View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2182_low_6 (Length: 315)

Name: NF2182_low_6
Description: NF2182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2182_low_6
NF2182_low_6
[»] chr7 (38 HSPs)
chr7 (20-188)||(22059857-22060040)
chr7 (190-311)||(18207180-18207300)
chr7 (213-311)||(35137556-35137654)
chr7 (190-311)||(4999493-4999614)
chr7 (190-311)||(32564405-32564526)
chr7 (213-269)||(46033822-46033878)
chr7 (190-293)||(3434562-3434665)
chr7 (216-311)||(35522902-35522997)
chr7 (190-293)||(36361910-36362013)
chr7 (213-311)||(3694390-3694488)
chr7 (193-311)||(3783998-3784116)
chr7 (195-312)||(2318221-2318338)
chr7 (190-311)||(8080362-8080483)
chr7 (190-311)||(19329842-19329963)
chr7 (190-311)||(38267040-38267161)
chr7 (190-311)||(38837217-38837338)
chr7 (190-311)||(39255903-39256023)
chr7 (190-311)||(40957707-40957828)
chr7 (190-293)||(7389389-7389492)
chr7 (220-311)||(16374803-16374894)
chr7 (190-293)||(36362026-36362129)
chr7 (213-284)||(46374808-46374879)
chr7 (213-311)||(8238236-8238334)
chr7 (213-311)||(22343384-22343482)
chr7 (213-311)||(41915764-41915862)
chr7 (191-311)||(32951472-32951592)
chr7 (190-293)||(19436184-19436287)
chr7 (213-311)||(40846092-40846190)
chr7 (213-255)||(38044220-38044262)
chr7 (190-260)||(42972975-42973044)
chr7 (216-260)||(38160513-38160556)
chr7 (190-256)||(10343597-10343663)
chr7 (213-311)||(21234424-21234522)
chr7 (213-311)||(36208196-36208294)
chr7 (221-311)||(41423713-41423803)
chr7 (196-280)||(26898316-26898399)
chr7 (216-260)||(32029751-32029794)
chr7 (216-260)||(43317566-43317609)
[»] chr4 (38 HSPs)
chr4 (190-312)||(29977885-29978007)
chr4 (190-311)||(50052407-50052528)
chr4 (190-311)||(6034044-6034165)
chr4 (190-311)||(50813871-50813992)
chr4 (213-311)||(50526150-50526248)
chr4 (190-311)||(29239886-29240007)
chr4 (190-311)||(48183028-48183149)
chr4 (220-311)||(23608265-23608356)
chr4 (213-311)||(17983722-17983820)
chr4 (222-300)||(18769037-18769115)
chr4 (213-311)||(28480247-28480345)
chr4 (213-311)||(28481122-28481220)
chr4 (213-311)||(28481997-28482095)
chr4 (213-311)||(29547938-29548036)
chr4 (189-311)||(41236346-41236468)
chr4 (190-311)||(480426-480547)
chr4 (190-311)||(11511441-11511562)
chr4 (190-311)||(42044346-42044467)
chr4 (238-311)||(56300144-56300217)
chr4 (213-311)||(3481677-3481775)
chr4 (213-311)||(19670695-19670793)
chr4 (222-311)||(18769141-18769230)
chr4 (234-311)||(47104588-47104665)
chr4 (190-311)||(54473512-54473633)
chr4 (219-311)||(29589719-29589811)
chr4 (231-311)||(41823923-41824003)
chr4 (220-311)||(48647705-48647796)
chr4 (190-260)||(32766958-32767028)
chr4 (213-311)||(40574802-40574900)
chr4 (190-311)||(24995086-24995207)
chr4 (190-311)||(29234224-29234345)
chr4 (213-311)||(55079692-55079791)
chr4 (213-260)||(55475214-55475261)
chr4 (213-311)||(18924474-18924572)
chr4 (213-311)||(31910215-31910313)
chr4 (213-311)||(44536725-44536822)
chr4 (213-311)||(47986231-47986329)
chr4 (190-311)||(29535377-29535497)
[»] chr3 (37 HSPs)
chr3 (193-312)||(25407125-25407245)
chr3 (213-312)||(26141510-26141609)
chr3 (190-311)||(49607414-49607535)
chr3 (190-311)||(53982011-53982132)
chr3 (213-312)||(13898033-13898132)
chr3 (189-311)||(8076392-8076514)
chr3 (213-311)||(17470428-17470526)
chr3 (190-311)||(14623818-14623939)
chr3 (190-311)||(33644200-33644321)
chr3 (213-311)||(26754718-26754816)
chr3 (190-311)||(1758435-1758558)
chr3 (191-311)||(31456690-31456810)
chr3 (213-312)||(33118828-33118928)
chr3 (190-264)||(11095379-11095453)
chr3 (213-311)||(20764894-20764992)
chr3 (213-311)||(36331308-36331406)
chr3 (213-311)||(52629323-52629421)
chr3 (190-311)||(54868874-54868995)
chr3 (220-311)||(51419339-51419430)
chr3 (217-311)||(47531892-47531986)
chr3 (213-311)||(48375685-48375783)
chr3 (190-311)||(24699933-24700054)
chr3 (213-293)||(27714888-27714968)
chr3 (213-293)||(48587088-48587168)
chr3 (216-311)||(25395312-25395407)
chr3 (213-311)||(11347901-11347999)
chr3 (213-307)||(11907394-11907488)
chr3 (213-307)||(41189747-41189841)
chr3 (190-311)||(35536626-35536747)
chr3 (219-311)||(41080737-41080828)
chr3 (221-311)||(30801712-30801802)
chr3 (190-311)||(8956762-8956883)
chr3 (213-258)||(36707456-36707501)
chr3 (228-280)||(25413784-25413836)
chr3 (263-307)||(32605897-32605941)
chr3 (216-280)||(47190960-47191023)
chr3 (216-260)||(53581792-53581835)
[»] chr5 (28 HSPs)
chr5 (190-312)||(6259979-6260101)
chr5 (206-311)||(39557496-39557601)
chr5 (213-311)||(28177798-28177896)
chr5 (213-311)||(6679721-6679819)
chr5 (193-311)||(18520863-18520981)
chr5 (190-311)||(2740274-2740395)
chr5 (190-311)||(14831814-14831935)
chr5 (190-311)||(40145407-40145528)
chr5 (213-311)||(26720539-26720637)
chr5 (213-311)||(26990288-26990386)
chr5 (190-311)||(33149617-33149738)
chr5 (213-311)||(2252147-2252245)
chr5 (213-311)||(3921244-3921342)
chr5 (213-311)||(35943871-35943969)
chr5 (190-311)||(33825303-33825424)
chr5 (190-311)||(35785199-35785320)
chr5 (190-311)||(36732921-36733042)
chr5 (213-312)||(16327924-16328023)
chr5 (213-311)||(13811675-13811773)
chr5 (213-311)||(42414281-42414379)
chr5 (190-307)||(38296203-38296320)
chr5 (190-311)||(9603813-9603934)
chr5 (234-311)||(31009032-31009109)
chr5 (216-311)||(39688876-39688971)
chr5 (213-311)||(15409589-15409687)
chr5 (191-249)||(36875644-36875702)
chr5 (234-307)||(21370048-21370121)
chr5 (216-280)||(33801572-33801635)
[»] chr2 (38 HSPs)
chr2 (190-311)||(17819983-17820104)
chr2 (193-311)||(28863458-28863576)
chr2 (190-311)||(7465714-7465835)
chr2 (190-311)||(17473020-17473141)
chr2 (190-293)||(5574485-5574588)
chr2 (190-311)||(9058480-9058601)
chr2 (190-311)||(33436079-33436200)
chr2 (213-293)||(40613899-40613979)
chr2 (213-311)||(2997466-2997564)
chr2 (193-311)||(19930799-19930917)
chr2 (190-311)||(13438343-13438464)
chr2 (190-311)||(38273121-38273242)
chr2 (240-312)||(3154193-3154265)
chr2 (216-311)||(15428719-15428814)
chr2 (213-311)||(43490144-43490242)
chr2 (190-311)||(10249361-10249482)
chr2 (190-311)||(20700815-20700936)
chr2 (190-311)||(28381634-28381755)
chr2 (190-311)||(32505627-32505748)
chr2 (190-311)||(40701478-40701599)
chr2 (216-311)||(2533150-2533244)
chr2 (213-264)||(26891530-26891581)
chr2 (220-311)||(38732384-38732475)
chr2 (213-307)||(42257216-42257310)
chr2 (195-311)||(44151928-44152048)
chr2 (213-311)||(45097714-45097812)
chr2 (190-311)||(30915463-30915584)
chr2 (190-258)||(17823784-17823852)
chr2 (213-311)||(3440002-3440100)
chr2 (217-311)||(13365380-13365474)
chr2 (190-258)||(27864704-27864772)
chr2 (191-310)||(41575138-41575258)
chr2 (220-311)||(36168866-36168957)
chr2 (190-288)||(4060685-4060783)
chr2 (190-264)||(38882840-38882913)
chr2 (190-259)||(33436211-33436280)
chr2 (216-260)||(16096871-16096914)
chr2 (216-260)||(42849793-42849836)
[»] chr8 (31 HSPs)
chr8 (191-311)||(5957831-5957951)
chr8 (213-311)||(37038502-37038600)
chr8 (190-311)||(15197333-15197454)
chr8 (213-311)||(34307239-34307337)
chr8 (217-311)||(43414560-43414654)
chr8 (190-311)||(12831047-12831168)
chr8 (190-311)||(34012275-34012396)
chr8 (188-311)||(1179919-1180042)
chr8 (213-311)||(10621066-10621164)
chr8 (213-311)||(14547945-14548043)
chr8 (213-311)||(16383400-16383498)
chr8 (190-311)||(17443825-17443946)
chr8 (213-309)||(8841413-8841509)
chr8 (213-311)||(40423922-40424020)
chr8 (190-311)||(504100-504221)
chr8 (190-311)||(4854842-4854963)
chr8 (190-311)||(42221515-42221636)
chr8 (213-311)||(15048160-15048258)
chr8 (213-311)||(24307772-24307870)
chr8 (190-264)||(44507113-44507187)
chr8 (234-311)||(9122229-9122306)
chr8 (190-311)||(23122576-23122697)
chr8 (220-311)||(16056380-16056471)
chr8 (190-280)||(2547099-2547188)
chr8 (190-264)||(38229429-38229502)
chr8 (220-311)||(10284610-10284701)
chr8 (217-311)||(15258908-15259002)
chr8 (190-260)||(20074964-20075034)
chr8 (195-280)||(2165876-2165960)
chr8 (213-253)||(24307652-24307692)
chr8 (216-260)||(29705485-29705528)
[»] chr6 (20 HSPs)
chr6 (213-311)||(31976271-31976369)
chr6 (213-311)||(11427641-11427739)
chr6 (213-311)||(31953009-31953107)
chr6 (213-311)||(32869701-32869799)
chr6 (213-311)||(4231571-4231669)
chr6 (213-311)||(15508003-15508101)
chr6 (213-311)||(15990021-15990119)
chr6 (193-311)||(22880637-22880755)
chr6 (213-311)||(30341339-30341437)
chr6 (190-311)||(17598554-17598675)
chr6 (221-311)||(23128106-23128196)
chr6 (190-311)||(12732482-12732603)
chr6 (213-311)||(28536467-28536563)
chr6 (217-311)||(29857854-29857948)
chr6 (220-311)||(9379691-9379782)
chr6 (213-264)||(31109426-31109477)
chr6 (190-311)||(6209444-6209565)
chr6 (233-311)||(30870057-30870135)
chr6 (216-260)||(7367672-7367715)
chr6 (216-260)||(26669943-26669986)
[»] chr1 (32 HSPs)
chr1 (213-311)||(32813270-32813368)
chr1 (190-311)||(9474855-9474976)
chr1 (213-311)||(51898662-51898760)
chr1 (190-311)||(38632300-38632421)
chr1 (213-311)||(37649221-37649319)
chr1 (217-311)||(41758832-41758926)
chr1 (190-311)||(2581915-2582036)
chr1 (190-311)||(47452299-47452420)
chr1 (216-311)||(44454005-44454100)
chr1 (189-311)||(3000318-3000440)
chr1 (213-311)||(50590979-50591077)
chr1 (220-293)||(26440764-26440837)
chr1 (190-311)||(27564714-27564835)
chr1 (216-311)||(5958979-5959074)
chr1 (213-311)||(38595177-38595275)
chr1 (190-311)||(48716261-48716382)
chr1 (190-280)||(750213-750302)
chr1 (213-311)||(37926417-37926515)
chr1 (213-311)||(41608472-41608570)
chr1 (213-311)||(44548355-44548453)
chr1 (213-311)||(50630481-50630579)
chr1 (190-311)||(43132-43253)
chr1 (213-293)||(8346385-8346465)
chr1 (213-311)||(6260893-6260991)
chr1 (213-311)||(45044539-45044637)
chr1 (234-311)||(3302512-3302589)
chr1 (220-293)||(13414791-13414864)
chr1 (190-260)||(4401451-4401520)
chr1 (213-263)||(11152405-11152455)
chr1 (213-311)||(47748466-47748563)
chr1 (216-260)||(7447948-7447991)
chr1 (216-260)||(50448194-50448237)
[»] scaffold1268 (1 HSPs)
scaffold1268 (213-311)||(908-1006)
[»] scaffold1267 (1 HSPs)
scaffold1267 (213-311)||(908-1006)
[»] scaffold0018 (1 HSPs)
scaffold0018 (215-311)||(152523-152619)
[»] scaffold0237 (1 HSPs)
scaffold0237 (217-311)||(4056-4150)
[»] scaffold0316 (1 HSPs)
scaffold0316 (211-293)||(17075-17157)
[»] scaffold0321 (1 HSPs)
scaffold0321 (213-311)||(10088-10186)
[»] scaffold0119 (1 HSPs)
scaffold0119 (216-260)||(808-851)


Alignment Details
Target: chr7 (Bit Score: 104; Significance: 8e-52; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 22059857 - 22060040
Alignment:
Q  20 ctgagtactcctttaaaatcatgcaatttggttttagatgactgagcgaagaa----------------ttatatgactttctttcatcaatgaaaaata 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||                ||||||  |||||||||||||||||||||||    
T  22059857 ctgagtactcctttaaaatcatgcaatttggttttagatgactgagccaagaaactggaagttagggaattatatagctttctttcatcaatgaaaaata 22059956  T
Q  104 atatatgaataatagatgatctctattagttaattaattctttactgctgcagctttctaattcctctactaacatgagtctacc 188  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  22059957 atatatgaataata-atgatctctattagttaattaattctttactgctacaactttctaattcctctactaacatgagtctacc 22060040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 18207180 - 18207300
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  |||| | |||||||||||||||| ||| ||||||| |||||||||| |||||||| ||| |||| ||||||||| ||||||||     
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttc 18207278  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| |||||||||||||||||    
T  18207279 tctttcatctcctcttctctct 18207300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 35137556 - 35137654
