View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2184_high_14 (Length: 239)
Name: NF2184_high_14
Description: NF2184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2184_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 1768204 - 1768423
Alignment:
| Q |
1 |
atggactaatggtgcttactgcctagtagatacataccacaatattatttt-ttgttaatacacctcaatcattcttatttttcaattttatgataacat |
99 |
Q |
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| T |
1768204 |
atggactaatggtgcttactgcctagtagatacataccacaatattatttttttgttaatacacctcaatcattcttatttttcaattttatgataacat |
1768303 |
T |
|
| Q |
100 |
attcttattttacaatatgaatttaacactgttttctagtatggttgacttcccattttaaaatcttaaatatcataattttagaaggaaattttttaaa |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
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| T |
1768304 |
attcttattttacaatatgaatttaacactgttttctagtatgtttgacttcccattttaaaatcttaaatatcataattttagaaggaaaatttttaga |
1768403 |
T |
|
| Q |
200 |
ttagattatcgacattcata |
219 |
Q |
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|||||||||||||||||||| |
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| T |
1768404 |
ttagattatcgacattcata |
1768423 |
T |
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