View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2183_high_16 (Length: 283)
Name: NF2183_high_16
Description: NF2183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2183_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 32626730 - 32626473
Alignment:
| Q |
9 |
gaagaatatattatgagttttggtttactacaggcagtgtatacatgcacattctcaaagtatatgtacttttcatttgaagatgtttttgtgtggaacc |
108 |
Q |
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| T |
32626730 |
gaagaatatattatgaattttggtttactacaggcagtgtatacatgcacattctcaaagtatatgtacttttcatttgaagatgtttttgtgtggaacc |
32626631 |
T |
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| Q |
109 |
gtgcattatcatttgaattaacaagatgtacgaaacaaatcctttacattcctcaaccaatataaatatagaatataaataaaagcattttcaaaatttg |
208 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
32626630 |
gtgtattatcatttgaattaacaagatgtacgaaacaaatcctttacattcctcaaccaatataaaaatagaatataaataaaagcattttcaaaatttg |
32626531 |
T |
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| Q |
209 |
cgattttaattgaatattttatacaccgaaatcatagtaatgaaaatgtaacacaaac |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32626530 |
cgattttaattgaatattttatacaccgaaatcatagtaatgaaaatgtaacacaaac |
32626473 |
T |
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