View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2193_low_5 (Length: 221)
Name: NF2193_low_5
Description: NF2193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2193_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 17525896 - 17526079
Alignment:
| Q |
1 |
acttttcatataattaactttatacaacttaatttttaatagtttgtttgatgttcctggcaagtatcgaagtttctaacttctatttatagtttaaatt |
100 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
17525896 |
acttttgatataattaactttatacaacttaatttttaatagtttgtttgatgttcctggcaagtatcgaagtttctaacttctattaatagtttaaatt |
17525995 |
T |
|
| Q |
101 |
cgtgttttcgtggaaagattaaaattac-aaaaaataactggcttagaaatactaaaatttcgtgacatatttggagaattttg |
183 |
Q |
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|| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
17525996 |
cgggttttcgtggaaagattaaaattacaaaaaaataactggcttagaaatattaaaatttcgtgacatatttggagaattttg |
17526079 |
T |
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