View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2181_low_2 (Length: 457)

Name: NF2181_low_2
Description: NF2181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2181_low_2
NF2181_low_2
[»] chr3 (5 HSPs)
chr3 (123-440)||(51738141-51738457)
chr3 (1-64)||(51738020-51738082)
chr3 (29-62)||(14494265-14494298)
chr3 (29-62)||(14975749-14975782)
chr3 (32-62)||(15430473-15430503)
[»] scaffold0447 (2 HSPs)
scaffold0447 (29-64)||(11621-11656)
scaffold0447 (29-64)||(7007-7042)
[»] chr8 (8 HSPs)
chr8 (29-64)||(23694378-23694413)
chr8 (29-62)||(26827109-26827142)
chr8 (32-62)||(19998002-19998032)
chr8 (29-62)||(17621975-17622008)
chr8 (29-62)||(18162610-18162643)
chr8 (29-62)||(21842476-21842509)
chr8 (29-62)||(33633042-33633075)
chr8 (29-62)||(38349356-38349389)
[»] chr7 (18 HSPs)
chr7 (29-64)||(4313826-4313861)
chr7 (29-62)||(3196859-3196892)
chr7 (29-62)||(12574611-12574644)
chr7 (29-62)||(14941198-14941231)
chr7 (29-62)||(15368791-15368824)
chr7 (29-62)||(38387614-38387647)
chr7 (31-62)||(41782395-41782426)
chr7 (31-62)||(48340049-48340080)
chr7 (29-60)||(48355029-48355060)
chr7 (32-62)||(16330331-16330361)
chr7 (29-62)||(5398338-5398371)
chr7 (31-64)||(9193120-9193153)
chr7 (29-62)||(13372161-13372194)
chr7 (29-62)||(13457288-13457321)
chr7 (29-62)||(15205514-15205547)
chr7 (29-62)||(33611718-33611751)
chr7 (29-57)||(4308409-4308437)
chr7 (29-61)||(12797721-12797753)
[»] scaffold1323 (1 HSPs)
scaffold1323 (29-62)||(140-173)
[»] scaffold0292 (1 HSPs)
scaffold0292 (29-62)||(1932-1965)
[»] scaffold0251 (1 HSPs)
scaffold0251 (29-62)||(18376-18409)
[»] scaffold0064 (1 HSPs)
scaffold0064 (29-62)||(49398-49431)
[»] scaffold0037 (1 HSPs)
scaffold0037 (29-62)||(48995-49028)
[»] scaffold0022 (2 HSPs)
scaffold0022 (29-62)||(80369-80402)
scaffold0022 (29-62)||(53403-53436)
[»] scaffold0018 (2 HSPs)
scaffold0018 (29-62)||(12029-12062)
scaffold0018 (29-62)||(18221-18254)
[»] scaffold0011 (2 HSPs)
scaffold0011 (29-62)||(163484-163517)
scaffold0011 (31-62)||(163096-163127)
[»] scaffold0005 (1 HSPs)
scaffold0005 (29-62)||(164332-164365)
[»] scaffold0001 (2 HSPs)
scaffold0001 (29-62)||(424462-424495)
scaffold0001 (29-62)||(182143-182176)
[»] chr6 (13 HSPs)
chr6 (29-62)||(12656764-12656797)
chr6 (29-62)||(18193297-18193330)
chr6 (31-64)||(18855243-18855276)
chr6 (29-62)||(19410889-19410922)
chr6 (29-62)||(25401917-25401950)
chr6 (31-62)||(18183843-18183874)
chr6 (29-62)||(12992534-12992567)
chr6 (29-62)||(14252482-14252515)
