View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2190_low_5 (Length: 267)

Name: NF2190_low_5
Description: NF2190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2190_low_5
NF2190_low_5
[»] chr6 (19 HSPs)
chr6 (185-253)||(23291084-23291152)
chr6 (186-253)||(6127273-6127340)
chr6 (187-253)||(33695327-33695393)
chr6 (187-253)||(33696695-33696761)
chr6 (188-253)||(17705465-17705530)
chr6 (186-253)||(18365573-18365640)
chr6 (186-253)||(18370837-18370904)
chr6 (186-253)||(28675146-28675213)
chr6 (188-253)||(6031741-6031806)
chr6 (188-253)||(17176021-17176086)
chr6 (187-252)||(18889698-18889762)
chr6 (188-253)||(25986930-25986995)
chr6 (191-253)||(8515725-8515787)
chr6 (192-252)||(29693652-29693712)
chr6 (186-253)||(2309423-2309490)
chr6 (194-253)||(11548588-11548647)
chr6 (199-253)||(32702216-32702270)
chr6 (186-253)||(9752245-9752311)
chr6 (192-253)||(33696903-33696963)
[»] chr5 (26 HSPs)
chr5 (181-253)||(2477629-2477701)
chr5 (188-253)||(11361131-11361196)
chr5 (186-253)||(4892200-4892267)
chr5 (183-253)||(25398233-25398303)
chr5 (188-253)||(37321793-37321859)
chr5 (188-253)||(33584329-33584394)
chr5 (186-253)||(6043511-6043578)
chr5 (187-251)||(3362777-3362841)
chr5 (187-251)||(38899728-38899792)
chr5 (186-253)||(8145373-8145440)
chr5 (186-253)||(14138666-14138733)
chr5 (188-253)||(22913054-22913119)
chr5 (188-251)||(12850801-12850864)
chr5 (188-253)||(3522006-3522071)
chr5 (188-253)||(4434007-4434072)
chr5 (188-253)||(17545685-17545750)
chr5 (192-243)||(27481830-27481881)
chr5 (188-253)||(12614733-12614798)
chr5 (187-225)||(13664641-13664679)
chr5 (192-253)||(3521806-3521866)
chr5 (192-253)||(6043311-6043371)
chr5 (200-253)||(10458409-10458462)
chr5 (192-253)||(4892408-4892468)
chr5 (192-253)||(12614536-12614597)
chr5 (192-253)||(14138873-14138933)
chr5 (192-253)||(33584128-33584188)
[»] chr4 (37 HSPs)
chr4 (181-253)||(50156578-50156650)
chr4 (189-253)||(7745112-7745176)
chr4 (186-253)||(10442789-10442856)
chr4 (179-253)||(24128230-24128304)
chr4 (187-253)||(31078819-31078885)
chr4 (179-253)||(49387888-49387962)
chr4 (188-253)||(22199261-22199326)
chr4 (186-253)||(21802322-21802389)
chr4 (186-253)||(23964465-23964532)
chr4 (188-251)||(36072947-36073010)
chr4 (186-253)||(47290064-47290131)
chr4 (187-253)||(33530688-33530754)
chr4 (188-253)||(2624837-2624902)
chr4 (187-251)||(4751445-4751509)
chr4 (186-253)||(24392665-24392732)
chr4 (186-253)||(36073348-36073415)
chr4 (186-253)||(44893424-44893491)
chr4 (187-253)||(44893213-44893280)
chr4 (187-253)||(53123029-53123096)
chr4 (179-253)||(46441835-46441909)
chr4 (194-253)||(42671675-42671734)
chr4 (187-250)||(37934944-37935007)
chr4 (200-253)||(37219837-37219890)
chr4 (192-252)||(17655637-17655697)
chr4 (216-253)||(9088898-9088935)
chr4 (192-253)||(25063373-25063434)
chr4 (192-253)||(44893012-44893072)
chr4 (192-253)||(44893632-44893692)
chr4 (198-253)||(44744445-44744500)
chr4 (192-253)||(9089076-9089136)
chr4 (220-253)||(17655462-17655495)
chr4 (192-253)||(36073555-36073615)
chr4 (192-253)||(46442050-46442110)
chr4 (192-253)||(53123237-53123297)
chr4 (192-252)||(24128446-24128505)
chr4 (192-252)||(36073260-36073320)
chr4 (205-253)||(36073743-36073791)
[»] chr3 (38 HSPs)
chr3 (186-253)||(2754715-2754782)
chr3 (186-253)||(3574527-3574594)
chr3 (186-252)||(11347266-11347332)
chr3 (188-253)||(19650900-19650965)
chr3 (188-253)||(37217053-37217118)
chr3 (187-253)||(22426344-22426410)
chr3 (188-253)||(3456064-3456129)
chr3 (188-253)||(48160905-48160970)
chr3 (187-253)||(36865027-36865093)
chr3 (188-253)||(6041884-6041949)
chr3 (186-253)||(3137414-3137481)
chr3 (186-253)||(33113791-33113858)
chr3 (186-253)||(37522051-37522118)
chr3 (187-242)||(42297352-42297407)
chr3 (188-253)||(8320584-8320649)
chr3 (188-253)||(30385011-30385076)
chr3 (188-253)||(33145713-33145777)
chr3 (186-253)||(33839529-33839596)
chr3 (186-253)||(34482910-34482977)
chr3 (189-253)||(9797029-9797093)
chr3 (186-253)||(24343545-24343612)
chr3 (188-249)||(41224233-41224294)
chr3 (199-242)||(42921154-42921197)
chr3 (192-245)||(42921339-42921392)
chr3 (188-253)||(8362045-8362110)
chr3 (192-253)||(37522259-37522319)
chr3 (187-251)||(26612784-26612848)
chr3 (78-130)||(33590378-33590430)
chr3 (78-130)||(33597550-33597602)
chr3 (200-252)||(47738117-47738169)
chr3 (191-225)||(40327878-40327912)
chr3 (192-253)||(3137213-3137273)
chr3 (192-253)||(34482687-34482747)
chr3 (192-253)||(40328037-40328098)
chr3 (216-253)||(41883223-41883260)
chr3 (186-219)||(47402630-47402663)
chr3 (200-253)||(47738317-47738370)
chr3 (197-253)||(33839741-33839797)
[»] chr2 (21 HSPs)
chr2 (187-253)||(35160756-35160822)
chr2 (189-253)||(10661888-10661952)
chr2 (186-253)||(9293576-9293643)
chr2 (186-253)||(23268062-23268129)
chr2 (188-253)||(21936081-21936146)
chr2 (188-253)||(33380207-33380272)
chr2 (186-252)||(13354844-13354910)
chr2 (188-253)||(9723405-9723470)
chr2 (186-253)||(31174834-31174901)
chr2 (186-253)||(43330910-43330977)
chr2 (187-253)||(7475508-7475574)
chr2 (187-253)||(14941366-14941432)
chr2 (190-253)||(21393688-21393751)
chr2 (186-253)||(27847630-27847697)
chr2 (216-253)||(3989104-3989141)
chr2 (192-253)||(23267861-23267921)
chr2 (200-253)||(9723612-9723665)
chr2 (200-253)||(22591494-22591547)
chr2 (192-253)||(22592918-22592979)
chr2 (192-253)||(33380413-33380473)
chr2 (192-253)||(35160965-35161025)
[»] chr8 (38 HSPs)
chr8 (188-253)||(32393858-32393923)
chr8 (186-253)||(1645965-1646032)
chr8 (186-253)||(26042116-26042183)
chr8 (186-253)||(32064743-32064810)
chr8 (188-253)||(34665382-34665447)
chr8 (188-253)||(35353041-35353106)
chr8 (189-253)||(14128865-14128929)
chr8 (186-253)||(17841850-17841917)
chr8 (186-253)||(37986055-37986122)
chr8 (186-253)||(40780129-40780196)
chr8 (186-253)||(42755042-42755109)
chr8 (186-252)||(15187558-15187624)
chr8 (184-253)||(6108233-6108302)
chr8 (188-253)||(20091801-20091866)
chr8 (188-253)||(24211553-24211618)
chr8 (188-253)||(37132658-37132723)
chr8 (196-253)||(38016979-38017036)
chr8 (186-253)||(31347782-31347849)
chr8 (186-253)||(39772801-39772868)
chr8 (187-253)||(41819778-41819844)
chr8 (186-253)||(7017865-7017932)
chr8 (191-253)||(8453837-8453899)
chr8 (189-253)||(27782117-27782181)
