttcatatcctatcctgactttcctttgtaatttctatcctgagtata 34940405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 37910797 - 37910709
Alignment:
Q  198 catgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    ||||||||||||||||||| |||| |||||||||||||||||  ||||| |||  |||||||| ||||| ||||||||||| |||||||    
T  37910797 catgtttgatgcaccaaagggatacgataaaataaatcattttcctatcatatcctgactttcgtttgtaatttatatcatgagtataa 37910709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 21342242 - 21342155
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggat 225  Q
    ||||||||| |  ||||| |||| | |||| ||||||||||||||||||||||||||| ||||||||||||||| |||  ||||||||    
T  21342242 gtttgatggccaagatagagagacaggatatgatacattaatcatatcctgcttaaatctcatgtttgatgcacaaaatggataggat 21342155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 17702135 - 17702243
Alignment:
Q  178 atcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaa-tcatttctctatcttattttgactttcctttgtcatttatatc 276  Q
    |||||||| | ||||||| |||||||||||||||||||| |||| ||||||||||| |  ||||| |||| ||| ||| ||||||||||| |||| ||||    
T  17702135 atcatatctttcttaaatctcatgtttgatgcaccaaagagataagataaaataaactgttttct-tatcctatcttgtctttcctttgtaatttttatc 17702233  T
Q  277 ataagtataa 286  Q
     | |||||||    
T  17702234 ctgagtataa 17702243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 37911248 - 37911176
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgc 209  Q
    |||||||||||| |||||||||||   |||| |||||||||| |||||||| || |||| |||||||||||||    
T  37911248 cgtttgatggtcaggatagggagacgggatatgatacattaaccatatcctactgaaatctcatgtttgatgc 37911176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 53923655 - 53923731
Alignment:
Q  150 ggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggata 226  Q
    ||||| |||||||  ||| |||| ||||||||||| |  ||||| | |||||||||||||||||||| |||||||||    
T  53923655 ggataaggagataaaatatgatatattaatcatattcgacttaattatcatgtttgatgcaccaaagagataggata 53923731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 11138663 - 11138706
Alignment:
Q  190 ttaaatttcatgtttgatgcaccaaagtgataggataaaataaa 233  Q
    |||||| ||||||||||| || ||||||||||||||||||||||    
T  11138663 ttaaatatcatgtttgatacatcaaagtgataggataaaataaa 11138706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 3692698 - 3692642
Alignment:
Q  179 tcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatc 235  Q
    ||||||| | ||||||| |||||||||||||| ||||| |||| |||| ||||||||    
T  3692698 tcatatcatacttaaatctcatgtttgatgcatcaaagagataagatacaataaatc 3692642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 53923745 - 53923781
Alignment:
Q  197 tcatgtttgatgcaccaaagtgataggataaaataaa 233  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  53923745 tcatgttcgatgcaccaaagagataggataaaataaa 53923781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 29860834 - 29860982
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||||||| | | ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  29860834 cgtttgatggccagtatagggagacatgatatgatacattaatcatattctgcttaaatttcatgtttgatgcaccaaagagataggataaaataaacca 29860933  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |||| ||||| |||  |||||||||||||| ||||||||| | ||||||    
T  29860934 tttccctatcatatcatgactttcctttgtaatttatatcctgagtata 29860982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 131 - 271
Target Start/End: Complemental strand, 42684114 - 42683974
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| | ||| ||||| |||| ||||||||    
T  42684114 agggttcgtttgatggttaggatagggagacatgatatgatacattaatcatatcctgcttaaatctcatgtttcaagcatcaaagggataagataaaat 42684015  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcattt 271  Q
    ||||||||| |||||| |||  |||||||||||||| ||||    
T  42684014 aaatcatttttctatcatatcctgactttcctttgtaattt 42683974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 138 - 271
Target Start/End: Complemental strand, 7883969 - 7883836
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    ||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||| |||    
T  7883969 gtttgatggtcaggatagggagacaggatatgatacattaatcatatcctgcttaaatcttatgtttgatgcatcaaagggataggataaaataaaccat 7883870  T
Q  238 ttctctatcttattttgactttcctttgtcattt 271  Q
    ||  ||||| |||| ||| |||||||||| ||||    
T  7883869 tttcctatcctattctgaatttcctttgtaattt 7883836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 286
Target Start/End: Complemental strand, 33008189 - 33008042
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    ||||||||||| ||||||||||| | |||| ||||||||||| ||||||||||||||| ||| |||||||  ||||||| ||||||||||||||||||||    
T  33008189 gtttgatggtcaggatagggagacaggatatgatacattaattatatcctgcttaaatatcacgtttgatagaccaaagggataggataaaataaatcat 33008090  T
