View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2182_low_9 (Length: 253)

Name: NF2182_low_9
Description: NF2182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2182_low_9
NF2182_low_9
[»] chr1 (13 HSPs)
chr1 (1-240)||(30576514-30576753)
chr1 (96-191)||(26661548-26661643)
chr1 (105-191)||(17294614-17294700)
chr1 (102-194)||(66504-66596)
chr1 (92-194)||(9955942-9956045)
chr1 (96-191)||(26661924-26662019)
chr1 (96-191)||(31767187-31767282)
chr1 (92-191)||(37850622-37850721)
chr1 (96-194)||(5319991-5320089)
chr1 (110-191)||(32594756-32594837)
chr1 (154-194)||(10351194-10351234)
chr1 (154-194)||(22793312-22793352)
chr1 (154-194)||(44091928-44091968)
[»] chr4 (11 HSPs)
chr4 (92-194)||(15841388-15841490)
chr4 (96-186)||(22027985-22028075)
chr4 (126-194)||(41603245-41603313)
chr4 (102-186)||(22028399-22028483)
chr4 (109-194)||(54741215-54741300)
chr4 (103-194)||(3244482-3244573)
chr4 (109-182)||(2891859-2891932)
chr4 (154-191)||(44620697-44620734)
chr4 (101-186)||(45496847-45496932)
chr4 (102-191)||(50630785-50630874)
chr4 (154-194)||(28034263-28034303)
[»] chr2 (15 HSPs)
chr2 (96-194)||(962632-962730)
chr2 (81-194)||(2336658-2336771)
chr2 (109-194)||(33561490-33561575)
chr2 (79-192)||(2803175-2803288)
chr2 (96-191)||(15511521-15511616)
chr2 (92-163)||(18204406-18204477)
chr2 (91-194)||(29873558-29873661)
chr2 (96-191)||(36178631-36178726)
chr2 (127-186)||(38796677-38796736)
chr2 (96-194)||(40163398-40163497)
chr2 (102-191)||(5542657-5542746)
chr2 (101-194)||(40733551-40733644)
chr2 (154-194)||(33953855-33953895)
chr2 (127-194)||(37842551-37842619)
chr2 (103-187)||(41678401-41678484)
[»] chr7 (6 HSPs)
chr7 (127-191)||(36534841-36534905)
chr7 (110-194)||(45434670-45434754)
chr7 (103-194)||(34218067-34218158)
chr7 (110-191)||(23417-23498)
chr7 (127-191)||(1085673-1085737)
chr7 (154-194)||(42282102-42282142)
[»] chr3 (11 HSPs)
chr3 (94-194)||(25317192-25317292)
chr3 (93-187)||(47964541-47964635)
chr3 (129-187)||(54451235-54451293)
chr3 (110-194)||(12114602-12114686)
chr3 (96-191)||(41359791-41359886)
chr3 (92-191)||(45395675-45395774)
chr3 (96-186)||(32589745-32589835)
chr3 (109-191)||(39914289-39914371)
chr3 (102-191)||(22304606-22304695)
chr3 (102-191)||(35946559-35946648)
chr3 (127-191)||(3384323-3384387)
[»] chr8 (10 HSPs)
chr8 (115-177)||(5974596-5974658)
chr8 (90-194)||(5274809-5274913)
chr8 (127-191)||(8918821-8918885)
chr8 (91-194)||(4154302-4154404)
chr8 (79-194)||(40991787-40991902)
chr8 (96-194)||(40518616-40518714)
chr8 (154-194)||(4154750-4154790)
chr8 (127-191)||(9483244-9483308)
chr8 (154-194)||(9620760-9620800)
chr8 (91-143)||(20995437-20995489)
[»] chr6 (4 HSPs)
chr6 (105-194)||(10074026-10074115)
chr6 (96-194)||(10074389-10074487)
chr6 (102-191)||(2579904-2579993)
chr6 (102-191)||(3409296-3409385)
[»] chr5 (3 HSPs)
chr5 (92-191)||(26074649-26074748)
chr5 (110-184)||(25327979-25328053)
chr5 (102-194)||(41632816-41632908)
[»] scaffold0734 (1 HSPs)
scaffold0734 (102-191)||(5433-5523)


Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30576514 - 30576753
Alignment:
Q  1 cagatctaccctccttactggtgcgtcaaagggtcttctcctattgggtaatgaggggagcccggaggatcaaccacaccacattgggctcagagcaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30576514 cagatctaccctccttactggtgcgtcaaagggtcttctcctattgggtaatgaggggagcccggaggatcaaccacaccacattgggctcagagcaaca 30576613  T
Q  101 acacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctacttttgggtcg 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30576614 acacaagtgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctacttttgggtcg 30576713  T
Q  201 accactaaactaacttaaacttgctacacaacatctctgc 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30576714 accactaaactaacttaaacttgctacacaacatctctgc 30576753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 26661548 - 26661643
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||| ||||||||||||||||||  ||| | ||||||||||| ||||| || |  || |||||||||||||||| |||| ||||||||||| ||||    
T  26661548 caaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttact 26661643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 17294700 - 17294614
Alignment:
Q  105 aagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||||||||  ||| | ||||||||||| ||||| || |  || |||||||||||| ||| |||||||||||||||| ||||    
T  17294700 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttact 17294614  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 66504 - 66596
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||||||||||||  || | | ||||||||||| ||||| |  ||||| ||||| |||||| ||| |||| ||||||||||| |||||||    
T  66504 cacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttactttt 66596  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 9956045 - 9955942
