View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2184_low_3 (Length: 347)
Name: NF2184_low_3
Description: NF2184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2184_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 33969341 - 33969010
Alignment:
| Q |
1 |
attgaagatacaggacaaggtgaagcttcttcactaataacactgttctcttctgaaataaccacataaggagattcgaaatccaacatcaacttcttat |
100 |
Q |
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| T |
33969341 |
attgaagatacgggacaaggtgaagcttcttcactaataacactgttctcttctgaaataaccacataaggagattccaaatccaacatcaacttcttat |
33969242 |
T |
|
| Q |
101 |
ttccaaaacttcccttccttctatgccccatttcatttccattttcaccgtcaaccttaaaacttttaggcaaagacctcctcgccggcggcaaccggcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33969241 |
ttccaaaacttcccttccttctatgccccatttcatttccattttcaccatcaaccttaaaacttttaggcaaagacctcctcgccggcggcaaccggcc |
33969142 |
T |
|
| Q |
201 |
tctcgacgttggccttgctggcaatgccggcggtaggtctttaggcttctcctcttcgtctcgccgccgtagcgaatcaagcatctcttctaaagagctt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33969141 |
tctcgacgttggccttgctggcaatgccggcggtaggtctttaggcttctcctcttcgtctcgccgccgtagcgaatcaagcatctcttctaaagagctt |
33969042 |
T |
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| Q |
301 |
cttgcaatagaagatggtgaaggtgataacat |
332 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
33969041 |
cttgcaatagaagatggtgaaggtgataacat |
33969010 |
T |
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