View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2196_low_2 (Length: 517)

Name: NF2196_low_2
Description: NF2196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2196_low_2
NF2196_low_2
[»] chr7 (47 HSPs)
chr7 (226-502)||(1072090-1072358)
chr7 (85-502)||(7954828-7955256)
chr7 (12-240)||(1072371-1072598)
chr7 (183-328)||(3953046-3953191)
chr7 (183-331)||(30259070-30259218)
chr7 (183-331)||(31231618-31231768)
chr7 (183-328)||(24836042-24836187)
chr7 (183-333)||(34052296-34052446)
chr7 (187-331)||(30594712-30594856)
chr7 (225-331)||(10936516-10936622)
chr7 (210-331)||(45997539-45997660)
chr7 (198-331)||(12142211-12142345)
chr7 (183-327)||(29277861-29278004)
chr7 (242-331)||(38883240-38883331)
chr7 (183-331)||(20184242-20184391)
chr7 (210-328)||(37093790-37093908)
chr7 (183-327)||(39617845-39617990)
chr7 (210-327)||(9285745-9285862)
chr7 (210-327)||(9289812-9289929)
chr7 (183-331)||(35339282-35339430)
chr7 (225-319)||(40358146-40358240)
chr7 (253-331)||(38528482-38528564)
chr7 (182-281)||(10398390-10398487)
chr7 (244-328)||(25742494-25742580)
chr7 (261-331)||(35665696-35665768)
chr7 (210-328)||(48103390-48103505)
chr7 (183-320)||(24123759-24123898)
chr7 (109-164)||(25705361-25705416)
chr7 (201-319)||(33749674-33749793)
chr7 (297-331)||(31231633-31231667)
chr7 (244-325)||(47237488-47237574)
chr7 (242-320)||(16876517-16876597)
chr7 (182-222)||(33355166-33355206)
chr7 (293-333)||(40596799-40596839)
chr7 (11-46)||(7955328-7955363)
chr7 (210-309)||(31521556-31521655)
chr7 (293-328)||(35665655-35665690)
chr7 (292-331)||(38883334-38883373)
chr7 (297-331)||(24836138-24836172)
chr7 (297-331)||(35339297-35339331)
chr7 (293-331)||(38528409-38528447)
chr7 (201-282)||(38989093-38989172)
chr7 (297-327)||(48103483-48103513)
chr7 (298-331)||(33721846-33721879)
chr7 (210-327)||(39143743-39143854)
chr7 (297-333)||(10398437-10398473)
chr7 (443-491)||(20331425-20331473)
[»] chr1 (48 HSPs)
chr1 (183-331)||(50162542-50162691)
chr1 (183-331)||(19954915-19955063)
chr1 (183-331)||(2854536-2854684)
chr1 (183-331)||(5189488-5189636)
chr1 (183-331)||(23698506-23698654)
chr1 (183-327)||(27240928-27241072)
chr1 (210-328)||(3607760-3607878)
chr1 (210-331)||(42561326-42561447)
chr1 (183-331)||(51789601-51789747)
chr1 (183-331)||(14387019-14387167)
chr1 (183-331)||(40647135-40647285)
chr1 (183-331)||(48954218-48954366)
chr1 (183-331)||(50627150-50627298)
chr1 (183-331)||(27926255-27926404)
chr1 (210-328)||(2125101-2125219)
chr1 (183-331)||(9978055-9978204)
chr1 (183-331)||(27928302-27928450)
chr1 (210-331)||(19797012-19797133)
chr1 (210-328)||(15324648-15324767)
chr1 (210-331)||(47940601-47940723)
chr1 (210-331)||(6079403-6079524)
chr1 (242-327)||(48645075-48645161)
chr1 (225-331)||(4299438-4299547)
chr1 (210-328)||(51276726-51276844)
chr1 (225-321)||(957617-957714)
chr1 (242-327)||(9895276-9895363)
chr1 (210-318)||(27670175-27670283)
chr1 (429-491)||(17775292-17775354)
chr1 (242-323)||(1387805-1387888)
chr1 (226-328)||(26208446-26208549)
chr1 (183-282)||(49284298-49284395)
chr1 (293-331)||(49285089-49285127)
chr1 (297-328)||(3607751-3607782)
chr1 (436-491)||(10014699-10014754)
chr1 (297-331)||(1387896-1387930)
chr1 (426-492)||(11343581-11343647)
chr1 (426-492)||(11501601-11501667)
chr1 (297-331)||(27240943-27240977)
chr1 (297-331)||(27928317-27928351)
chr1 (225-319)||(29598354-29598448)
chr1 (293-331)||(36880625-36880663)
chr1 (297-331)||(42561314-42561348)
chr1 (291-328)||(28823217-28823254)
chr1 (292-349)||(48645015-48645072)
chr1 (110-162)||(74011-74062)
chr1 (242-319)||(10262411-10262490)
chr1 (252-331)||(21930399-21930481)
chr1 (297-350)||(26208543-26208598)
[»] chr3 (63 HSPs)
chr3 (209-331)||(12838096-12838218)
chr3 (183-331)||(21969161-21969309)
chr3 (183-331)||(21991597-21991745)
chr3 (183-331)||(26906473-26906621)
chr3 (183-331)||(32237398-32237546)
chr3 (183-331)||(36278760-36278908)
chr3 (183-328)||(3970495-3970640)
chr3 (183-331)||(45487818-45487966)
chr3 (225-331)||(25488387-25488493)
chr3 (225-331)||(25561030-25561136)
chr3 (183-328)||(13078167-13078312)
chr3 (210-331)||(12789625-12789746)
chr3 (210-331)||(44611412-44611533)
chr3 (242-331)||(10017133-10017224)
chr3 (242-331)||(10441319-10441410)
chr3 (183-321)||(22176137-22176276)
chr3 (183-282)||(35368803-35368900)
chr3 (242-331)||(36657494-36657585)
chr3 (210-331)||(4072304-4072426)
chr3 (210-331)||(8831759-8831881)
chr3 (210-331)||(10254587-10254709)
chr3 (210-323)||(25446276-25446390)
chr3 (216-326)||(42105420-42105530)
chr3 (225-331)||(45712949-45713055)
chr3 (249-327)||(36329248-36329328)
chr3 (244-331)||(10117534-10117624)
chr3 (183-321)||(22101193-22101332)
chr3 (242-327)||(36822821-36822908)
chr3 (225-331)||(43639127-43639234)
chr3 (215-328)||(404066-404180)
chr3 (244-327)||(38125242-38125327)
chr3 (225-331)||(43150499-43150605)
chr3 (183-331)||(55340297-55340446)
chr3 (242-331)||(39850405-39850497)
chr3 (183-331)||(1476555-1476703)
chr3 (183-327)||(50099455-50099601)
chr3 (244-328)||(157031-157118)
chr3 (252-328)||(5529913-5529992)
chr3 (242-319)||(44920707-44920786)
chr3 (244-327)||(297600-297683)
chr3 (412-491)||(17628064-17628143)
chr3 (242-327)||(26976903-26976990)
chr3 (183-327)||(37506131-37506274)
chr3 (209-277)||(46222058-46222124)
chr3 (292-331)||(10441277-10441316)
chr3 (109-160)||(20097506-20097556)
chr3 (292-331)||(36657452-36657491)
chr3 (244-328)||(46664198-46664284)
chr3 (297-331)||(3970510-3970544)
chr3 (297-331)||(10117629-10117663)
chr3 (297-331)||(10254687-10254721)
chr3 (297-331)||(12789724-12789758)
chr3 (297-331)||(13078182-13078216)
chr3 (297-331)||(21969176-21969210)
chr3 (297-331)||(21991612-21991646)
chr3 (297-331)||(22176227-22176261)
chr3 (297-331)||(25446368-25446402)
chr3 (293-331)||(35368568-35368606)
chr3 (293-331)||(36822779-36822817)
chr3 (293-331)||(39850363-39850401)
chr3 (297-331)||(45487917-45487951)
chr3 (297-331)||(50099552-50099586)
chr3 (293-333)||(20366703-20366743)
[»] chr4 (32 HSPs)
chr4 (183-328)||(13204399-13204544)
chr4 (183-331)||(1298931-1299079)
chr4 (183-331)||(530673-530821)
chr4 (183-331)||(18417676-18417824)
chr4 (183-331)||(42274496-42274645)
chr4 (183-331)||(4552804-4552952)
chr4 (210-327)||(20435171-20435288)
chr4 (183-331)||(23928572-23928719)
chr4 (183-320)||(21048709-21048845)
chr4 (209-319)||(35360707-35360817)
chr4 (244-331)||(52824258-52824347)
chr4 (183-327)||(32318724-32318868)
chr4 (210-331)||(24969572-24969696)
chr4 (249-328)||(52587383-52587462)
chr4 (183-331)||(55107543-55107691)
chr4 (210-328)||(28809877-28809996)
chr4 (183-312)||(24915798-24915932)
chr4 (210-328)||(27434632-27434750)
chr4 (242-333)||(56552078-56552171)
chr4 (225-319)||(4895003-4895097)
chr4 (242-327)||(3422490-3422577)
chr4 (210-331)||(4688278-4688400)
chr4 (209-324)||(24294493-24294608)
chr4 (297-331)||(530688-530722)
chr4 (110-164)||(15788535-15788589)
chr4 (209-319)||(16995584-16995694)
chr4 (210-327)||(2272390-2272506)
chr4 (252-312)||(23481992-23482054)
chr4 (297-331)||(18417775-18417809)
chr4 (297-331)||(24915813-24915847)
chr4 (297-331)||(27434728-27434762)
chr4 (297-331)||(55107642-55107676)
[»] scaffold0122 (1 HSPs)
scaffold0122 (183-331)||(45853-46001)
[»] chr6 (24 HSPs)
chr6 (225-331)||(885404-885510)
chr6 (210-331)||(8091081-8091202)
chr6 (183-331)||(21379945-21380093)
chr6 (225-331)||(3369004-3369110)
chr6 (183-331)||(15546651-15546799)
chr6 (210-331)||(14393580-14393704)
chr6 (242-331)||(11687204-11687295)
chr6 (225-331)||(18998162-18998269)
chr6 (184-323)||(4238879-4239020)
chr6 (183-331)||(4890484-4890633)
chr6 (242-331)||(7808628-7808719)
chr6 (209-331)||(13439714-13439837)
chr6 (250-331)||(20501725-20501808)
chr6 (183-323)||(29609028-29609168)
chr6 (183-331)||(13172578-13172725)
chr6 (209-320)||(31764355-31764466)
chr6 (293-331)||(7808723-7808761)
chr6 (297-331)||(14393682-14393716)
chr6 (209-289)||(30905039-30905117)
chr6 (292-331)||(11687162-11687201)
chr6 (293-328)||(20501820-20501855)
chr6 (428-486)||(7208209-7208267)
chr6 (428-485)||(7227160-7227218)
chr6 (297-331)||(21379960-21379994)
[»] chr8 (24 HSPs)
chr8 (183-331)||(37114257-37114405)
chr8 (183-331)||(15882219-15882368)
chr8 (210-327)||(17426659-17426778)
chr8 (183-331)||(38520037-38520185)
chr8 (210-331)||(29780990-29781111)
chr8 (183-331)||(8210342-8210490)
chr8 (183-327)||(40891036-40891180)
chr8 (183-322)||(38629502-38629641)
chr8 (225-331)||(23940850-23940957)
chr8 (183-324)||(12234492-12234634)
chr8 (210-331)||(24211309-24211430)
chr8 (183-325)||(24741827-24741969)
chr8 (209-320)||(38405168-38405280)
chr8 (210-313)||(4262007-4262110)
chr8 (244-328)||(33100708-33100794)
chr8 (113-161)||(41510355-41510403)
chr8 (293-328)||(33100667-33100702)
chr8 (216-312)||(36898187-36898287)
chr8 (285-331)||(4035760-4035806)
chr8 (297-331)||(15882319-15882353)
chr8 (297-331)||(24741842-24741876)
chr8 (297-331)||(40891131-40891165)
chr8 (285-338)||(10778669-10778722)
chr8 (436-492)||(17746956-17747012)
[»] chr2 (28 HSPs)
chr2 (216-328)||(9933606-9933718)
chr2 (183-331)||(12850546-12850694)
chr2 (210-331)||(16705752-16705873)
chr2 (183-331)||(2818685-2818833)
chr2 (183-331)||(24101836-24101984)
chr2 (183-331)||(45408644-45408792)
chr2 (183-331)||(34455904-34456052)
chr2 (210-331)||(23835895-23836017)
chr2 (210-324)||(3116902-3117016)
chr2 (183-331)||(9281351-9281499)
chr2 (210-331)||(1924011-1924133)
chr2 (210-328)||(27920594-27920712)
chr2 (250-328)||(20892906-20892987)
chr2 (209-328)||(42713807-42713927)
chr2 (242-331)||(22269741-22269832)
chr2 (242-327)||(34490479-34490566)
chr2 (183-328)||(7737086-7737232)
chr2 (210-319)||(9850789-9850897)
chr2 (110-164)||(27867553-27867607)
chr2 (293-331)||(34490570-34490608)
chr2 (209-282)||(40362553-40362623)
chr2 (209-331)||(43475963-43476087)
chr2 (293-331)||(20892999-20893037)
chr2 (297-331)||(24101851-24101885)
chr2 (242-320)||(29229424-29229505)
chr2 (242-320)||(29342724-29342805)
chr2 (295-331)||(22269838-22269874)
chr2 (291-319)||(37340997-37341025)
[»] scaffold0163 (2 HSPs)
scaffold0163 (210-331)||(1970-2092)
scaffold0163 (297-327)||(1962-1992)
[»] chr5 (31 HSPs)
chr5 (225-331)||(8364676-8364782)
chr5 (183-327)||(12744849-12744993)
chr5 (183-331)||(33629349-33629499)
chr5 (211-331)||(24397278-24397398)
chr5 (210-324)||(1138585-1138699)
chr5 (183-328)||(13754295-13754440)
chr5 (210-323)||(21261970-21262083)
chr5 (210-314)||(1456053-1456157)
chr5 (242-331)||(15855862-15855953)
chr5 (242-331)||(16472974-16473065)
chr5 (209-327)||(35276322-35276441)
chr5 (242-331)||(35420673-35420764)
chr5 (183-328)||(4266004-4266149)
chr5 (183-328)||(12807933-12808078)
chr5 (210-322)||(37655183-37655294)
chr5 (183-322)||(20476459-20476598)
chr5 (210-327)||(35806958-35807075)
chr5 (210-322)||(37552339-37552451)
chr5 (229-331)||(21259780-21259882)
chr5 (183-328)||(43539129-43539274)
chr5 (296-331)||(20464018-20464053)
chr5 (229-328)||(780844-780941)
chr5 (182-233)||(10304773-10304824)
chr5 (292-331)||(15855956-15855995)
chr5 (292-331)||(16473068-16473107)
chr5 (292-331)||(35420631-35420670)
chr5 (297-331)||(20476549-20476583)
chr5 (426-459)||(22651156-22651189)
chr5 (261-327)||(42522900-42522968)
chr5 (183-239)||(10132365-10132421)
chr5 (250-319)||(12191423-12191494)
[»] scaffold0086 (1 HSPs)
scaffold0086 (183-327)||(48149-48293)
[»] scaffold0137 (1 HSPs)
scaffold0137 (229-331)||(10135-10236)
[»] scaffold0107 (1 HSPs)
scaffold0107 (183-331)||(51082-51230)
[»] scaffold0653 (1 HSPs)
scaffold0653 (210-327)||(3424-3541)
[»] scaffold0188 (2 HSPs)
scaffold0188 (210-331)||(7105-7226)
scaffold0188 (297-331)||(7204-7238)
[»] scaffold0006 (1 HSPs)
scaffold0006 (258-351)||(72348-72444)
[»] scaffold0043 (1 HSPs)
scaffold0043 (109-162)||(57827-57879)
[»] scaffold0595 (2 HSPs)
scaffold0595 (273-327)||(5724-5780)
scaffold0595 (297-332)||(5823-5858)
[»] scaffold0069 (1 HSPs)
scaffold0069 (293-331)||(26424-26462)


Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 226 - 502
Target Start/End: Complemental strand, 1072358 - 1072090
Alignment:
Q  226 aactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaaccatacaaaaagcacct 325  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||        ||||    
T  1072358 aactaaattcaccatgtgatttcctcaaatctataatttcctctgagtttgttatataaaaaaaatgtatttttaattaagaaccata--------acct 1072267  T
Q  326 aaggaaatacacaagttttttcctttgtaatattatgttctagagaacacccaaagaagttgttagaagaacaacctatatcagaatcaaaccaatcacc 425  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1072266 aaagaaatacacaagttttttcctttgtaatattatgttctaaagaacacccaaagaagttgttagaagaacaacctatatcagaatcaaaccaatcacc 1072167  T
Q  426 atgttcaaataagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaacaaggtaaaatat 502  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1072166 atgttgaattaagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaacaaggtaaaatat 1072090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 85 - 502
Target Start/End: Complemental strand, 7955256 - 7954828
Alignment:
Q  85 gtagagaacgatcgcactttcctacaaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtgnnnnnnnntattt------g 178  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||         |         |    
T  7955256 gtagataacgatcgaactttccagcaaaaataacaatcgacatggaacacacatatacaaaagaaatatagtagaaagtgaaggaaaaaaaaaaaaaaag 7955157  T
Q  179 gttcaaaacttaggtgcatttccttatatattttt----tgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtt 274  Q
    | |||||| |||||||||||||||| | | |||||    ||||||||| ||||||||||| | ||  |||||| | |||||||||||| |||||||||||    
T  7955156 gctcaaaatttaggtgcatttcctttttttttttttttgtgtatggttcataactaaatttatca--tgatttccacaaatctataatcttctctgagtt 7955059  T
Q  275 tgttatat--ataaaaaatatatttttagttaagaaccatacaaaaagcacctaaggaaatacaca-agttttttcctttgtaatattatgttctagaga 371  Q
    | ||||||  | ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |  |||||||||||||||||||||||||| |||    
T  7955058 ttttatataaaaaaaaaatgtatttttagttaagaaccatacaaaaagcacataaggaaataaacataagtttttcctttgtaatattatgttctaaaga 7954959  T
Q  372 acacccaaagaagttgttagaagaacaacctatatcagaatcaaaccaatcaccatgttcaaataagtttgttatcattaaaacatcaccttgagaagga 471  Q
    | ||||||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||    
T  7954958 aaacccaaagaagttgttagaagaacagcctatattagaatcaaatcaatcacaatgttcaattaagtttgttatcattaaaacatcaccttgagaaaga 7954859  T
Q  472 tattttgattttcctcaacaaggtaaaatat 502  Q
    |||||||| |||| |||||||||||||||||    
T  7954858 tattttgactttcatcaacaaggtaaaatat 7954828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 1072598 - 1072371
Alignment:
Q  12 aaaggggtttagtatagtatataacaataataaattagggtggcatgaaatatcgcataataataaatagttcgtagagaacgatcgcactttcctacaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1072598 aaaggggtttagcatagtatataacaataataaattagggtggcatgaaatatcgcataataataaatagttcgtagagaacgatcgcactttcctacaa 1072499  T
Q  112 aaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtgnnnnnnnntatttggttcaaaacttaggtgcatttccttatatattt 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||| ||||| |||||    
T  1072498 aaataacaatcgatatggaacacacatatacgaaagaaatatagtagaaagtg-aaaaaaatatttggttcaaaatttaggtgcattttcttatgtattt 1072400  T
Q  212 tttgtatggtttataactaaattcaccat 240  Q
    ||||||||||| |||||||||||||||||    
T  1072399 tttgtatggttcataactaaattcaccat 1072371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 183 - 328
Target Start/End: Original strand, 3953046 - 3953191
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||| || |||| ||||||||| |||||||||||||||  |||||| |||||||| ||||||||| |  ||||||||||||    
T  3953046 aaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcacca--tgatttcctcaaatccataattttcacaaagtttgttatat 3953143  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaag 328  Q
      ||||||||  |||||||||||||||||||||||||||| |||||||    
T  3953144 ccaaaaaatatgtatttttagttaagaaccatacaaaaagtacctaag 3953191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 30259070 - 30259218
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  ||||  |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  30259070 aaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 30259167  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  30259168 ccaaaaaatatgtatttttagttaagaaccatacaaaaagcacccaaggaa 30259218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 31231618 - 31231768
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||||||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  31231618 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 31231715  T
Q  283 at--aaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