Alignment:
Q  92 agagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtct-atgggtcctctcactcataaagtgttcaacctctac 190  Q
    ||||||||  ||||||| |||||||||| ||| | ||||||||||| ||||| || |  || | ||||||||||| ||| |||| ||||||||||| |||    
T  9956045 agagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttac 9955946  T
Q  191 tttt 194  Q
    ||||    
T  9955945 tttt 9955942  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 26661924 - 26662019
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||| |||||||| |||||||||  ||| | ||||||||||| ||||| || |  || |||||||| ||||||| |||| ||||||||||| ||||    
T  26661924 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttact 26662019  T

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Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 31767187 - 31767282
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||| |||||||| ||| |||| | ||| | ||||||||||| ||||| ||||| ||  ||||||||||| ||| |||| ||||||||||| ||||    
T  31767187 caaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttact 31767282  T

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Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 37850622 - 37850721
Alignment:
Q  92 agagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||  |||||| ||||||||||  ||| | ||| || |||| |||| |||||| || ||||||| |||| ||| |||| ||||||||||||||||    
T  37850622 agagcaaccgcacaagtgagagagacaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttataaggtgttcaacctctact 37850721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 5319991 - 5320089
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||| ||| |||| ||||||||| |||| | ||||||||||| ||||| |  |  || |||||||||||||||| |||| ||||||||| | |||||||    
T  5319991 caaccacataagcaagagagacactacactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttactttt 5320089  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 32594756 - 32594837
Alignment:
Q  110 agagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||||||||  ||| | ||||||||||| |||||||| |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  32594756 agagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttact 32594837  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 10351234 - 10351194
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  10351234 tatgggttctctcacttataaagtgttcaacctctattttt 10351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 22793352 - 22793312
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  22793352 tatggatcctctcacttataaagttttcaacctctactttt 22793312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 44091968 - 44091928
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||| |||||||| |||||||||||||||| |||||||    
T  44091968 tatgggttctctcacttataaagtgttcaacctttactttt 44091928  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 15841388 - 15841490
Alignment:
Q  92 agagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||||||| ||||||| ||||||||||| ||| | ||||||||||| ||||| || | ||| ||||  |||||||||| | ||||||||||||||| |||    
T  15841388 agagcaaccacacaagtgagagagacatcacactcttacccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacctccact 15841487  T
Q  192 ttt 194  Q
    |||    
T  15841488 ttt 15841490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 22027985 - 22028075
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacct 186  Q
    |||| ||| ||||||||||||||  ||||| ||||||||||| ||||| || ||||| |||||||||||| ||| |||| |||||||||||    
T  22027985 caaccacataagcgagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacct 22028075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 41603245 - 41603313
Alignment:
Q  126 tttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||||||| |||||||| ||||| |||||||| ||||||| |||||||| |||||||| ||||||    
T  41603245 tttacccaaaaccttaagacactatgtttatgggtcttctcacttataaagtgctcaacctccactttt 41603313  T

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Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 22028399 - 22028483
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacct 186  Q
    ||||||| |||||||||  ||| | |||||||||||||||||||| |  || |||||||||||| ||| |||| |||||||||||    
T  22028399 cacaagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacct 22028483  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 54741215 - 54741300
Alignment:
Q  109 gagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||| | |||| | ||| ||||||| |||||||| | ||| |||||||||||| ||| |||| ||||||||||| |||||||    
T  54741215 gagagagagactacactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttactttt 54741300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 3244482 - 3244573