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || |||||||||||||||||| |||||| ||||| || | ||| |||||||||||||| ||||   |||||||||||||||    
T  35137556 taggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctct 35137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 4999614 - 4999493
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||| ||||||||||||  || |||||||||||||||||||| |||| ||||| || | ||| ||||||||||||||     
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||  ||||||||||||||||    
T  4999514 tcttttatctcctcttctctct 4999493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 32564526 - 32564405
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  ||| || |||||||||||||||||||| |||||||||||||||||||||| ||||  | ||| | ||| |||||| |||||||     
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| | ||| |||||||||||    
T  32564426 tctttcttcttctcttctctct 32564405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 46033878 - 46033822
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaa 269  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  46033878 taggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaa 46033822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 3434562 - 3434665
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||| ||||||||| ||||| || ||||| ||||| ||||||||     
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  290 tctt 293  Q
    ||||    
T  3434662 tctt 3434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 35522902 - 35522997
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||  |||||||||||||||||||||||||||||| || ||| ||||| ||||| |||||||| ||||   |||| ||||||||||    
T  35522902 gtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttttctctcttcttctctct 35522997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 36362013 - 36361910
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||||||||||| || || ||||||||||||||||||||||||| ||||| || | ||||||||| ||||||||     
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  290 tctt 293  Q
    ||||    
T  36361913 tctt 36361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 3694390 - 3694488
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| |||||||||  |||||||||||||||||||||||||||| ||||  || ||||| ||||| |||||||| ||||   |||||||||||||||    
T  3694390 taggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttttctctcctcttctctct 3694488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 3783998 - 3784116
Alignment:
Q  193 taatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttct 292  Q
    |||||||||||  |||  | |||||||||||||| |  || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| |||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  293 tgcatctcctcttctctct 311  Q
    |   |||||||||||||||    
T  3784098 tttctctcctcttctctct 3784116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 2318338 - 2318221
Alignment:
Q  195 atgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttg 294  Q
    |||||||||  |||| |||||||||||| ||||| ||| |||||||||||||||||||||  |||||||| || | || ||| || || ||||| ||||     
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T
Q  295 catctcctcttctctctc 312  Q
    |||||| |||||||||||    
T  2318238 catctcatcttctctctc 2318221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 8080483 - 8080362
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||| ||| ||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  8080383 tcttttctctcctcttctctct 8080362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 19329842 - 19329963
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || |||||||||||||||||||||||||  |||| || | ||| ||||| ||||||||     
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  19329942 tcttttctctcctcttctctct 19329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 38267040 - 38267161
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | || ||| |||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  38267140 tcttttctctcctcttctctct 38267161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 38837217 - 38837338
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| |  ||||| ||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  38837317 tcttttctctcctcttctctct 38837338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 39256023 - 39255903
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  |||| | |||||||||||||||| ||| | ||||| ||||||||||||||||||| ||| || |  ||||||||  |||||||     
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacactttc 39255925  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| |||||||||||||||||    
T  39255924 tctttcatctcctcttctctct 39255903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 40957707 - 40957828
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  ||| || ||||||||||||||| | || | ||||||||||||||||||||||| ||||| || |||||  |||| ||||||||     
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||| ||||||||||    
T  40957807 tcttttctctcatcttctctct 40957828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 7389389 - 7389492
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||| | || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  290 tctt 293  Q
    ||||    
T  7389489 tctt 7389492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 16374894 - 16374803
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||| ||| ||||||||||||||||||||||||||| || ||| ||||||| ||||| || |||| |||||| | ||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctttttctctct 16374803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 36362026 - 36362129
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||| |||||| || || ||||||||||||||||||||||||| ||||| || | ||||||||| ||||||||     
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  290 tctt 293  Q
    ||||    
T  36362126 tctt 36362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 46374879 - 46374808
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacaca 284  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| |||||| | ||| ||||| ||||    
T  46374879 taggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 8238236 - 8238334
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || |||||||||||||||||||||| || |||| ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttcttcttctcttctctct 8238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 22343384 - 22343482
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||  || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  22343384 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 22343482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 41915764 - 41915862
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| ||||| |||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  41915764 taggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 41915862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 32951592 - 32951472
Alignment:
Q  191 agtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacacttttt 290  Q
    |||||||||||||  ||| || ||| || ||||||| || |||||| |||||||||||||| |||||| ||||| || | ||| ||||| |||||||| |    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  291 cttgcatctcctcttctctct 311  Q
    |||   |||||||||||||||    
T  32951492 cttttctctcctcttctctct 32951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 19436287 - 19436184
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| |||||||||  || ||||||||||||||||||||||||| ||||| || ||||| || || ||||||||     
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  290 tctt 293  Q
    ||||    
T  19436187 tctt 19436184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 40846190 - 40846092
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| ||| |||||||||||||| ||| || || | ||| | ||| |||||| ||||||| |||| | ||| |||||||||||    
T  40846190 taggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttctctttcttcttctcttctctct 40846092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 38044220 - 38044262
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgaca 255  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  38044220 taggtggcaatacaccccttgacatccacacaaaaatctgaca 38044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 42973044 - 42972975
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    ||||||||||||||| || ||| || |||||||||||||  ||| ||||||||||||| ||||||||||||    
T  42973044 gagtaatgatacatgtactatcctatgtggcaatacaccattta-cacccacacaaaattctgacacgtgg 42972975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 38160513 - 38160556
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  38160513 gtggcaatacacccctta-cacccacacaaaattctgacacgtgg 38160556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 10343663 - 10343597
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacac 256  Q
    ||||||||||||||  |||  | ||||||| |||||||  ||| |||||||||||||||||||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 21234424 - 21234522
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| |||||||||| || |||| ||||||||||| |||||||| | |||||| | ||| ||||| |||| ||| |||| | |||||| | ||||||    
T  21234424 taggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttctcttacctctcctttcctctct 21234522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 36208196 - 36208294
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||||  | || ||||||||||||||| |||||| |||||||| || | ||  ||||| |||| ||| |||| | |||||||||||||||    
T  36208196 taggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctct 36208294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 41423713 - 41423803
Alignment:
Q  221 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||| ||| ||||  |||||||||||||||| |||||||| |  |||||  |||| || | ||| |||| |||||||||||||||||    
T  41423713 aatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttctctttcatctcctcttctctct 41423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 26898316 - 26898399
Alignment:
Q  196 tgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 280  Q
    ||||||||| || ||| || |||||||||||||  ||| |||||||| |||| ||||||||||||| || || | ||||||||||    
T  26898316 tgatacatgtaccatcctatgtggcaatacacctttta-cacccacataaaattctgacacgtggtaacctggaccccacacaaa 26898399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 32029751 - 32029794
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  32029751 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 32029794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 43317609 - 43317566
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||    
T  43317609 gtggcaatacacccctta-cacccacacaaaattctgacatgtgg 43317566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 29977885 - 29978007
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||||| ||||||||     
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttc 29977984  T
Q  290 tcttgcatctcctcttctctctc 312  Q
    |||| ||||| ||||| ||||||    
T  29977985 tctttcatcttctcttttctctc 29978007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 50052528 - 50052407
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| | |||||||||||||||    
T  50052428 tctttcctctcctcttctctct 50052407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 6034044 - 6034165
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || |||||||||||||||||||||| || ||||| || ||||| ||||| ||||||||     
