View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2184_low_12 (Length: 242)
Name: NF2184_low_12
Description: NF2184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2184_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33969358 - 33969587
Alignment:
| Q |
1 |
tcttctgttgcttctgtggctccaccttctccggagttggaggatgacaatgtttcttatttcatcaaaaaggtaactaaggagattaaatttgtgtggt |
100 |
Q |
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| T |
33969358 |
tcttctgttgcttctgtggctccaccttctccggagttggaggatgacaatgtttcttatttcatcaaaaaggtaactaaggagattaaatttgtgtggt |
33969457 |
T |
|
| Q |
101 |
gcatgttaataatttatgttgcaacttgcaatttgcaatggtaattaggttttagttgaagttttaacagtggttttagtgttaatctgtttcnnnnnnn |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33969458 |
gcatgttaataatttatgttgcaacttgcaatttgcaatggtaattaggttttagttgaagttttaacagtggttttagtgttaatctgtttc-tttttt |
33969556 |
T |
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| Q |
201 |
ngtattttatattctggttcttgaatgatga |
231 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
33969557 |
tgtattttatattctggttcttgaatgatga |
33969587 |
T |
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