View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2197_low_10 (Length: 345)

Name: NF2197_low_10
Description: NF2197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2197_low_10
NF2197_low_10
[»] chr3 (31 HSPs)
chr3 (1-328)||(45272575-45272902)
chr3 (1-46)||(30807312-30807357)
chr3 (1-46)||(35492904-35492949)
chr3 (1-46)||(46576341-46576386)
chr3 (1-45)||(30257618-30257662)
chr3 (1-45)||(34492734-34492778)
chr3 (1-45)||(45529913-45529957)
chr3 (1-43)||(53424335-53424377)
chr3 (1-46)||(21362936-21362981)
chr3 (1-46)||(40940818-40940863)
chr3 (1-45)||(4252555-4252599)
chr3 (1-45)||(8456309-8456353)
chr3 (1-45)||(25289873-25289917)
chr3 (1-45)||(31537997-31538041)
chr3 (1-45)||(40133608-40133652)
chr3 (1-45)||(48977382-48977426)
chr3 (1-45)||(50582986-50583030)
chr3 (1-40)||(25379760-25379799)
chr3 (1-44)||(52455808-52455851)
chr3 (1-46)||(4462626-4462671)
chr3 (5-46)||(49258425-49258466)
chr3 (1-45)||(7485684-7485728)
chr3 (1-45)||(9842915-9842959)
chr3 (1-45)||(18177046-18177090)
chr3 (1-42)||(25344216-25344257)
chr3 (1-38)||(26174114-26174151)
chr3 (1-46)||(32151418-32151462)
chr3 (1-45)||(7470374-7470418)
chr3 (1-45)||(15566658-15566701)
chr3 (1-45)||(19857047-19857089)
chr3 (1-45)||(55287797-55287841)
[»] chr6 (20 HSPs)
chr6 (1-46)||(33499467-33499512)
chr6 (1-46)||(22576060-22576105)
chr6 (1-46)||(34147339-34147384)
chr6 (1-46)||(34159955-34160000)
chr6 (1-45)||(5360230-5360274)
chr6 (1-45)||(9238969-9239013)
chr6 (1-45)||(12591631-12591675)
chr6 (1-45)||(15360257-15360301)
chr6 (1-47)||(21148669-21148715)
chr6 (5-46)||(3222797-3222838)
chr6 (1-45)||(13753234-13753278)
chr6 (1-43)||(8479308-8479350)
chr6 (1-39)||(11448871-11448909)
chr6 (5-43)||(21982483-21982521)
chr6 (1-47)||(28672059-28672105)
chr6 (1-42)||(9843935-9843976)
chr6 (1-46)||(11007158-11007203)
chr6 (1-46)||(9208245-9208290)
chr6 (1-45)||(654305-654349)
chr6 (1-45)||(33718617-33718661)
[»] chr5 (33 HSPs)
chr5 (1-48)||(13108608-13108655)
chr5 (1-46)||(32059599-32059644)
chr5 (1-45)||(22392695-22392739)
chr5 (1-45)||(23270681-23270725)
chr5 (1-45)||(25586926-25586970)
chr5 (1-48)||(13038613-13038660)
chr5 (1-47)||(4603769-4603815)
chr5 (1-47)||(33025472-33025518)
chr5 (1-42)||(8484820-8484861)
chr5 (1-46)||(11926661-11926706)
chr5 (1-46)||(15641264-15641309)
chr5 (1-42)||(38631120-38631161)
chr5 (1-45)||(12317309-12317353)
chr5 (1-45)||(15931053-15931097)
chr5 (1-45)||(31288105-31288149)
chr5 (1-44)||(36954813-36954856)
chr5 (1-43)||(19145570-19145612)
chr5 (1-51)||(33709660-33709709)
chr5 (1-46)||(1827689-1827734)
chr5 (1-42)||(25750770-25750811)
chr5 (1-46)||(27498890-27498935)
chr5 (1-45)||(3715068-3715112)
chr5 (1-45)||(7085785-7085829)
chr5 (1-45)||(30485822-30485866)
chr5 (1-45)||(34049816-34049860)
chr5 (1-45)||(34310136-34310180)
chr5 (1-41)||(15971281-15971321)
chr5 (1-45)||(19230469-19230513)
chr5 (6-42)||(22253309-22253345)
chr5 (3-47)||(25343231-25343275)
chr5 (1-45)||(37397707-37397751)
chr5 (1-45)||(38684202-38684246)
chr5 (1-41)||(42006791-42006831)
[»] chr8 (22 HSPs)
chr8 (1-47)||(4718641-4718687)
chr8 (1-45)||(2618184-2618228)
chr8 (1-45)||(3734782-3734826)
chr8 (1-45)||(18532105-18532149)
chr8 (1-45)||(34237814-34237858)
chr8 (1-44)||(19471608-19471651)
chr8 (1-44)||(19542532-19542575)
chr8 (1-44)||(19590121-19590164)
chr8 (1-44)||(42328004-42328047)
chr8 (1-46)||(20305905-20305950)
chr8 (1-46)||(21092538-21092583)
chr8 (1-46)||(28193471-28193516)
chr8 (1-46)||(42643277-42643322)
chr8 (1-45)||(39349254-39349298)
chr8 (1-42)||(27746494-27746535)
chr8 (1-45)||(7558102-7558146)
chr8 (1-45)||(26169007-26169051)
chr8 (1-42)||(8042655-8042696)
chr8 (1-42)||(34639365-34639406)
chr8 (1-45)||(28088284-28088328)
chr8 (1-45)||(32879277-32879321)
chr8 (1-37)||(41070767-41070803)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-46)||(8566-8611)
[»] chr7 (35 HSPs)
chr7 (1-46)||(18044104-18044149)
chr7 (1-50)||(40543069-40543118)
chr7 (1-45)||(2344297-2344341)
chr7 (1-45)||(2751269-2751313)
chr7 (1-45)||(7176021-7176065)
chr7 (1-45)||(7275275-7275319)
chr7 (1-45)||(21217992-21218036)
chr7 (1-45)||(23854394-23854438)
chr7 (1-44)||(2103054-2103097)
chr7 (1-48)||(10091183-10091230)
chr7 (1-46)||(27009356-27009401)
chr7 (1-46)||(27312149-27312194)
chr7 (1-41)||(13332582-13332622)
chr7 (1-45)||(17212051-17212095)
chr7 (1-45)||(21370595-21370639)
chr7 (1-41)||(22119890-22119930)
chr7 (1-45)||(25333417-25333461)
chr7 (1-45)||(31197589-31197633)
chr7 (1-45)||(31713054-31713098)
chr7 (1-44)||(7799991-7800034)
chr7 (1-42)||(12211694-12211735)
chr7 (1-42)||(28089817-28089858)
chr7 (1-45)||(11997847-11997891)
chr7 (1-45)||(32849589-32849633)
chr7 (1-45)||(42913672-42913716)
chr7 (1-44)||(19421230-19421273)
chr7 (1-44)||(21574262-21574305)
chr7 (1-47)||(39145811-39145857)
chr7 (1-42)||(8435854-8435895)
chr7 (1-46)||(17197109-17197154)
chr7 (1-42)||(21835152-21835193)
chr7 (1-41)||(577681-577721)
chr7 (1-41)||(23012667-23012707)
chr7 (1-41)||(28003838-28003878)
chr7 (1-45)||(28646967-28647011)
[»] chr2 (19 HSPs)
chr2 (1-50)||(18976584-18976633)
chr2 (1-44)||(8192510-8192553)
chr2 (2-45)||(33827733-33827776)
chr2 (1-46)||(11941369-11941414)
chr2 (1-45)||(44946212-44946256)
chr2 (4-46)||(24195997-24196039)
chr2 (1-47)||(30466989-30467035)
chr2 (4-41)||(44976316-44976353)
chr2 (1-45)||(15037953-15037997)
chr2 (6-46)||(20297556-20297596)
chr2 (1-45)||(27269509-27269553)
chr2 (1-45)||(32845085-32845129)
chr2 (7-45)||(36390731-36390769)
chr2 (5-42)||(4567600-4567637)
chr2 (1-46)||(6714440-6714485)
chr2 (1-46)||(41313985-41314030)
chr2 (1-37)||(4618844-4618880)
chr2 (1-41)||(17324764-17324804)
chr2 (1-45)||(25293160-25293204)
[»] chr1 (31 HSPs)
chr1 (1-46)||(8077640-8077685)
chr1 (1-46)||(24674386-24674431)
chr1 (1-45)||(4621396-4621440)
chr1 (1-45)||(7197405-7197449)
chr1 (1-45)||(34778336-34778380)
chr1 (1-46)||(27455025-27455070)
chr1 (1-45)||(14258586-14258630)
chr1 (1-45)||(15059561-15059605)
chr1 (1-45)||(29057496-29057540)
chr1 (1-45)||(32729539-32729583)
chr1 (1-45)||(46607804-46607848)
chr1 (1-45)||(47091684-47091728)
chr1 (1-44)||(1486415-1486458)
chr1 (1-43)||(1818730-1818772)
chr1 (1-46)||(1138572-1138617)
chr1 (6-47)||(2537696-2537737)
chr1 (1-46)||(7766886-7766931)
chr1 (1-45)||(168195-168239)
chr1 (1-40)||(1095154-1095193)
chr1 (1-44)||(24216973-24217016)
chr1 (1-40)||(46113561-46113600)
chr1 (4-46)||(24122016-24122058)
chr1 (1-46)||(809215-809260)
chr1 (1-46)||(40802226-40802271)
chr1 (1-42)||(52135127-52135168)
chr1 (1-41)||(2272342-2272382)
chr1 (1-45)||(6776139-6776182)
chr1 (1-45)||(20487349-20487393)
chr1 (5-45)||(23232428-23232468)
chr1 (2-46)||(25496648-25496692)
chr1 (1-45)||(30677170-30677214)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-45)||(5241-5285)
[»] chr4 (27 HSPs)