chr8 (188-253)||(30835047-30835111)
chr8 (193-253)||(25581239-25581299)
chr8 (198-253)||(7021988-7022043)
chr8 (192-253)||(3890413-3890474)
chr8 (188-253)||(27835453-27835518)
chr8 (192-253)||(1503642-1503702)
chr8 (192-253)||(3596840-3596900)
chr8 (216-253)||(3890616-3890653)
chr8 (192-253)||(17841649-17841709)
chr8 (181-242)||(24844869-24844930)
chr8 (192-253)||(26041912-26041972)
chr8 (192-253)||(32064952-32065012)
chr8 (192-253)||(40779928-40779988)
chr8 (192-253)||(42754841-42754901)
chr8 (216-252)||(3597042-3597078)
[»] chr1 (23 HSPs)
chr1 (185-253)||(25463673-25463741)
chr1 (186-253)||(18404440-18404507)
chr1 (188-253)||(40214988-40215053)
chr1 (181-253)||(16045798-16045870)
chr1 (186-253)||(3559615-3559682)
chr1 (187-253)||(41876442-41876508)
chr1 (188-253)||(6883487-6883552)
chr1 (188-253)||(9910293-9910358)
chr1 (188-253)||(44094698-44094763)
chr1 (186-253)||(19015402-19015469)
chr1 (188-253)||(36966708-36966773)
chr1 (188-253)||(37821834-37821899)
chr1 (186-253)||(25973412-25973478)
chr1 (188-251)||(32000269-32000332)
chr1 (186-253)||(40273700-40273767)
chr1 (186-253)||(27523255-27523324)
chr1 (187-225)||(34519757-34519795)
chr1 (211-253)||(44690839-44690881)
chr1 (187-225)||(51620979-51621017)
chr1 (192-253)||(18404654-18404714)
chr1 (192-253)||(19015610-19015670)
chr1 (192-253)||(51737711-51737771)
chr1 (188-252)||(44691030-44691094)
[»] scaffold0204 (2 HSPs)
scaffold0204 (186-253)||(4394-4461)
scaffold0204 (192-253)||(4602-4662)
[»] chr7 (22 HSPs)
chr7 (188-251)||(24394972-24395035)
chr7 (186-253)||(45637710-45637777)
chr7 (187-253)||(15577850-15577916)
chr7 (187-253)||(35444557-35444623)
chr7 (188-253)||(3961979-3962044)
chr7 (188-253)||(4974735-4974800)
chr7 (188-253)||(34482835-34482900)
chr7 (188-253)||(42611811-42611876)
chr7 (185-253)||(15329270-15329338)
chr7 (186-253)||(37477080-37477147)
chr7 (188-253)||(25167850-25167915)
chr7 (188-253)||(48880927-48880992)
chr7 (187-253)||(18036977-18037043)
chr7 (191-252)||(36790467-36790528)
chr7 (192-253)||(29737143-29737204)
chr7 (188-253)||(15238382-15238447)
chr7 (188-241)||(20010109-20010162)
chr7 (186-253)||(42696081-42696148)
chr7 (216-253)||(30848597-30848634)
chr7 (192-253)||(25167655-25167715)
chr7 (192-253)||(45637917-45637977)
chr7 (192-253)||(48880726-48880786)
[»] scaffold0471 (2 HSPs)
scaffold0471 (179-253)||(12833-12907)
scaffold0471 (192-252)||(13049-13108)
[»] scaffold0665 (1 HSPs)
scaffold0665 (189-253)||(3069-3133)
[»] scaffold0096 (1 HSPs)
scaffold0096 (186-253)||(41009-41076)
[»] scaffold0178 (2 HSPs)
scaffold0178 (188-253)||(11621-11686)
scaffold0178 (200-253)||(11827-11879)
[»] scaffold0085 (1 HSPs)
scaffold0085 (188-253)||(47850-47915)
[»] scaffold0228 (5 HSPs)
scaffold0228 (199-253)||(8413-8467)
scaffold0228 (199-253)||(15995-16049)
scaffold0228 (199-253)||(25947-26001)
scaffold0228 (192-253)||(16190-16250)
scaffold0228 (192-253)||(26142-26202)


Alignment Details
Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 23291152 - 23291084
Alignment:
Q  185 gaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23291152 gaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 6127273 - 6127340
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6127273 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 33695393 - 33695327
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33695393 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 33696695 - 33696761
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33696695 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17705530 - 17705465
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 18365640 - 18365573
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18365640 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 18370904 - 18370837
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18370904 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 28675146 - 28675213
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  28675146 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 6031806 - 6031741
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  6031806 gagcaatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17176086 - 17176021
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 18889762 - 18889698
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18889762 agagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25986930 - 25986995
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  25986930 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 8515787 - 8515725
Alignment:
Q  191 caatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    ||||||| |||| ||||| |||||||||||||||  |||||||||||||||||||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 2309490 - 2309423
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| ||||||||||||||||| |   ||||||||||| |||||||||||||||    
T  2309490 aagagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 11548647 - 11548588
Alignment:
Q  194 tgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| |||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 32702216 - 32702270
Alignment:
Q  199 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| |||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 9752311 - 9752245
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| |||||| | || |||||||||| || |||||||| ||||||||||||||    
T  9752311 aagagcaatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 33696963 - 33696903
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  33696963 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 33696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 2477629 - 2477701
Alignment:
Q  181 aaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2477629 aaataaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 11361196 - 11361131
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361196 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 4892200 - 4892267
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4892200 aagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 25398233 - 25398303
Alignment:
Q  183 atgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25398233 atgacgagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37321859 - 37321793