chr6 (29-62)||(17120115-17120148)
chr6 (29-62)||(18790511-18790544)
chr6 (33-62)||(18844990-18845019)
chr6 (29-58)||(23602737-23602766)
chr6 (29-62)||(35243819-35243852)
[»] chr5 (7 HSPs)
chr5 (29-62)||(23342989-23343022)
chr5 (32-62)||(14482999-14483029)
chr5 (32-62)||(24215366-24215396)
chr5 (29-59)||(24220986-24221016)
chr5 (29-62)||(3388641-3388674)
chr5 (29-62)||(20449274-20449307)
chr5 (34-62)||(20968339-20968367)
[»] chr4 (11 HSPs)
chr4 (29-62)||(14652927-14652960)
chr4 (29-62)||(14690276-14690309)
chr4 (31-62)||(3355865-3355896)
chr4 (31-62)||(16374123-16374154)
chr4 (31-62)||(45237787-45237818)
chr4 (29-62)||(12845518-12845551)
chr4 (29-62)||(15346526-15346559)
chr4 (29-62)||(16952454-16952487)
chr4 (29-58)||(24124696-24124725)
chr4 (29-62)||(40560037-40560070)
chr4 (30-62)||(18287601-18287633)
[»] chr2 (8 HSPs)
chr2 (29-62)||(5499225-5499258)
chr2 (29-62)||(16133660-16133693)
chr2 (29-62)||(23084326-23084359)
chr2 (29-62)||(24820055-24820088)
chr2 (29-62)||(25481973-25482006)
chr2 (29-62)||(25489579-25489612)
chr2 (31-62)||(24824440-24824471)
chr2 (29-62)||(42766810-42766843)
[»] chr1 (6 HSPs)
chr1 (29-62)||(21783679-21783712)
chr1 (29-62)||(21791806-21791839)
chr1 (29-62)||(26133804-26133837)
chr1 (31-62)||(44538798-44538829)
chr1 (32-62)||(13251301-13251331)
chr1 (29-62)||(22635179-22635212)
[»] scaffold0220 (1 HSPs)
scaffold0220 (29-61)||(3608-3640)
[»] scaffold0383 (1 HSPs)
scaffold0383 (29-64)||(9616-9651)
[»] scaffold0071 (1 HSPs)
scaffold0071 (32-62)||(31735-31765)
[»] scaffold1403 (1 HSPs)
scaffold1403 (29-62)||(1821-1854)
[»] scaffold0512 (1 HSPs)
scaffold0512 (29-62)||(6342-6375)
[»] scaffold0471 (1 HSPs)
scaffold0471 (29-58)||(9284-9313)
[»] scaffold0360 (1 HSPs)
scaffold0360 (29-62)||(5579-5612)
[»] scaffold0142 (1 HSPs)
scaffold0142 (29-62)||(24709-24742)
[»] scaffold0111 (1 HSPs)
scaffold0111 (29-62)||(34489-34522)
[»] scaffold0096 (1 HSPs)
scaffold0096 (29-62)||(37464-37497)
[»] scaffold0046 (1 HSPs)
scaffold0046 (29-62)||(21063-21096)
[»] scaffold0035 (1 HSPs)
scaffold0035 (29-62)||(49471-49504)
[»] scaffold0031 (1 HSPs)
scaffold0031 (31-60)||(101007-101036)
[»] scaffold0026 (1 HSPs)
scaffold0026 (29-62)||(14332-14365)
[»] scaffold0023 (1 HSPs)
scaffold0023 (29-62)||(104637-104670)
[»] scaffold0016 (1 HSPs)
scaffold0016 (29-62)||(120490-120523)
[»] scaffold0013 (1 HSPs)
scaffold0013 (29-62)||(119306-119339)
[»] scaffold0006 (1 HSPs)
scaffold0006 (29-62)||(34587-34620)