     |  |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  31231716 gtccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 31231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 24836187 - 24836042
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  24836187 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 24836090  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaag 328  Q
      |||||||||  |||||||||| |||||||||| |||||||||||||    
T  24836089 ccaaaaaatatgtatttttagttnagaaccatacgaaaagcacctaag 24836042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 183 - 333
Target Start/End: Complemental strand, 34052446 - 34052296
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  || ||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  34052446 aaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatat 34052349  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaaat 333  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  34052348 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaaat 34052296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 331
Target Start/End: Complemental strand, 30594856 - 30594712
Alignment:
Q  187 cttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataa 286  Q
    ||||||| || ||||||| ||  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  ||    
T  30594856 cttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaa 30594759  T
Q  287 aaaata--tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||  ||||||||||||||||| || | ||||||||||||||||    
T  30594758 aaaatatgtatttttagttaagaactatgcgaaaagcacctaaggaa 30594712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 10936516 - 10936622
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||||||||  | || ||||||||||||||||||||  |||||||||||   |||||||||  ||||||||||||||||||||| |||||||    
T  10936516 taactaaattcaccatg--acttcctcaaatctataattttctcaaagtttgttataaccaaaaaatatgtatttttagttaagaaccatacgaaaagca 10936613  T
Q  323 cctaaggaa 331  Q
    |||||||||    
T  10936614 cctaaggaa 10936622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 45997539 - 45997660
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||| ||||||  |||||||||  ||||||||||||||    
T  45997539 tttttgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttattatatccaaaaaatatgtatttttagttaaga 45997636  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    |||||||  ||| |||||||||||    
T  45997637 accatacctaaaacacctaaggaa 45997660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 331
Target Start/End: Complemental strand, 12142345 - 12142211
Alignment:
Q  198 ttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa---atata 294  Q
    |||||||| | ||||| |||| |||  |||||||||||||||||  ||||||||||||| |||||||||||  || |||||||||  |||||   |||||    
T  12142345 ttccttatgtgtttttcgtatagttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagattgttatatccaaaaatatatata 12142248  T
Q  295 tttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||  ||||||| |||||||    
T  12142247 tttttagttaagaaccatacccaaagcacgtaaggaa 12142211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 29278004 - 29277861
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||||||||||  ||||| ||| |||||||||||||||  |||||| || ||||| | |||||||||  | |||||| |||    
T  29278004 aaaacttaggtacaattccttatatattttccgtatgatttttaactaaattcacca--tgatttccttaaatccaaaattttctcaaactttgttgtat 29277907  T
Q  283 ataaaa-aatatatttttagttaagaaccatacaaaaagcacctaa 327  Q
      |||| | | |||||||||||||||||||||||||||| ||||||    
T  29277906 ccaaaacagtgtatttttagttaagaaccatacaaaaagtacctaa 29277861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 38883331 - 38883240
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  38883331 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaa 38883240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 20184242 - 20184391
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||| ||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  20184242 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 20184339  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||   | |||||||||||||||| ||||| ||||||| ||||||||    
T  20184340 ccaaaaaaatatgtatttttagttaagaatcatacgaaaagcagctaaggaa 20184391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 328
Target Start/End: Complemental strand, 37093908 - 37093790
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaat--atatttttagttaaga 307  Q
    |||| ||||||||| |||||||||||||||||  |||| ||||||| ||||||||||||  ||||||||||||  |||||||  ||||||||| ||||||    
T  37093908 ttttcgtatggtttttaactaaattcaccatg--atttcctcaaatttataattttctcaaagtttgttatatccaaaaaatatatatttttaattaaga 37093811  T
Q  308 accatacaaaaagcacctaag 328  Q
    | ||||| ||||  |||||||    
T  37093810 atcatacgaaaaatacctaag 37093790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 327
Target Start/End: Original strand, 39617845 - 39617990
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || || |||| || || || ||||||||  |||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||    
T  39617845 aaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcaccatg--atttcctccaatccataattttctcaaagtttgttatat 39617942  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaa 327  Q
      ||||||   | ||||||||||||||||| |||| ||||||||||||    
T  39617943 ccaaaaaaatatttatttttagttaagaactatacgaaaagcacctaa 39617990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 327
Target Start/End: Original strand, 9285745 - 9285862
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    |||||||||||||  ||| |||||||||||||  |||| ||||||| ||||||||| ||  ||||||||||||  ||||||||  |||||||| ||||||    
T  9285745 tttttgtatggttcttaattaaattcaccatg--atttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaaga 9285842  T
Q  308 accatacaaaaagcacctaa 327  Q
    ||||||| ||||| ||||||    
T  9285843 accatacgaaaagtacctaa 9285862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 327
Target Start/End: Original strand, 9289812 - 9289929
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    |||||||||||||  ||| |||||||||||||  |||| ||||||| ||||||||| ||  ||||||||||||  ||||||||  |||||||| ||||||    
T  9289812 tttttgtatggttcttaattaaattcaccatg--atttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaaga 9289909  T
Q  308 accatacaaaaagcacctaa 327  Q
    ||||||| ||||| ||||||    
T  9289910 accatacgaaaagtacctaa 9289929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 35339282 - 35339430
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||| ||||  ||||  ||||||| |||||||||||  ||||||||||||    
T  35339282 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatg--atttcttcaaatccataattttctcaaagtttgttatat 35339379  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||||  |||||||| ||||||||||||| ||||| || |||||||    
T  35339380 ccaaaaaatatgtatttttatttaagaaccatacgaaaagtacataaggaa 35339430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 40358240 - 40358146
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaa 319  Q
    |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||    
T  40358240 taactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatatcaaaaaaatatgcatttttagttaagaaccatacgaaaa 40358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 38528482 - 38528564
Alignment:
Q  253 aatctataattttctctgagtttgttatatataaaaaatatat----ttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||| |||||||||||  ||||||||||||| |||||| ||||    ||||||||||||||||||| ||||||||||||||||    
T  38528482 aatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 38528564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 10398487 - 10398390
Alignment:
Q  182 caaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttata 281  Q
    ||||||||||||||||||||||||||  |||||||||||||  ||||||||||  |||  |||||| |||||||  ||||| |||||  |||||||||||    
T  10398487 caaaacttaggtgcatttccttatatgctttttgtatggttcttaactaaattatcca--tgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 25742494 - 25742580
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||| |||||||| |||||||||||  ||||||||||||  ||||||||  ||||||||||||| |||||||| |||||||| ||||    
T  25742494 atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaacaaccatacgaaaagcacttaag 25742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 35665696 - 35665768
Alignment:
Q  261 attttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||  ||||||||||||  |||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  35665696 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctaaggaa 35665768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 328
Target Start/End: Complemental strand, 48103505 - 48103390
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||||||||  |||||||||||     ||||||| |||||||| |||||  ||||  ||||||||||||  |||||||||  ||||||||||||||    
T  48103505 tttttgtatggttcttaactaaattc-----gtgatttcctcaaatccataataatctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 48103411  T
Q  308 accatacaaaaagcacctaag 328  Q
    | ||||| |||| ||||||||    
T  48103410 atcatacgaaaaacacctaag 48103390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 24123759 - 24123898
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || |||||||| || |||||||||||||  ||||||||   || |||  |||| |||||||| |||||||||||  ||||||||||||    
T  24123759 aaaatttaggtacaattccttatgtactttttgtatggttcctaactaaaaatactatg--atttcctcaaatccataattttctcaaagtttgttatat 24123856  T
Q  283 --ataaaaaata--tatttttagttaagaaccatacaaaaag 320  Q
      | ||||||||  |||||||| ||||||||||||| |||||    
T  24123857 ccaaaaaaaatatgtatttttaattaagaaccatacgaaaag 24123898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 25705416 - 25705361
Alignment:
Q  109 caaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtg 164  Q
    |||||||||||||| |||| |||||||||||||| || |||||| |||||||||||    
T  25705416 caaaaataacaatcaacatagaacacacatatacaaatgaaataaagtagaaagtg 25705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 33749793 - 33749674
Alignment:
Q  201 cttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaa--aat-atattt 297  Q
    |||| |||||||||||||||||  |||||||||||| ||  |||||| || ||||  |||||||||||  ||||| |||||| |||||  ||| ||||||    
T  33749793 cttaaatattttttgtatggttcttaactaaattcatca--tgatttccttaaattcataattttctcaaagtttattatatctaaaaataatgatattt 33749696  T
Q  298 ttagttaagaaccatacaaaaa 319  Q
    ||||||||||| ||||| ||||    
T  33749695 ttagttaagaatcatacgaaaa 33749674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 31231667 - 31231633
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||||||||||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaa 31231633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 47237488 - 47237574
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaata-----tatttttagttaagaaccatacaaaaagcacct 325  Q
    |||| ||| |||| |||||||||||  ||||||||||||| |||||| |     |||||||||||||||||||||| ||||||||||    
T  47237488 atttcctcgaatccataattttctcaaagtttgttatataaaaaaaaaaaaatgtatttttagttaagaaccatacgaaaagcacct 47237574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 16876517 - 16876597
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaagaaccatacaaaaag 320  Q
    |||||||||||||||  |||||||||  |||||||||||||  |||||  ||||||||||||| || ||||||| ||||||    
T  16876517 tgattttctcaaatccgtaattttcttagagtttgttatatccataaaggatatatttttagtcaaaaaccatataaaaag 16876597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 33355166 - 33355206
Alignment:
Q  182 caaaacttaggtgcatttccttatatattttttgtatggtt 222  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  33355166 caaaacttaggtgcatttccttatgtactttttgtatggtt 33355206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 333
Target Start/End: Original strand, 40596799 - 40596839
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaaat 333  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  40596799 tatttttagttaagaaccatacaaaaaacacctaaagaaat 40596839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 7955363 - 7955328
Alignment:
Q  11 caaaggggtttagtatagtatataacaataataaat 46  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7955363 caaaggggtttagcatagtatataacaataataaat 7955328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 31521556 - 31521655
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||  |||||||||| ||||||  ||||||||||||  |||||||| ||  ||||| ||||||  |||||||||  ||||||||||||||    
T  31521556 ttttcgtatggttcttaactaaatttaccatg--attttctcaaattcataattttttcaaagtttattatatccaaaaaatattcatttttagttaaga 31521653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 35665690 - 35665655
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||||||||||||||||||||| |||||||||||||    
T  35665690 tatttttagttaagaaccatacgaaaagcacctaag 35665655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 38883334 - 38883373
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  38883334 atatttttagttaagaaccatacgaaaagcatctaaggaa 38883373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 24836138 - 24836172
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaa 24836172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 35339331 - 35339297
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaa 35339297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 38528447 - 38528409
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  38528447 tatttttagttaagaaccatacaaaaagcatttaaggaa 38528409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 38989093 - 38989172
Alignment:
Q  201 cttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||| ||||||| |||| |||| |||||||||| | |||   ||||||| |||||||||||||||||  ||||||||||||    
T  38989093 cttatgtatttttcgtatagtttttaactaaatttatcata--attttcttaaatctataattttctcaaagtttgttatat 38989172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 327
Target Start/End: Original strand, 48103483 - 48103513
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||||||||||||||||||||||||||||    
T  48103483 tttagttaagaaccatacaaaaagcacctaa 48103513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 33721879 - 33721846
Alignment:
Q  298 ttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||| ||||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaa 33721846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 327
Target Start/End: Original strand, 39143743 - 39143854
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaac 309  Q
    |||| ||||||||  | ||||||||||||||   |||| |||||||| ||||| |||||  |||||||||||||    | |||||| | |||||||||||    
T  39143743 ttttcgtatggttcttgactaaattcaccata--atttcctcaaatccataatattctcaaagtttgttatata----atatatatatatagttaagaac 39143836  T
Q  310 catacaaaaagcacctaa 327  Q
    ||||| |||| |||||||    
T  39143837 catacgaaaaacacctaa 39143854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 10398437 - 10398473
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaaat 333  Q
    ||||||||||||||||||||||||||  |||||||||    
T  10398437 tttagttaagaaccatacaaaaagcatataaggaaat 10398473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 491
Target Start/End: Complemental strand, 20331473 - 20331425
Alignment:
Q  443 ttatcattaaaacatcaccttgagaaggatattttgattttcctcaaca 491  Q
    ||||||||||||||||| | | |||||||| || |||||||||||||||    
T  20331473 ttatcattaaaacatcaacatcagaaggattttgtgattttcctcaaca 20331425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 50162542 - 50162691
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  ||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||  ||||||||||||    
T  50162542 aaaacttaggtacaattccttaggtattttttgtatggtttttaattaaattcacc--gtgattttctcaaatctataattttctcaaagtttgttatat 50162639  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||   | || ||||||||||||||||||||||||||||||||||||    
T  50162640 ccaaaaaaatatgtaattttagttaagaaccatacaaaaagcacctaaggaa 50162691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 19954915 - 19955063
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||| |  |||| |||| |||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  19954915 aaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 19955012  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  19955013 ccaaaaaatatgtatttttagttaagaaccatacaaaaagtacctaaggaa 19955063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 2854536 - 2854684
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  2854536 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 2854633  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  2854634 ccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaa 2854684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 5189636 - 5189488