Alignment:
Q  188 gagcaatgctatatat-taagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321859 gagcaatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 33584394 - 33584329
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33584394 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 6043578 - 6043511
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  6043578 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 3362777 - 3362841
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  3362777 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 38899792 - 38899728
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  38899792 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 8145373 - 8145440
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8145373 aagaggaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 14138666 - 14138733
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14138666 aagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 22913119 - 22913054
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 12850801 - 12850864
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    |||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 3522071 - 3522006
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||| ||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 4434072 - 4434007
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| | |||||||||| |||||||| ||||||||||||||    
T  4434072 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17545750 - 17545685
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  17545750 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 27481830 - 27481881
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatgg 243  Q
    |||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatgg 27481881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 12614798 - 12614733
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||| ||||||||||||||  || |||||||||||| || |||||||    
T  12614798 gagcaatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 13664641 - 13664679
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaa 225  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  13664641 agagcaatgttatatattaagaaagattttatcaagaaa 13664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 3521806 - 3521866
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 6043311 - 6043371
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  200 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| |||||| ||||||||||||||| || ||||||||||||||| |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 12614536 - 12614597
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||| | ||||||||||| |||  |||||||||||||||||| |||||||    
T  12614536 aatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatc 12614597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 14138933 - 14138873
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  14138933 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 14138873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 50156650 - 50156578
Alignment:
Q  181 aaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50156650 aaatcaagagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 7745176 - 7745112
Alignment:
Q  189 agcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 10442856 - 10442789
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10442856 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 24128230 - 24128304
Alignment:
Q  179 ttaaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24128230 ttaaataaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 31078885 - 31078819
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31078885 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 49387962 - 49387888
Alignment:
Q  179 ttaaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49387962 ttaaaagatgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 22199261 - 22199326
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 21802389 - 21802322
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  21802389 aagagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 23964532 - 23964465
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23964532 aagagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 36072947 - 36073010
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  36072947 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 47290064 - 47290131
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  47290064 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 33530754 - 33530688
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  33530754 agagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 2624837 - 2624902
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 4751445 - 4751509
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  4751445 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 24392665 - 24392732
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  24392665 aagagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 36073348 - 36073415
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36073348 aagaggaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 44893424 - 44893491
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  44893424 aagagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 44893280 - 44893213
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatc-aagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||    
T  44893280 agagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 53123029 - 53123096
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaa-gaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  53123029 agagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 46441835 - 46441909
Alignment:
Q  179 ttaaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||| | |||||||||||||||| |||||||||||| | |||||||||| ||||||||||||||| |||||||    
T  46441835 ttaaattatgagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  194 tgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| || |||||||||||||| |||| ||||||||||||||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 37935007 - 37934944