Alignment Details
Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 123 - 440
Target Start/End: Original strand, 51738141 - 51738457
Alignment:
Q  123 tctaatgttttaaaaactaacattcattgttaaacttgtgtccactatgaagatgagtcaaatgtataaagaatagaatgaaaacaaatgagacaggagt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  51738141 tctaatgttttaaaaactaacattcattgttaaacttgtgtccactatgaagatgagtcaaatgtataaagaatagaatgaaagcaaatgagacaagagt 51738240  T
Q  223 taagaatattgctttaaacaaagaatttaaattttttgatttattgagatgaagagcttccatttcttctaataacgcatttaagaatatgcttaagcaa 322  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51738241 taagaatat-gctttaaacaaagaatttaaattttttgatttattgagatgaagagcttccatttcttctaataacgcatttaagaatatgcttaagcaa 51738339  T
Q  323 aatgaagaaggtagagtgaattaaattggaactttagctaggtaactcaactgggttaagctaagtgaaaatttctcataaatgcaaaaagaaaacgttt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  51738340 aatgaagaaggtagagtgaattaaattggaactttagctagataactcaactgggttaagctaatggaaaatttctcataaatgcaaaaagaaaacgttt 51738439  T
Q  423 cttaaagggtttttagtg 440  Q
    |||||||||||| |||||    
T  51738440 cttaaagggtttctagtg 51738457  T