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || ||||||| ||  |||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  ||||||||||||    
T  5189636 aaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatat 5189539  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  5189538 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 5189488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 23698506 - 23698654
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  23698506 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 23698603  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  23698604 ccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaa 23698654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 327
Target Start/End: Original strand, 27240928 - 27241072
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  27240928 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 27241025  T
Q  283 --ataaaaaatatatttttagttaagaaccatacaaaaagcacctaa 327  Q
      | |||| |||||||||||||||||||||||||  |||||||||||    
T  27241026 ccaaaaaatatatatttttagttaagaaccatacgcaaagcacctaa 27241072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 3607760 - 3607878
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  3607760 tttttgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 3607857  T
Q  308 accatacaaaaagcacctaag 328  Q
    ||||||| |||||||||||||    
T  3607858 accatacgaaaagcacctaag 3607878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 42561326 - 42561447
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||  |||||||||||||||||  ||||  ||| ||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  42561326 ttttcgtatggttcttaactaaattcaccatg--atttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 42561423  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||||    
T  42561424 accatacaaaaagcacctaaggaa 42561447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 51789601 - 51789747
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||| |||||||||||||||||  |||| ||||| || |||||||||||  ||| ||||||||    
T  51789601 aaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatg--atttcctcaattccataattttctcaaagtatgttatat 51789698  T
Q  283 ataaaaaatatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
     |||||||| | |||||||||||||||||||| |||||||  |||||||    
T  51789699 ctaaaaaatgtgtttttagttaagaaccatacgaaaagcatttaaggaa 51789747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 14387019 - 14387167
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||| ||   ||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||| ||||||    
T  14387019 aaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttattatat 14387116  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| |||| |||||||||||    
T  14387117 ccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaa 14387167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 40647285 - 40647135
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||| ||| |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  40647285 aaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 40647188  T
Q  283 ataaaaa----atatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    | |||||    || ||||||||||||||||||| || ||||||| ||||||||    
T  40647187 aaaaaaaaaatatgtatttttagttaagaaccacacgaaaagcagctaaggaa 40647135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 48954218 - 48954366
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  || ||||  |||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  48954218 aaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 48954315  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  48954316 ccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaa 48954366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 50627298 - 50627150
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||||||  |||| ||||||||  ||||||||   | ||||  |||| |||||||| |||||||||||  ||||||||||||    
T  50627298 aaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaatatcatg--atttcctcaaatccataattttctcaaagtttgttatat 50627201  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  50627200 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaa 50627150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 27926255 - 27926404
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||||||||||  | |||||||| |  |||| ||||||||  |||||||||||||  |||||||| ||||| || |||||||||||  ||||||||||||    
T  27926255 aaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaattcac--tgtgatttcctcaa-tccataattttctcaaagtttgttatat 27926351  T
Q  283 --ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      | |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  27926352 ccaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 27926404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 2125101 - 2125219
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||  |||||||||||||||||  ||||| | |||| ||||||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  2125101 ttttcgtatggttcttaactaaattcaccatg--atttttttaaatttataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaaga 2125198  T
Q  308 accatacaaaaagcacctaag 328  Q
    || |||| |||||||||||||    
T  2125199 actatacgaaaagcacctaag 2125219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 9978055 - 9978204
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || |||||||| |  |||| ||||| ||  ||||||||||||| |||  |||| |||||||| |||||||||||  ||||||||||||    
T  9978055 aaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattcactatg--atttcctcaaatccataattttctcaaagtttgttatat 9978152  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||   | |||||||||||||||||||||| ||||||||||||||||    
T  9978153 ccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 9978204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 27928302 - 27928450
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||| | || |||||||| |  |||||||||||||  |||||||||||||  |||||||| ||||| || |||||||||||  ||||||||||||    
T  27928302 aaaacttagatacaattccttatgtgctttttgtatggttcttaactaaattcac--tgtgatttcctcaa-tccataattttctcaaagtttgttatat 27928398  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||   | |||||||||||||||||||||| |||| |||||||||||    
T  27928399 ccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaa 27928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 19797012 - 19797133
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||| ||||||||   ||||||  |||| |||||||| |||||||| ||  ||||||||||||  |||||||||  ||||||||||||||    
T  19797012 ttttcgtatggtttttaactaaaaataccatg--atttcctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaaga 19797109  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||| ||||||||||||||||    
T  19797110 accatacgaaaagcacctaaggaa 19797133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 210 - 328
Target Start/End: Complemental strand, 15324767 - 15324648
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  ||||||||||||| |||  |||| |||||||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  15324767 ttttcgtatggttcttaactaaattcactatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 15324670  T
Q  307 aaccatacaaaaagcacctaag 328  Q
    |||||||| |||||||||||||    
T  15324669 aaccatacgaaaagcacctaag 15324648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 47940601 - 47940723
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  |||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  47940601 ttttcgtatggttcttaactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 47940698  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||| |||| |||||||||||    
T  47940699 aaccatacgaaaaacacctaaggaa 47940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 6079524 - 6079403
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||| ||||    
T  6079524 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagtgaaga 6079427  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||| ||| |||| || ||||||||    
T  6079426 accgtacgaaaaacatctaaggaa 6079403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 48645075 - 48645161
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||| |||||||| |||||||||||  |||||||||||| |||||||||  |||||||||||||||||| ||| ||||||||||||    
T  48645075 tgatttcctcaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaacc-tacgaaaagcacctaa 48645161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 4299438 - 4299547
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatat--atttttagttaagaaccatacaaaaa 319  Q
    ||||||||||||||||   |||| |||||||| |||||||||||  ||||||||||||   | |||||||||  ||||||||||||||||||||| ||||    
T  4299438 taactaaattcaccatt--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaagaaccatacgaaaa 4299535  T
Q  320 gcacctaaggaa 331  Q
     |||||||||||    
T  4299536 acacctaaggaa 4299547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 51276726 - 51276844
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||  ||||||||||||  |||  |||| |||||||| |||||||||||  ||||| ||||||| |||||| ||  |||||||| |||||    
T  51276726 ttttcgtatggttcttaactaaattcattatg--atttcctcaaatccataattttctcaaagtttattatataaaaaaaaaatgtatttttagctaaga 51276823  T
Q  308 accatacaaaaagcacctaag 328  Q
    ||||||| |||||||||||||    
T  51276824 accatacgaaaagcacctaag 51276844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 957714 - 957617
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat-ataaaaaata--tatttttagttaagaaccatacaaaaagc 321  Q
    |||||||||||||||||  ||||||||||||| |||||||||||  |||||||||||| | ||||||||  || ||||||||||||| ||||| ||||||    
T  957714 taactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatatcaaaaaaaatatgtaattttagttaagaatcatacgaaaagc 957617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 9895363 - 9895276
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||| |||||||  |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||| ||||||    
T  9895363 tgatttcctcaaatacataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaa 9895276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 210 - 318
Target Start/End: Complemental strand, 27670283 - 27670175
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||| |||||||||||| ||||  |||| || ||||| |||||||||||  ||||| ||||||  |||||||||  ||||||||||||||    
T  27670283 ttttcgtatggtttttaactaaattcatcatg--atttccttaaatccataattttctcaaagttttttatattcaaaaaatatgtatttttagttaaga 27670186  T
Q  308 accatacaaaa 318  Q
    | |||||||||    
T  27670185 atcatacaaaa 27670175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 429 - 491
Target Start/End: Complemental strand, 17775354 - 17775292
Alignment:
Q  429 ttcaaataagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaaca 491  Q
    ||||| |||||||||||||| |||||||||| ||| |||||||| || |||||||||||||||    
T  17775354 ttcaattaagtttgttatcagtaaaacatcaacttaagaaggattttgtgattttcctcaaca 17775292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 1387888 - 1387805
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcac 323  Q
    |||||| |||||||  |||||||||||  ||||| ||||||  |||||||||  ||||||||||||||||||||| ||||||||    
T  1387888 tgatttcctcaaattcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcac 1387805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 26208549 - 26208446
Alignment:
Q  226 aactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||||||   ||||  ||||||| |||||||||||  ||||||||||||  ||||||   | ||||||||||| |||||||||| |||||||    
T  26208549 aactaaattcaccata--atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaaccatacgaaaagca 26208452  T
Q  323 cctaag 328  Q
    ||||||    
T  26208451 cctaag 26208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 49284298 - 49284395
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || || ||||  | ||||||||||||||  |||||||||||||||  ||||||||| ||||| |||||||| ||  ||||||||||||    
T  49284298 aaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcacca--tgattttcttaaatccataattttttcaaagtttgttatat 49284395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 49285089 - 49285127
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  49285089 tatttttagttaagaaccatacgaaaagcacctaaggaa 49285127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 328
Target Start/End: Complemental strand, 3607782 - 3607751
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaag 328  Q
    ||||||||||||||||||||||||||||||||    
T  3607782 tttagttaagaaccatacaaaaagcacctaag 3607751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Original strand, 10014699 - 10014754
Alignment:
Q  436 aagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaaca 491  Q
    ||||||||||||||||||| | || ||| |||||||| || |||||||||||||||    
T  10014699 aagtttgttatcattaaaataccaacttaagaaggattttgtgattttcctcaaca 10014754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 1387896 - 1387930
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  1387896 tttagttaagaaccatacgaaaagcacctaaggaa 1387930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 492
Target Start/End: Original strand, 11343581 - 11343647
Alignment:
Q  426 atgttcaaataagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaacaa 492  Q
    ||||||||||||||||||| || |||||||||||  || |||| ||| || ||||| ||||||||||    
T  11343581 atgttcaaataagtttgttgtcgttaaaacatcaatttaagaaagattttgtgattatcctcaacaa 11343647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 492
Target Start/End: Original strand, 11501601 - 11501667
Alignment:
Q  426 atgttcaaataagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaacaa 492  Q
    ||||||||||||||||||| || |||||||||||  || |||| ||| || ||||| ||||||||||    
T  11501601 atgttcaaataagtttgttgtcgttaaaacatcaatttaagaaagattttgtgattatcctcaacaa 11501667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 27240977 - 27240943
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaa 27240943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 27928351 - 27928317
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||||||| |||||||    
T  27928351 tttagttaagaaccatacaaaaagcacataaggaa 27928317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 29598448 - 29598354
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 319  Q
    ||||||||||||| |||  |||| || ||||| |||||||||||  ||||||||||||  ||||||||  ||||||||||| | |||||||| ||||    
T  29598448 taactaaattcactatg--atttccttaaatccataattttctcaaagtttgttatattaaaaaaatatgtatttttagttgataaccatacgaaaa 29598354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 36880625 - 36880663
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  36880625 tatttttagttaagaaccatacgaaaagcatctaaggaa 36880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 42561348 - 42561314
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  42561348 tttagttaagaaccatacgaaaagcacctaaggaa 42561314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 28823217 - 28823254
Alignment:
Q  291 tatatttttagttaagaaccatacaaaaagcacctaag 328  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  28823217 tatatttttagttaagaaccatacaaaaaactcctaag 28823254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 48645072 - 48645015
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaaatacacaagttttttcct 349  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||  ||||||| ||||    
T  48645072 atatttttagttaagaagcatacgaaaagcacctaagaatataccaaagttttctcct 48645015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 74011 - 74062
Alignment:
Q  110 aaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaag 162  Q
    ||||||||||||| |||||||||||||||||| |||| || | ||||||||||    
T  74011 aaaaataacaatccacatggaacacacatata-gaaataattgtagtagaaag 74062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 10262490 - 10262411
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaagaaccatacaaaaa 319  Q
    ||||||| ||||||| | |||||| || ||||||| |||||  | |||||||||| ||||||||||||| ||||| ||||    
T  10262490 tgattttttcaaatccacaattttttcagagtttgctatattcacaaaaaatatagttttagttaagaatcatacgaaaa 10262411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 331
Target Start/End: Complemental strand, 21930481 - 21930399
Alignment:
Q  252 aaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||| ||||||||||   ||||||||||||  ||||||   | |||||||||||||||||||||| |||| || ||||||||    
T  21930481 aaatccataattttcttaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacaactaaggaa 21930399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 26208543 - 26208598
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa--atacacaagttttttcctt 350  Q
