View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2187_low_5 (Length: 274)
Name: NF2187_low_5
Description: NF2187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2187_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 6582759 - 6582524
Alignment:
| Q |
24 |
gcaatagacctatagcagctacttaacaacactgattatgtgaggccgatgctccacattgagtagtatgcgtctacgagatgctcagtgaagtatttaa |
123 |
Q |
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| T |
6582759 |
gcaatagagctatagcagctatttaacaacact-attatgtgaggccgatgctccacattgagtagtatgcgtctacgagatgctcagtgaagtatttaa |
6582661 |
T |
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| Q |
124 |
gtggcttaattttttctcctttgtagctagcttttagaaaagagttctccaaatgtttagatacttattagattcctttagtttcacatccacacaaaag |
223 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
6582660 |
gtggcttaatttcttctcctttgtagctagcttttagaaaagagttctccaaatgtttagatacttattagattcttttagtttcacatccacacaaaag |
6582561 |
T |
|
| Q |
224 |
taataaatggatttttatttcaacgggcattttgtat |
260 |
Q |
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||||||||||||||||||||||||||||||| ||||| |
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| T |
6582560 |
taataaatggatttttatttcaacgggcattatgtat |
6582524 |
T |
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