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaata 250  Q
    ||||||||||||||||| || |||||||||||||| ||||| | ||||||||||||| ||||||    
T  37935007 agagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaata 37934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  200 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 17655697 - 17655637
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||| || ||||||    
T  17655697 aatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataat 17655637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  216 tatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||||||||||  || ||||||||||||| |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 44893012 - 44893072
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 44893692 - 44893632
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 44744445 - 44744500
Alignment:
Q  198 atatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| ||||||||||||||| ||||||  ||||| |||||||||| |||||||||    
T  44744445 atataataagaaagattttattaagaaatatttaaaaatgacatggtagaataatc 44744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 9089136 - 9089076
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 17655462 - 17655495
Alignment:
Q  220 aagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| |||||||||||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 24128505 - 24128446
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  24128505 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 24128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 36073260 - 36073320
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    ||||||| ||| ||| || |||||||||||||||  ||||||||||| ||| |||||||||    
T  36073260 aatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataat 36073320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 36073791 - 36073743
Alignment:
Q  205 aagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||| ||||||  ||||||||||||||| || |||||||    
T  36073791 aagaaagattttatgaagaaagatttaagaatgacatgacaaaataatc 36073743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 2754715 - 2754782
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754715 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 3574594 - 3574527
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574594 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 11347266 - 11347332
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11347266 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 19650965 - 19650900
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19650965 gagcaatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37217118 - 37217053
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 22426410 - 22426344
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22426410 agagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3456064 - 3456129
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 48160905 - 48160970
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 36865093 - 36865027
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  36865093 agagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6041884 - 6041949
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 3137481 - 3137414
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  3137481 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 33113791 - 33113858
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  33113791 aagagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 37522051 - 37522118
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  37522051 aagagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 42297352 - 42297407
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatg 242  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42297352 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatg 42297407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 8320649 - 8320584
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  8320649 gagcaatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 30385011 - 30385076
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 33145713 - 33145777
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  33145713 gagcaatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 33839529 - 33839596
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||    
T  33839529 aagagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 34482977 - 34482910
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||| |||| |||||||||    
T  34482977 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 9797093 - 9797029
Alignment:
Q  189 agcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| ||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 24343545 - 24343612
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||||||||||||||||||||||||| || || | | | ||||||||||||||    
T  24343545 aagagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 41224233 - 41224294
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaat 249  Q
    ||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| |||||    
T  41224233 gagcactgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaat 41224294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 42921154 - 42921197
Alignment:
Q  199 tatattaagaaagattttatcaagaaaattttaagaatgacatg 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatg 42921197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 42921392 - 42921339
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggca 245  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||||||    
T  42921392 aatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggca 42921339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 8362110 - 8362045
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||| |   | ||||||||| || |||||||||||||||||||||||    
T  8362110 gagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 37522319 - 37522259
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 26612784 - 26612848
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    ||||||||  ||||||| || ||||||||||| || |||| || |||||||||||||||||||||    