    ||||||| |||||||||| ||||||||||||||||  ||||| ||||||| |||||    
T  26208543 tttagttcagaaccatacgaaaagcacctaaggaattatacataagttttctcctt 26208598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 6e-32; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 12838218 - 12838096
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaag 306  Q
    ||||| ||||||||| |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  |||||||||  |||||||||||||    
T  12838218 tttttcgtatggtttttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaag 12838121  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||||||    
T  12838120 aaccatacaaaaagcacctaaggaa 12838096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 21969161 - 21969309
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  ||||||||||||    
T  21969161 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatat 21969258  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  21969259 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 21969309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 21991597 - 21991745
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  ||||||||||||    
T  21991597 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatat 21991694  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  21991695 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 21991745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 26906621 - 26906473
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  26906621 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 26906524  T
Q  283 ataaaaaatatat--ttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||||  ||||||||||||||||||| ||||| ||||||||||    
T  26906523 ccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaa 26906473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 32237398 - 32237546
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  | ||||| ||||||||  |||||||||| ||||||  ||||||||| ||| |||||||||||  ||||||||||||    
T  32237398 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatttaccatg--attttctcagatccataattttctcaaagtttgttatat 32237495  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||| ||||||||||||| ||||||||||||||||    
T  32237496 ccaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaa 32237546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 36278760 - 36278908
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||| ||| |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  36278760 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 36278857  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  36278858 ccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaa 36278908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 328
Target Start/End: Original strand, 3970495 - 3970640
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||||||||||||| |||||||  |  |||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  ||||||||||||    
T  3970495 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatat 3970592  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaag 328  Q
      |||||||||  ||||||||||||||||||||| ||||| |||||||    
T  3970593 ccaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaag 3970640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 45487966 - 45487818
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||  |||||||||||   |||||||||||    
T  45487966 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaattcataattttctcaatgtttgttatat 45487869  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  45487868 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 45487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 25488387 - 25488493
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||||||||  ||||  ||| ||| |||||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||||    
T  25488387 taactaaattcaccatg--atttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagca 25488484  T
Q  323 cctaaggaa 331  Q
    |||||||||    
T  25488485 cctaaggaa 25488493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 25561136 - 25561030
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||||||||  ||||  ||| ||| |||||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||||    
T  25561136 taactaaattcaccatg--atttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagca 25561039  T
Q  323 cctaaggaa 331  Q
    |||||||||    
T  25561038 cctaaggaa 25561030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 183 - 328
Target Start/End: Original strand, 13078167 - 13078312
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||||||||||||| |||||||  |  |||| ||||||||  |||||||||||||||  |||||| || ||||| |||||||||||  ||||||||||||    
T  13078167 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcacca--tgatttccttaaatccataattttctcaaagtttgttatat 13078264  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaag 328  Q
      ||||||||  |||||||||||||||| ||||| ||||| |||||||    
T  13078265 ccaaaaaatatgtatttttagttaagaatcatacgaaaagtacctaag 13078312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 12789746 - 12789625
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||||||||  ||| |||||||||||||  |||| |||||||  |||||||| ||  ||||||||||||  |||||||||  ||||||||||||||    
T  12789746 tttttgtatggttcttaattaaattcaccatg--atttcctcaaattcataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaaga 12789649  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||| |||| |||||||||||    
T  12789648 accatacgaaaaacacctaaggaa 12789625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 44611412 - 44611533
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    ||||||||| |||  |||||||||||||||||  ||||  ||||||  |||||||||||  ||||||||||||  |||||||||  |||||||||||| |    
T  44611412 tttttgtatagttcttaactaaattcaccatg--atttcttcaaattcataattttctcaaagtttgttatatcaaaaaaatatatatttttagttaaaa 44611509  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    |||||||||||| |||||||||||    
T  44611510 accatacaaaaaacacctaaggaa 44611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 10017224 - 10017133
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||| |||||||| ||  ||||||||||||  |||||||||  ||||||||||||||||||||  ||||||||||||||||    
T  10017224 tgattttctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaa 10017133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 10441319 - 10441410
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||| ||| ||||||||||||||||    
T  10441319 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccgtaccaaaagcacctaaggaa 10441410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 22176276 - 22176137
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||| |  |||||||||||||  |||||||||||||  | |||||| |||||||| |||||||||||  ||||||| ||||    
T  22176276 aaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaattcac--tatgatttcctcaaatccataattttctcaaagtttgtaatat 22176179  T
Q  283 ---ataaaaaatatatttttagttaagaaccatacaaaaagc 321  Q
       | |||| || |||||||||||||||||||||| ||||||    
T  22176178 ccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22176137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 35368900 - 35368803
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || || ||||| | ||||| ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||||    
T  35368900 aaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcacca--tgattttctcaaatccataattttctcaaagtttgttatat 35368803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 36657494 - 36657585
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  36657494 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaa 36657585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 4072304 - 4072426
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  |||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  4072304 ttttcgtatggttcttaactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 4072401  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||| |||| |||||||||||    
T  4072402 aaccatacgaaaaacacctaaggaa 4072426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 8831881 - 8831759
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  |||||||||||||||||  ||||  ||||||| |||||||||||  ||||||||||||  ||||||   | ||||||||||| ||    
T  8831881 ttttcgtatggttcttaactaaattcaccatg--atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagtttag 8831784  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||| ||||||||||||||||    
T  8831783 aaccatacgaaaagcacctaaggaa 8831759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 10254709 - 10254587
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  |||||||||||| ||||  ||||||||||||| |||||||| ||  ||||||||||||  ||||||   | ||||||||||||||    
T  10254709 ttttcgtatggttcttaactaaattcatcatg--attttctcaaatccataattttttcaaagtttgttatatccaaaaaaatatgtatttttagttaag 10254612  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||  ||||||||||||||||    
T  10254611 aaccatatgaaaagcacctaaggaa 10254587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 25446390 - 25446276
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  25446390 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 25446293  T
Q  307 aaccatacaaaaagcac 323  Q
    |||||||| ||||||||    
T  25446292 aaccatacgaaaagcac 25446276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 326
Target Start/End: Original strand, 42105420 - 42105530
Alignment:
Q  216 tatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa--tatatttttagttaagaaccata 313  Q
    |||||||  ||||||||||||||  |||||||||| ||||| |||||| ||||  |||||||||| | |||||||  | |||||||||||||||||||||    
T  42105420 tatggttcttaactaaattcacc--gtgattttcttaaatccataattctctcaaagtttgttatctctaaaaaaattgtatttttagttaagaaccata 42105517  T
Q  314 caaaaagcaccta 326  Q
    |||||| ||||||    
T  42105518 caaaaaacaccta 42105530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 45712949 - 45713055
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||||||||  |||| |||||| | |||||||| ||  ||||||||||||  |||||||||  |||||||||| |||||||||| |||||||    
T  45712949 taactaaattcaccatg--atttcctcaaagccataattttatcaaagtttgttatatccaaaaaatatgtatttttagtttagaaccatacgaaaagca 45713046  T
Q  323 cctaaggaa 331  Q
    |||||||||    
T  45713047 cctaaggaa 45713055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 36329248 - 36329328
Alignment:
Q  249 ctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||||||||    
T  36329248 ctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaa 36329328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 10117624 - 10117534
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||| |||||||||||  ||||||||||||  ||||||   | |||||||||||||||||||||  ||||||||||||||||    
T  10117624 attttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaa 10117534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 22101332 - 22101193
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||||    |||| ||||||||  ||||||||||||| |||  |||| |||||||| |||||||||||  ||||||||||||    
T  22101332 aaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaattcactatg--atttcctcaaatccataattttctcaaagtttgttatat 22101235  T
Q  283 ---ataaaaaatatatttttagttaagaaccatacaaaaagc 321  Q
       | |||| || |||||||||||||||||||||| ||||||    
T  22101234 ccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22101193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 36822821 - 36822908
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||| |||| ||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||||||||    
T  36822821 tgatttcctcagatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaa 36822908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 43639127 - 43639234
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaagc 321  Q
    |||| ||||||||||||  ||||  ||||||| |||||||||||  ||||||||||||  ||||||   |||||||||||||||||| ||||| ||||||    
T  43639127 taaccaaattcaccatg--atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaatcatacgaaaagc 43639224  T
Q  322 acctaaggaa 331  Q
    ||||||||||    
T  43639225 acctaaggaa 43639234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 404180 - 404066
Alignment:
Q  215 gtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaagaacca 311  Q
    ||||||||  |||||||||||||||||  |||| ||||| ||||||||||||||  ||||||||||||   | |||| || ||||||||||||| || ||    
T  404180 gtatggttcttaactaaattcaccatg--atttcctcaagtctataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaaaaatca 404083  T
Q  312 tacaaaaagcacctaag 328  Q
    ||| |||||||||||||    
T  404082 tacgaaaagcacctaag 404066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 38125242 - 38125327
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
    ||||||| ||||| ||||||||||   ||||||||||||| |||||||||  ||||||||||||||||||||| |||| |||||||    
T  38125242 attttcttaaatccataattttcttaaagtttgttatatacaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaa 38125327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 43150605 - 43150499
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
    ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||  |||||||||  |||||||||||| |||||||| |||||||    
T  43150605 taactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagca 43150508  T
Q  323 cctaaggaa 331  Q
    ||| |||||    
T  43150507 cctgaggaa 43150499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 55340297 - 55340446
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || || ||||| | ||||| ||||| ||  |||||| ||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  55340297 aaaatttaggtacaatttcttatgtgtttttcgtatgattcttaactatattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 55340394  T
Q  283 ---ataaaaaatatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
       | |||| || |||||||||||||||||||||  ||||  ||||||||||    
T  55340395 ccaaaaaaatatgtatttttagttaagaaccatatgaaaaatacctaaggaa 55340446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 39850405 - 39850497
Alignment:
Q  242 tgattttctcaaatctataattttctctga-gtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  | |||||||||||  |||||||||  ||||||||||||||| ||||| ||||||||||||||||    
T  39850405 tgatttcctcaaatccataattttctcacaagtttgttatatccaaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaa 39850497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 1476555 - 1476703
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||   | ||||||||||||||  |||| || ||||| |||||| ||||  |||||||||| |    
T  1476555 aaaacttaggtacaattccttaggtgcttttggtatggttctaacctaaattcaccatg--atttccttaaatccataattctctcaaagtttgttatct 1476652  T
Q  283 ataaaaaa--tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
     |||||||  | |||||||||||||||||||||  ||||||||||||||||    
T  1476653 ctaaaaaaattgtatttttagttaagaaccatatgaaaagcacctaaggaa 1476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 50099601 - 50099455
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  ||||||||||||||||   |||| |||||||  |||||||||||  ||||||||||||    
T  50099601 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccata--atttcctcaaattcataattttctcaaagtttgttatat 50099504  T
Q  283 --ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
      | |||||||||  ||||||| |||| |||||||| ||||||||||||    
T  50099503 ccaaaaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaa 50099455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 157031 - 157118
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaa---atatatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||| |||||||| |||||||||||  ||||||||||||| |||||   || ||||||||| ||||||| |||| |||||||||||||    
T  157031 atttcctcaaatccataattttctcaaagtttgttatataaaaaaaaatatgtatttttagctaagaactataccaaaagcacctaag 157118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 328
Target Start/End: Complemental strand, 5529992 - 5529913
Alignment:
Q  252 aaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||||||||||||||||  |||||| |||||  ||||||   | |||||||||||||||||||||| |||||||||||||    
T  5529992 aaatctataattttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaag 5529913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 44920707 - 44920786
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 319  Q
    |||||||||||||| ||||||||||||  ||||| ||||||  ||||||||  ||||||||||||||||| ||| |||||    
T  44920707 tgattttctcaaatttataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaactataaaaaaa 44920786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 297600 - 297683
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaaccatacaaaaagcacctaa 327  Q