Alignment:
Q  103 acaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||| |||||||||   ||||| ||||||||||| |||||||| |  || |||||||||||| ||| ||||  |||||||||| |||||||    
T  3244482 acaagtgagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttactttt 3244573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 2891859 - 2891932
Alignment:
Q  109 gagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttca 182  Q
    |||| |||||| ||| ||| ||||||||| ||||||||||| || ||||| |||||| ||| ||||||| ||||    
T  2891859 gagaaagacatcacactttaacccaaaaccttaagacattaggtttatggatcctcttacttataaagtattca 2891932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 44620734 - 44620697
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  44620734 tatgggtcctcttacttataaagtgttcaacctctact 44620697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 45496932 - 45496847
Alignment:
Q  101 acacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacct 186  Q
    |||||||| |||||||||  ||| | ||||||||||| |||||||| |  || ||| |||||||| ||| |||| |||||||||||    
T  45496932 acacaagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacct 45496847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 50630785 - 50630874
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||| |||||||||  ||| | ||||||||||| ||||| || |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  50630785 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttact 50630874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 28034303 - 28034263
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||| |||||||| ||||||||||||||||| ||||||    
T  28034303 tatgggttctctcacttataaagtgttcaacctccactttt 28034263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 962730 - 962632
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||| |||||||| |||| ||||  ||| | ||||||||||| |||||||| |  || |||||||||||||||| |||| ||||||||||| |||||||    
T  962730 caaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttactttt 962632  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 2336771 - 2336658
Alignment:
Q  81 acattgggctcagagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgtt 180  Q
    |||||||| |||||||||| ||||||| |||   ||||  |||| || ||||||||  ||||| ||||   | |||||||||||||||| ||||||||||    
T  2336771 acattgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgtt 2336672  T
Q  181 caacctctactttt 194  Q
    ||||||| ||||||    
T  2336671 caacctccactttt 2336658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 33561490 - 33561575
Alignment:
Q  109 gagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||| || ||| | ||||||||||| |||||||| |  || |||||||||||||||| |||||||||| |||||| ||||||    
T  33561490 gagagagatatcacactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccactttt 33561575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 2803175 - 2803288
Alignment:
Q  79 ccacattgggctcagagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtg 178  Q
    ||||||| ||| |||||| |||| ||||| |||   ||||| ||| ||||||||||||| ||||||||||| || |||||||| ||||  | ||| | ||    
T  2803175 ccacatttggcccagagccacaagacaagtgagttggacatcacacttttacccaaaacgttaagacattaagtttatgggtcatctcttttatagaatg 2803274  T
Q  179 ttcaacctctactt 192  Q
    ||||||||| ||||    
T  2803275 ttcaacctccactt 2803288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 15511521 - 15511616
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||| |||||||| |||||||||  ||| | ||||||||||  |||||||| |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  15511521 caaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttact 15511616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 18204406 - 18204477
Alignment:
Q  92 agagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcct 163  Q
    |||||||||||||||  ||||||||||  ||||||||||| |||||||||| ||| |  || ||||||||||    
T  18204406 agagcaacaacacaaatgagagagacaccacatttttacctaaaacattaaaacaatgagtttatgggtcct 18204477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 29873558 - 29873661
Alignment:
Q  91 cagagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctac 190  Q
    ||||||||| ||||||| ||||||||| | ||| | |||| |||||| ||||| || |  || |||| |||||| |||| ||||| ||||||||||| ||    
T  29873558 cagagcaaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccac 29873657  T
Q  191 tttt 194  Q
    ||||    
T  29873658 tttt 29873661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 36178631 - 36178726
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||| |||||||| |||||||||  ||| | ||||||||||| ||||| || |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  36178631 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttact 36178726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 38796677 - 38796736