Q  238 ttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    || |||||| |||  |||||||||||||| |||| |||| | |||||||    
T  33008089 tt-tctatcatatcctgactttcctttgtaatttttatcctgagtataa 33008042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 276
Target Start/End: Complemental strand, 5868472 - 5868327
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| |||||||||||| ||||||||||| | |||| |||| |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  5868472 agggtccgtttgatggtcaggatagggagacaagatatgatatattaatcacatcctacttaaatctcatgtttgatgcaccaaagagataggataaaat 5868373  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcatttatatc 276  Q
    ||| |||||  ||||| |||   ||||||||||||| |||| ||||    
T  5868372 aaaccattttcctatcctatcccgactttcctttgtaatttctatc 5868327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 271
Target Start/End: Complemental strand, 15922379 - 15922246
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    ||||||||||| |||||| || | | |||| ||||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||| ||    
T  15922379 gtttgatggtcaggatagagatacaggatatgatacattaatcatatcttgcttaaatctcatgtttgatgcatcaaagtgatatgataaaataaattat 15922280  T
Q  238 ttctctatcttattttgactttcctttgtcattt 271  Q
    || |||||| |||  |||||||||||||| ||||    
T  15922279 ttttctatcatatcatgactttcctttgtaattt 15922246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 33134090 - 33134201
Alignment:
Q  174 attaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtcatttat 273  Q
    |||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||| |||||  ||||| |||  |||||||||||||| |||| |    
T  33134090 attaatcatatcctgcttaaatcttatgtttaatgcaccaaagggataggataaaataaaccattttcctatcctatcctgactttcctttgtaatttct 33134189  T
Q  274 atcataagtata 285  Q
    ||||| ||||||    
T  33134190 atcatgagtata 33134201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 286
Target Start/End: Complemental strand, 25347219 - 25347109
Alignment:
Q  176 taatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatat 275  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| |||||  ||||| |||  ||| |||||||||| |||| |||    
T  25347219 taatcatatcctccttaaatctcatgtttgatgcaccaaagggataggataaaataaaccattttcctatcatatcctgattttcctttgtaatttctat 25347120  T
Q  276 cataagtataa 286  Q
    ||| |||||||    
T  25347119 cattagtataa 25347109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 2498915 - 2499041
Alignment:
Q  150 ggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatctta 249  Q
    |||||| ||||  ||||| |||| ||||||||||| || ||||||| |||||||||||||||| ||| |||| | ||||||||||||||| |||||||||    
T  2498915 ggatagagagacgtgatatgatatattaatcatattctacttaaatatcatgtttgatgcacccaagagatatggtaaaataaatcatttttctatctta 2499014  T
Q  250 ttttgactttcctttgtcatttatatc 276  Q
    | |||||| | |||||| |||| ||||    
T  2499015 tcttgactattctttgtaatttttatc 2499041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 31077809 - 31077963
Alignment:
Q  132 gggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaata 231  Q
    |||| ||||| |||||| ||||||  ||||| |||| |||||||||||||||| || ||||||| | |||||||||||||||||| | ||||||||||||    
T  31077809 gggtccgtttaatggtcaggatagacagataggatatgatacattaatcatattctacttaaatctaatgtttgatgcaccaaagggttaggataaaata 31077908  T
Q  232 aatcatttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    ||  ||||   |||  |||  |||||||||||||| ||||||||| | |||||||    
T  31077909 aactattttcttattctatcatgactttcctttgtaatttatatcctgagtataa 31077963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 21092537 - 21092482
Alignment:
Q  175 ttaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  21092537 ttaatcatatcctgtttaaatttcatgtttgatgcaccaaatggataggataaaat 21092482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 130 - 275
Target Start/End: Original strand, 49549473 - 49549618
Alignment:
Q  130 aagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaa 229  Q
    |||||| |||||||||||| |||||| |||  | |||| ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  49549473 aagggtccgtttgatggtcaggatagtgaggcaagatatgatacattaatcatatcctgcttaaatctcatatttgatgcaccaaagggataggataaaa 49549572  T
Q  230 taaatcatttctctatcttattttgactttcctttgtcatttatat 275  Q
    ||||||||||| ||||| |||  |||||||||||||| ||||||||    
T  49549573 taaatcatttccctatcatatcctgactttcctttgtaatttatat 49549618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 286
Target Start/End: Complemental strand, 28623108 - 28622959
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||||||||| ||||| ||||||||||  |    
T  28623108 cgtttgatggtcaggatagggagacatgatatgatacattaatcatatcctatttaaattccatgtttgatgcaccaaagggatagaataaaataaacta 28623009  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    ||| |||||| |||  |||||||||||||| |||| |||| | |||||||    
