View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2191_high_9 (Length: 273)
Name: NF2191_high_9
Description: NF2191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2191_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 42072203 - 42072446
Alignment:
| Q |
19 |
caaggagtgtattagtccgcaaattgtaaaacttgcaatttatcagtgacattattgatttcattgttatagtttaatgtaattctacccaactgattcg |
118 |
Q |
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| T |
42072203 |
caaggagtgtattagtccgcaaattgtaaaacttgcaatttatcagtgacattattgatttcattgttatagtttaatgtaattctacccaactgattcg |
42072302 |
T |
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| Q |
119 |
tgttcgcaacataaaataaaattaaaactcgtgcttaagtgcttaattgactgaccaagaactccagggcctccatggtcggagtaatatataaatatcc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
42072303 |
tgttcgcaacataaaataaaattaaaactcgtgcttaagtgcttaattgactgaccaagaactccagggcctccatggtcggagtaatatatgaatatcc |
42072402 |
T |
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| Q |
219 |
tatcttcggatttgctgttgacgaccttgccacttccacccttt |
262 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
42072403 |
tatcttcggatttgctgttgatgaccttgccacttccacccttt |
42072446 |
T |
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