Alignment:
Q  127 ttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacct 186  Q
    ||||||||||| ||||| ||||| || |||||||||||| ||| |||| |||||||||||    
T  38796677 ttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacct 38796736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 40163398 - 40163497
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacatt-aagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||| |||||||| |||||||||  ||| ||||||||||||| || |||||| || ||  ||||||| ||| ||| |||| ||||||||||| |||||||    
T  40163398 caaccacacaagcaagagagacaccacacttttacccaaaaccttaaagacactaggttaatgggtcatcttacttataaggtgttcaacctttactttt 40163497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 5542657 - 5542746
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||| |||||||||  ||| | ||||| ||||| ||||| || || || |||||||||||| ||| |||| ||||||||||| ||||    
T  5542657 cacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttact 5542746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 40733644 - 40733551
Alignment:
Q  101 acacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||||||||||||||  ||| | ||||||||||| |||||    || || |||||||||||| ||| |||| ||||||||| | |||||||    
T  40733644 acacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttactttt 40733551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 33953855 - 33953895
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||||||||||| ||| ||||||||||||| ||||||    
T  33953855 tatgggtcctctcacttatatagtgttcaacctccactttt 33953895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 37842619 - 37842551
Alignment:
Q  127 ttacccaaaac-attaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||||||| |||||||||||  || |||| ||||||||||| ||  | ||||||||||||||||||    
T  37842619 ttacccaaaaccattaagacattgagtttatgtgtcctctcacttatgcattgttcaacctctactttt 37842551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 41678401 - 41678484
Alignment:
Q  103 acaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctc 187  Q
    ||||| ||||||||| ||||| | |||| |||||| ||||| ||  | || |||||||||||||||| |||||||||| ||||||    
T  41678401 acaagtgagagagacgttacactcttactcaaaaccttaaggcaa-aggtttatgggtcctctcacttataaagtgtttaacctc 41678484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 36534841 - 36534905
Alignment:
Q  127 ttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||||| ||||||| ||| || |||||||||||| ||| |||| ||||||||||||||||    
T  36534841 ttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctact 36534905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 45434754 - 45434670
Alignment:
Q  110 agagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||||| ||| | ||||||||||| ||||| || || || |||||||||||| ||| |||| ||||||||||| |||||||    
T  45434754 agagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttactttt 45434670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 34218067 - 34218158
Alignment:
Q  103 acaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||||||||||||  ||| | ||||||||||| |||||||| |  || |||| ||||||||||| |||| ||||||||| | |||||||    
T  34218067 acaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttactttt 34218158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 23417 - 23498
Alignment:
Q  110 agagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||||||||  ||| | ||||||||||| ||||| || || || |||||||||||| ||| |||| ||||||||||| ||||    
T  23417 agagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttact 23498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 1085673 - 1085737
Alignment:
Q  127 ttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||||| ||||| || |  || |||||||||||| ||| |||||||||||||||| ||||    
T  1085673 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttact 1085737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 42282102 - 42282142
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||||| ||||| ||||||||||||||||| ||||||    
T  42282102 tatgggtcctttcacttataaagtgttcaacctccactttt 42282142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 25317292 - 25317192
Alignment:
Q  94 agcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctacttt 193  Q
    |||||| ||||||| |||||| ||| |||| ||||||||||||| ||||| ||  | || |||||||||||||| | | |||||| |||||||| |||||    
T  25317292 agcaaccacacaagtgagagacacactacacttttacccaaaaccttaaggcaacaagtttatgggtcctctcagttacaaagtgctcaacctccacttt 25317193  T
Q  194 t 194  Q
    |    
T  25317192 t 25317192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 47964541 - 47964635
Alignment:
Q  93 gagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctc 187  Q
