View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2195_high_7 (Length: 247)
Name: NF2195_high_7
Description: NF2195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2195_high_7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 35827503 - 35827258
Alignment:
| Q |
10 |
aaaggcgattaaaatacatgggtcaagagattaatttaaagtagttttttcattttagtaaattcaaattgcgattgtcagtttctagttaggcatgata |
109 |
Q |
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| T |
35827503 |
aaaggcgattaaaatacatgggtcaagagattaatttaaagtagttttttcattttagtaaattcaaattgcgattgtcagtttctagttaggcatgata |
35827404 |
T |
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| Q |
110 |
gttggtaatgtcatgaaaatttccacgaaaatataaaactatgaacaagagaatatgttgacaaaatgataccatgttccatcataacaaactacattat |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35827403 |
gttggtaatgtcatgaaaatttccacgaaaatataaaactatgaacaagagaatatgttgacaaaatgataccatgttccatcataacaaactacattat |
35827304 |
T |
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| Q |
210 |
ccaacgtg--------caatgagaacaatctgaatccaatcttagt |
247 |
Q |
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|||||||| |||||||||||||||||||||||||||||| |
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| T |
35827303 |
ccaacgtgcaagaaaccaatgagaacaatctgaatccaatcttagt |
35827258 |
T |
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