chr4 (1-45)||(5609361-5609405)
chr4 (1-45)||(25852208-25852252)
chr4 (1-45)||(32986191-32986235)
chr4 (1-45)||(40059011-40059055)
chr4 (1-45)||(46714386-46714430)
chr4 (1-45)||(54127501-54127545)
chr4 (1-46)||(19660691-19660736)
chr4 (1-42)||(20566346-20566387)
chr4 (1-46)||(33696438-33696483)
chr4 (1-45)||(1985830-1985874)
chr4 (1-45)||(22625229-22625273)
chr4 (1-45)||(35674900-35674944)
chr4 (1-45)||(52983613-52983657)
chr4 (1-44)||(13873454-13873497)
chr4 (1-48)||(41621755-41621802)
chr4 (5-45)||(13771646-13771686)
chr4 (1-45)||(27528954-27528998)
chr4 (1-45)||(34722164-34722208)
chr4 (1-45)||(34844917-34844961)
chr4 (1-35)||(35229172-35229206)
chr4 (3-41)||(45787864-45787902)
chr4 (1-39)||(55961901-55961939)
chr4 (1-46)||(36131669-36131714)
chr4 (1-45)||(33992620-33992664)
chr4 (1-41)||(34835527-34835567)
chr4 (1-41)||(42245744-42245784)
chr4 (1-41)||(51535611-51535651)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-46)||(41803-41848)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-41)||(1215-1255)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-41)||(10852-10892)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-41)||(9458-9498)
scaffold0366 (1-41)||(12159-12199)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-45)||(14985-15029)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-45)||(40319-40363)
[»] scaffold0026 (1 HSPs)
scaffold0026 (5-45)||(97529-97569)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-44)||(53030-53073)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-45)||(7468-7512)
[»] scaffold0200 (1 HSPs)
scaffold0200 (1-45)||(26702-26746)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-45)||(66756-66800)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-48)||(12913-12960)
[»] scaffold0460 (1 HSPs)
scaffold0460 (1-45)||(8338-8382)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-45)||(27770-27814)


Alignment Details
Target: chr3 (Bit Score: 300; Significance: 1e-169; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 45272575 - 45272902
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttacattgcctcacgcttataactaaacataaagattatagggtagggaaatcaatc 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  45272575 actccaagatcccaagccaacgactaggccaaccccaaatgggttacattgcctcatgcttataactaaacatatagattatagggtagggaaatcaatc 45272674  T
Q  101 aaatgaactgaaaacgatttaattacctcgtttgagttgtcagtgttctctgattcagatgtcgcactttcatcactttcacaactgtgtgacttgtagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45272675 aaatgaactgaaaacgatttaattacctcgtttgagttgtcagtgttctctgattcagatgtcacactttcatcactttcacaactgtgtgacttgtagt 45272774  T
Q  201 gcacgacaataggttcatcctctttctcaccttgttgtttgtcatttacacgcttgtcacgtaatgcttgctcttttctctccgtggcctcaatgtaata 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  45272775 gcacgacaataggttcatcctctttctcaccttgttgtttgtcatttacacgcgtatcacgtaatgcttgctcttttctctccgtggcctcaatgtaata 45272874  T
Q  301 tattctaaaacttggcgatccaggacct 328  Q
    ||||||||||||||||||||||||||||    
T  45272875 tattctaaaacttggcgatccaggacct 45272902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30807312 - 30807357
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  30807312 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 30807357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35492949 - 35492904
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  35492949 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 35492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46576386 - 46576341
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  46576386 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 46576341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30257662 - 30257618
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  30257662 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 30257618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34492734 - 34492778
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  34492734 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 34492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45529913 - 45529957
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  45529913 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 45529957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 53424335 - 53424377
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatggg 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  53424335 actccaagatcccaagccaaccactaggccaaccccaaatggg 53424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21362981 - 21362936
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  21362981 actccaagatcccaagtcaaccactaggccaaccccaaatgggtta 21362936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40940863 - 40940818
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  40940863 actccaagatcccaagccaaccactagaccaaccccaaatgggtta 40940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4252555 - 4252599
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  4252555 actccaagatctcaagccaaccactaggccaaccccaaatgggtt 4252599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8456309 - 8456353
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  8456309 actcgaagatcccaagccaaccactaggccaaccccaaatgggtt 8456353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25289873 - 25289917
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  25289873 actccaagatcccaagccaaccactagaccaaccccaaatgggtt 25289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31537997 - 31538041
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||    
T  31537997 actccaagatcctaagccaaccactaggccaaccccaaatgggtt 31538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40133608 - 40133652
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  40133608 actccaaaatcccaagccaaccactaggccaaccccaaatgggtt 40133652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48977426 - 48977382
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  48977426 actccaagatcccaagtcaaccactaggccaaccccaaatgggtt 48977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50583030 - 50582986
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  50583030 actccaagatcccaaaccaaccactaggccaaccccaaatgggtt 50582986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25379799 - 25379760
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  25379799 actccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52455808 - 52455851
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  52455808 actccaagatccctagccaaccactaggccaaccccaaatgggt 52455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4462671 - 4462626
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||    
T  4462671 actccaagatctcaagccaaccactaggccaaccccaaatgagtta 4462626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 49258425 - 49258466