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Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51738020 - 51738082
Alignment:
Q  1 tagaatcttaatccaatacatcccccttaggacttgtcaattagatgaaccaataatcccaatg 64  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51738020 tagaatcctaatccaatacatcccc-ttaggacttgtcaattagatgaaccaataatcccaatg 51738082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 14494298 - 14494265
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  14494298 aggacttgtcaattagatgaaccaataatcccaa 14494265  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 14975782 - 14975749
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  14975782 aggacttgtcaattagatgaaccaataatcccaa 14975749  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 15430473 - 15430503
Alignment:
Q  32 acttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||||    
T  15430473 acttgtcaattagatgaaccaataatcccaa 15430503  T

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Target: scaffold0447 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 11621 - 11656
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaatg 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  11621 aggacttgtcaattagatgaaccaataatcccaatg 11656  T

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Target: scaffold0447; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 7007 - 7042
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaatg 64  Q
    |||||||||| |||||||||||||||||||||||||    
T  7007 aggacttgtctattagatgaaccaataatcccaatg 7042  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 23694378 - 23694413
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaatg 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  23694378 aggacttgtcaattagatgaaccaataatcccaatg 23694413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 26827109 - 26827142
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  26827109 aggacttgtcaattagatgaaccaataatcccaa 26827142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 19998002 - 19998032
Alignment:
Q  32 acttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||||    
T  19998002 acttgtcaattagatgaaccaataatcccaa 19998032  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 17621975 - 17622008
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  17621975 aggacttgtcatttagatgaaccaataatcccaa 17622008  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 18162610 - 18162643
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||| ||||    
T  18162610 aggacttgtcaattagatgaaccaataattccaa 18162643  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 21842509 - 21842476
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  21842509 aggacttgtcatttagatgaaccaataatcccaa 21842476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 33633042 - 33633075
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  33633042 aggacttgtcagttagatgaaccaataatcccaa 33633075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 38349389 - 38349356
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  38349389 aggacttgtcagttagatgaaccaataatcccaa 38349356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 4313826 - 4313861
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaatg 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  4313826 aggacttgtcaattagatgaaccaataatcccaatg 4313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 3196892 - 3196859
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  3196892 aggacttgtcaattagatgaaccaataatcccaa 3196859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 12574611 - 12574644
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  12574611 aggacttgtcaattagatgaaccaataatcccaa 12574644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 14941231 - 14941198
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  14941231 aggacttgtcaattagatgaaccaataatcccaa 14941198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 15368824 - 15368791
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  15368824 aggacttgtcaattagatgaaccaataatcccaa 15368791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 38387647 - 38387614
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  38387647 aggacttgtcaattagatgaaccaataatcccaa 38387614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Original strand, 41782395 - 41782426
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  41782395 gacttgtcaattagatgaaccaataatcccaa 41782426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Complemental strand, 48340080 - 48340049
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  48340080 gacttgtcaattagatgaaccaataatcccaa 48340049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 60
Target Start/End: Complemental strand, 48355060 - 48355029
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatccc 60  Q
    ||||||||||||||||||||||||||||||||    
T  48355060 aggacttgtcaattagatgaaccaataatccc 48355029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Complemental strand, 16330361 - 16330331
Alignment:
Q  32 acttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||||    
T  16330361 acttgtcaattagatgaaccaataatcccaa 16330331  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 5398338 - 5398371
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||| ||||||||||||||||||    
T  5398338 aggacttgtcaattaaatgaaccaataatcccaa 5398371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 9193120 - 9193153
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaatg 64  Q
    |||||||||||| |||||||||||||||||||||    
T  9193120 gacttgtcaatttgatgaaccaataatcccaatg 9193153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 13372161 - 13372194
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||| ||||||||||||||||||||||||||    
T  13372161 aggacttttcaattagatgaaccaataatcccaa 13372194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 13457288 - 13457321
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  13457288 aggacttgtcatttagatgaaccaataatcccaa 13457321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 15205547 - 15205514
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  15205547 aggacttgtcatttagatgaaccaataatcccaa 15205514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 33611751 - 33611718
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||| ||||||||||||||||||||||||    
T  33611751 aggacttgtaaattagatgaaccaataatcccaa 33611718  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 4308409 - 4308437
Alignment:
Q  29 aggacttgtcaattagatgaaccaataat 57  Q
    |||||||||||||||||||||||||||||    
T  4308409 aggacttgtcaattagatgaaccaataat 4308437  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 12797721 - 12797753
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatccca 61  Q
    ||||||||||| |||||||||||||||||||||    
T  12797721 aggacttgtcatttagatgaaccaataatccca 12797753  T

