View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2180_low_56 (Length: 235)
Name: NF2180_low_56
Description: NF2180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2180_low_56 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 44261156 - 44261375
Alignment:
| Q |
1 |
ttcgagcagatctaaattcattgggctcaaatttgtcccctgaaggcataacttttagtttgttcacaacattgagagtgactgactattaacaccaccg |
100 |
Q |
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| T |
44261156 |
ttcgagcagatctaaattcattgggctcaaatttgtcccctgaaggcataacttttagtttgttcacaacattgagagtgactgactattaacaccaccg |
44261255 |
T |
|
| Q |
101 |
ataatttaaaaaacacaactcttccgatttacaaattcagacggagaaacgataccatatttttgtgtgtgtatggatggttaaatactaggggtgaatt |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
44261256 |
ataatttaaaaaacacaactcttccgatttagaaattcagacggagaaacgataccatatttttttgtgtgtatggatggttaaatactaggggtgaatt |
44261355 |
T |
|
| Q |
201 |
tcaatgggagaggttttaag |
220 |
Q |
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|||||||||||||||||||| |
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| T |
44261356 |
tcaatgggagaggttttaag |
44261375 |
T |
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