Alignment:
Q  5 caagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  49258425 caagatcccaagccaaccactaggcaaaccccaaatgggtta 49258466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7485684 - 7485728
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||    
T  7485684 actccaagatcccaagtcaaccactatgccaaccccaaatgggtt 7485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9842959 - 9842915
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| || |||||||||||||||||    
T  9842959 actccaagatcccaaaccaaccactagaccaaccccaaatgggtt 9842915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18177046 - 18177090
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  18177046 actccaagatctcaagtcaaccactaggccaaccccaaatgggtt 18177090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25344216 - 25344257
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||| ||||||||||| ||||||| |||||||||||||||||    
T  25344216 actcgaagatcccaagtcaaccactaggccaaccccaaatgg 25344257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26174151 - 26174114
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaa 38  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  26174151 actccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32151462 - 32151418
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||    
T  32151462 actccaagatcccaagtcaaccactaggccaa-cccaaatgggtta 32151418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7470374 - 7470418
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| |||| ||||||| |||| |||||||||||||||    
T  7470374 actccaagatctcaagtcaaccactaggcaaaccccaaatgggtt 7470418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15566658 - 15566701
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  15566658 actccaagatctcaagccaaccactaggccaa-cccaaatgggtt 15566701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19857089 - 19857047
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||    
T  19857089 actccaagatcc-aagccaaccaccaggccaa-cccaaatgggtt 19857047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 55287841 - 55287797
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||| ||||| ||||||||||||| | ||||||||||||||||||    
T  55287841 actctaagattccaagccaaccactatgccaaccccaaatgggtt 55287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33499512 - 33499467
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33499512 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 33499467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22576105 - 22576060
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  22576105 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 22576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34147384 - 34147339
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  34147384 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 34147339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34160000 - 34159955
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  34160000 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 34159955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5360230 - 5360274
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  5360230 actccaagatcccaagccaaccaccaggccaactccaaatgggtt 5360274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9239013 - 9238969
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  9239013 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 9238969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12591675 - 12591631
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  12591675 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 12591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15360257 - 15360301
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  15360257 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 15360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21148669 - 21148715
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||    
T  21148669 actccaagatcccaagccaaccactaggccaactccaaatgggttac 21148715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 3222797 - 3222838
Alignment:
Q  5 caagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  3222797 caagatcccaagccaaccactaggccaaccccaaatgggtta 3222838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13753278 - 13753234
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||    
T  13753278 actccaagatccaaagccaaccactaggccaaccccaaatgggtt 13753234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8479350 - 8479308
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatggg 43  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  8479350 actccaagatcccaagtcaaccactaggccaaccccaaatggg 8479308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11448909 - 11448871
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  11448909 actccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 21982483 - 21982521
Alignment:
Q  5 caagatcccaagccaaccaccaggccaaccccaaatggg 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21982483 caagatcccaagccaaccactaggccaaccccaaatggg 21982521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28672105 - 28672059
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  28672105 actccaagatctcaagtcaaccactaggccaaccccaaatgggttac 28672059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9843976 - 9843935
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  9843976 actccaagatcccaagccaaccactagaccaaccccaaatgg 9843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11007203 - 11007158
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||    
T  11007203 actccaagatcccaagccaaccactagatcaaccccaaatgggtta 11007158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9208290 - 9208245
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||| |||||||| ||  |||||||||||||||||    
T  9208290 actccaagatcccaatccaaccactagaacaaccccaaatgggtta 9208245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 654305 - 654349
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| || |||| ||||||| ||||||||||||    
T  654305 actccaagatcccaagtcagccactaggccaaacccaaatgggtt 654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33718617 - 33718661
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| || ||||||| |||||||||    
T  33718617 actccaagatcccaaaccaaccactagaccaaccctaaatgggtt 33718661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13108608 - 13108655
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttaca 48  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13108608 actccaagatcccaagccaaccactaggccaaccccaaatgggttaca 13108655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32059599 - 32059644