T  26612784 agagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 33590430 - 33590378
Alignment:
Q  78 atagaaagtcatttatatagttgacatatgcctaataaattcacattaacata 130  Q
    |||||||| |||| |||| |||||||| |||||||||||| ||||||||||||    
T  33590430 atagaaaggcattcatatcgttgacatttgcctaataaatacacattaacata 33590378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 33597602 - 33597550
Alignment:
Q  78 atagaaagtcatttatatagttgacatatgcctaataaattcacattaacata 130  Q
    |||||||| |||| |||| |||||||| |||||||||||| ||||||||||||    
T  33597602 atagaaaggcattcatatcgttgacatttgcctaataaatacacattaacata 33597550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  200 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    |||| |||||||||||||||||||||  || |||||||| |||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 225
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  191 caatgctatatattaagaaagattttatcaagaaa 225  Q
    ||||||||||||| |||||||||||||||||||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||||||||||  || |||||||||||| || |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  216 tatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||| || |||||||||||||||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 47402663 - 47402630
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatc 219  Q
    |||||||||||||||||| |||||||||||||||    
T  47402663 aagagcaatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  200 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||| |||||||||||||||  || ||||||||||||||| |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  197 tatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| ||||| |||||||||||||||  || |||||||||||| || |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 35160756 - 35160822
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160756 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 10661888 - 10661952
Alignment:
Q  189 agcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 9293643 - 9293576
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9293643 aagagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 23268129 - 23268062
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  23268129 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 21936081 - 21936146
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 33380207 - 33380272
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  33380207 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 13354844 - 13354910
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  13354844 aagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 9723405 - 9723470
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  9723405 gagcaatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 31174901 - 31174834
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  31174901 aagaacaatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 43330910 - 43330977
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||| |||| || |||||||||||||||||||||||    
T  43330910 aagagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 7475574 - 7475508
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  7475574 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 14941432 - 14941366
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| |||||||||||||| ||||||  || |||||||||||||||||||||||    
T  14941432 agagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 21393751 - 21393688
Alignment:
Q  190 gcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  21393751 gcaatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 27847630 - 27847697
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||| ||||| |||||||||||||| ||||||  || |||||||||||| ||||||||||    
T  27847630 aagagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  216 tatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 23267861 - 23267921
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 9723665 - 9723612
Alignment:
Q  200 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||| ||||| |||||||||  ||||||||||||||| ||||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatc 9723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  200 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| |||||||||||||| || |||| || |||||||| ||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||||||||||  || |||||||||||| || |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 32393858 - 32393923
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 1646032 - 1645965
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1646032 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 26042183 - 26042116
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  26042183 aagagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 32064743 - 32064810
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32064743 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 34665382 - 34665447
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34665382 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 35353041 - 35353106
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 14128865 - 14128929
Alignment:
Q  189 agcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 17841917 - 17841850
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  17841917 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 37986122 - 37986055
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37986122 aagagtaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 40780196 - 40780129
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40780196 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 42755109 - 42755042
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42755109 aagagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 15187558 - 15187624
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  15187558 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 6108302 - 6108233
Alignment:
Q  184 tgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  6108302 tgaagagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 20091866 - 20091801