T  28623008 tttttctatcctatcctgactttcctttgtaatttttatcctgagtataa 28622959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 285
Target Start/End: Complemental strand, 37347213 - 37347059
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| |||||||||||| ||||||||||| |  ||| ||||||||||||||||| ||||||||| | |||||||||||||||||| |||| ||||||||    
T  37347213 agggtgcgtttgatggtcaggatagggagacagaatatgatacattaatcatatcttgcttaaatcttatgtttgatgcaccaaagggatatgataaaat 37347114  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    ||| ||||| |||||| |||  ||| |||||||||| |||| |||| | ||||||    
T  37347113 aaaccatttttctatcctatcctgattttcctttgtaatttctatcctgagtata 37347059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 19909968 - 19910093
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||||||||  |||||| |||| |  ||| ||||||||||| ||||  ||||||||| |||||||||||||| ||||| |||| ||||||||||| ||    
T  19909968 cgtttgatggttaggatagagagaca--atatgatacattaattatattgtgcttaaatatcatgtttgatgcatcaaagagataagataaaataaacca 19910065  T
Q  237 tttctctatcttattttgactttccttt 264  Q
    ||| |||||| |||  ||||||||||||    
T  19910066 tttttctatcgtatactgactttccttt 19910093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 48527377 - 48527446
Alignment:
Q  164 gatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaa 233  Q
    |||| |||| ||| |||||||| |||||||||||||||||||||||| ||||  |||| |||||||||||    
T  48527377 gatatgatatatttatcatatcttgcttaaatttcatgtttgatgcatcaaaaagatatgataaaataaa 48527446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 52267631 - 52267692
Alignment:
Q  178 atcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcattt 239  Q
    ||||||| || ||||||||||||||| |||| ||||||| |||| |||||||||||||||||    
T  52267631 atcatattctacttaaatttcatgttcgatgtaccaaagagatatgataaaataaatcattt 52267692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 10306987 - 10306886
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    ||||||||||| | ||||| | ||||||||  ||| |||||||||||  | | ||||| |||||||||||||| ||||  || || |||||||||| |||    
T  10306987 gtttgatggtcagtataggaaaatatgatataatatattaatcatattattcataaatctcatgtttgatgcatcaaatagagagaataaaataaaccat 10306888  T
Q  238 tt 239  Q
    ||    
T  10306887 tt 10306886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 35509016 - 35508891
Alignment:
Q  151 gatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttat 250  Q
    |||||||||| |  ||| |||| ||| |||||||  | ||||||| ||||||||||| ||| |||  |||||||||||||||| |||||   |||| |||    
T  35509016 gatagggagacagtatatgatatatttatcatattatacttaaatctcatgtttgatccactaaatagataggataaaataaaccattttcttatcctat 35508917  T
Q  251 tttgactttcctttgtcatttatatc 276  Q
    |  ||||| ||||||| |||| ||||    
T  35508916 tacgacttgcctttgtaatttttatc 35508891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 12856996 - 12856940
Alignment:
Q  202 tttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactt 258  Q
    |||||||||| ||||  ||| ||||||||||||||||| || ||||||| |||||||    
T  12856996 tttgatgcactaaagatatatgataaaataaatcatttttcaatcttatcttgactt 12856940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 134 - 285
Target Start/End: Original strand, 23404450 - 23404601
Alignment:
Q  134 gttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaa 233  Q
    ||||| ||||||| | ||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23404450 gttcgattgatggccaggatagggagacatgatatgatacattaataatatcctgcataaatttcatgtttgatgcaccaaagagataggataaaataaa 23404549  T
Q  234 tcatttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
     ||||||  |||| |||  |||||||||||||| ||||||||| | ||||||    
T  23404550 ccatttccatatcatatcctgactttcctttgtaatttatatcttgagtata 23404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 271
Target Start/End: Original strand, 12255070 - 12255211
Alignment:
Q  130 aagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaa 229  Q
    |||||| |||||||||||| ||||||||||| |  ||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  12255070 aagggtgcgtttgatggtcaggatagggagacagaatatgatacattaatcatatcctgcttaaatctcatgtttgatgcaccaaagggatgggataaaa 12255169  T
Q  230 taaatcatttctctatcttattttgactttcctttgtcattt 271  Q
    |||| |||||  ||||| |||| || ||||||||||| ||||    
T  12255170 taaaccattttcctatcctattctgtctttcctttgtaattt 12255211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 131 - 276
Target Start/End: Complemental strand, 29979597 - 29979453
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| |||||||||||| |||| |||||| | || | ||||||||||||||||| || |||||| |||||||||||||||||||| |||| ||||||||    
