View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2186_low_1 (Length: 420)
Name: NF2186_low_1
Description: NF2186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2186_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 15 - 412
Target Start/End: Original strand, 40553534 - 40553934
Alignment:
| Q |
15 |
ataatcatgtgttaatattagccttacagattgttgagttaatccttcagaagtttt---cagacaagttcataaagttgttaattgaggaaggtgtcta |
111 |
Q |
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| T |
40553534 |
ataatcatgtgttaatattagccttacagattgttgagttaatccttcagaagtttttttcagacaagttcataaagttgtttattgaggaaggtgtcta |
40553633 |
T |
|
| Q |
112 |
ttttgccataagtcactttcatcacctgggaaaacatcttcacgattgaatttccgtgaaaactctcattcaagagttgagtgtccatgttatgcatttt |
211 |
Q |
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| T |
40553634 |
ttttgccataagtcactttcatcacctgggaaaacatcttcacgattgaatttccgtgaaaactctcattcaagagttgagtgtccatgttatgcatttt |
40553733 |
T |
|
| Q |
212 |
cttatggcctatctcctgcatcttcaagtattcgaatttgcaaacttgacaaagattttatgtataatctttcaaagcacattaaagcaaaatatgtgga |
311 |
Q |
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| T |
40553734 |
cttatggcctatctcctgcatcttcaagtattcgaatttgcaaacttgacaaagattttatgtataatctttcaaagcacattaaagcaaaatatgtgga |
40553833 |
T |
|
| Q |
312 |
accaatatatgtttttaaagggtcgatgaacaatattccgttgaagcttggatatctttctgttgaattgtgtaaattggtgagcatttttgttgatgat |
411 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40553834 |
accaatatatgtttttaaagggtcgatgaacaatattccgctgaagctcggatatctttctgttgaattgtgtaaattggtgagcatttttgttgatgat |
40553933 |
T |
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| Q |
412 |
g |
412 |
Q |
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| T |
40553934 |
g |
40553934 |
T |
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