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Target: scaffold1323 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 173 - 140
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  173 aggacttgtcaattagatgaaccaataatcccaa 140  T

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Target: scaffold0292 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 1932 - 1965
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  1932 aggacttgtcaattagatgaaccaataatcccaa 1965  T

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Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 18409 - 18376
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  18409 aggacttgtcaattagatgaaccaataatcccaa 18376  T

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Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 49398 - 49431
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  49398 aggacttgtcaattagatgaaccaataatcccaa 49431  T

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Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 48995 - 49028
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  48995 aggacttgtcaattagatgaaccaataatcccaa 49028  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 80369 - 80402
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  80369 aggacttgtcaattagatgaaccaataatcccaa 80402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 53403 - 53436
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  53403 aggacttgtcagttagatgaaccaataatcccaa 53436  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 12062 - 12029
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  12062 aggacttgtcaattagatgaaccaataatcccaa 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 18254 - 18221
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  18254 aggacttgtcaattagatgaaccaataatcccaa 18221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 163517 - 163484
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  163517 aggacttgtcaattagatgaaccaataatcccaa 163484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Original strand, 163096 - 163127
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  163096 gacttgtcaattagatgaaccaataatcccaa 163127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 164332 - 164365
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  164332 aggacttgtcaattagatgaaccaataatcccaa 164365  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 424495 - 424462
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  424495 aggacttgtcaattagatgaaccaataatcccaa 424462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 182176 - 182143
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  182176 aggacttgtcagttagatgaaccaataatcccaa 182143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 12656797 - 12656764
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  12656797 aggacttgtcaattagatgaaccaataatcccaa 12656764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 18193330 - 18193297
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  18193330 aggacttgtcaattagatgaaccaataatcccaa 18193297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 18855243 - 18855276
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaatg 64  Q
    ||||||||||||||||||||||||||||||||||    
T  18855243 gacttgtcaattagatgaaccaataatcccaatg 18855276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 19410889 - 19410922
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  19410889 aggacttgtcaattagatgaaccaataatcccaa 19410922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 25401950 - 25401917
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  25401950 aggacttgtcaattagatgaaccaataatcccaa 25401917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Complemental strand, 18183874 - 18183843
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  18183874 gacttgtcaattagatgaaccaataatcccaa 18183843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 12992567 - 12992534
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  12992567 aggacttgtcagttagatgaaccaataatcccaa 12992534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 14252482 - 14252515
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  14252482 aggacttgtcatttagatgaaccaataatcccaa 14252515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 17120115 - 17120148
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  17120115 aggacttgtcagttagatgaaccaataatcccaa 17120148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 18790544 - 18790511
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||| ||||||||||||||||||    
T  18790544 aggacttgtcaattatatgaaccaataatcccaa 18790511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 18844990 - 18845019
Alignment:
Q  33 cttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||    
T  18844990 cttgtcaattagatgaaccaataatcccaa 18845019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 23602766 - 23602737
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatc 58  Q
    ||||||||||||||||||||||||||||||    
T  23602766 aggacttgtcaattagatgaaccaataatc 23602737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 35243852 - 35243819
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  35243852 aggacttgtcacttagatgaaccaataatcccaa 35243819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 23343022 - 23342989
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  23343022 aggacttgtcaattagatgaaccaataatcccaa 23342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 14482999 - 14483029
Alignment:
Q  32 acttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||||    
T  14482999 acttgtcaattagatgaaccaataatcccaa 14483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 24215366 - 24215396
Alignment:
Q  32 acttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||||    
T  24215366 acttgtcaattagatgaaccaataatcccaa 24215396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 24220986 - 24221016
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcc 59  Q
    |||||||||||||||||||||||||||||||    
T  24220986 aggacttgtcaattagatgaaccaataatcc 24221016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 3388641 - 3388674
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||| ||||||||||||||||||    
T  3388641 aggacttgtcaattaaatgaaccaataatcccaa 3388674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 20449307 - 20449274
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  20449307 aggacttgtcatttagatgaaccaataatcccaa 20449274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 20968339 - 20968367
Alignment:
Q  34 ttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||    
T  20968339 ttgtcaattagatgaaccaataatcccaa 20968367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 14652960 - 14652927
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  14652960 aggacttgtcaattagatgaaccaataatcccaa 14652927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 14690309 - 14690276
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  14690309 aggacttgtcaattagatgaaccaataatcccaa 14690276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Original strand, 3355865 - 3355896
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  3355865 gacttgtcaattagatgaaccaataatcccaa 3355896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Complemental strand, 16374154 - 16374123
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  16374154 gacttgtcaattagatgaaccaataatcccaa 16374123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Complemental strand, 45237818 - 45237787
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  45237818 gacttgtcaattagatgaaccaataatcccaa 45237787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 12845518 - 12845551
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  12845518 aggacttgtcatttagatgaaccaataatcccaa 12845551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 15346559 - 15346526
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||| |||||||||||||||||    
T  15346559 aggacttgtcaattagctgaaccaataatcccaa 15346526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 16952454 - 16952487
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||| |||||||||||||||||||||||||    
T  16952454 aggacttgccaattagatgaaccaataatcccaa 16952487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 24124725 - 24124696
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatc 58  Q
    ||||||||||||||||||||||||||||||    
T  24124725 aggacttgtcaattagatgaaccaataatc 24124696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 40560070 - 40560037
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  40560070 aggacttgtcagttagatgaaccaataatcccaa 40560037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 18287601 - 18287633
Alignment:
Q  30 ggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||| |||||||||||    
T  18287601 ggacttgtcaattagatgaactaataatcccaa 18287633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000007; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 5499258 - 5499225
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  5499258 aggacttgtcaattagatgaaccaataatcccaa 5499225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 16133693 - 16133660
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  16133693 aggacttgtcaattagatgaaccaataatcccaa 16133660  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 23084359 - 23084326
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  23084359 aggacttgtcaattagatgaaccaataatcccaa 23084326  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 24820088 - 24820055
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  24820088 aggacttgtcaattagatgaaccaataatcccaa 24820055  T