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  32059599 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 32059644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22392739 - 22392695
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  22392739 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 22392695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23270681 - 23270725
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  23270681 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 23270725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25586970 - 25586926
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  25586970 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 25586926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13038613 - 13038660
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttaca 48  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  13038613 actccaagatcccaaaccaaccactaggccaaccccaaatgggttaca 13038660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4603815 - 4603769
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  4603815 actccaagatcccaagccaaccactaggccaaccccaaatggattac 4603769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33025518 - 33025472
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||    
T  33025518 actccaagatcccaagccaaccgcgaggccaaccccaaatgggttac 33025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8484820 - 8484861
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8484820 actccaagatcccaagccaaccactaggccaaccccaaatgg 8484861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11926661 - 11926706
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||    
T  11926661 actccaagatcccaaaccaaccactaggccaaccccaaatgggtta 11926706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15641264 - 15641309
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  15641264 actccaagatcccaagccaaccactaggctaaccccaaatgggtta 15641309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38631120 - 38631161
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  38631120 actccaagatcccaagccaaccactaggccaaccccaaatgg 38631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12317309 - 12317353
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  12317309 actccaagattccaagccaaccactaggccaaccccaaatgggtt 12317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15931097 - 15931053
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  15931097 actccaagatcccaagctaaccactaggccaaccccaaatgggtt 15931053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31288105 - 31288149
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  31288105 actccaagatcccaagccaaccactaggccaacccaaaatgggtt 31288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36954856 - 36954813
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  36954856 actccaagatcccaaggcaaccactaggccaaccccaaatgggt 36954813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19145570 - 19145612
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatggg 43  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  19145570 actccaagatcccaagtcaaccactaggccaaccccaaatggg 19145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33709660 - 33709709
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttacattg 51  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  33709660 actccaagatcccaagccaaccactaggccaa-cccaaatgggttaaattg 33709709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1827689 - 1827734
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||    
T  1827689 actccaagatctcaagccaaccactaggtcaaccccaaatgggtta 1827734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25750770 - 25750811
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  25750770 actccaagatcccaagtcaaccactaggccaaccccaaatgg 25750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27498890 - 27498935
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  27498890 actccaagattccaagccaaccactaggtcaaccccaaatgggtta 27498935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3715068 - 3715112
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||    
T  3715068 actccaagatcccaaaccaaccactaggccaaccccaaattggtt 3715112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7085785 - 7085829
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| | |||| |||||||||||||    
T  7085785 actccaagatcccaagccaaccactaagccagccccaaatgggtt 7085829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30485866 - 30485822
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||| |  |||||||||||||||||||    
T  30485866 actccaagatcccaagccaaccgctgggccaaccccaaatgggtt 30485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34049860 - 34049816
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||||||| || || |||||||||||||||||    
T  34049860 actccaagatcccaagccaactactagcccaaccccaaatgggtt 34049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34310180 - 34310136
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||    
T  34310180 actccaagattccaagccgaccactaggccaaccccaaatgggtt 34310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15971281 - 15971321
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| | |||||||| |||||    
T  15971281 actccaagatcccaagccaaccactaagccaaccctaaatg 15971321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19230513 - 19230469
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| | |||||| ||||||||||||| ||||||    
T  19230513 actccaagatcccaaactaaccactaggccaaccccaattgggtt 19230469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 22253309 - 22253345
Alignment:
Q  6 aagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    ||||||||||||||||||| || ||||||||||||||    
T  22253309 aagatcccaagccaaccactagaccaaccccaaatgg 22253345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 25343275 - 25343231
Alignment:
Q  3 tccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    ||||||||  |||| ||||||| ||||||||||||||||||||||    
T  25343275 tccaagatttcaagtcaaccactaggccaaccccaaatgggttac 25343231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37397751 - 37397707
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| |||||||||||| || |||||||||||| ||||    
T  37397751 actccaagatcacaagccaaccactagaccaaccccaaataggtt 37397707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38684246 - 38684202
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| |||||||  |||||||||||| ||||||    
T  38684246 actccaagatcccaagtcaaccactgggccaaccccaagtgggtt 38684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42006831 - 42006791
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    ||||||||||| |||||||||||| || |||||||||||||    
T  42006831 actccaagatctcaagccaaccactagcccaaccccaaatg 42006791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4718687 - 4718641