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  6034144 tcttttctctcctcttctctct 6034165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 50813992 - 50813871
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  ||| || ||||||| |||||||||||| |||||||||||||||||||||| ||||||| ||||| ||| |||||  |||||||     
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| | ||| |||||||||||    
T  50813892 tctttcttcttctcttctctct 50813871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 50526248 - 50526150
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||| || || || ||||| ||| |||| | || | |||||||||||||||    
T  50526248 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttctatttcctctcctcttctctct 50526150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 29239886 - 29240007
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || ||| |||||||||||||| |||||| ||||| || | ||||||||| ||||||||     
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| | |||||||||||||||    
T  29239986 tctttcctctcctcttctctct 29240007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 48183149 - 48183028
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | || |||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  48183049 tcttttctctcctcttctctct 48183028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 23608265 - 23608356
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||  || ||||||||||||||||||||||||| ||||| ||||  |||||||| |||||||| ||||  ||||||||||||||||    
T  23608265 caatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttctcttttatctcctcttctctct 23608356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 17983820 - 17983722
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  17983820 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 17983722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 18769115 - 18769037
Alignment:
Q  222 atacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctc 300  Q
    ||||||||| |||||||||||||||||||||||| |||||||  | ||||||||||||||||| ||| |||| ||||||    
T  18769115 atacaccccctaacacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctc 18769037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 28480345 - 28480247
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||||||||||| || | |||||||||||||||||    
T  28480345 taggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctct 28480247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 28481220 - 28481122
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||||||||||| || | |||||||||||||||||    
T  28481220 taggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctct 28481122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 28482095 - 28481997
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||||||||||| || | |||||||||||||||||    
T  28482095 taggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctct 28481997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 29548036 - 29547938
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||| || ||| ||||| || ||  |||||||||||| | ||| |||||||||||    
T  29548036 taggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttttctttcttcttctcttctctct 29547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 41236346 - 41236468
Alignment:
Q  189 cgagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacacttt 288  Q
    |||||||||||||||  |||  | ||||||||||||||||  || ||| ||||||||||||||||||||| ||||| || | ||| ||||| ||||||||    
T  41236346 cgagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 41236445  T
Q  289 ttcttgcatctcctcttctctct 311  Q
     ||||   |||||||||||||||    
T  41236446 ctcttttctctcctcttctctct 41236468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 480547 - 480426
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| |||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| ||||||||     
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  480447 tcttttctctcctcttctctct 480426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 11511562 - 11511441
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||| ||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   ||| |||||||||||    
T  11511462 tcttttctcttctcttctctct 11511441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 42044467 - 42044346
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||||||||||| || |  ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  42044367 tcttttctctcctcttctctct 42044346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 56300217 - 56300144
Alignment:
Q  238 ccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||||||||| |||| | |||||||||||||||    
T  56300217 ccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctcttctctct 56300144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 3481677 - 3481775
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||| | || ||||||||||||||||||||||| | ||||| || | ||||||||| |||||||| |||| | || | ||||||||||    
T  3481677 taggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttctctttcctcccatcttctctct 3481775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 19670793 - 19670695
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  19670793 taggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 19670695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 18769141 - 18769230
Alignment:
Q  222 atacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||  ||||||||||||||||||||||||||||||||  | || |||||||||| ||| ||| |||| |||||||| || |||||    
T  18769141 atacaccctctaacacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctttcatctccttttttctct 18769230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 47104588 - 47104665
Alignment:
Q  234 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||| |||||||||||   ||  | |||||||||||||||||| |||| |||||||||||||||||    
T  47104588 acacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttctctttcatctcctcttctctct 47104665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 54473633 - 54473512
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| |||||||||  || |||||||||||||||||| |||||| ||||| || | ||| ||||| ||||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  54473533 tcttttctctcctcttctctct 54473512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 29589811 - 29589719
Alignment:
Q  219 gcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| |||||||||||||||||||| | |||| || ||| | |||||||||  ||||||| |||| | ||| |||||||||||    
T  29589811 gcaatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttcttcttctcttctctct 29589719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 41823923 - 41824003
Alignment:
Q  231 ttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||||||||||| |||||||| | ||| ||||| |||||||| ||||   |||| ||||||||||    
T  41823923 ttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctctct 41824003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 48647796 - 48647705
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||| || |  || ||||| |||| ||| |||| | |||||||||||||||    
T  48647796 caatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctctttcctctcctcttctctct 48647705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 32766958 - 32767028
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||| |||||||||  ||| || |||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtgg 32767028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 40574802 - 40574900
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||  |  ||||| |||||  |||| |||||||| ||||   |||||||||||||||    
T  40574802 taggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttctcttttctctcctcttctctct 40574900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 24995207 - 24995086
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||| ||| |||  | ||| ||||||||||||| || ||||||||| |||||| |||||||| ||||| || | ||| ||||| |||| |||     
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  24995107 tcttttctctcctcttctctct 24995086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 29234345 - 29234224
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||| ||||||||||||| || | |||  |||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  29234245 tcttttctctcctcttctctct 29234224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 55079791 - 55079692
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacat-gaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||| ||| ||||||| |||||||||||||| |||| || || ||  |||||||||  ||||||| |||| | ||| |||||||||||    
T  55079791 taggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacactttctctttcttcttctcttctctct 55079692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 55475214 - 55475261
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||    
T  55475214 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtgg 55475261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 18924572 - 18924474
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| | | |||||||||||||||||| ||||  | |||||  || |||||  ||||||| |||| | ||| |||||||||||    
T  18924572 taggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactttctctttcttcttctcttctctct 18924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 31910215 - 31910313
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| |||||||| | || ||||||||||||||||||||||| | | |||||| | ||| ||||| |||||||| ||||   |||| ||||||||||    
T  31910215 taggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttctcttttctctcatcttctctct 31910313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 44536822 - 44536725
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||| |||||||||||||||||| ||||||| ||  | |||||| ||  ||||||| |||| | ||| |||||||||||    
T  44536822 taggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttctctttcttcttctcttctctct 44536725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 47986231 - 47986329
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| ||||| ||| |||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | | | |||||||||||    
T  47986231 taggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttattctcttctctct 47986329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 29535377 - 29535497
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  |||||| |||||| ||||||| | |||   | |||||||||||| || ||| ||| ||| || ||||||||||||||||||||     
T  29535377 gagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacactttc 29535475  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| |||||| | ||||||||    
T  29535476 tctttcatctcttattctctct 29535497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 25407245 - 25407125
Alignment:
Q  193 taatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaa-tctgacacgtggtcacatgaatcccacacaaacacactttttc 291  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||| |||||||||| ||||||||||| ||| ||| |||||||||||||||||||| ||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctc 25407146  T
Q  292 ttgcatctcctcttctctctc 312  Q
    || ||||||||||||||||||    
T  25407145 tttcatctcctcttctctctc 25407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 26141609 - 26141510
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||   ||||||||||| ||||    
T  26141609 taggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttctcttttctctcctcttctttctc 26141510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 49607414 - 49607535
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||     
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   ||||||||| |||||    