    ||||||| ||||| |||||||||||  ||||||||||||  ||||| ||| |||||||||||||| ||||  ||||||| ||||    
T  297600 attttctgaaatccataattttctcatagtttgttatattcaaaaattatgtttttagttaagaatcatatgaaaagcatctaa 297683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 491
Target Start/End: Complemental strand, 17628143 - 17628064
Alignment:
Q  412 tcaaaccaatcaccatgttcaaataagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaaca 491  Q
    |||||| ||| || |||||||| |||||||| ||||||||||| |||| ||| |||||||| || | |||||||||||||    
T  17628143 tcaaactaataactatgttcaattaagtttgctatcattaaaatatcaacttaagaaggattttgttattttcctcaaca 17628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 26976903 - 26976990
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatata-taaaaa-atatatttttagttaagaaccatacaaaaagcacctaa 327  Q
    ||||||||||||||| |||||||||||  ||||| || |||  |||||| |||||||||||||||| |||||||| |||| |||||||    
T  26976903 tgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaaccatacgaaaaacacctaa 26976990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 327
Target Start/End: Original strand, 37506131 - 37506274
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||||||| |||||  ||||||  | |||||| |||||||  |||||||||| ||    ||||||||| ||||  |||||||||||  |||||||||| |    
T  37506131 aaaacttaagtgcaactccttaagtgttttttctatggttcttaactaaatttaca---tgattttcttaaattcataattttctcaaagtttgttatct 37506227  T
Q  283 --ataaaaaatatatttttagttaagaaccatacaaaaagcacctaa 327  Q
      | ||||||| ||||||||||||||||||| || |||| |||||||    
T  37506228 ccaaaaaaaatgtatttttagttaagaaccacacgaaaaacacctaa 37506274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 46222058 - 46222124
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgt 277  Q
    ||||| ||||||||| |||||||||||||||  ||||||||| ||||  |||||||||||| |||||||    
T  46222058 tttttcgtatggtttttaactaaattcacca--tgattttcttaaattcataattttctcttagtttgt 46222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 10441316 - 10441277
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  10441316 atatttttagttaagaatcataccaaaagcacctaaggaa 10441277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 20097556 - 20097506
Alignment:
Q  109 caaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaa 160  Q
    |||||||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  20097556 caaaaataacaatccacatgaaacacacatata-gaaagaattatagtagaa 20097506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 36657491 - 36657452
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  36657491 atatttttagttaagaaccatacgaaaagcatctaaggaa 36657452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 46664284 - 46664198
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||| |||||||  |||||||||||  ||||||||||||  ||||||||  ||||||||||||||||| |||| ||||  |||||||    
T  46664284 atttcctcaaattcataattttctcaaagtttgttatattaaaaaaatatgtatttttagttaagaactatacgaaaaatacctaag 46664198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 3970544 - 3970510
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaa 3970510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 10117629 - 10117663
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaa 10117663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 10254687 - 10254721
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaa 10254721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 12789724 - 12789758
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||| ||||||||||||||||||||||||||||||    
T  12789724 tttaattaagaaccatacaaaaagcacctaaggaa 12789758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 13078216 - 13078182
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaa 13078182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 21969210 - 21969176
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaa 21969176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 21991646 - 21991612
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaa 21991612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 22176227 - 22176261
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||||||| |||||||    
T  22176227 tttagttaagaaccatacaaaaagcacataaggaa 22176261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 25446368 - 25446402
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaa 25446402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 35368606 - 35368568
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  35368606 tatttttagttaagaaccatacgaaaagcacataaggaa 35368568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 36822817 - 36822779
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  36822817 tatttttagttaagaaccatacgaaaagcagctaaggaa 36822779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 39850401 - 39850363
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  39850401 tatttttagttaagaaccatacgaaaaacacctaaggaa 39850363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 45487917 - 45487951
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaa 45487951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 50099552 - 50099586
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaa 50099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 20366743 - 20366703
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaaat 333  Q
    |||||||||||||||||||||| |||| || ||||||||||    
T  20366743 tatttttagttaagaaccatacgaaaaacatctaaggaaat 20366703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 13204544 - 13204399
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||| || |||| ||||||||| |||||||||||||||  |||||| |||||||| ||||||||| |  ||||||||||||    
T  13204544 aaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcacca--tgatttcctcaaatccataattttcacaaagtttgttatat 13204447  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaag 328  Q
      ||||||||  |||||||||||||||||||||||||||| |||||||    
T  13204446 ccaaaaaatatgtatttttagttaagaaccatacaaaaagtacctaag 13204399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 1299079 - 1298931
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  ||||  |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  1299079 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 1298982  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  1298981 ccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaa 1298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 530673 - 530821
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||||||||||||  ||||||||||||||||   |||| |||||||| |||||||||||  ||||||||||||    
T  530673 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatc--atttcctcaaatccataattttctcaaagtttgttatat 530770  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  530771 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 530821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 18417824 - 18417676
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||||||||||||  ||| |||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  18417824 aaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 18417727  T
Q  283 ataaaaaatatat--ttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  18417726 ccaaaaaatatatatttttagttaagaaccatacgaaaagcacctaaggaa 18417676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 42274496 - 42274645
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||| ||  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  42274496 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 42274593  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||   |||||||||||||||||||||||| |||| |||||||||||    
T  42274594 ccaaaaaaatatatatttttagttaagaaccatacgaaaaacacctaaggaa 42274645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 4552952 - 4552804
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||||||||||  ||| |||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||    
T  4552952 aaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatat 4552855  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||||  ||||||||||||| |||||||  |||||||| |||||||    
T  4552854 ccaaaaaatatttatttttagttaaaaaccatatgaaaagcacttaaggaa 4552804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 210 - 327
Target Start/End: Original strand, 20435171 - 20435288
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  20435171 ttttcgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcgaagtttgttatatccaaaaaatatgtatttttagttaaga 20435268  T
Q  308 accatacaaaaagcacctaa 327  Q
    ||||||| ||||||||||||    
T  20435269 accatacgaaaagcacctaa 20435288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 23928572 - 23928719
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  | ||||| ||||| ||  |||||||||||||||||  |||| |||||||| |||||||||||  | ||||||||||    
T  23928572 aaaacttaggtacaattccttag-tgtttttcgtatgattcttaactaaattcaccatg--atttcctcaaatccataattttctcaaaatttgttatat 23928668  T
Q  283 --ataaaaaatatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      | |||||||||||||||||||||||| |||||  |||||||||||||||    
T  23928669 ccaaaaaaaatatatttttagttaagaatcatacgcaaagcacctaaggaa 23928719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 21048709 - 21048845
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||| ||| ||  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  21048709 aaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcgaagtttgttatat 21048806  T
Q  283 -ataaaaaatatatttttagttaagaaccatacaaaaag 320  Q
     | |||| || |||||||||||||||||||||| |||||    
T  21048807 caaaaaatatgtatttttagttaagaaccatacgaaaag 21048845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 35360817 - 35360707
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 306  Q
    ||||| ||||||||  |||||||||||||||||  |||| || ||||| |||||||||||  |||||||||||| |||||||||  ||||||||||||||    
T  35360817 tttttcgtatggttcttaactaaattcaccatg--atttccttaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaag 35360720  T
Q  307 aaccatacaaaaa 319  Q
    |||||||| ||||    
T  35360719 aaccatacgaaaa 35360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 52824347 - 52824258
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||| |||||||| |||||||||||  ||||| |||||| ||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatctaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 52824258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 327
Target Start/End: Original strand, 32318724 - 32318868
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||| |  |||| ||||||||  |||||||||||||||  |||||| |||| ||| |||||||||||  ||||||||||||    
T  32318724 aaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcacca--tgatttcctcagatccataattttctcaaagtttgttatat 32318821  T
Q  283 --ataaaaaatatatttttagttaagaaccatacaaaaagcacctaa 327  Q
      | |||| ||||||||||| ||||||| ||||  ||||||||||||    
T  32318822 ccaaaaaatatatatttttaattaagaatcatatgaaaagcacctaa 32318868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 24969572 - 24969696
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat-----ataaaaaatatatttttagtta 304  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||     | ||||||| ||||||||||||    
T  24969572 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagtta 24969669  T
Q  305 agaaccatacaaaaagcacctaaggaa 331  Q
    ||||| |||| ||||||||||||||||    
T  24969670 agaactatacgaaaagcacctaaggaa 24969696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 52587383 - 52587462
Alignment:
Q  249 ctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||||||| |||||||||||  ||||||||||||  ||||| ||||| |||||||||||||||||| |||||||||||||    
T  52587383 ctcaaatccataattttctcaaagtttgttatatcaaaaaattatatatttagttaagaaccatacgaaaagcacctaag 52587462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 55107691 - 55107543
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||||||||||||  | |||||||| ||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  55107691 aaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatttaccatg--atttcctcaaatgcataattttctcaaagtttgttatat 55107594  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||| |||||  ||||||||||||||||||||  |||||||| |||||||    
T  55107593 ccaaataatatgtatttttagttaagaaccatatgaaaagcacataaggaa 55107543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 28809877 - 28809996
Alignment:
Q  210 tttttgtatggtttataactaaatt-caccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 306  Q
    |||| |||| |||| |||||||||| |||||||  ||||||||||||| |||||||||||  | ||||||||||  ||||||||  ||||| ||||||||    
T  28809877 ttttggtattgtttttaactaaatttcaccatg--attttctcaaatccataattttctcaaaatttgttatatccaaaaaatatgtatttctagttaag 28809974  T
Q  307 aaccatacaaaaagcacctaag 328  Q
    |||||||| ||||||| |||||    
T  28809975 aaccataccaaaagcagctaag 28809996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 24915798 - 24915932
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  24915798 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 24915895  T
Q  283 --ataaaaaata-----tatttttagttaagaaccat 312  Q
      | ||||||||     ||||||||||||||||||||    
T  24915896 ccaaaaaaaataatatgtatttttagttaagaaccat 24915932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 328
Target Start/End: Complemental strand, 27434750 - 27434632
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatatatttttagttaaga 307  Q
    |||| ||||||||  |||||||||| |||||   |||| |||||||  |||||||||||  ||||||||||||  | ||||||| |||||||||||||||    
T  27434750 ttttcgtatggttcttaactaaatttaccata--atttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaatgtatttttagttaaga 27434653  T
Q  308 accatacaaaaagcacctaag 328  Q
    || ||||||||||||| ||||    
T  27434652 actatacaaaaagcacataag 27434632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 333
Target Start/End: Complemental strand, 56552171 - 56552078
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataa--aaaatatatttttagttaagaaccatacaaaaagcacctaaggaaat 333  Q
    |||||| |||||||| |||||||||||  |||||||||||   ||  ||| | ||||||||||| |||||||||||||||||||||||||||||    
T  56552171 tgatttcctcaaatccataattttctcaaagtttgttataaccaaggaaagtgtatttttagttgagaaccatacaaaaagcacctaaggaaat 56552078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 4895097 - 4895003
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaa 319  Q
    |||||||||| ||||||  |||| |||||||  |||||||||||  ||||||||||||  ||||||||  ||||||||||||||||| |||||||||    
T  4895097 taactaaatttaccatg--atttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaactatacaaaaa 4895003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 3422490 - 3422577
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatata-taaaaa-atatatttttagttaagaaccatacaaaaagcacctaa 327  Q
    ||||||||||||||| |||||||||||  ||||| || |||  |||||| |||||||||||||||| |||||||| |||| |||||||    
T  3422490 tgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaaccatacgaaaaacacctaa 3422577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 4688278 - 4688400
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  |||||||||||||  |||||||| |||||||  | |||||||||  ||||||||||||  ||||||   | |||||||| |||||    
T  4688278 ttttcgtatggttcttaactaaattcac--tgtgatttcctcaaattcacaattttctcaaagtttgttatatccaaaaaaatatgtatttttaattaag 4688375  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||| |||| || ||||||||    
T  4688376 aaccatacgaaaatcatctaaggaa 4688400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 24294608 - 24294493
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 306  Q
    ||||| ||||||||  |||||||||||||||  | |||| |||||||   ||||||||||  ||||||||||||  ||||||||  |||||||| |||||    
T  24294608 tttttcgtatggttcttaactaaattcacca--taatttcctcaaattcgtaattttctcaaagtttgttatatcaaaaaaatatgtatttttaattaag 24294511  T
Q  307 aaccatacaaaaagcacc 324  Q
    || ||||| |||||||||    
T  24294510 aatcatacgaaaagcacc 24294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 530722 - 530688
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||||||||||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaa 530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 15788535 - 15788589
Alignment:
Q  110 aaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtg 164  Q
    ||||||| ||||| |||||||||||||||| | |||||| |||||||||||||||    
T  15788535 aaaaatagcaatccacatggaacacacataaatgaaagatatatagtagaaagtg 15788589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 16995584 - 16995694
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa--atatatttttagttaag 306  Q
    ||||| ||||||||| ||| |||||||| ||||  ||||||||||| | || ||||| || ||||||||||||| ||||||  || |||| ||||||||     