T  29979597 agggtccgtttgatggtcaggatcgggagaca-gaaatgatacattaatcatatcatgtttaaatctcatgtttgatgcaccaaagggatatgataaaat 29979499  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcatttatatc 276  Q
    ||| |||||  ||||| |||| ||| |||||||||| |||| ||||    
T  29979498 aaaccattttcctatcatattatgattttcctttgtaatttctatc 29979453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 32329317 - 32329455
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||||||||| ||||||||||  |  ||| |||||||||||| ||| ||| ||||||  ||||||||||||||||||| |||| ||||||||||| ||    
T  32329317 cgtttgatggtcaggatagggaggcagaatatgatacattaatcgtattctgtttaaatcgcatgtttgatgcaccaaag-gatatgataaaataaacca 32329415  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatc 276  Q
    |||   ||||||||  |||||||||||||| |||||||||    
T  32329416 ttttcatatcttatcctgactttcctttgtaatttatatc 32329455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 9314806 - 9314907
Alignment:
Q  169 gatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtca 268  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||| |||||  ||||| |||  |||||||||||||| |    
T  9314806 gatacattaatcatatcctgcttaaatctcatgtttgatgcaccaaatggataggat-aaataaaccattttcctatcctatcctgactttcctttgtaa 9314904  T
Q  269 ttt 271  Q
    |||    
T  9314905 ttt 9314907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 10789618 - 10789527
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaa 229  Q
    ||||||||||| |||||  |||| |  ||| |||||||||||||||| ||||||||||||||| |||||||||| | || |||| |||||||    
T  10789618 gtttgatggtcaggataaagagacagaatatgatacattaatcatattctgcttaaatttcatatttgatgcacgagagagataagataaaa 10789527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 12267316 - 12267413
Alignment:
Q  139 tttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||| ||| | ||| ||||| ||||||  ||| |||||| |||||||| |||||||| |||||||||||||||||  |||| ||| ||||||||||    
T  12267316 tttgattgtcagaatatggagacatgatattatatattaattatatcctgtttaaattttatgtttgatgcaccaaacagatatgatgaaataaatca 12267413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 131 - 285
Target Start/End: Complemental strand, 40619897 - 40619743
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  40619897 agggtgcgtttgatggtcaggatagagagataggatatgatacattaatcatatcctgcttaaatctcatgtttgatgcaccaaagggatatgataaaat 40619798  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    ||| ||||| |||||| |||  ||||||||||| || |||| |||| | ||||||    
T  40619797 aaaccatttttctatcatatcctgactttccttcgtaatttctatcctgagtata 40619743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 271
Target Start/End: Original strand, 27338700 - 27338821
Alignment:
Q  150 ggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatctta 249  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||| ||||||||||| ||||| |||||| ||    
T  27338700 ggatagggagataggatatgatacattaatcatatcctacttaaatctcatgtttgatgcactaaaatgatatgataaaataaaccatttttctatccta 27338799  T
Q  250 ttttgactttcctttgtcattt 271  Q
    |  |||||||||||||| ||||    
T  27338800 tcctgactttcctttgtaattt 27338821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 286
Target Start/End: Complemental strand, 13996355 - 13996199
Alignment:
Q  130 aagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaa 229  Q
    |||||| |||||||||||| ||||||| |||   |||| ||||||||||| ||||||| ||||||| |||||||||||||||||||| || | |||||||    
T  13996355 aagggtgcgtttgatggtcaggataggaagacgggatatgatacattaattatatcctccttaaatctcatgtttgatgcaccaaagggacatgataaaa 13996256  T
Q  230 taaatcatttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    |||||||| | |||||| |||  |||||||||||||| |||| |||| | |||||||    
T  13996255 taaatcatgtttctatcatatcctgactttcctttgtaatttctatcctgagtataa 13996199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 278
Target Start/End: Original strand, 37485562 - 37485708
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    |||||||||||||||||  |||||| |||| | ||||  ||| |||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||    
T  37485562 agggttcgtttgatggta-ggatagagagacaagatataatatattaatcatatcctgcttaaatctcatgtttgatgcaccaaaaagatatgataaaat 37485660  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcatttatatcat 278  Q
    ||| |||||  ||||| |||  |||||||||||||| |||| ||||||    
T  37485661 aaaccattttcctatcatatcctgactttcctttgtaatttctatcat 37485708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 286
Target Start/End: Original strand, 41595239 - 41595356
Alignment:
Q  169 gatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtca 268  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||| ||| | |||||| |||| ||||||||| |||| |    
T  41595239 gatacattaatcatatcgtgcttaaatctcatgtttgatgcaccaaagagattggataaaataaaccatatttctatcatattctgactttccattgtaa 41595338  T
Q  269 tttatatcataagtataa 286  Q