T  49607514 tcttttctctcctcttttctct 49607535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 53982011 - 53982132
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  53982111 tcttttctctcctcttctctct 53982132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 13898132 - 13898033
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 312  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||  || | | ||||||| |||||||| |||| ||||| ||||||||||||    
T  13898132 taggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctc 13898033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 8076392 - 8076514
Alignment:
Q  189 cgagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacacttt 288  Q
    |||||||||||||||  |||  | ||||||||| ||||||| || |||||||||||||||||| |||||| ||||| || | ||| ||||| ||||||||    
T  8076392 cgagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 8076491  T
Q  289 ttcttgcatctcctcttctctct 311  Q
     |||| | |||||||||||||||    
T  8076492 ctctttcctctcctcttctctct 8076514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 17470428 - 17470526
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||| || | ||||||||| |||||||| ||||   |||| ||||||||||    
T  17470428 taggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttctctcatcttctctct 17470526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 14623939 - 14623818
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||||||||||||||||| ||||||||| |||||||||||| ||| |||  || | | ||||||| ||||||||     
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| ||||| |||||||||||    
T  14623839 tctttcatcttctcttctctct 14623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 33644200 - 33644321
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | | ||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  33644300 tcttttctctcctcttctctct 33644321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 26754718 - 26754816
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| |  ||| |||||||||||||||||| ||||||||||| | ||| ||||| |||| ||| |||| | |||||||||||||||    
T  26754718 taggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctct 26754816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 1758558 - 1758435
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacacccc--ttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactt 287  Q
    |||| |||||||||   ||| ||||||| ||||||||||||  || ||||||||||||||||||||||  |||| || || |  ||||||||||||| ||    
T  1758558 gagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattt 1758459  T
Q  288 tttcttgcatctcctcttctctct 311  Q
    | |||| |||||||||||||||||    
T  1758458 tctctttcatctcctcttctctct 1758435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 31456690 - 31456810
Alignment:
Q  191 agtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacacttttt 290  Q
    |||||||||||||  |||  |||||| |||||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| |||||||| |    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  291 cttgcatctcctcttctctct 311  Q
    |||   ||||||||| |||||    
T  31456790 cttttctctcctcttttctct 31456810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 33118928 - 33118828
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcct-cttctctct 311  Q
    |||||| |||||||||| || |||||||||||||||| |||||||| ||||| || ||||| || ||||||||||| |||| | |||||| |||||||||    
T  33118928 taggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctctttcctctcctccttctctct 33118829  T
Q  312 c 312  Q
    |    
T  33118828 c 33118828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 11095453 - 11095379
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 264  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcac 11095379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 20764992 - 20764894
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||| |||||| | |||  |||| |||||||| ||||   |||| ||||||||||    
T  20764992 taggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttttctctcatcttctctct 20764894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 36331406 - 36331308
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  36331406 taggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 36331308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 52629323 - 52629421
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| |||||||| ||||   |||| ||||||||||    
T  52629323 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctct 52629421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 54868995 - 54868874
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || ||||||||||||||||||||||||| || || || | ||| ||||| ||||||||     
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||| ||||||||||    
T  54868895 tcttttctctcatcttctctct 54868874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 51419430 - 51419339
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||  | ||| ||||| |||||||| ||||   |||||| ||||||||    
T  51419430 caatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctcttttctctcctattctctct 51419339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 47531892 - 47531986
Alignment:
Q  217 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||  |||||| |||||||| |||||||||||||| || ||||| ||| ||||| |||||||| ||||   |||||| ||||||||    
T  47531892 tggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctcttttctctcctattctctct 47531986  T

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Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 48375783 - 48375685
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| |||||||||||| || | ||| |||||||||||||  ||||||||||| | ||| ||||| |||| ||| |||| | |||||||||||||||    
T  48375783 taggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctct 48375685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 24700054 - 24699933
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||| ||||||||||||  || ||||||||| ||||||||| ||||||| ||| || | ||   |||||||||||||     
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| | |||||||||||||||    
T  24699954 tctttcctctcctcttctctct 24699933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 27714968 - 27714888
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 293  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||    
T  27714968 taggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 48587168 - 48587088
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 293  Q
    ||||||||||||||||| || ||||| ||| ||||||||||||||| ||||| || ||||| |||||  ||||||| ||||    
T  48587168 taggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 25395407 - 25395312
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||| ||||| ||||||| |||||||||||||||||||| ||||  | ||  | |||||||||||||| ||| |||| ||||| ||||| |||||    
T  25395407 gtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctctttcatcttctcttttctct 25395312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 11347999 - 11347901
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| ||||||| || || ||| ||||||||||||||||||||||| |||||| | ||  || || |||||||| ||||   |||||||||||||||    
T  11347999 taggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttctcttttctctcctcttctctct 11347901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 11907394 - 11907488
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttct 307  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||| ||||||| ||| | ||| ||||| |||| ||| ||||   |||||||||||    
T  11907394 taggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttctcttttctctcctcttct 11907488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 41189841 - 41189747
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttct 307  Q
    |||||||||||||| |  || ||||||||| |||||| |||||||||| |||||| | ||| ||||| |||||||| ||||   |||||||||||    
T  41189841 taggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttct 41189747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 35536626 - 35536747
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | || |||||||||||||  || ||||||||| |||||| |||||||||||||  || | |  |||||| |||||||      
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcc 35536725  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| ||||| |||||||||||    
T  35536726 tctttcatcttctcttctctct 35536747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 41080737 - 41080828
Alignment:
Q  219 gcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||| |||||| || |||||||| ||||||||||| | |||||||  || | ||||||||| |||| ||| |||| |||||||||||||||||    
T  41080737 gcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttctctttcatctcctcttctctct 41080828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 311
Target Start/End: Complemental strand, 30801802 - 30801712
Alignment:
Q  221 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||| || | |||||||||||||| ||||| || |||| ||| | ||||||||| |||| ||| |||| | |||| ||||||||||    
T  30801802 aatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctttcctctcatcttctctct 30801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 8956762 - 8956883
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | || ||||||||||| || || ||||||||| |||||| ||||||||| |||  || | |  |||||| |||||||      
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcc 8956861  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| ||||| |||||||||||    
T  8956862 tctttcatcttctcttctctct 8956883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 36707501 - 36707456
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgt 258  Q
    |||||| |||||||||| || ||| |||||||||||||||||||||    
T  36707501 taggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 25413836 - 25413784
Alignment:
Q  228 cccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 280  Q
    ||||| |||||||||||||| ||||||||||||| || || | ||||||||||    
T  25413836 ccctttacacccacacaaaactctgacacgtggtaacctggaccccacacaaa 25413784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 32605941 - 32605897
Alignment:
Q  263 acatgaatcccacacaaacacactttttcttgcatctcctcttct 307  Q
    ||||| |||| |||||| ||||||||||||| |||||||||||||    
T  32605941 acatggatccaacacaagcacactttttctttcatctcctcttct 32605897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 47190960 - 47191023
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 280  Q
    |||||||||||||| ||| ||||||||||||| ||||||| ||||| || || | ||||||||||    
T  47190960 gtggcaatacacccttta-cacccacacaaaattctgacatgtggtaacttggaccccacacaaa 47191023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 53581792 - 53581835
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  53581792 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 53581835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 312
Target Start/End: Complemental strand, 6260101 - 6259979
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||||||||||||| ||||| |||||||| |||||||||| ||||||||||| ||||||||| |||| |||||||||| | | |||| || ||||||||     
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttc 6260002  T
Q  290 tcttgcatctcctcttctctctc 312  Q
    |||| ||||||||||||||||||    
T  6260001 tctttcatctcctcttctctctc 6259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 39557601 - 39557496
Alignment:
Q  206 acaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctctt 305  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||| | |||| |||| |||||||| ||||  ||||||||||    