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Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 25481973 - 25482006
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  25481973 aggacttgtcaattagatgaaccaataatcccaa 25482006  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 25489579 - 25489612
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  25489579 aggacttgtcaattagatgaaccaataatcccaa 25489612  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Complemental strand, 24824471 - 24824440
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  24824471 gacttgtcaattagatgaaccaataatcccaa 24824440  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 42766843 - 42766810
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    |||||| |||||||||||||||||||||||||||    
T  42766843 aggactagtcaattagatgaaccaataatcccaa 42766810  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 21783712 - 21783679
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  21783712 aggacttgtcaattagatgaaccaataatcccaa 21783679  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 21791839 - 21791806
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  21791839 aggacttgtcaattagatgaaccaataatcccaa 21791806  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 26133837 - 26133804
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||||    
T  26133837 aggacttgtcaattagatgaaccaataatcccaa 26133804  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 62
Target Start/End: Original strand, 44538798 - 44538829
Alignment:
Q  31 gacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||||||||||    
T  44538798 gacttgtcaattagatgaaccaataatcccaa 44538829  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 13251301 - 13251331
Alignment:
Q  32 acttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||||    
T  13251301 acttgtcaattagatgaaccaataatcccaa 13251331  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 22635212 - 22635179
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||| ||||||||||||||||||||||||||    
T  22635212 aggacttctcaattagatgaaccaataatcccaa 22635179  T

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Target: scaffold0220 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 3640 - 3608
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatccca 61  Q
    |||||||||||||||||||||||||||||||||    
T  3640 aggacttgtcaattagatgaaccaataatccca 3608  T

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Target: scaffold0383 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 9616 - 9651
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaatg 64  Q
    |||||||||| |||||||||||||||||||||||||    
T  9616 aggacttgtctattagatgaaccaataatcccaatg 9651  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Complemental strand, 31765 - 31735
Alignment:
Q  32 acttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||||||||||||||||||||||||||    
T  31765 acttgtcaattagatgaaccaataatcccaa 31735  T

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Target: scaffold1403 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 1854 - 1821
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  1854 aggacttgtcatttagatgaaccaataatcccaa 1821  T

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Target: scaffold0512 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 6342 - 6375
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  6342 aggacttgtcagttagatgaaccaataatcccaa 6375  T

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Target: scaffold0471 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 9313 - 9284
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatc 58  Q
    ||||||||||||||||||||||||||||||    
T  9313 aggacttgtcaattagatgaaccaataatc 9284  T

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Target: scaffold0360 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 5612 - 5579
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||||||||||||| ||||||||    
T  5612 aggacttgtcaattagatgaaccaacaatcccaa 5579  T

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Target: scaffold0142 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 24742 - 24709
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  24742 aggacttgtcagttagatgaaccaataatcccaa 24709  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 34522 - 34489
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  34522 aggacttgtcatttagatgaaccaataatcccaa 34489  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 37497 - 37464
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    |||||||| |||||||||||||||||||||||||    
T  37497 aggacttgccaattagatgaaccaataatcccaa 37464  T

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Target: scaffold0046 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 21063 - 21096
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  21063 aggacttgtcagttagatgaaccaataatcccaa 21096  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 49504 - 49471
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  49504 aggacttgtcatttagatgaaccaataatcccaa 49471  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 101007 - 101036
Alignment:
Q  31 gacttgtcaattagatgaaccaataatccc 60  Q
    ||||||||||||||||||||||||||||||    
T  101007 gacttgtcaattagatgaaccaataatccc 101036  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 14332 - 14365
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  14332 aggacttgtcatttagatgaaccaataatcccaa 14365  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 104670 - 104637
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  104670 aggacttgtcatttagatgaaccaataatcccaa 104637  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 120523 - 120490
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||||||| ||||||||||||||||||    
T  120523 aggacttgtcaattaaatgaaccaataatcccaa 120490  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 119339 - 119306
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    ||||||||||| ||||||||||||||||||||||    
T  119339 aggacttgtcatttagatgaaccaataatcccaa 119306  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 34587 - 34620
Alignment:
Q  29 aggacttgtcaattagatgaaccaataatcccaa 62  Q
    |||| |||||||||||||||||||||||||||||    
T  34587 aggaattgtcaattagatgaaccaataatcccaa 34620  T

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