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20091866 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 24211618 - 24211553
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  24211618 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37132723 - 37132658
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  37132723 gagcaatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 38016979 - 38017036
Alignment:
Q  196 ctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 31347849 - 31347782
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  31347849 aagagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 39772868 - 39772801
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  39772868 aagagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 41819844 - 41819778
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||| ||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  41819844 agagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 7017932 - 7017865
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| | |||||||||| | ||||||| || |||||||||||||||||||||||    
T  7017932 aagagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 8453837 - 8453899
Alignment:
Q  191 caatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||||||| || |||||||    
T  8453837 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 27782181 - 27782117
Alignment:
Q  189 agcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||| |||||| ||||||||||||||  || || ||||||||||||||||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 30835111 - 30835047
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||| ||||||| ||||||||||||||| | |||| || |||||||||||||||||||||||    
T  30835111 gagcaatgttatatatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  193 atgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||| ||||||| |||||  |||||||||| ||||||||||||||| |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  198 atatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||| |||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||||||||||  || |||||||| ||||||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 27835518 - 27835453
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| || |||||| |||| ||||||| || ||||||||||||| | |||||||    
T  27835518 gagcaatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatc 27835453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 3596840 - 3596900
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  3596840 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 3596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  216 tatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||| || |||||||||||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 24844930 - 24844869
Alignment:
Q  181 aaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatg 242  Q
    |||| ||||| ||||||| |||| |||||| ||||||| ||||||| || ||||||||||||    
T  24844930 aaataaagagaaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatg 24844869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 32065012 - 32064952
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  32065012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatc 32064952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 42754841 - 42754901
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  42754841 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatc 42754901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  216 tatcaagaaaattttaagaatgacatggcagaataat 252  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 25463673 - 25463741
Alignment:
Q  185 gaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25463673 gaagagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 18404440 - 18404507
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18404440 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 40214988 - 40215053
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40214988 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 16045870 - 16045798
Alignment:
Q  181 aaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16045870 aaataaagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 3559615 - 3559682
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3559615 aagaacaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 41876508 - 41876442
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  41876508 agagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6883487 - 6883552
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  6883487 gagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 9910358 - 9910293
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 44094698 - 44094763
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44094698 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 19015402 - 19015469
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  19015402 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 36966773 - 36966708
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37821899 - 37821834
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 25973412 - 25973478
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| |||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  25973412 aagagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 32000332 - 32000269
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    |||||||||||||||| |||||||||||| ||||||||| || |||||||||||| ||||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 40273700 - 40273767
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||| |||| |||||||||||| ||||||||| || |||||||||||| || |||||||    
T  40273700 aagagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 27523324 - 27523255
Alignment:
Q  186 aagagcaatgctatata--ttaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||  | |||||  ||||||||||||||| ||||||||||||||| ||||||||||    
T  27523324 aagagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 34519757 - 34519795
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaa 225  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  34519757 agagcaatgctatatatcaagaaagattttattaagaaa 34519795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 44690839 - 44690881