    ||| |||| | |||||||    
T  41595339 tttctatcctgagtataa 41595356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 13349702 - 13349600
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| |||||||| ||| ||||||| ||| | |||| ||||||||||| ||||||| ||||||| |||||||||||||||||||  |||||||||||||    
T  13349702 agggtccgtttgatagtcaggataggaagacaggatatgatacattaattatatcctacttaaatctcatgtttgatgcaccaaatggataggataaaat 13349603  T
Q  231 aaa 233  Q
    |||    
T  13349602 aaa 13349600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 19695466 - 19695580
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| ||||||||| || |||||| |||| | |||| ||||||||||||||||||| | ||||| |||||||||||||||||||  |||||| || |||    
T  19695466 agggtgcgtttgatgatcaggatagagagacaggatatgatacattaatcatatcctacgtaaatctcatgtttgatgcaccaaatggataggctagaat 19695565  T
Q  231 aaatcatttctctat 245  Q
    ||| ||||| |||||    
T  19695566 aaaccatttttctat 19695580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 131 - 276
Target Start/End: Original strand, 32962016 - 32962161
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||||    
T  32962016 agggtgcgtttgatggtcaggatagggagatatgatatgatacattaatcatatcctgcttaaatctcatgtttgatgcaccaatgggatagaataaaat 32962115  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcatttatatc 276  Q
    |||  ||||  ||||| |||  |||||||||||||| |||| ||||    
T  32962116 aaactattttcctatcatatcctgactttcctttgtaatttctatc 32962161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 37246131 - 37246278
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||||||||   |||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||||||||||  ||    
T  37246131 cgtttgatggtaaagatagggagacatgatatgatacattaatcatatcctgcttaaatatcatgtttgatgcactaaaaagataggataaaataaccca 37246230  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |||| ||| | |||| |||||||||||||| ||||||||| | ||||||    
T  37246231 tttcccta-catattctgactttcctttgtaatttatatcttgagtata 37246278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 43596799 - 43596946
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    ||||||||| | ||||||||||  | |||| ||||||||||||||||||  ||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  43596799 gtttgatggccaggatagggagtcaggatatgatacattaatcatatccgacttaaatatcatgtttgatgcacgaaagagataggataaaataaatcat 43596898  T
Q  238 ttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    || |||||| |||   ||||||||||||| ||||||||| | ||||||    
T  43596899 ttttctatcatatcccgactttcctttgtaatttatatcctgagtata 43596946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 16295305 - 16295452
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    |||||||||||  ||||| |||| || ||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||  ||    
T  16295305 gtttgatggtcaagatagagagacataatatgatacattaatcatatcctgcttaaatatcatgtttgatgcactaaagagatagcatacaataaacaat 16295404  T
Q  238 ttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    ||| ||||| |||  |||||||||||||| ||||||||| | ||||||    
T  16295405 ttccctatcatatcctgactttcctttgtaatttatatcctgagtata 16295452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 16303007 - 16303154
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    |||||||||||  ||||| |||| || ||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||  ||    
T  16303007 gtttgatggtcaagatagagagacataatatgatacattaatcatatcctgcttaaatatcatgtttgatgcactaaagagatagcatacaataaacaat 16303106  T
Q  238 ttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    ||| ||||| |||  |||||||||||||| ||||||||| | ||||||    
T  16303107 ttccctatcatatcctgactttcctttgtaatttatatcctgagtata 16303154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 15268592 - 15268740
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||||||||| ||||| ||||| | |||| |||||||||||||||||||||| |||| ||||||||||| || ||||  |||||||||||||||| ||    
T  15268592 cgtttgatggtcaggataaggagacaggatatgatacattaatcatatcctgctgaaatctcatgtttgatacaacaaatggataggataaaataaacca 15268691  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |||  ||||| |||   ||||||||||||| |||| |||  ||||||||    
T  15268692 ttttcctatcctatcccgactttcctttgtaatttttattctaagtata 15268740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 11657067 - 11657003
Alignment:
Q  169 gatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaa 233  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||    
T  11657067 gatacattaatcatatcctgcttaaatctcatgtttgatgtaccaaagggatatgataaaataaa 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 16456456 - 16456558
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    |||||||||||||||||| ||||| |||||    ||| |||| || |||||||| || ||||||| |||||||||||||||||||| |||| ||||||||    