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  4718687 actccaagatcccaagccaaccactaggccaaccccaaatgggttac 4718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2618228 - 2618184
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  2618228 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 2618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3734782 - 3734826
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  3734782 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 3734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18532149 - 18532105
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  18532149 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 18532105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34237814 - 34237858
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  34237814 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 34237858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19471651 - 19471608
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19471651 actccaagatcccaagccaaccactaggccaaccccaaatgggt 19471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19542575 - 19542532
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19542575 actccaagatcccaagccaaccactaggccaaccccaaatgggt 19542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19590121 - 19590164
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19590121 actccaagatcccaagccaaccactaggccaaccccaaatgggt 19590164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42328047 - 42328004
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  42328047 actccaagatcccaagccaaccactaggccaaccccaaatgggt 42328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20305950 - 20305905
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  20305950 actctaagatcccaagccaaccactaggccaaccccaaatgggtta 20305905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21092583 - 21092538
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  21092583 actctaagatcccaagccaaccactaggccaaccccaaatgggtta 21092538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28193516 - 28193471
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||    
T  28193516 actccaagatcccaagccaaccactaggccaaccccaaataggtta 28193471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42643277 - 42643322
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  42643277 actccaagatcccaagtcaaccactaggccaaccccaaatgggtta 42643322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39349298 - 39349254
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  39349298 actccaagatcccaagccaaccactgggccaaccccaaatgggtt 39349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27746494 - 27746535
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  27746494 actccaagatcccaaaccaaccactaggccaaccccaaatgg 27746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7558102 - 7558146
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||    
T  7558102 actccaagatcccaagctaactactaggccaaccccaaatgggtt 7558146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26169007 - 26169051
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||    
T  26169007 actccaagatcccaagcaaaccactaggccaaccctaaatgggtt 26169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8042696 - 8042655
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||||||| ||| ||| |||||||||||||    
T  8042696 actccaagatcccaagccaagcactaggtcaaccccaaatgg 8042655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34639365 - 34639406
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||||||||||| || | ||||||||||||    
T  34639365 actccaagatcccaagccaaccactagactaaccccaaatgg 34639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28088328 - 28088284
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| ||||||| | |||||||||| |||||||    
T  28088328 actccaagatcccaagtcaaccactaagccaaccccagatgggtt 28088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32879321 - 32879277
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||| ||||||||||| ||||||| || |||||||||||||||||    
T  32879321 actcgaagatcccaagtcaaccactagaccaaccccaaatgggtt 32879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41070803 - 41070767
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaacccca 37  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  41070803 actccaagatcccaagtcaaccactaggccaacccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8566 - 8611
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  8566 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 8611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18044149 - 18044104
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  18044149 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 18044104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40543069 - 40543118
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttacatt 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  40543069 actccaagatcccaagccaaccactaggccaaccccaaatgggttgcatt 40543118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2344341 - 2344297
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  2344341 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 2344297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2751313 - 2751269
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  2751313 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 2751269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7176021 - 7176065
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  7176021 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 7176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7275319 - 7275275
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  7275319 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 7275275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21217992 - 21218036
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  21217992 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 21218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23854438 - 23854394
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  23854438 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 23854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2103097 - 2103054
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  2103097 actccaagatcccaagccaaccactaggccaaccccaaatgggt 2103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10091230 - 10091183
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttaca 48  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  10091230 actccaagatcccaagccaaccactagaccaaccccaaatgggttaca 10091183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27009401 - 27009356