T  39557601 acaatcataggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcctctt 39557502  T
Q  306 ctctct 311  Q
    ||||||    
T  39557501 ctctct 39557496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 28177798 - 28177896
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||   |||||||||| ||||    
T  28177798 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttctcttttctctcctcttccctct 28177896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 6679721 - 6679819
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||||||| | ||| |||||||||| ||| ||||   |||||||||||||||    
T  6679721 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctcttttctctcctcttctctct 6679819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 18520981 - 18520863
Alignment:
Q  193 taatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttct 292  Q
    |||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| |||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 18520882  T
Q  293 tgcatctcctcttctctct 311  Q
    |  ||||||||||||||||    
T  18520881 tttatctcctcttctctct 18520863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 2740274 - 2740395
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||     
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   ||||| |||||||||    
T  2740374 tcttttctctccccttctctct 2740395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 14831814 - 14831935
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  ||| || ||||||||||||||||| || ||||||||| ||||||||||||||| ||||| || ||||| ||||| ||||||||     
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  290 tcttgcatctcctcttctctct 311  Q
    | ||   |||||||||||||||    
T  14831914 ttttttttctcctcttctctct 14831935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 40145407 - 40145528
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| |||||| ||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  40145507 tcttttctctcctcttctctct 40145528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 26720539 - 26720637
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||| ||||| ||||| |||||||| ||||   ||| |||||||||||    
T  26720539 taggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctct 26720637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 26990288 - 26990386
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||| ||||| ||||| |||||||| ||||   ||| |||||||||||    
T  26990288 taggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctct 26990386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 33149738 - 33149617
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||| ||||||||| || |||||||||||||||| |||||||| ||||| || ||||| ||||| ||||||||     
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  33149638 tcttttctctcctcttctctct 33149617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 2252245 - 2252147
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  2252245 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 2252147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 3921342 - 3921244
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  3921342 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 3921244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 35943969 - 35943871
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| |  || ||||||||||||||||||||||||| || || || ||||||||||| |||||||| |||| | ||||||||| |||||    
T  35943969 taggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctctttcctctcctcttttctct 35943871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 33825424 - 33825303
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||||||||| |||  ||| || ||||||||||||||| |||| ||||||||| |||||||||||||||| |||  |||| |  |||||| ||||||||     
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||  |||| |||||||||||    
T  33825324 tcttttatcttctcttctctct 33825303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 35785199 - 35785320
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || ||||||||||||||||||||||||| || || || ||||| ||||| ||||||||     
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||| ||||||||||    
T  35785299 tcttttctctcatcttctctct 35785320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 36733042 - 36732921
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||| ||||||||||| || ||||||||||||||||||||||| | ||||| || | ||| ||||| ||||||||     
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  36732942 tcttttctctcctcttctctct 36732921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 16327924 - 16328023
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 312  Q
    |||||||||||||| || || ||||||||| |||||||||||||||| |||  || | | ||||||| ||||||||||||| ||| | ||||||||||||    
T  16327924 taggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctttcattttctcttctctctc 16328023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 13811675 - 13811773
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| |  || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||    
T  13811675 taggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttctctctcctcttctctct 13811773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 42414379 - 42414281
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||   | |||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttttctttcctcttctctct 42414281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 38296203 - 38296320
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  || ||| |||||| ||||||||| ||||| ||||||||||||||| ||||||| |  || || |||| |||||| ||||||||     
T  38296203 gagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttc 38296302  T
Q  290 tcttgcatctcctcttct 307  Q
    || | |||||||||||||    
T  38296303 tcattcatctcctcttct 38296320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 9603813 - 9603934
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||  ||||||| | || ||||| ||||||||||||||||| |||||| ||| | |||| |||| ||||||||     
T  9603813 gagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttc 9603912  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| ||| || ||||||||||    
T  9603913 tctttcatttcgtcttctctct 9603934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 31009032 - 31009109
Alignment:
Q  234 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| | || | ||| |||||||||||    
T  31009032 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctcttctcttctctct 31009109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 39688971 - 39688876
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||| ||||| |||||||||||||||||||| | ||||||| ||||| ||| || ||  ||||||| |||| | |||  ||||||||||    
T  39688971 gtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttctctttcttcttttcttctctct 39688876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 15409687 - 15409589
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| |||||||  | || ||||||||||||||||||||||||| | |||||| | ||| ||||| |||||| | ||||   |||||||||||||||    
T  15409687 taggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctcttttctctcctcttctctct 15409589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  191 agtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaat 249  Q
    |||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 21370048 - 21370121
Alignment:
Q  234 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttct 307  Q
    |||||||| ||||||||||||| |||||||| || | ||| |||||||||| ||| |||| | |||| ||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctcatcttct 21370121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 33801635 - 33801572
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 280  Q
    |||||||||||| | ||| ||||||||||||| ||||||||||||  || || ||||||||||||    
T  33801635 gtggcaatacactcttta-cacccacacaaaattctgacacgtggcaacttggatcccacacaaa 33801572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 17820104 - 17819983
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  ||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||| || || | |||||||||||||| |||     
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| |||||||||||||||||    
T  17820004 tctttcatctcctcttctctct 17819983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 28863458 - 28863576
Alignment:
Q  193 taatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttct 292  Q
    |||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| |||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  293 tgcatctcctcttctctct 311  Q
    |  ||||||||||||||||    
T  28863558 tttatctcctcttctctct 28863576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 7465835 - 7465714
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||| ||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||||||||| ||||||||     
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||  ||||| ||||||||||    
T  7465735 tcttttatctcttcttctctct 7465714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 17473020 - 17473141
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||| ||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||     
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  17473120 tcttttctctcctcttctctct 17473141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 5574588 - 5574485
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  ||| || ||||||||||||||||| || ||||||||| ||||||||||||||| ||||| || ||||| ||||| ||||||||     
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  290 tctt 293  Q
    ||||    
T  5574488 tctt 5574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 9058480 - 9058601
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| ||||||||     
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  9058580 tcttttctctcctcttctctct 9058601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 33436200 - 33436079
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || |||||||||||||||||| |||||| ||||| || | ||| ||||| ||||||||     
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| | |||| ||||||||||    
T  33436100 tctttcctctcatcttctctct 33436079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 40613979 - 40613899
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 293  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| |||||| | ||| ||||| |||||||| ||||    
T  40613979 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttctctt 40613899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 2997564 - 2997466
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  2997564 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 2997466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 19930917 - 19930799
Alignment:
Q  193 taatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttct 292  Q
    |||||||||||  |||  | ||||||||||||||||| || ||| ||||||||||||||||||||| ||||  || | ||| |||||||||||||| |||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  293 tgcatctcctcttctctct 311  Q
    |   |||||||||||||||    
T  19930817 tttctctcctcttctctct 19930799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 13438343 - 13438464
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| ||||||| || || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  13438443 tcttttctctcctcttctctct 13438464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 38273242 - 38273121
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  ||| || ||| ||||||||||||| |||||||||||||||||||||||||||| | |||||| | ||| ||| | ||||||||     