T  16995584 tttttcgtatggtttttaattaaattcaacatg--attttctcaaacccatcattttttcagagtttgttatatctaaaaaagatgtattgttagttaaa 16995681  T
Q  307 aaccatacaaaaa 319  Q
    |||||||| ||||    
T  16995682 aaccatacgaaaa 16995694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 327
Target Start/End: Complemental strand, 2272506 - 2272390
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatatat-ttttagttaagaa 308  Q
    |||| ||||||||  || ||||||||||||||  |||| || ||||| |||||||| ||  |||||||| |||  ||||||  | | |||||||||||||    
T  2272506 ttttcgtatggttcttagctaaattcaccatg--atttccttaaatccataattttatcaaagtttgttctatccaaaaaaattgtattttagttaagaa 2272409  T
Q  309 ccatacaaaaagcacctaa 327  Q
    ||||| |||||||||||||    
T  2272408 ccatataaaaagcacctaa 2272390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 23481992 - 23482054
Alignment:
Q  252 aaatctataattttctctgagtttgttatatataaaaa--atatatttttagttaagaaccat 312  Q
    |||||||||||||||||  | |||||||||||||||||  || ||| ||||||||||||||||    
T  23481992 aaatctataattttctcaaaatttgttatatataaaaaagatgtatatttagttaagaaccat 23482054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 18417775 - 18417809
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||| ||||||||||||||||||||||||||||||    
T  18417775 tttaattaagaaccatacaaaaagcacctaaggaa 18417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 24915847 - 24915813
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaa 24915813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 27434728 - 27434762
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaa 27434762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 55107642 - 55107676
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| ||||||||||||||||||||||||||||    
T  55107642 tttagtaaagaaccatacaaaaagcacctaaggaa 55107676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 46001 - 45853
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  ||||  |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  46001 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 45904  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  45903 ccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaa 45853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 885510 - 885404
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||||    
T  885510 taactaaattcatcatg--attttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagca 885413  T
Q  323 cctaaggaa 331  Q
    |||||||||    
T  885412 cctaaggaa 885404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 8091202 - 8091081
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||  ||||||||||||||  ||||||| || ||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  8091202 ttttcgtatggttcttaactaaattcacc--gtgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 8091105  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||| ||||||||||||||||    
T  8091104 accatacgaaaagcacctaaggaa 8091081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 21379945 - 21380093
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||  |||||||||||   |||||||||||    
T  21379945 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaattcataattttctcaatgtttgttatat 21380042  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  21380043 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 21380093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 3369110 - 3369004
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| |||||||    
T  3369110 taactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaaccatacgaaaagca 3369013  T
Q  323 cctaaggaa 331  Q
    |||||||||    
T  3369012 cctaaggaa 3369004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 15546799 - 15546651
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  ||| |||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  15546799 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatat 15546702  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  |||||||||||||||||||||||||| || ||||||||    
T  15546701 ccaaaaaatatgtatttttagttaagaaccatacaaaaaacaactaaggaa 15546651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 14393704 - 14393580
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa-----atatatttttagtta 304  Q
    |||||||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||  |||||     || ||||||||||||    
T  14393704 tttttgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaagaaatatgtatttttagtta 14393607  T
Q  305 agaaccatacaaaaagcacctaaggaa 331  Q
    |||| ||||| ||||||||||||||||    
T  14393606 agaatcatacgaaaagcacctaaggaa 14393580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 11687204 - 11687295
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  11687204 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaa 11687295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 18998162 - 18998269
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat-ataaaaaatat--atttttagttaagaaccatacaaaaagc 321  Q
    |||||||||||||||||  |||| ||| |||| |||||||||||  |||||||||||| | |||||||||  ||||||| ||||||||||||| ||||||    
T  18998162 taactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaagaaccatacgaaaagc 18998259  T
Q  322 acctaaggaa 331  Q
    ||||||||||    
T  18998260 acctaaggaa 18998269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 4239020 - 4238879
Alignment:
Q  184 aaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat- 282  Q
    |||||||||| || |||||| | |  |||||||||||||  ||| |||||||||||||  |||||||||||||  ||||||||||  ||||||||||||     
T  4239020 aaacttaggtacaattccttctgtgctttttgtatggttcttaattaaattcaccatg--attttctcaaatccttaattttctcaaagtttgttatatc 4238923  T
Q  283 -ataaaaaata--tatttttagttaagaaccatacaaaaagcac 323  Q
     | ||||||||  |||||||| || |||||||||||||||||||    
T  4238922 caaaaaaaatatgtatttttaattgagaaccatacaaaaagcac 4238879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 4890484 - 4890633
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || || ||||  | ||||| ||||||||  |||||||||| ||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  4890484 aaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatg--atttcctcaaattcataattttctcaaagtttgttatat 4890581  T
Q  283 ataaaaaa-tata--tttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||| |||   |||||||||||||||||||| ||||||||||||||||    
T  4890582 ccaaaaaaatatgcgtttttagttaagaaccatacgaaaagcacctaaggaa 4890633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 7808719 - 7808628
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| ||||||||||||||||||||  ||||||||||||  ||||||||  ||||||||||||| ||||| || |||| |||||||||||    
T  7808719 tgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccaaacgaaaaacacctaaggaa 7808628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 13439837 - 13439714
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaa 305  Q
    ||||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||   | |||| || ||||||||| |||    
T  13439837 tttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagctaa 13439740  T
Q  306 gaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||| ||||| || |||||||    
T  13439739 gaaccatacgaaaagtacttaaggaa 13439714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 20501808 - 20501725
Alignment:
Q  250 tcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| |||| |||||||||||    
T  20501808 tcaaatccataattttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaa 20501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 29609168 - 29609028
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||||||| || || ||||||| ||  |||| ||||||||| ||||||||||||||  ||||||| || ||||| |||||||||||  |||||||||| |    
T  29609168 aaaacttacgtacaattccttagatgcttttcgtatggtttttaactaaattcacc--gtgatttccttaaatccataattttctcaaagtttgttatct 29609071  T
Q  283 --ataaaaaatatatttttagttaagaaccatacaaaaagcac 323  Q
      | |||| || ||||||||||||||||||| || ||||||||    
T  29609070 ccaaaaaagatgtatttttagttaagaaccacacgaaaagcac 29609028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 13172578 - 13172725
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||  || || ||||| ||||||||  ||||||||||||   | | |||| |||||||| |||||||||||  ||||||||||||    
T  13172578 aaaacttaggtacaattctctagatgtttttcgtatggttcttaactaaattca---tatcatttcctcaaatccataattttctcaaagtttgttatat 13172674  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||||  |||||||| ||||||||||||| |||| ||| |||||||    
T  13172675 ccaaaaaatatgtatttttacttaagaaccatacgaaaaacacttaaggaa 13172725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 31764355 - 31764466
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaag 306  Q
    ||||||||||||||  |||||||||||||||  | ||||||||||||  |||||||||||  |||||||| |||  ||||||||  ||| ||||||||||    
T  31764355 ttttttgtatggttcttaactaaattcacca--ttattttctcaaattcataattttctcaaagtttgttgtatccaaaaaatatgtatctttagttaag 31764452  T
Q  307 aaccatacaaaaag 320  Q
    ||| |||| |||||    
T  31764453 aactatacgaaaag 31764466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 7808723 - 7808761
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  7808723 tatttttagttaagaaccatacgaaaagcacctaaggaa 7808761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 14393682 - 14393716
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||||||||||||||||    
T  14393682 tttagttaagaaccatacaaaaagcacctaaggaa 14393716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 30905117 - 30905039
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa 289  Q
    |||||| |||||||| |||||||||||| |  ||||| | ||||||||||||||||||||  ||||| ||||||| |||||    
T  30905117 ttttttctatggtttttaactaaattcatc--gtgatctactcaaatctataattttctcaaagttttttatataaaaaaa 30905039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 11687201 - 11687162
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  11687201 atatttttagttaagaaccatacgaaaagcatctaaggaa 11687162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 20501820 - 20501855
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||||||||||||||||||||| |||||||||||||    
T  20501820 tatttttagttaagaaccatacgaaaagcacctaag 20501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 7208267 - 7208209
Alignment:
Q  428 gttcaaataagtttgttatcattaaaacatcaccttgagaaggatattttgattttcct 486  Q
    |||||||||| |||||||||||||||| |||| ||| ||||| || || ||||||||||    
T  7208267 gttcaaataaatttgttatcattaaaaaatcaacttaagaagaattttgtgattttcct 7208209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 7227218 - 7227160
Alignment:
Q  428 gttcaaataagtttgttatcattaaaacatcaccttgagaagga-tattttgattttcc 485  Q
    ||||||||||||||||||||||||||| |||| ||| ||||| | | ||||||||||||    
T  7227218 gttcaaataagtttgttatcattaaaaaatcaacttaagaagaatttttttgattttcc 7227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 21379994 - 21379960
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaa 21379960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 37114405 - 37114257
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || ||| ||| || ||||||||||||||  |||||||||||||||||  ||||||| ||||| |||||||||||  ||||| ||||||    
T  37114405 aaaatttaggtacaattctttagatgttttttgtatggttcttaactaaattcaccatg--attttcttaaatccataattttctcaaagtttattatat 37114308  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||| ||||||||||||| ||||||||||||||||    
T  37114307 ccaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaa 37114257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 15882368 - 15882219
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  ||||||||||||| ||||| |||||  |||| |||||||    
T  15882368 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataatattctcaaagttagttatat 15882271  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||   | |||||||||||||||||||||||||||||||||||||||    
T  15882270 ccaaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaa 15882219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 327
Target Start/End: Original strand, 17426659 - 17426778
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat--ataaaaaatata--tttttagttaa 305  Q
    |||| ||||||||  |||||||||||||||||  |||| ||||||||||||||||||||  ||||||||||||  | ||||||||||  |||||||||||    
T  17426659 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatctataattttctcaaagtttgttatatccaaaaaaaatatacatttttagttaa 17426756  T
Q  306 gaaccatacaaaaagcacctaa 327  Q
    ||||||||| ||||||||||||    
T  17426757 gaaccatacgaaaagcacctaa 17426778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 38520185 - 38520037
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||| ||| |||||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  38520185 aaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatat 38520088  T
Q  283 ataaaaaatatat--ttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||||  ||||||||||||||||||| ||||||| ||||||||    
T  38520087 ccaaaaaatatatatttttagttaagaaccatacgaaaagcaactaaggaa 38520037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 29780990 - 29781111
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||| |||||||||| |||||   |||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  29780990 ttttcgtatggtttttaactaaatttaccata--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 29781087  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||| ||||||| ||||||||    
T  29781088 accatacgaaaagcatctaaggaa 29781111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 8210490 - 8210342
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||||||| || || ||||||| || ||||||||||| ||  |||| ||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||    
T  8210490 aaaacttaagtacaattccttagatgttttttgtatgattcttaaccaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatat 8210393  T
Q  283 ataaaaaatatattt--ttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||||||| |  ||||||||||| ||||| ||||||||||||||||    
T  8210392 ccaaaaaatatatatatttagttaagaatcatacgaaaagcacctaaggaa 8210342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 40891180 - 40891036
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  40891180 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 40891083  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaa 327  Q
      ||||||||  |||||||||||||||||| ||| |||| |||||||    
T  40891082 ccaaaaaatatgtatttttagttaagaaccgtacgaaaaacacctaa 40891036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 322
Target Start/End: Complemental strand, 38629641 - 38629502
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  | ||||| ||||||||  |||||||||||||||  |||||| |||||||  |||||||||||  ||||| ||||||    
T  38629641 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcacca--tgatttcctcaaattcataattttctcaaagtttattatat 38629544  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagca 322  Q
      ||||||||  |||||||||||||||||||||| |||||||    
T  38629543 ccaaaaaatatgtatttttagttaagaaccatacgaaaagca 38629502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 23940850 - 23940957
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaagaaccatacaaaaagc 321  Q
    |||||||||||||||||  |||| ||||||||  ||||||||||  |||||||||||| |||||||   | ||||||||||||| |||||||| ||||||    
T  23940850 taactaaattcaccatg--atttcctcaaatccgtaattttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaaccatacgaaaagc 23940947  T
Q  322 acctaaggaa 331  Q
    ||||||||||    
T  23940948 acctaaggaa 23940957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 324
Target Start/End: Complemental strand, 12234634 - 12234492
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagttt-gttata 281  Q
    ||||||||||| || || |||| ||  |||| ||||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||| ||||||    
T  12234634 aaaacttaggtacaatttcttagatgcttttcgtatggttattaactaaattcacgatg--atttcctcaaattcataattttctcaaagttttgttata 12234537  T
Q  282 tataaaaaatat--atttttagttaagaaccatacaaaaagcacc 324  Q
    |  |||||||||  ||||||||||||||||||||| |||||||||    
T  12234536 tccaaaaaatatgtatttttagttaagaaccatacgaaaagcacc 12234492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 24211309 - 24211430
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||  ||| ||||||||||  || |||| || || || |||||||||||  |||||||||||| ||||||||||  |||| || ||||||    
T  24211309 ttttcgtatggttcttaattaaattcacc--gtaatttccttaattccataattttctcatagtttgttatatctaaaaaatatgtatttctatttaaga 24211406  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||| ||||||||||||||||    
T  24211407 accatacgaaaagcacctaaggaa 24211430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 325
Target Start/End: Original strand, 24741827 - 24741969