T  16456456 agggttcgtttgatggtcaggataaggagacgaaatatgatatatcaatcatattctacttaaatatcatgtttgatgcaccaaagagataagataaaat 16456555  T
Q  231 aaa 233  Q
    |||    
T  16456556 aaa 16456558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 40953263 - 40953343
Alignment:
Q  205 gatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |||||||||||| |||| ||| ||||||||||||| |||||| |||  |||||||||||||| |||| |||| | ||||||    
T  40953263 gatgcaccaaagagatatgatgaaataaatcatttttctatcatatcctgactttcctttgtaatttttatcctgagtata 40953343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 8491176 - 8491102
Alignment:
Q  174 attaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatctta 249  Q
    |||||||||||| || |||||| |||| ||||||| | ||||| |||| ||||||||||||||||| |||||||||    
T  8491176 attaatcatatcttgtttaaatatcatatttgatgtatcaaagagatatgataaaataaatcattt-tctatctta 8491102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 42180461 - 42180524
Alignment:
Q  130 aagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaa 193  Q
    |||||| |||||||||||| ||||||||||| |  ||| |||||||||||||||||| ||||||    
T  42180461 aagggtgcgtttgatggtcaggatagggagacagaatatgatacattaatcatatccagcttaa 42180524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 511650 - 511695
Alignment:
Q  170 atacattaatcatatcctgcttaaatttcatgtttgatgcaccaaa 215  Q
    ||||||| || ||||||||||| |||||||||||||||||||||||    
T  511650 atacatttattatatcctgcttgaatttcatgtttgatgcaccaaa 511695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 27696248 - 27696316
Alignment:
Q  187 tgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttga 255  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||||  ||||  ||||||||| ||||    
T  27696248 tgcttaaatctcatgtttgatgcaccaaatggatatgataaaataaactattttcctatcttatcttga 27696316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 276
Target Start/End: Complemental strand, 28457982 - 28457835
Alignment:
Q  129 caagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaa 228  Q
    ||||||| |||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||| ||||||    
T  28457982 caagggtccgtttgatggtcaggatagggagacaggatatgatacattaatcatatcctgcttaaatcttgtgtttgatgcaccaaagtgatatgataaa 28457883  T
Q  229 ataaatcatttctctatcttattttgactttcctttgtcatttatatc 276  Q
    ||||| ||||| ||||||||||    |||||||||||| |||| ||||    
T  28457882 ataaaccatttttctatcttatcccaactttcctttgtaatttctatc 28457835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 285
Target Start/End: Complemental strand, 21748571 - 21748442
Alignment:
Q  156 ggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttga 255  Q
    ||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||| || |||||  ||||| |||| |||    
T  21748571 ggagacatgatatgatacattaatcatattctgcttaaatctcatgtttgatgcaccaaaatgatatgataaaattaaccattttcctatcctattatga 21748472  T
Q  256 ctttcctttgtcatttatatcataagtata 285  Q
     |||||||||| |||| |||| ||||||||    
T  21748471 ttttcctttgtaatttctatcctaagtata 21748442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 285
Target Start/End: Complemental strand, 7818611 - 7818464
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    ||||||||||||  |||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||| ||| |||| ||||| |||||||||| ||    
T  7818611 cgtttgatggtcaagatagggatatatgatatgatacattaatcatattctgcttaaatctcatgtttgatacactaaagagatagaataaaataaa-ca 7818513  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |||  ||||| |||| | |||||||||||| |||| |||| ||| ||||    
T  7818512 ttttactatcctattctaactttcctttgtaatttctatcctaaatata 7818464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 286
Target Start/End: Complemental strand, 40701228 - 40701072
Alignment:
Q  130 aagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaa 229  Q
    |||||| |||||||||||| ||||||  ||| | |||| ||||||||||||||||||||||||||| ||||||||||||| |||||   ||| |||||||    
T  40701228 aagggtccgtttgatggtcaggatagaaagacaggatatgatacattaatcatatcctgcttaaatctcatgtttgatgctccaaaagtatatgataaaa 40701129  T
Q  230 taaatcatttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    |||| ||||| ||| || |||  |||||||||||||| |||| |||| | |||||||    
T  40701128 taaaccatttttctgtcatatcctgactttcctttgtaatttttatcctgagtataa 40701072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 138 - 264
Target Start/End: Original strand, 21495053 - 21495178
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcat 237  Q
    |||||||| ||  |||||||||| |||||| |||| |||||||||||| || |||||| ||||||||||||||||||| |||||||||||||||||  ||    
T  21495053 gtttgatgatcacgatagggagacatgatatgatatattaatcatatcttg-ttaaatctcatgtttgatgcaccaaattgataggataaaataaacgat 21495151  T
Q  238 ttctctatcttattttgactttccttt 264  Q
    || |||||| ||| ||| |||||||||    