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||| ||||||||    
T  38273142 tcttttctctcctattctctct 38273121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 3154193 - 3154265
Alignment:
Q  240 acacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 312  Q
    |||||||||||||||||||||||||||| ||||| | |||||||| ||| |||| ||||||||||| ||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctctttcatctcctcttttctctc 3154265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 15428814 - 15428719
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||| ||  | || ||||| |||||||| ||| |||| ||||||||||| |||||    
T  15428814 gtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattttctctttcatctcctcttttctct 15428719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 43490144 - 43490242
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  43490144 taggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttatctttcttcttctcttctctct 43490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 10249482 - 10249361
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| |||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   ||||||||| |||||    
T  10249382 tcttttctctcctcttttctct 10249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 20700815 - 20700936
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | || |||||||||||||| || || || ||||||||||||||||||| ||||| || | ||| || || ||||||||     
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| | |||||||||||||||    
T  20700915 tctttcctctcctcttctctct 20700936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 28381755 - 28381634
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  |  ||||||||||||||||||||||||| |||||||| |  || ||||| ||||||||     
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||| ||||||||||    
T  28381655 tcttttctctcatcttctctct 28381634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 32505748 - 32505627
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| |||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  290 tcttgcatctcctcttctctct 311  Q
    | ||   |||||||||||||||    
T  32505648 tattttctctcctcttctctct 32505627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 40701478 - 40701599
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || ||||||||||||||||||||||||| || || || | ||| ||||| ||||||||     
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||| ||||||||||    
T  40701578 tcttttctctcatcttctctct 40701599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 2533150 - 2533244
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||| || || ||||| ||||||||||||||||||| | |||||  | ||| ||||| |||||||||||||  ||||||||||||||||    
T  2533150 gtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacactttttcttttatctcctcttctctct 2533244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 26891581 - 26891530
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 264  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  26891581 taggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcac 26891530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 38732384 - 38732475
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||| ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  38732384 caatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctct 38732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 42257216 - 42257310
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttct 307  Q
    |||||||||||||| |  || ||||||||| ||||||||||||||||| |||||| | ||| ||||| |||||||| ||||   |||||||||||    
T  42257216 taggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttct 42257310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 44151928 - 44152048
Alignment:
Q  195 atgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaa-tctgacacgtggtcacat---gaatcccacacaaacacacttttt 290  Q
    |||||||||  ||||  ||||||| |||||||| | |||||||| ||| ||||| ||||||||||||| |  |   ||||||||||||| |||||||| |    
T  44151928 atgatacatagacaactataggtgacaatacactctttaacacctacaaaaaaaatctgacacgtggttatgtagtgaatcccacacaagcacactttct 44152027  T
Q  291 cttgcatctcctcttctctct 311  Q
    ||| |||||||||||||||||    
T  44152028 ctttcatctcctcttctctct 44152048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 45097812 - 45097714
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  45097812 taggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 45097714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 30915463 - 30915584
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || || |||||| ||||||||||||||| ||||| || | |||  |||| ||||||||     
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||| ||||||||||    
T  30915563 tcttttctctcatcttctctct 30915584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 17823784 - 17823852
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgt 258  Q
    ||||||||||||||  |||  | ||||||||||||||  ||| ||||||||||||||||||||||||||    
T  17823784 gagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgt 17823852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 3440002 - 3440100
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||| |||  |||||||||||||||||| ||| ||| | || || | ||| ||||| |||| ||| |||| | |||||||||||||||    
T  3440002 taggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttcctctcctcttctctct 3440100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 13365380 - 13365474
Alignment:
Q  217 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||| ||||||| |||||||||||||||||||||| |||  || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  13365380 tggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 13365474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 27864704 - 27864772
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgt 258  Q
    ||||||||||||||  |||  | || |||||||||||||| || ||| |||||||||||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgt 27864772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 310
Target Start/End: Original strand, 41575138 - 41575258
Alignment:
Q  191 agtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatccc-acacaaacacactttt 289  Q
    |||||||||||||  |||  | ||| ||| ||||||||| || |||  ||||||||||| ||||| |||||||  || | ||| |||||| ||||||||     
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  290 tcttgcatctcctcttctctc 310  Q
    |||| ||||||||||||||||    
T  41575238 tctttcatctcctcttctctc 41575258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 36168866 - 36168957
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| || ||||| ||||||||||||| |||||||||| |||||| | ||| ||||| || ||||| ||||   |||||| ||||||||    
T  36168866 caatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctcttttctctcctattctctct 36168957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 4060685 - 4060783
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacacttt 288  Q
    ||||||||||||||  |||  | |||||| |||||||||  || ||| ||||||||||||||||||||| || || || ||||| || || ||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4060783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 38882913 - 38882840
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 264  Q
    ||||||||||||||  |||  | |||||||||||| |||| || ||| ||||||||||||||||||||| |||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcac 38882840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 33436211 - 33436280
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtg 259  Q
    ||||||||||||||  |||  | ||| ||||||||||||  || ||||||||| ||||||||||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtg 33436280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 16096914 - 16096871
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  16096914 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 16096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 42849793 - 42849836
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  42849793 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 42849836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 5957831 - 5957951
Alignment:
Q  191 agtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacacttttt 290  Q
    |||||||||||||  ||| || ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| |    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  291 cttgcatctcctcttctctct 311  Q
    ||| | |||||||||||||||    
T  5957931 ctttcctctcctcttctctct 5957951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 37038502 - 37038600
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| | || | |||||||||||||||    
T  37038502 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctct 37038600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 15197333 - 15197454
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  ||| || ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   ||||||||| |||||    
T  15197433 tcttttctctcctcttttctct 15197454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 34307239 - 34307337
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||||| ||| |||||  ||||||| |||| | ||| |||||||||||    
T  34307239 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctctttcttcttctcttctctct 34307337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 43414654 - 43414560
Alignment:
Q  217 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| |||||| || |||||||||||||||||| ||||||||||||||| ||||| ||||| |||||||| ||||   |||||||||||||||    
T  43414654 tggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctcttttctctcctcttctctct 43414560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 12831047 - 12831168
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| |||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  12831147 tcttttctctcctcttctctct 12831168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 34012396 - 34012275
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||| ||||||||| || |||||||||||||||| |||||||| ||||| || ||||| ||||| ||||||||     
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  34012296 tcttttctctcctcttctctct 34012275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 1180042 - 1179919
Alignment:
Q  188 ccgagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactt 287  Q
    ||||||||||||||||  |||  | ||||||| ||||||||| || ||||||||||||||||||||||||| ||||  || || || ||||| |||||||    
T  1180042 ccgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactt 1179943  T
Q  288 tttcttgcatctcctcttctctct 311  Q
    | ||||   |||||||||||||||    
T  1179942 tctcttttctctcctcttctctct 1179919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 10621164 - 10621066
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| | |||||  ||||| ||||| |||||||| ||||   |||||||||||||||    
T  10621164 taggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttttctctcctcttctctct 10621066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 14547945 - 14548043
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||    
T  14547945 taggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctct 14548043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 16383400 - 16383498
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  16383400 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 16383498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 17443825 - 17443946
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    |||| |||||||||  |||| | |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||| |||||||     
