View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2194_high_21 (Length: 240)
Name: NF2194_high_21
Description: NF2194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2194_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 38612917 - 38612694
Alignment:
| Q |
1 |
atgccttagatcagaaatgtcgatgcaacaaaggggctaacactaactaaatttgttttcgagagaagcgtcaaaagataaattgcacagataatcacga |
100 |
Q |
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| T |
38612917 |
atgccttagatcagaaatgtcgatgctacaaaggggctaacactaactaaatttgttttcgagagaaacatcaaaagataaattgcacagataatcacga |
38612818 |
T |
|
| Q |
101 |
ctcccatatttgcaaaactgaagttagtaaacaattgcaacattaataggtcaaaaaacaagaaatcataaagaaacacacaagctactcttccattgta |
200 |
Q |
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| T |
38612817 |
ctaccatatttgcaaaactgaagttagtaaacaattgcaacattaataggtcaaaaaacaagaaatcataaagaaacacacaagctactcttccattgta |
38612718 |
T |
|
| Q |
201 |
gatcataattgaatacctcaattt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
38612717 |
gatcataattgaatacctcaattt |
38612694 |
T |
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