T  21495152 ttttctatcatatcttggctttccttt 21495178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 285
Target Start/End: Original strand, 33072584 - 33072738
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    ||||| |||||||| ||| ||||||||||| |  ||| |||||||||||||||||||  ||||||||||||||||||||||| |||  ||| ||||||||    
T  33072584 agggtgcgtttgatagtcaggatagggagacaaaatatgatacattaatcatatcctatttaaatttcatgtttgatgcacctaaggaatatgataaaat 33072683  T
Q  231 aaatcatttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    ||| |||||  ||||| |||  | | |||||||||| |||| |||| | ||||||    
T  33072684 aaaccattttcctatcatatcctaagtttcctttgtaatttctatcctgagtata 33072738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 46663163 - 46663259
Alignment:
Q  130 aagggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggata 226  Q
    ||||| ||||| ||||||| ||||| ||||| |  ||| |||||||| |||||||| || |||||| |||| ||||||||||||||  |||||||||    
T  46663163 aaggggtcgttagatggtcgggataaggagacaatatatgatacatttatcatatcatgtttaaatctcatatttgatgcaccaaacagataggata 46663259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 27488469 - 27488509
Alignment:
Q  181 atatcctgcttaaatttcatgtttgatgcaccaaagtgata 221  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  27488469 atatcctggttaaatttcatgtttgatgcaccaaagagata 27488509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 41865906 - 41865803
Alignment:
Q  136 tcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatc 235  Q
    |||||||||||   ||||||||||||| |||| |||| | | ||||||||| |||||||| |||| |||||| ||  |||| ||||  ||| ||||||||    
T  41865906 tcgtttgatggcaaggatagggagataagatatgataaaattatcatatcccgcttaaatctcatatttgattcataaaagggatataatataataaatc 41865807  T
Q  236 attt 239  Q
    ||||    
T  41865806 attt 41865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 285
Target Start/End: Complemental strand, 45853299 - 45853153
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    |||||||||||| |||  |||||| |  ||| ||||||||||| ||||||| ||||||| || | |||| ||||||||||  |||  |||||||||| ||    
T  45853299 cgtttgatggtcagga--gggagacagaatatgatacattaattatatccttcttaaatctcttatttgctgcaccaaagatatataataaaataaacca 45853202  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |||   | || |||| ||||||||| |||| |||| |||| | ||||||    
T  45853201 ttttcttttcctattatgactttccattgtaatttttatcgtgagtata 45853153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 137 - 285
Target Start/End: Complemental strand, 18503274 - 18503126
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatca 236  Q
    ||||||||||||  ||||| |||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||    
T  18503274 cgtttgatggtcatgatagagagatcggatatgatacattaatcatatcctgcttaaatatcatgtttgatgcaccaaagagataggataaaataaacca 18503175  T
Q  237 tttctctatcttattttgactttcctttgtcatttatatcataagtata 285  Q
    |||  ||||| |||  ||| |||| ||||| |||| |||| | ||||||    
T  18503174 ttttcctatcctatcctgattttcatttgtaatttctatcttgagtata 18503126  T

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Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 275
Target Start/End: Complemental strand, 15673149 - 15673010
Alignment:
Q  138 gtttgatggtccggatagggagatatgatacgatacattaatcatat--cctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatc 235  Q
    |||||||||||  |||||||||  | |||| ||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||| |    
T  15673149 gtttgatggtcaagatagggaggcaggatatgatacattaatcatatatcctgcttaaatctcatgtttgatgcaccaaagagataggataaaataaacc 15673050  T
Q  236 atttctctatcttattttgactttcctttgtcatttatat 275  Q
    ||||  ||||| |||  |||||||||||||  ||||||||    
T  15673049 attttcctatcatatcctgactttcctttgcaatttatat 15673010  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 34703033 - 34703142
Alignment:
Q  169 gatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtca 268  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||   ||| |||||||||||  ||||  ||||| |||  |||||||||||||| |    
T  34703033 gatacattaatcatatcctgcttaaatcacatgtttgatgcaccaaaagtatatgataaaataaactattttcctatcatatcctgactttcctttgtaa 34703132  T
Q  269 tttatatcat 278  Q
    ||||||||||    
T  34703133 tttatatcat 34703142  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 6110160 - 6110256
Alignment:
Q  190 ttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatatcataagtataa 286  Q
    |||||| |||||||||||||| ||||| |||| ||||||||||||||||| |||||| ||| || |||||||||||| ||||||||| | |||||||    
T  6110160 ttaaatctcatgtttgatgcatcaaagggataagataaaataaatcatttttctatcctatcttaactttcctttgtaatttatatcctgagtataa 6110256  T

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Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 32585946 - 32585825
Alignment:
