View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2194_low_29 (Length: 216)
Name: NF2194_low_29
Description: NF2194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2194_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 13271064 - 13271248
Alignment:
| Q |
18 |
ttaatgaaggatttaaaaatggttagaagaaa-ctttaaagccacgagttgaagcaaaggcttaacctcaatagttaggtgtttgcgtgaagcaagcatg |
116 |
Q |
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| T |
13271064 |
ttaatgaaggatttaaaaatggttagaagaaaactttaaagccacgagttgaagcaaaggcttaacctcaatagttaggtgtttgcgtgaagcaagcatg |
13271163 |
T |
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| Q |
117 |
aaataagctctctcttagttagcactatttctctctcaacacattttgttcttgatcttttgccttattccattcatcatcctttg |
202 |
Q |
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| T |
13271164 |
aaataagctctctcttagttagcactatttctctctcaacacattttgttcttgatcttttgccttatt-cattcatcatcctttg |
13271248 |
T |
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