View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2183_low_13 (Length: 351)
Name: NF2183_low_13
Description: NF2183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2183_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 183 - 325
Target Start/End: Complemental strand, 32184508 - 32184370
Alignment:
| Q |
183 |
taacaccgactaatttccattgcaaaatttatccgtcataaaacaaggcaggcgagtgcttccatctcaactggattttctccacatgaaagatttagaa |
282 |
Q |
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| T |
32184508 |
taacaccgactaatttccattgcaaaatttatccgtcataaaacaaggc----gagtgcttccatctcaactggattttctccacatgaaggatttagaa |
32184413 |
T |
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| Q |
283 |
tcgaactcttgaccatttactgaaaatatgttattcctttgct |
325 |
Q |
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|||||||||||||||| |||| ||||||||||||||||||||| |
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| T |
32184412 |
tcgaactcttgaccatctacttaaaatatgttattcctttgct |
32184370 |
T |
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