Q  135 ttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaat 234  Q
    |||||||||||| |  |||||||||  |  ||| ||||||  |||||||||||| |||||| |||||||||||||| |||| ||||| ||||||||||||    
T  32585946 ttcgtttgatggccacgatagggaggcaaaatatgatacaagaatcatatcctgtttaaatctcatgtttgatgcaacaaaatgatatgataaaataaat 32585847  T
Q  235 catttctctatcttattttgac 256  Q
     ||||  |||||||||| ||||    
T  32585846 aattttcctatcttattctgac 32585825  T

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Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 25102600 - 25102707
Alignment:
Q  137 cgtttgatggtccggatagggaga-----tatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaata 231  Q
    |||||||||||| |||||||||||     ||||||| |||| ||| |||| || || ||||||| |||||||||||||||||||  ||||||||||||||    
T  25102600 cgtttgatggtcgggatagggagacatgatatgatatgatatatttatcacattctacttaaatctcatgtttgatgcaccaaatagataggataaaata 25102699  T
Q  232 aatcattt 239  Q
    ||| ||||    
T  25102700 aattattt 25102707  T

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Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 24429450 - 24429348
Alignment:
Q  131 agggttcgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaat 230  Q
    |||||| ||||||||||| |||||| ||| || |||| || | ||  ||||||||||| ||||||  |||||||||||||| |||| |||||||||||||    
T  24429450 agggtttgtttgatggtcaggatagagagttaagatatgacatatctatcatatcctgtttaaatcacatgtttgatgcactaaagggataggataaaat 24429351  T
Q  231 aaa 233  Q
    |||    
T  24429350 aaa 24429348  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 3480908 - 3480809
Alignment:
Q  152 atagggagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggata-aaataaatcatttctctatcttat 250  Q
    |||| ||||||||||| |||| |||||||||||| ||| ||||| |||||||| ||||| || |||||||  ||| |||||||||||||  |||||||||    
T  3480908 atagagagatatgatatgatatattaatcatatcatgcataaatctcatgtttaatgcatcatagtgataatatagaaataaatcattttcctatcttat 3480809  T

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Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 15524351 - 15524263
Alignment:
Q  157 gagatatgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatc 246  Q
    |||||| |||| |||| |||||||||||| |  |||||| ||||||||| ||||||| ||||| ||||| ||||||| ||||| ||||||    
T  15524351 gagataagatatgatatattaatcatatcttatttaaatctcatgtttggtgcaccagagtgagaggat-aaataaaccatttttctatc 15524263  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 28428933 - 28429010
Alignment:
Q  162 atgatacgatacattaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcattt 239  Q
    |||||| |||| ||| |||| ||| || |||||| | |||||| |||||||||||  |||||||||||||||| ||||    
T  28428933 atgatatgataaatttatcacatcatgtttaaatcttatgtttaatgcaccaaagaaataggataaaataaattattt 28429010  T

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Target: scaffold0817 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 62 - 1
Alignment:
Q  137 cgtttgatggtccggatagggagatatgatacgatacattaatcatatcctgcttaaatttc 198  Q
    |||||||||| | ||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  62 cgtttgatggccaggatagggagacatgatatgatacattaatcatattctgcttaaatttc 1  T

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Target: scaffold0957 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 1659 - 1735
Alignment:
Q  174 attaatcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttat 250  Q
    |||||||||||| |  |||||| | ||||||| |||||||||| |||||||| ||||||||||||| ||||||||||    
T  1659 attaatcatatcttatttaaatcttatgtttggtgcaccaaagagataggatgaaataaatcatttttctatcttat 1735  T

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Target: scaffold0702 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 286
Target Start/End: Complemental strand, 4127 - 4020
Alignment:
Q  178 atcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatatca 277  Q
    ||||||||| |||||||| |||||||||||||||||||| | | ||||||||||||  ||||  |||||||||  | ||||  |||||| |||| ||||     
T  4127 atcatatccggcttaaatatcatgtttgatgcaccaaagaggt-ggataaaataaactatttacctatcttatcctaacttatctttgtaatttttatct 4029  T
Q  278 taagtataa 286  Q
    |||||||||    
T  4028 taagtataa 4020  T

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Target: scaffold0662 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 3975 - 4082
Alignment:
Q  178 atcatatcctgcttaaatttcatgtttgatgcaccaaagtgataggataaaataaatcatttctctatcttattttgactttcctttgtcatttatatca 277  Q
    ||||||||| |||||||| |||||||||||||||||||| | | ||||||||||||  ||||  |||||||||  | ||||  |||||| |||| ||||     
T  3975 atcatatccggcttaaatatcatgtttgatgcaccaaagaggt-ggataaaataaactatttacctatcttatcctaacttatctttgtaatttttatct 4073  T
Q  278 taagtataa 286  Q
    |||||||||    
T  4074 taagtataa 4082  T

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