    ||||||| ||||||| |||||||||   ||| | ||||||||||| ||||| || || || |||||||||||||||| ||| || ||||||||||    
T  47964541 gagcaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctc 47964635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 54451235 - 54451293
Alignment:
Q  129 acccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctc 187  Q
    ||||||||| |||||||| || || ||||| || |||||||||||||||||||||||||    
T  54451235 acccaaaaccttaagacaataagtatatggatcatctcactcataaagtgttcaacctc 54451293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 12114602 - 12114686
Alignment:
Q  110 agagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||||  ||| | ||||||||||| |||||||| |  || |||||||||||| ||| |||| ||||||||||| |||||||    
T  12114602 agagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactttt 12114686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 41359791 - 41359886
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||| |||||||||||||||||   ||||| ||||||||||| ||||| || |  || |||||||||||| ||| |||| || |||||||| ||||    
T  41359791 caaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttact 41359886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 45395675 - 45395774
Alignment:
Q  92 agagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||  |||||| ||||||||||  ||| | |||||||||||||||||||| |  || ||||| |||||| ||| |||| ||||| ||||| ||||    
T  45395675 agagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttact 45395774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 32589835 - 32589745
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacct 186  Q
    |||| |||||||| ||||||||||  || | ||||||||||| ||||| || |  || |||||||||||| ||| |||| |||||||||||    
T  32589835 caaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 32589745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 39914371 - 39914289
Alignment:
Q  109 gagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||||  ||| | ||| |||||| |||||| ||||| || |||||||||||| | | |||| ||||||||||||||||    
T  39914371 gagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctact 39914289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 22304695 - 22304606
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||| |||||||||  ||| | ||||||||||| ||||| || | ||| |||||||||||| ||| |||| || |||||||| ||||    
T  22304695 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttact 22304606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 35946648 - 35946559
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||| |||||||||  ||| ||||||||||||| ||||| ||    || |||||||||||| ||| |||| ||||||||||| ||||    
T  35946648 cacaagcaagagagacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttact 35946559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 3384323 - 3384387
Alignment:
Q  127 ttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||||| ||||| ||||| || ||||||||||||  || |||||||||| ||||| ||||    
T  3384323 ttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatact 3384387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 5974658 - 5974596
Alignment:
Q  115 gacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagt 177  Q
    ||||||||||||| ||| ||||||||||||||||| || ||| |||| ||||||| |||||||    
T  5974658 gacattacattttaaccaaaaacattaagacattaggtttataggtcatctcacttataaagt 5974596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 194
Target Start/End: Complemental strand, 5274913 - 5274809
Alignment:
Q  90 tcagagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctcta 189  Q
    ||||||||||||||||||||| |||||||| ||| | |||| |||||  ||||| || |   | |||||||| || || | ||||||||||||||||||     
T  5274913 tcagagcaacaacacaagcgatagagacatcacactcttactcaaaatcttaaggcaatgattttatgggtcttcccatttataaagtgttcaacctctc 5274814  T
Q  190 ctttt 194  Q
    |||||    
T  5274813 ctttt 5274809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 8918821 - 8918885
Alignment:
Q  127 ttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||||| ||||| || || || |||||||||||| ||| |||||||||||||||| ||||    
T  8918821 ttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttact 8918885  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 4154302 - 4154404
Alignment:
Q  91 cagagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctac 190  Q
    ||||||||| | ||||  ||||||||||| |||   |||||||||| |||||| || |  || |||||||| ||||||| ||||||||||||||||| ||    
T  4154302 cagagcaaccaaacaattgagagagacatcacacacttacccaaaatattaaggcaatgagtttatgggtc-tctcacttataaagtgttcaacctccac 4154400  T
Q  191 tttt 194  Q
    ||||    
T  4154401 tttt 4154404  T

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Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 40991902 - 40991787