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| ||||| |||||||||||    
T  17443925 tctttcatcttctcttctctct 17443946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 8841509 - 8841413
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctct 309  Q
    ||||||||| ||||||| || |||||||||||||||||| |||||| ||||| || | ||| ||||| |||||||| |||| | |||||||||||||    
T  8841509 taggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctct 8841413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 40424020 - 40423922
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||   |||||||||||||||    
T  40424020 taggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctct 40423922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 504221 - 504100
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||| ||     
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||| ||||||||||    
T  504121 tcttttctctcatcttctctct 504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 4854963 - 4854842
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| |||||||| ||| |||||||||| | |||| |||||| | ||  ||||| ||||||||     
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  4854863 tcttttctctcctcttctctct 4854842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 42221515 - 42221636
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||| |||||||  |||  |||||||||||||||||||||||||  ||| ||| | |||| |||| ||||||||     
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| |||||| ||||||||||    
T  42221615 tctttcatctcatcttctctct 42221636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 15048258 - 15048160
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttc-ttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||| | |||||| | ||| ||||| |||||||| || ||  ||||||||||||||||    
T  15048258 taggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttctctttttatctcctcttctctct 15048160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 24307870 - 24307772
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| ||||| |||||||||||||||||||| | |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  24307870 taggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 24307772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 44507187 - 44507113
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 264  Q
    ||||||||||||||  |||  | ||||||| ||||||| | |||||||||||||||||||||||||||| |||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcac 44507113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 9122229 - 9122306
Alignment:
Q  234 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||||| || ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctct 9122306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 23122697 - 23122576
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | || |||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||| || || ||||||||     
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||| ||||||||    
T  23122597 tcttttctctcctgttctctct 23122576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 16056471 - 16056380
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  16056471 caatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 16056380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 2547188 - 2547099
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 280  Q
    |||| |||||||||| || | | || |||||||||||||| ||| ||||||||||||| ||||||||||||  || || ||||||||||||    
T  2547188 gagtgatgatacatgtaccaccctatgtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggatcccacacaaa 2547099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 38229429 - 38229502
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 264  Q
    |||| |||||||||| ||| || ||||||||||||| | ||| | ||||||||||||||||||||| ||||||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacgctcctga-cacccacacaaaaatctgacatgtggtcac 38229502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 10284701 - 10284610
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||| | || |||||||||||||||| |||||||| ||||| || | ||| ||||| |||||||| |||| | | || ||||||||||    
T  10284701 caatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctctttcctttcatcttctctct 10284610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 15259002 - 15258908
Alignment:
Q  217 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||| ||||  ||| ||||| |||||||||||| |||||||| || | ||  ||||| |||| ||| |||| | |||||||||||||||    
T  15259002 tggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctct 15258908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 20075034 - 20074964
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    ||||||||||||||  |||  | ||||||||||||||| | || ||||||||| |||||| ||||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 2165876 - 2165960
Alignment:
Q  195 atgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 280  Q
    |||||||||| || |||  | ||| |||||||||| ||| ||||||||||||| ||||||||||||  || |||| ||||||||||    
T  2165876 atgatacatgtaccatcccatgtgacaatacacccttta-cacccacacaaaattctgacacgtggcaacctgaaccccacacaaa 2165960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 24307652 - 24307692
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctga 253  Q
    |||||||||||||| || || ||||||||||||||||||||    
T  24307652 taggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 29705528 - 29705485
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  29705528 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 29705485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 31976271 - 31976369
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||   |||||||||||||||    
T  31976271 taggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctcttttctctcctcttctctct 31976369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 11427641 - 11427739
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| || || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||    
T  11427641 taggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctct 11427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 31953107 - 31953009
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||| |||  || | | |||||||||||||||| |||| ||||| |||||||||||    
T  31953107 taggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttctctttcatcttctcttctctct 31953009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 32869701 - 32869799
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||    
T  32869701 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctct 32869799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 4231571 - 4231669
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  4231571 taggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 4231669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 15508101 - 15508003
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  15508101 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 15508003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 15990119 - 15990021
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  15990119 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 15990021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 22880755 - 22880637
Alignment:
Q  193 taatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttct 292  Q
    |||||||||||  |||  | ||||||||||||||||| || |||||||||||||| |||||||||| ||||| || | ||| ||||| |||||||| |||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  293 tgcatctcctcttctctct 311  Q
    |   |||||||||||||||    
T  22880655 tttctctcctcttctctct 22880637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 30341437 - 30341339
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  30341437 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 30341339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 17598554 - 17598675
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||||||||||| |  || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  17598654 tcttttctctcctcttctctct 17598675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 311
Target Start/End: Complemental strand, 23128196 - 23128106
Alignment:
Q  221 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||| || || ||||||||||||||||||||||||| ||||| || ||||||||||| |||||||| ||||   ||||||||| |||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctct 23128106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 12732482 - 12732603
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  ||| || || ||||||||| |  | || |||||||||||||||||||||||||||  |  || |||||||| || |||| |||     
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttc 12732581  T
Q  290 tcttgcatctcctcttctctct 311  Q
    |||| |||||||||||||||||    
T  12732582 tctttcatctcctcttctctct 12732603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 28536563 - 28536467
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| ||||| |||||||||||||||||||||||  |||||  || | ||||||||| |||||||| ||||  |||| |||||| ||||    
T  28536563 taggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctcttttatcttctcttccctct 28536467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 29857854 - 29857948
Alignment:
Q  217 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||  |||||||||||||||||||||||||||| || || || ||||| || || |||||||| ||||   ||| |||||||||||    
T  29857854 tggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctct 29857948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 9379782 - 9379691
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||| ||||||| |||||||| |||||||||| ||  || ||| |||||||||||| ||| |||| ||||| ||||| |||||    
T  9379782 caatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctttcatcttctcttttctct 9379691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 31109477 - 31109426
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 264  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  31109477 taggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcac 31109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 6209565 - 6209444
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | |||||||||||||||   || |||| |||||||||||||| ||||| ||||| || | ||| ||| | ||||||||     
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  6209465 tcttttctctcctcttctctct 6209444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 30870057 - 30870135
Alignment:
Q  233 aacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||| | |||||||| ||| ||||||||||| | ||| ||||| |||| ||| |||| | |||||||||||||||    
T  30870057 aacacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctct 30870135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 7367715 - 7367672
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  7367715 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 7367672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 26669943 - 26669986
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  26669943 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 26669986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 32813270 - 32813368
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| ||||   |||||||||||||||    
T  32813270 taggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctcttttctctcctcttctctct 32813368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 9474976 - 9474855