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  27009401 actccaagatccgaagccaaccactaggccaaccccaaatgggtta 27009356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27312194 - 27312149
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||    
T  27312194 actccaagatcccaagccaaccactaggccaaccccaaataggtta 27312149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13332582 - 13332622
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  13332582 actccaagatcccaagccaaccactaggccaaccccaaatg 13332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17212095 - 17212051
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  17212095 actccaagatcccaagccaaccactaagccaaccccaaatgggtt 17212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21370639 - 21370595
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  21370639 actccaagatcccaaaccaaccactaggccaaccccaaatgggtt 21370595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22119930 - 22119890
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  22119930 actccaagatcccaagccaaccactaggccaaccccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25333461 - 25333417
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  25333461 actccaagatcccaagccaaccactaagccaaccccaaatgggtt 25333417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31197633 - 31197589
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  31197633 actccaagatcccaagccaaccactagaccaaccccaaatgggtt 31197589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31713054 - 31713098
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  31713054 actccaagatcccaaaccaaccactaggccaaccccaaatgggtt 31713098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7799991 - 7800034
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  7799991 actccaagatcccaagccaaccactaggtcaaccccaaatgggt 7800034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12211694 - 12211735
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  12211694 actccaagatcctaagccaaccactaggccaaccccaaatgg 12211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28089858 - 28089817
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  28089858 actccaagatctcaagccaaccactaggccaaccccaaatgg 28089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11997891 - 11997847
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| || |||||| ||||||||||    
T  11997891 actccaagatcccaagccaaccactagcccaaccacaaatgggtt 11997847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32849633 - 32849589
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||    
T  32849633 actccaagatcccaagtcaaccactaggctaaccccaaatgggtt 32849589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42913672 - 42913716
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| |||||||||  |||||||||    
T  42913672 actccaagatcccaagccaaccactaggccaaccgaaaatgggtt 42913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19421273 - 19421230
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| | | |||||||||||||||    
T  19421273 actccaagatcccaagccaaccactaagtcaaccccaaatgggt 19421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21574262 - 21574305
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||    
T  21574262 actccaaaatcccaaaccaaccactaggccaaccccaaatgggt 21574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39145811 - 39145857
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    |||||||||||||||| ||||||| ||| ||||| ||||||||||||    
T  39145811 actccaagatcccaagtcaaccactaggtcaacctcaaatgggttac 39145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8435854 - 8435895
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  8435854 actccaagatcccaagtcaaccactagaccaaccccaaatgg 8435895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17197109 - 17197154
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||| ||| |||||||| ||||| |||||||||||||||    
T  17197109 actccaagatcgcaaaccaaccactaggccgaccccaaatgggtta 17197154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21835193 - 21835152
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  21835193 actccaagatcccaagccaaccactaggtcaaccctaaatgg 21835152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 577721 - 577681
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||| |||||||||||| |||||| ||||||||||||||||    
T  577721 actctaagatcccaagcaaaccactaggccaaccccaaatg 577681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23012667 - 23012707
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    ||||||||||||||||||||||||  ||||||||| |||||    
T  23012667 actccaagatcccaagccaaccactgggccaaccctaaatg 23012707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28003878 - 28003838
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| ||  ||||||||||||    
T  28003878 actccaagatcccaagccaaccactagatcaaccccaaatg 28003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28647011 - 28646967
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| ||| ||| ||||||||||||||| ||||    
T  28647011 actccaagatcccaagtcaatcactaggccaaccccaaataggtt 28646967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18976584 - 18976633
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttacatt 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  18976584 actccaagatcccaagccaaccactaggccaaccccaaatgggttgcatt 18976633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8192510 - 8192553
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8192510 actccaagatcccaagccaaccactaggccaaccccaaatgggt 8192553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 33827733 - 33827776
Alignment:
Q  2 ctccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  33827733 ctccaagatcccaagccaaccactaggccaaccccaaatgggtt 33827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11941369 - 11941414
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  11941369 actccaagatcccaagccaaccactagaccaaccccaaatgggtta 11941414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44946212 - 44946256
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  44946212 actccaagatcccaagccaaccactagaccaaccccaaatgggtt 44946256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 24196039 - 24195997
Alignment:
Q  4 ccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  24196039 ccaaaatcccaagccaaccactaggccaaccccaaatgggtta 24195997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30466989 - 30467035
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  30466989 actccaatatcccaaaccaaccactaggccaaccccaaatgggttac 30467035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 44976316 - 44976353
Alignment:
Q  4 ccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  44976316 ccaagatcccaagccaaccactaggccaaccccaaatg 44976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15037997 - 15037953
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||    