Alignment:
Q  79 ccacattgggctcagagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtg 178  Q
    |||||||||||  |||||||| ||||| | |||   ||||  |||| || ||||||||| || || ||||  || |||||||||||||||| || |||||    
T  40991902 ccacattgggcctagagcaaccacacaggtgagttggacaccacatcttaacccaaaaccttgaggcattgggtttatgggtcctctcacttatgaagtg 40991803  T
Q  179 ttcaacctctactttt 194  Q
    ||||||||| ||||||    
T  40991802 ttcaacctccactttt 40991787  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 40518714 - 40518616
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||| |||||||| |||| ||| | ||| | ||||||||||| ||||| ||||  || |||||||||||| | | |||| ||||||||||| |||||||    
T  40518714 caaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttactttt 40518616  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 4154750 - 4154790
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||||| ||||| ||||||||||||||||| ||||||    
T  4154750 tatgggtcctttcacttataaagtgttcaacctccactttt 4154790  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 9483244 - 9483308
Alignment:
Q  127 ttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||||||| |||||||| |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  9483244 ttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttact 9483308  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 9620760 - 9620800
Alignment:
Q  154 tatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||||||||||||||| |||||||| ||||| |||||||||    
T  9620760 tatgggtcctctcacttataaagtgatcaacttctactttt 9620800  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 20995437 - 20995489
Alignment:
Q  91 cagagcaacaacacaagcgagagagacattacatttttacccaaaacattaag 143  Q
    ||||||||| ||||||| ||||||||||  ||||| ||||||||||| |||||    
T  20995437 cagagcaaccacacaagtgagagagacaccacattcttacccaaaaccttaag 20995489  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 10074026 - 10074115
Alignment:
Q  105 aagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||||||||||  ||| ||||||||||||| ||||| || |  || |||||||||||| ||| |||| ||||||||| | |||||||    
T  10074026 aagcgagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttactttt 10074115  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 10074389 - 10074487
Alignment:
Q  96 caacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    |||| |||| || ||||||||||  ||| | ||||||||||| ||||| || |  || |||||||||||| ||| |||| ||||||||||| |||||||    
T  10074389 caaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactttt 10074487  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 2579904 - 2579993
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||| |||||||||  ||||| ||||||||||| ||||| |  |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  2579904 cacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttact 2579993  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 3409385 - 3409296
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||| |||||||||  ||| | ||||||||||| ||||| || |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  3409385 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttact 3409296  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 26074748 - 26074649
Alignment:
Q  92 agagcaacaacacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    |||||||| |||| || ||||||||||  ||| | ||||||||||| ||||| || |  || |||||||||||| ||| |||| ||||||||||| ||||    
T  26074748 agagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttact 26074649  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 25328053 - 25327979
Alignment:
Q  110 agagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaac 184  Q
    |||||||||  ||| | ||||||||||| ||||| ||||| || |||||||||||| ||| |||| |||||||||    
T  25328053 agagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaac 25327979  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 194
Target Start/End: Complemental strand, 41632908 - 41632816
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 194  Q
    ||||||| |||||||||  ||| | ||||||||||  ||||  ||||  || |||||||||||| ||| |||| ||||||||||| |||||||    
T  41632908 cacaagcaagagagacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttactttt 41632816  T

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Target: scaffold0734 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 5523 - 5433
Alignment:
Q  102 cacaagcgagagagacattacatttttacccaaaa-cattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 191  Q
    ||||||| |||||||||  ||| | |||||||||| | |||||||| ||||| |||||| ||||| ||| |||| ||||||||||| ||||    
T  5523 cacaagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttact 5433  T

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