Alignment:
Q  211 gattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||  || |||||||||||||||||||||||    
T  44690839 gattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 51620979 - 51621017
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaa 225  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  51620979 agagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 18404714 - 18404654
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  18404714 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 18404654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 44691094 - 44691030
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    |||||||| | ||||| |||||||||||||| || |||  || |||||| |||||||||||||||    
T  44691094 gagcaatgttgtatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 4394 - 4461
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4394 aagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 4662 - 4602
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  4662 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 4602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 24394972 - 24395035
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 251  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 45637710 - 45637777
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45637710 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 15577916 - 15577850
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15577916 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 35444557 - 35444623
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  35444557 agagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3961979 - 3962044
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 4974800 - 4974735
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4974800 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 34482835 - 34482900
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 42611811 - 42611876
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42611811 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 15329270 - 15329338
Alignment:
Q  185 gaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15329270 gaagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

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Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 37477147 - 37477080
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  37477147 aagagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 25167915 - 25167850
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  25167915 gagcaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

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Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 48880992 - 48880927
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  48880992 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 18036977 - 18037043
Alignment:
Q  187 agagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  18036977 agagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

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Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 36790528 - 36790467
Alignment:
Q  191 caatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  36790528 caatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 29737143 - 29737204
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 15238382 - 15238447
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| |||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  15238382 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 20010162 - 20010109
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacat 241  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat 20010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 42696081 - 42696148
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||| ||||||| |||||||||||||| || ||  ||||||||||||||| |||||||||||    
T  42696081 aagagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

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Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  216 tatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 45637977 - 45637917
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  45637977 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 45637917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

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Target: scaffold0471 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 12833 - 12907
Alignment:
Q  179 ttaaatgaagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  12833 ttaaataaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 13108 - 13049
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 252  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  13108 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 13049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 3069 - 3133
Alignment:
Q  189 agcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3069 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 41009 - 41076
Alignment:
Q  186 aagagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41009 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 11621 - 11686
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  11621 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 11879 - 11827
Alignment:
Q  200 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  11879 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 11827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 47850 - 47915
Alignment:
Q  188 gagcaatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47850 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 47; Significance: 7e-18; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  199 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  199 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  199 tatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  192 aatgctatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 253  Q
    ||||||| |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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