View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2186_high_9 (Length: 234)
Name: NF2186_high_9
Description: NF2186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2186_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 8804791 - 8804995
Alignment:
| Q |
18 |
acggctaatattgagttagttctactagatcttaaccaatgtttcaataatattagccatgctcaacttgcaataattgtagtccgtattacctctaaaa |
117 |
Q |
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| T |
8804791 |
acggctaatattgagttagttctactagatcttaaccaatgtttcaataatattagccatattcaacttgcaatagttgtagtccgtattacctctaaaa |
8804890 |
T |
|
| Q |
118 |
gaaatattataatccatatttaaatacataagacgttttatc-aaaaataaaatgttattccttaccataaaggtctatgaaaacatattatttacataa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8804891 |
gaaatattataatccatatttaaatacataagacgttttatcaaaaaataaaatgttattccttaccataaaggtctatgaaaacatattatttacataa |
8804990 |
T |
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| Q |
217 |
aaatt |
221 |
Q |
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||||| |
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| T |
8804991 |
aaatt |
8804995 |
T |
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