View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2183_low_9 (Length: 372)
Name: NF2183_low_9
Description: NF2183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2183_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 13 - 354
Target Start/End: Complemental strand, 10859221 - 10858880
Alignment:
| Q |
13 |
gagatatcctgaaatttaactcccaacaacttgtgtgcattgatggtacctggacagaaagtttccatcttgtgacagttgattacaaacacgtgctcca |
112 |
Q |
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| T |
10859221 |
gagatatcctgaaatttaacttccaacaacttgtgtgcattgatggtacctggacagaaagtttccattttgtgacagttgattacaaacacgtgctcca |
10859122 |
T |
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| Q |
113 |
aggatggaaaacacagagtaaaattccctgaataaaagcacttgagttcatgtaaatctttaagatacaaagcctggagctcctcaaatattatcttttc |
212 |
Q |
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| T |
10859121 |
aggatggaaaacacagagtaaaattccctgaataaaagcacttgagttcatgtaaatctttaagatacaaagcctggagctcctcaaatattatcttttc |
10859022 |
T |
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| Q |
213 |
aacctcatccgatgcatcaccttcatgagatgcaaaactctccaaaattgttcctttgggatatgcattattctctgcaacaataaccatcagctcttca |
312 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10859021 |
aacctcatccgatgcatcaacttcatgagatgcaaaactctccaaaattgttcctttgggatatgcattattctctgcaacaataaccatcagctcttca |
10858922 |
T |
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| Q |
313 |
cagtgtttcacgtgtagatcttcaagtttcacaagatctttg |
354 |
Q |
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| T |
10858921 |
cagtgtttcacgtgtagatcttcaagtttcacaagatctttg |
10858880 |
T |
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