T  15037997 actccaagatcccgagtcaaccactaggccaaccccaaatgggtt 15037953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 20297596 - 20297556
Alignment:
Q  6 aagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  20297596 aagatcccaagccaaccactgggccaaccccaaatgggtta 20297556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27269509 - 27269553
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||    
T  27269509 actcgaagatcccaagccaaccactatgccaaccccaaatgggtt 27269553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32845129 - 32845085
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||    
T  32845129 actccaagatcccaagctaactactaggccaaccccaaatgggtt 32845085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 36390731 - 36390769
Alignment:
Q  7 agatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  36390731 agatcccaaaccaaccactaggccaaccccaaatgggtt 36390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 4567600 - 4567637
Alignment:
Q  5 caagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    ||||||||||||||||| || |||||||||||||||||    
T  4567600 caagatcccaagccaactactaggccaaccccaaatgg 4567637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6714440 - 6714485
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||| |||||||||||  ||||||| |||||||||||||    
T  6714440 actccaagatctcaagccaaccattaggccaatcccaaatgggtta 6714485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41314030 - 41313985
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||| |||||||| | | |||||||||||||||||    
T  41314030 actccaagatcccaaaccaaccactacggcaaccccaaatgggtta 41313985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4618844 - 4618880
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaacccca 37  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  4618844 actccaagattccaagccaaccactaggccaacccca 4618880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17324804 - 17324764
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||| |||| |||||||| ||||||||||||||||    
T  17324804 actccaagataccaaaccaaccactaggccaaccccaaatg 17324764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25293204 - 25293160
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||    
T  25293204 actccaagatcccaagtcaaccactagaccaacctcaaatgggtt 25293160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8077685 - 8077640
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  8077685 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 8077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24674431 - 24674386
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  24674431 actccaagatcccaagccaaccactaggccaaccccaaatgggtta 24674386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4621396 - 4621440
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  4621396 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 4621440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7197405 - 7197449
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  7197405 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 7197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34778380 - 34778336
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  34778380 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 34778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27455025 - 27455070
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  27455025 actccaagatcccaagccaaccactagaccaaccccaaatgggtta 27455070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14258586 - 14258630
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  14258586 actccaagatcccaagccaaccactaggccaagcccaaatgggtt 14258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15059561 - 15059605
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  15059561 actccaagattccaagccaaccactaggccaaccccaaatgggtt 15059605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29057496 - 29057540
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  29057496 actccaagatcccaaaccaaccactaggccaaccccaaatgggtt 29057540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32729583 - 32729539
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  32729583 actcgaagatcccaagccaaccactaggccaaccccaaatgggtt 32729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46607848 - 46607804
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  46607848 actccaagatcccaagtcaaccactaggccaaccccaaatgggtt 46607804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47091728 - 47091684
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  47091728 actccaagatctcaagccaaccactaggccaaccccaaatgggtt 47091684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1486458 - 1486415
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  1486458 actccaagatcccaagccaaccactaggtcaaccccaaatgggt 1486415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1818772 - 1818730
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatggg 43  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  1818772 actccaagatcctaagccaactaccaggccaaccccaaatggg 1818730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1138617 - 1138572
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||    
T  1138617 actccaagatctcaagccaaccactaggtcaaccccaaatgggtta 1138572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 2537737 - 2537696
Alignment:
Q  6 aagatcccaagccaaccaccaggccaaccccaaatgggttac 47  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  2537737 aagatcccaatccaaccactaggccaaccccaaatgggttac 2537696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7766886 - 7766931
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||    
T  7766886 actccaagatcccaagctaaccactaggccaaccccgaatgggtta 7766931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 168239 - 168195
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||    
T  168239 actctaagatcccaagccaaccactaggccaactccaaatgggtt 168195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1095154 - 1095193
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaat 40  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  1095154 actccaagatcccaagccaaccactagaccaaccccaaat 1095193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24217016 - 24216973
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||    
T  24217016 actccaagatcccaagtcaaccactaggtcaaccccaaatgggt 24216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 46113561 - 46113600
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  46113561 actccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 24122058 - 24122016
Alignment:
Q  4 ccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||||||||| | |||||||||||||| ||||    
T  24122058 ccaagatcccaagccaaccactaagccaaccccaaatgagtta 24122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 809260 - 809215