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||||||  |||||| |||||||| || |||||||| |||||| ||||||    
T  24741827 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcacca--tgatttcctcaaatccatgattttctcagagtttattatat 24741924  T
Q  283 ataaaaaa--tatatttttagttaagaaccatacaaaaagcacct 325  Q
      || | |  | |||||||||||||||||||||| |||| |||||    
T  24741925 gcaacataggtgtatttttagttaagaaccatacgaaaatcacct 24741969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 38405280 - 38405168
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaa 305  Q
    ||||||||||||||  ||||||||||||  |||  ||||||| ||||   ||||||||||  ||||||||||||  ||||||   | |||||||||||||    
T  38405280 ttttttgtatggttcttaactaaattcataatg--attttcttaaattcgtaattttctcaaagtttgttatatccaaaaaaagatgtatttttagttaa 38405183  T
Q  306 gaaccatacaaaaag 320  Q
    |||||||||||||||    
T  38405182 gaaccatacaaaaag 38405168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 4262007 - 4262110
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    |||| ||||||||  ||||||||||||| |||  |||| ||||| || |||||||||||  ||||||||||||  ||||||||  |||||||| ||||||    
T  4262007 ttttcgtatggttcttaactaaattcactatg--atttcctcaagtccataattttctcaaagtttgttatattcaaaaaatatgtatttttaattaaga 4262104  T
Q  308 accata 313  Q
    ||||||    
T  4262105 accata 4262110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 33100708 - 33100794
Alignment:
Q  244 attttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||| |||||||| |||||||||||  ||||||||||||  ||||||||  | |||||||||||||||| ||| |||||||| ||||    
T  33100708 atttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtttttttagttaagaaccgtacgaaaagcacataag 33100794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 41510355 - 41510403
Alignment:
Q  113 aataacaatcgacatggaacacacatatacgaaagaaatatagtagaaa 161  Q
    |||||||||||||||| || |||| |||| |||||||||||||||||||    
T  41510355 aataacaatcgacatgaaatacacgtatatgaaagaaatatagtagaaa 41510403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 33100702 - 33100667
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||||||||||||||||||||| |||||||||||||    
T  33100702 tatttttagttaagaaccatacgaaaagcacctaag 33100667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 312
Target Start/End: Original strand, 36898187 - 36898287
Alignment:
Q  216 tatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttata-tataaaaaata-----tatttttagttaagaac 309  Q
    |||||||| ||||||| |||||  |||||||||  ||||||||||||||| |  |||||||||||| || ||||||||     |||||||||||||||||    
T  36898187 tatggtttttaactaagttcac--tgtgattttagcaaatctataatttttttagagtttgttatattaaaaaaaatatattgtatttttagttaagaac 36898284  T
Q  310 cat 312  Q
    |||    
T  36898285 cat 36898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 4035806 - 4035760
Alignment:
Q  285 aaaaaatatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  4035806 aaaatatatatttttagttaagtaccatacgaaaagcacctgaggaa 4035760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 15882319 - 15882353
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaa 15882353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 24741876 - 24741842
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaa 24741842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 40891131 - 40891165
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaa 40891165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 10778722 - 10778669
Alignment:
Q  285 aaaaaatatatttttagttaagaaccatacaaaaagcacctaaggaaatacaca 338  Q
    ||||||| |||||||||||||||||||||| ||||||   ||||||||| ||||    
T  10778722 aaaaaatgtatttttagttaagaaccatacgaaaagcgtgtaaggaaatgcaca 10778669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 17747012 - 17746956
Alignment:
Q  436 aagtttgttatcattaaaacatcaccttgagaaggatattttgattttcctcaacaa 492  Q
    ||||||||||||||| |||||||| ||| ||||| || || |||||||||| |||||    
T  17747012 aagtttgttatcattgaaacatcaacttaagaagaattttgtgattttccttaacaa 17746956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 216 - 328
Target Start/End: Original strand, 9933606 - 9933718
Alignment:
Q  216 tatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccata 313  Q
    |||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||| |||||| |||||||||  |||||||||||||||||||||    
T  9933606 tatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttattatatctaaaaaatatgtatttttagttaagaaccata 9933703  T
Q  314 caaaaagcacctaag 328  Q
    | |||||||||||||    
T  9933704 cgaaaagcacctaag 9933718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 12850546 - 12850694
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || |||||||  || |||||||||||||| |||||||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  12850546 aaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatat 12850643  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      ||||||||  |||||||||||||||||||||| ||||||| || |||||    
T  12850644 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcatctgaggaa 12850694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 16705873 - 16705752
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||| ||||||||| ||||||||||||| |||  ||||||||||| | |||||||| ||  ||||||||||||  |||||||||  ||||||||||||||    
T  16705873 ttttcgtatggtttttaactaaattcactatg--attttctcaaagccataattttatcaaagtttgttatatccaaaaaatatgtatttttagttaaga 16705776  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||| ||||||||||||||||    
T  16705775 accatacgaaaagcacctaaggaa 16705752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 2818833 - 2818685
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || ||| |||  | ||||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||||||  |||||| |||||    
T  2818833 aaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgatatat 2818736  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||| ||||| ||||||||||||||||    
T  2818735 ccaaaaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaa 2818685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 24101836 - 24101984
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||  ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  24101836 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatataccatg--atttcctcaaatccataattttctcaaagtttgttatat 24101933  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  24101934 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaa 24101984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 45408792 - 45408644
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  ||| |||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||    
T  45408792 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatat 45408695  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  |||||||||||||||||||||||||| |||||||||||    
T  45408694 ccaaaaaatatgtatttttagttaagaaccatacaaaaaacacctaaggaa 45408644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 34456052 - 34455904
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || || ||||| | ||||| ||||||||  ||| |||||||| |||   |||| ||||||||||||||||||||  ||||||||||||    
T  34456052 aaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcata--atttcctcaaatctataattttctcaaagtttgttatat 34455955  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||| ||||||||||||| ||||||||||||||||    
T  34455954 ccaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaa 34455904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 23836017 - 23835895
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||| |||| ||||| ||||||  |||| |||||||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  23836017 ttttcgtatggtttttaacaaaatttaccatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 23835920  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||| ||||||||||||||||    
T  23835919 aaccatacgaaaagcacctaaggaa 23835895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 3117016 - 3116902
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    |||| ||||||||  ||||||||||||  |||  ||||||||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  3117016 ttttcgtatggttcttaactaaattcattatg--attttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 3116919  T
Q  308 accatacaaaaagcacc 324  Q
    ||||||| |||||||||    
T  3116918 accatacgaaaagcacc 3116902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 9281351 - 9281499
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||| ||| || |||||||  || ||||  |||||||  ||||||||||||| |||  |||| |||||||  |||||||||||  ||||||||||||    
T  9281351 aaaactttggtacaattccttaggtacttttcatatggttcttaactaaattcactatg--atttcctcaaattcataattttctcaaagtttgttatat 9281448  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  9281449 ccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaa 9281499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 1924011 - 1924133
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaag 306  Q
    |||| ||||||||  |||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||  ||||||   | ||||||||||||||    
T  1924011 ttttcgtatggttcttaactaaattcaccatg--atttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaag 1924108  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    |||||||| |||| |||||||||||    
T  1924109 aaccatacgaaaaacacctaaggaa 1924133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 328
Target Start/End: Complemental strand, 27920712 - 27920594
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatatat--ttttagttaaga 307  Q
    |||| ||||||||  |||||||||||||||||  |||| |||||||| |||||||| ||  ||||||||||||  ||||||||| |  ||||||||||||    
T  27920712 ttttcgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtagttttagttaaga 27920615  T
Q  308 accatacaaaaagcacctaag 328  Q
     |||||| |||||||||||||    
T  27920614 cccatacgaaaagcacctaag 27920594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 328
Target Start/End: Complemental strand, 20892987 - 20892906
Alignment:
Q  250 tcaaatctataattttctctgagtttgttatat--ataaaaa-atatatttttagttaagaaccatacaaaaagcacctaag 328  Q
    ||||||| |||||||||||  ||||||||||||  ||||||| || |||||||||||||||||||||| |||||||||||||    
T  20892987 tcaaatccataattttctcaaagtttgttatatccataaaaatatgtatttttagttaagaaccatacgaaaagcacctaag 20892906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 328
Target Start/End: Original strand, 42713807 - 42713927
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat---ataaaaaatatatttttagttaa 305  Q
    ||||| ||||||||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||| ||||||   | |||| || |||||||||||||    
T  42713807 tttttcgtatggttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttattatatccaaaaaaatatgtatttttagttaa 42713904  T
Q  306 gaaccatacaaaaagcacctaag 328  Q
    ||| ||| | |||||||| ||||    
T  42713905 gaatcatgcgaaaagcacttaag 42713927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 22269832 - 22269741
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  ||||||||  ||||||||||||| || ||||| |||| |||||||||||    
T  22269832 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaatcatacgaaaaacacctaaggaa 22269741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 34490566 - 34490479
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||| |||| ||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| |||| |||||||    
T  34490566 tgatttcctcagatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaa 34490479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 7737232 - 7737086
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||| ||  |||||||||| ||||||  |||| |||||| | |||||||||||  ||||||||||||    
T  7737232 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatttaccatg--atttcctcaaagccataattttctcaaagtttgttatat 7737135  T
Q  283 ataaaaaa---tatatttttagttaagaaccatacaaaaagcacctaag 328  Q
      ||||||   | |||||||||||||||| ||||| |||||||||||||    
T  7737134 ccaaaaaaatatgtatttttagttaagaatcataccaaaagcacctaag 7737086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 9850789 - 9850897
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa-atatatttttagttaagaa 308  Q
    |||| ||||||||  |||||||||| ||||||  ||||||| ||||| |||||||||||  | ||||||||||  ||||| || ||||||||||||||||    
T  9850789 ttttcgtatggttcttaactaaatttaccatg--attttcttaaatccataattttctcaaaatttgttatatcaaaaaatatgtatttttagttaagaa 9850886  T
Q  309 ccatacaaaaa 319  Q
    |||||| ||||    
T  9850887 ccatacgaaaa 9850897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 27867553 - 27867607
Alignment:
Q  110 aaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaagtg 164  Q
    ||||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  27867553 aaaaatagcaatccacatggaacacacatatatgaaagaactatagtagaaagtg 27867607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 34490570 - 34490608
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  34490570 tatttttagttaagaaccatacgaaaagcacctaaggaa 34490608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 40362623 - 40362553
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||| ||||||||  |||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||||    
T  40362623 tttttcgtatggttcttaactaaattcacca--tgattttctcaaatc-ataattttctcatagtttgttatat 40362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 43476087 - 43475963
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa----tatatttttagtta 304  Q
    ||||| ||||||||  |||||||||||||||||  |||| |||||||  |||||||||||  ||||| ||||||  ||||||    |||||||||||||     
T  43476087 tttttcgtatggttcttaactaaattcaccatg--atttcctcaaattcataattttctcaaagtttattatatccaaaaaaaatatatatttttagttt 43475990  T
Q  305 agaaccatacaaaaagcacctaaggaa 331  Q
    | |||||||| |||| ||||| |||||    
T  43475989 aaaaccatacgaaaatcacctgaggaa 43475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 20892999 - 20893037
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  20892999 tatttttagttaagaatcatacgaaaagcacctaaggaa 20893037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 24101885 - 24101851
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  24101885 tttagttaagaaccatacgaaaagcacctaaggaa 24101851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 29229424 - 29229505
Alignment:
Q  242 tgattttctcaaatctataattttctctga-gtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaag 320  Q
    |||||| |||||||| |||||||||||  | |||| ||||||  |||||||||  ||||||||||||||||||||| |||||    
T  29229424 tgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaag 29229505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 29342724 - 29342805
Alignment:
Q  242 tgattttctcaaatctataattttctctga-gtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaag 320  Q
    |||||| |||||||| |||||||||||  | |||| ||||||  |||||||||  ||||||||||||||||||||| |||||    
T  29342724 tgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaag 29342805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 22269838 - 22269874
Alignment:
Q  295 tttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaa 22269874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 319
Target Start/End: Complemental strand, 37341025 - 37340997
Alignment:
Q  291 tatatttttagttaagaaccatacaaaaa 319  Q
    |||||||||||||||||||||||||||||    
T  37341025 tatatttttagttaagaaccatacaaaaa 37340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 1970 - 2092
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa-ta--tatttttagttaag 306  Q
    |||||||||||||  |||||||||||||||||  |||| |||||||| ||||||||| |  |||||||||||| ||||||| ||  ||||||||||||||    
T  1970 tttttgtatggttcttaactaaattcaccatg--atttcctcaaatccataattttcacaaagtttgttatatctaaaaaaatacgtatttttagttaag 2067  T
Q  307 aaccatacaaaaagcacctaaggaa 331  Q
    ||||||| |||||||||||||||||    
T  2068 aaccatataaaaagcacctaaggaa 2092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 327
Target Start/End: Complemental strand, 1992 - 1962
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||||||||||||||||||||||||||||    
T  1992 tttagttaagaaccatacaaaaagcacctaa 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 8364676 - 8364782
Alignment:
Q  225 taactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa--tatatttttagttaagaaccatacaaaaagca 322  Q
    |||||||||||||||||  ||||||| |||| ||||||| ||||  |||||||||| | |||||||  ||||||||||||||||||||||||||||||||    
T  8364676 taactaaattcaccatg--attttcttaaatttataattctctcaaagtttgttatgtctaaaaaaattatatttttagttaagaaccatacaaaaagca 8364773  T
Q  323 cctaaggaa 331  Q
    |||||||||    
T  8364774 cctaaggaa 8364782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 12744993 - 12744849
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  | ||||| ||||| ||| | |||||||||||||||  |||| |||||||  |||||||||||  ||||||||||||    