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||||||||||||     
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  9474876 tcttttctctcctcttctctct 9474855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 51898760 - 51898662
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| | || | |||||||||||||||    
T  51898760 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctct 51898662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 38632421 - 38632300
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  |||||| ||||||||||||||||||||| ||||| || | ||| ||||| |||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  38632321 tcttttctctcctcttctctct 38632300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 37649221 - 37649319
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||  |||   |||||||||||||||    
T  37649221 taggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttcccttttctctcctcttctctct 37649319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 41758832 - 41758926
Alignment:
Q  217 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||| || ||| ||||||||||||||||||||| |||||||| | ||| |||||||||||||| ||||   |||||||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttttctctcctcttctctct 41758926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 2581915 - 2582036
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  290 tcttgcatctcctcttctctct 311  Q
    | ||   |||||||||||||||    
T  2582015 ttttttctctcctcttctctct 2582036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 47452420 - 47452299
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||| ||||||||| || |||||||||||||||||| |||||| ||||| || ||||| ||||| ||||||||     
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  47452320 tcttttctctcctcttctctct 47452299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 44454005 - 44454100
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||| | ||| | |||||||||||||||||||| ||||| || || ||||||||||| ||||||||||||| | |||| ||||||||||    
T  44454005 gtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttctttcctctcatcttctctct 44454100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 3000318 - 3000440
Alignment:
Q  189 cgagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacacttt 288  Q
    |||||||||||||||  |||  | ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| ||||||||    
T  3000318 cgagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 3000417  T
Q  289 ttcttgcatctcctcttctctct 311  Q
     ||||   |||| ||||||||||    
T  3000418 ctcttttctctcatcttctctct 3000440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 50591077 - 50590979
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  50591077 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctct 50590979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 26440764 - 26440837
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 293  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| ||||| || || |||||||| ||||    
T  26440764 caatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctctt 26440837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 27564835 - 27564714
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || |||||||||||||||||||||||||  |||| || | ||| ||||| ||||||||     
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   |||||||||||||||    
T  27564735 tcttttctctcctcttctctct 27564714  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 5959074 - 5958979
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||| ||| | ||| |||||  ||||||| |||| | ||| |||||||||||    
T  5959074 gtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctct 5958979  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 38595177 - 38595275
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| |||||||| ||||   |||| ||||||||||    
T  38595177 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctct 38595275  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 48716382 - 48716261
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  |||  | ||||||||||||||||  || ||| ||||||||||||||||||||| ||||| || | ||| ||||| ||||||||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   | |||||||||||||    
T  48716282 tcttttctttcctcttctctct 48716261  T

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Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 750213 - 750302
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 280  Q
    |||| |||||||||| || |||  | |||||||||||||| ||| ||||||||||||| ||||||||||||| ||||| | ||||||||||    
T  750213 gagtgatgatacatgtaccatcccatgtggcaatacacccttta-cacccacacaaaattctgacacgtggtaacatggaccccacacaaa 750302  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 37926515 - 37926417
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| |  |||||||||||| ||||||||||||||||| |||||| |||||  ||||  ||||||| ||||   ||| |||||||||||    
T  37926515 taggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctcttttctcttctcttctctct 37926417  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 41608570 - 41608472
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||| || ||| | |||  ||||  ||||||| |||| | ||| |||||||||||    
T  41608570 taggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttctctttcttcttctcttctctct 41608472  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 44548453 - 44548355
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||  || | ||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||| ||||||||||    
T  44548453 taggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcttcttctctct 44548355  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 50630481 - 50630579
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| || ||   ||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||    
T  50630481 taggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctct 50630579  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 43132 - 43253
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttt 289  Q
    ||||||||||||||  ||| || |||| | ||||||| || || ||||||||||||||||||||||||| ||||| || |  || ||||| ||||||||     
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  290 tcttgcatctcctcttctctct 311  Q
    ||||   ||||||| |||||||    
T  43232 tcttttctctcctcctctctct 43253  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 8346465 - 8346385
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 293  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||  ||||| |||||||| ||||    
T  8346465 taggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctctt 8346385  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 6260893 - 6260991
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||| |||||||| || | ||| || || |||| ||| | || | |||||||||||||||    
T  6260893 taggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttctatttcttctcctcttctctct 6260991  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 45044637 - 45044539
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||  || ||||||| |||||||||||||| || | |||||| | ||| |||||||||| ||| ||||   ||| |||||||||||    
T  45044637 taggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctcttttctcttctcttctctct 45044539  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 3302589 - 3302512
Alignment:
Q  234 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||||||||||  ||| ||| | |||| |||| |||||||| | || |||||| ||||||||||    
T  3302589 acacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctttttcatctcatcttctctct 3302512  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 13414791 - 13414864
Alignment:
Q  220 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 293  Q
    |||||||||| || |||||||||||||||||| |||||| ||||| || | ||||||||| |||| ||| ||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctctt 13414864  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 4401520 - 4401451
Alignment:
Q  190 gagtaatgatacatgcacaatcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||| |||||||||| || | | || |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  4401520 gagtgatgatacatgtaccaccctatgtggcaatacacccttta-cacccacacaaaattctgacacgtgg 4401451  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 11152455 - 11152405
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtca 263  Q
    ||||||||||||||||| |  ||| ||||||||||||||||||||| ||||    
T  11152455 taggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtca 11152405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 47748466 - 47748563
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| || ||||||| | |||||||||||| |||| || ||| ||||| |||||  | ||||| |||| | ||| |||||||||||    
T  47748466 taggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttctctttcttcttctcttctctct 47748563  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 7447991 - 7447948
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  7447991 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 7447948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 50448194 - 50448237
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  50448194 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 50448237  T

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Target: scaffold1268 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 1006 - 908
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||| ||||| |||||||| ||||| |||||||| |||| | |||||||||||||||    
T  1006 taggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctct 908  T

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Target: scaffold1267 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 1006 - 908
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||| ||||| |||||||| ||||| |||||||| |||| | |||||||||||||||    
T  1006 taggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctct 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 152523 - 152619
Alignment:
Q  215 ggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||| |||||| ||||||| |||| | ||| |||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttctcttctctct 152619  T

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Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 4056 - 4150
Alignment:
Q  217 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    ||||||||||||  |||||||||||||||||||||||||||| || || || ||||| || || |||||||| ||||   ||| |||||||||||    
T  4056 tggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctct 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 17075 - 17157
Alignment:
Q  211 cataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 293  Q
    ||||||| |||||||| ||||  ||| |||||||||||||||||| ||||||||||| | ||| ||||| |||| ||| ||||    
T  17075 cataggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctt 17157  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 10186 - 10088
Alignment:
Q  213 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 311  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||| ||||| || | | |  |||| |||||||| ||||   |||||||||||||||    
T  10186 taggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctcttttctctcctcttctctct 10088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 851 - 808
Alignment:
Q  216 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 260  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  851 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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