T  12744993 aaaacttaggtacaattccttaggtgtttttcgtatgatttttgactaaattcaccatg--atttcctcaaattcataattttctcaaagtttgttatat 12744896  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
      |||||||||  |||||||||||| ||||||||||||| |||||||    
T  12744895 ccaaaaaatatgtatttttagttaaaaaccatacaaaaaacacctaa 12744849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 331
Target Start/End: Original strand, 33629349 - 33629499
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||| |  |||| ||||||||  ||||||||||||| |||  ||||||||||||| |||||||||||  ||||||||||||    
T  33629349 aaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaattcactatg--attttctcaaatccataattttctcaaagtttgttatat 33629446  T
Q  283 ataaaaa----atatatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||    ||||||||||||||||||| ||||| |||| || ||||||||    
T  33629447 ccaaaaaatatatatatttttagttaagaatcatacgaaaaacatctaaggaa 33629499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 331
Target Start/End: Original strand, 24397278 - 24397398
Alignment:
Q  211 ttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaaga 307  Q
    ||||||||||||  |||||||||||||    |||||| |||||||| |||||||||||  ||||||||||||  ||||||   | |||||||||||||||    
T  24397278 ttttgtatggttcttaactaaattcaca---tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaaga 24397374  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    ||||||| ||||||||||||||||    
T  24397375 accatacgaaaagcacctaaggaa 24397398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 1138699 - 1138585
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    |||| ||||||||  ||||||||||||  |||  ||||||||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||||||||    
T  1138699 ttttcgtatggttcttaactaaattcattatg--attttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 1138602  T
Q  308 accatacaaaaagcacc 324  Q
    ||||||| |||||||||    
T  1138601 accatacgaaaagcacc 1138585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 328
Target Start/End: Original strand, 13754295 - 13754440
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||| | ||||| ||||| ||  ||||||||||||||||   |||| |||||||  |||||||||||  |||||| |||||    
T  13754295 aaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaattcaccata--atttcctcaaattcataattttctcaaagtttgctatat 13754392  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaag 328  Q
      |||||||||  ||||||||||||||||||||| |||| ||||||||    
T  13754393 caaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaag 13754440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 21262083 - 21261970
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||||||||  |||||||||||| ||||  |||| |||||||| | |||||||||  ||||||||||||  |||||||||  ||||||||||||||    
T  21262083 tttttgtatggttcttaactaaattcatcatg--atttcctcaaatccacaattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga 21261986  T
Q  308 accatacaaaaagcac 323  Q
    ||||||| ||||||||    
T  21261985 accatacgaaaagcac 21261970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 1456053 - 1456157
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    ||||| ||||||| ||||||||||||||  ||| ||||||||||||| |||||||||||  ||||||||||||  ||||||||  |||||||||| ||||    
T  1456053 tttttatatggttcataactaaattcac--tgtaattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagtcaaga 1456150  T
Q  308 accatac 314  Q
    |||||||    
T  1456151 accatac 1456157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 15855953 - 15855862
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  15855953 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaa 15855862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 16473065 - 16472974
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  16473065 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaa 16472974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 35276322 - 35276441
Alignment:
Q  209 ttttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaa---tatatttttagttaa 305  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||| ||||||||||   ||||| |||||| |||||||   | ||||||||| |||    
T  35276322 ttttttgtatggtttataactaaatttacca--tgattttatcaaatccataattttcttaaagtttattatatctaaaaaaatgtgtatttttaggtaa 35276419  T
Q  306 gaaccatacaaaaagcacctaa 327  Q
    |||| |||||||||||| ||||    
T  35276420 gaactatacaaaaagcatctaa 35276441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 35420673 - 35420764
Alignment:
Q  242 tgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||| |||||||| |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  35420673 tgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaa 35420764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 4266149 - 4266004
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||| ||| || |||||||  | ||||| ||||||||  ||||||||||||||  |||||||  ||||||| ||||||||||   ||||||||| ||    
T  4266149 aaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaattcacc--gtgatttcttcaaatccataattttcttaaagtttgttacat 4266052  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaag 328  Q
      |||||||||  ||||||||||||||||||||| |||| ||||||||    
T  4266051 ccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaag 4266004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 12808078 - 12807933
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  | ||||| ||||| ||  | |||||||||||||||  |||| || ||||| |||||||| ||  ||||||||||||    
T  12808078 aaaacttaggtacaattccttaagtgtttttcgtatgattcttgactaaattcaccatg--atttccttaaatccataattttttcaaagtttgttatat 12807981  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagcacctaag 328  Q
     ||||||||||  |||||||||||| |||||||| |||| ||||||||    
T  12807980 ctaaaaaatatgtatttttagttaaaaaccatacgaaaaacacctaag 12807933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 37655183 - 37655294
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||| ||||  |||||||||||||||||  | || |||||||  |||||||||||  ||||||||||| | |||||||||  ||||||||||||||    
T  37655183 tttttgtacggttcttaactaaattcaccatg--acttcctcaaattcataattttctcaaagtttgttata-acaaaaaatatgtatttttagttaaga 37655279  T
Q  308 accatacaaaaagca 322  Q
    |||||||||||||||    
T  37655280 accatacaaaaagca 37655294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 183 - 322
Target Start/End: Complemental strand, 20476598 - 20476459
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  |  |||| ||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  | ||||||||||    
T  20476598 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaaatttgttatat 20476501  T
Q  283 ataaaaaatat--atttttagttaagaaccatacaaaaagca 322  Q
       ||||||||  ||||||||||||||||||||| |||||||    
T  20476500 cacaaaaatatgtatttttagttaagaaccatacgaaaagca 20476459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 327
Target Start/End: Complemental strand, 35807075 - 35806958
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||||||||   | ||||||||||||||  |||||||||||||| ||||||| |   ||||||||||||  |||||| ||  ||||||||||||||    
T  35807075 tttttgtatggttctaacctaaattcaccatg--attttctcaaatctttaatttttttaaagtttgttatattcaaaaaagatgtatttttagttaaga 35806978  T
Q  308 accatacaaaaagcacctaa 327  Q
    ||||||  ||||||||||||    
T  35806977 accatatgaaaagcacctaa 35806958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 37552339 - 37552451
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaaga 307  Q
    |||||||| ||||  |||||||||||||||||  | || |||||||  |||||||||||  |||||||||||   |||||||||  ||||||||| ||||    
T  37552339 tttttgtacggttcttaactaaattcaccatg--acttcctcaaattcataattttctcaaagtttgttataacaaaaaaatatgtatttttagtcaaga 37552436  T
Q  308 accatacaaaaagca 322  Q
    |||||||||||||||    
T  37552437 accatacaaaaagca 37552451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 21259780 - 21259882
Alignment:
Q  229 taaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcaccta 326  Q
    |||||||||||||  |||| ||||||   |||||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||  ||||| |||||    
T  21259780 taaattcaccatg--atttcctcaaaatcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccataagaaaagtaccta 21259877  T
Q  327 aggaa 331  Q
    |||||    
T  21259878 aggaa 21259882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 43539274 - 43539129
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    |||| |||||| || |||||||  | ||||| |||||||   |||||||||||| |  |||||||||| ||||| |||||||||||  ||||||||||||    
T  43539274 aaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatc--gtgattttcttaaatccataattttctcaaagtttgttatat 43539177  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaag 328  Q
      ||||||||  ||||| ||||| |||||||||| ||||  |||||||    
T  43539176 ccaaaaaatatgtatttatagttcagaaccatacgaaaaatacctaag 43539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 20464053 - 20464018
Alignment:
Q  296 ttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||||||||||||||||    
T  20464053 ttttagttaagaaccatacaaaaagcacctaaggaa 20464018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 328
Target Start/End: Original strand, 780844 - 780941
Alignment:
Q  229 taaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatatatttttagttaagaaccatacaaaaagcacctaag 328  Q
    |||||||||||||  |||| || ||||| ||||||||||   ||||||||||||| |||||| | |   ||| ||||||||||||| |||||||||||||    
T  780844 taaattcaccatg--atttccttaaatccataattttcttaaagtttgttatataaaaaaaaaaaaaaattaattaagaaccatacgaaaagcacctaag 780941  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 10304824 - 10304773
Alignment:
Q  182 caaaacttaggtgcatttccttatatattttttgtatggtttataactaaat 233  Q
    ||||||||||||||| ||||||| || ||||||||||| ||| |||||||||    
T  10304824 caaaacttaggtgcaattccttagatgttttttgtatgatttttaactaaat 10304773  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 15855956 - 15855995
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  15855956 atatttttagttaagaaccatacgaaaagcatctaaggaa 15855995  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 16473068 - 16473107
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  16473068 atatttttagttaagaaccatacgaaaagcatctaaggaa 16473107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 35420670 - 35420631
Alignment:
Q  292 atatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  35420670 atatttttagttaagaaccatacgaaaagcatctaaggaa 35420631  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 20476549 - 20476583
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaa 20476583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 459
Target Start/End: Complemental strand, 22651189 - 22651156
Alignment:
Q  426 atgttcaaataagtttgttatcattaaaacatca 459  Q
    ||||||||||||||||||||||| ||||||||||    
T  22651189 atgttcaaataagtttgttatcaataaaacatca 22651156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 42522900 - 42522968
Alignment:
Q  261 attttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
    ||||||||  |||||||||||| |||| || ||  |||||||||||||||||| ||||||| |||||||    
T  42522900 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaaccaaacaaaaaacacctaa 42522968  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 10132421 - 10132365
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcacca 239  Q
    ||||||||| | || |||||||| | ||||||||||||||  |||||||||||||||    
T  10132421 aaaacttagatacaattccttatgtgttttttgtatggttcttaactaaattcacca 10132365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 12191494 - 12191423
Alignment:
Q  250 tcaaatctataattttctctgagtttgttatatataaaaaatatat--ttttagttaagaaccatacaaaaa 319  Q
    ||||||||||| ||||||   ||||||||||||  ||||||||| |  ||||| ||||||||||||||||||    
T  12191494 tcaaatctatagttttcttaaagtttgttatatccaaaaaatatgtaattttatttaagaaccatacaaaaa 12191423  T

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Target: scaffold0086 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 48293 - 48149
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||| | || ||||||| ||  |||| |||| |||  |||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  48293 aaaacttagatacaattccttagatgcttttcgtatagttcttaactaaattcaccatg--attttctcaaatccataattttctcaaagtttgttatat 48196  T
Q  283 ataaaaaata--tatttttagttaagaaccatacaaaaagcacctaa 327  Q
      ||||||||  |||||||| |||| |||||||| ||||||||||||    
T  48195 ccaaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaa 48149  T

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Target: scaffold0137 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 10236 - 10135
Alignment:
Q  229 taaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaa-atatatttttagttaagaaccatacaaaaagcacctaa 327  Q
    |||||||||||||  ||||||||| ||| |||||||||||  ||||||||||||  ||||| |||||||||||||||||||||||||  ||| |||||||    
T  10236 taaattcaccatg--attttctcacatccataattttctcaaagtttgttatatccaaaaatatatatttttagttaagaaccatacgcaaaacacctaa 10139  T
Q  328 ggaa 331  Q
    ||||    
T  10138 ggaa 10135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 331
Target Start/End: Complemental strand, 51230 - 51082
Alignment:
Q  183 aaaacttaggtgcatttccttatatattttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatat 282  Q
    ||||||||||| || |||||||  || ||||  |||||||  ||||||||||||| |||  |||| || ||||  |||||||||||  ||||||||||||    
T  51230 aaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatg--atttccttaaattcataattttctcaaagtttgttatat 51133  T
Q  283 ataaaaaatatat--ttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
      |||||||||||  ||||||||||||||||||| ||||| ||||||||||    
T  51132 ccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaa 51082  T

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Target: scaffold0653 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 327
Target Start/End: Original strand, 3424 - 3541
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaata--tatttttagttaaga 307  Q
    |||||||||||||  ||| |||||||||||||  |||| ||||||| ||||||||| ||  ||||||||||||  ||||||||  |||||||| ||||||    
T  3424 tttttgtatggttcttaattaaattcaccatg--atttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaaga 3521  T
Q  308 accatacaaaaagcacctaa 327  Q
    ||||||| ||||| ||||||    
T  3522 accatacgaaaagtacctaa 3541  T

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Target: scaffold0188 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 7226 - 7105
Alignment:
Q  210 tttttgtatggtttataactaaattcaccatgtgattttctcaaatctataattttctctgagtttgttatatataaaaaatatat--ttttagttaaga 307  Q
    |||| ||||||||  |||||||||||| ||||  |||| |||||||| |||||||||||  ||||||||||||  |||| ||||||  ||||||||||||    
T  7226 ttttcgtatggttcttaactaaattcatcatg--atttcctcaaatccataattttctcaaagtttgttatatccaaaatatatatatttttagttaaga 7129  T
Q  308 accatacaaaaagcacctaaggaa 331  Q
    | ||||| |||| |||||||||||    
T  7128 atcatacgaaaaacacctaaggaa 7105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 7204 - 7238
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    |||||||||||||||||| ||||||||||||||||    
T  7204 tttagttaagaaccatacgaaaagcacctaaggaa 7238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 72348 - 72444
Alignment:
Q  258 ataattttctctgagtttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaaggaaatacac-aagttttttccttt 351  Q
    ||||||||||| |||||||||||||  |||||||||  |||||||||||| |||||||| |||||||| ||||||| | ||| ||||||| ||||||    
T  72348 ataattttctcagagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagcacttaaggaattgcactaagttttctccttt 72444  T

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Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 57879 - 57827
Alignment:
Q  109 caaaaataacaatcgacatggaacacacatatacgaaagaaatatagtagaaag 162  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  57879 caaaaataacattcgacatggaacacacatata-gaaagaattatagtagaaag 57827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 5780 - 5724
Alignment:
Q  273 tttgttatatataaaaaatat--atttttagttaagaaccatacaaaaagcacctaa 327  Q
    ||||||||||  |||||||||  ||||||||||||||||||||| ||||||||||||    
T  5780 tttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaa 5724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 5823 - 5858
Alignment:
Q  297 tttagttaagaaccatacaaaaagcacctaaggaaa 332  Q
    |||||||||||||||||| |||||||||||||||||    
T  5823 tttagttaagaaccatacgaaaagcacctaaggaaa 5858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 26462 - 26424
Alignment:
Q  293 tatttttagttaagaaccatacaaaaagcacctaaggaa 331  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  26462 tatttttagttaataaccatacgaaaagcacctaaggaa 26424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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