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||| |||||||| |||||||||| | ||||||||    
T  809260 actccaagatcccaaaccaaccacgaggccaaccctagatgggtta 809215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40802226 - 40802271
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||| ||| |||||||||||| | |||||||||||||||||||    
T  40802226 actccaatatctcaagccaaccacaaagccaaccccaaatgggtta 40802271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 52135168 - 52135127
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  52135168 actccaagatcccaagtcaaccactagaccaaccccaaatgg 52135127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2272382 - 2272342
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||| ||||||||||| ||||||| ||||||||||||||||    
T  2272382 actctaagatcccaagtcaaccactaggccaaccccaaatg 2272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6776182 - 6776139
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||    
T  6776182 actccaagatcccaaaccaaccactaggccaa-cccaaatgggtt 6776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20487349 - 20487393
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||    
T  20487349 actccaagatcccgagccaaccactaaaccaaccccaaatgggtt 20487393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 23232428 - 23232468
Alignment:
Q  5 caagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||| ||||||| ||||||| ||||||||||||    
T  23232428 caagatcccaagtcaaccactaggccaatcccaaatgggtt 23232468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 25496648 - 25496692
Alignment:
Q  2 ctccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||||||||||||||| ||| |||||||| |||||| |||||    
T  25496648 ctccaagatcccaagccaatcactaggccaacgccaaataggtta 25496692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30677214 - 30677170
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||| ||||||||| |||||||| ||| ||||||||||||||||    
T  30677214 actcctagatcccaaaccaaccactaggtcaaccccaaatgggtt 30677170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5241 - 5285
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  5241 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 5285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5609361 - 5609405
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  5609361 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 5609405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25852252 - 25852208
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  25852252 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 25852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32986235 - 32986191
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  32986235 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 32986191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40059011 - 40059055
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  40059011 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 40059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46714430 - 46714386
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  46714430 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 46714386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54127501 - 54127545
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  54127501 actccaagatcccaagccaaccactaggccaaccccaaatgggtt 54127545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19660691 - 19660736
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  19660691 actccaagatcccaagccaaccactaggccaactccaaatgggtta 19660736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20566387 - 20566346
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgg 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20566387 actccaagatcccaagccaaccactaggccaaccccaaatgg 20566346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33696438 - 33696483
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  33696438 actccaagatcccaagccaaccactaggccaaccctaaatgggtta 33696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1985874 - 1985830
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  1985874 actccaagatcccaagccaaccactaggccaatcccaaatgggtt 1985830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22625229 - 22625273
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  22625229 actccaagatcccaagccaaccactaggccaacctcaaatgggtt 22625273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35674900 - 35674944
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  35674900 actccaagatcccaagccaaccacttggccaaccccaaatgggtt 35674944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52983657 - 52983613
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  52983657 actccaagatctcaagccaaccactaggccaaccccaaatgggtt 52983613  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13873454 - 13873497
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  13873454 actccaagatcccaagcaaaccactaggccaaccccaaatgggt 13873497  T

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Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41621755 - 41621802
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttaca 48  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||    
T  41621755 actccaagatctcaagccaaccattaggccaaccccaaatgggttaca 41621802  T

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Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 13771646 - 13771686
Alignment:
Q  5 caagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  13771646 caagatcccaagccaaccatcagaccaaccccaaatgggtt 13771686  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27528954 - 27528998
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| | |||||||||| |||||||    
T  27528954 actccaagatcccaagccaaccactaagccaaccccagatgggtt 27528998  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34722208 - 34722164
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||    
T  34722208 actccaagatcccaagccaaccactaagccaaccccaaataggtt 34722164  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34844917 - 34844961
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  34844917 actccaagatctcaagcaaaccactaggccaaccccaaatgggtt 34844961  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 35229206 - 35229172
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccc 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  35229206 actccaagatcccaagccaaccactaggccaaccc 35229172  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 45787864 - 45787902
Alignment:
Q  3 tccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  45787864 tccaagattccaagccaaccactaggccaaccccaaatg 45787902  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 55961901 - 55961939
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaa 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  55961901 actccaagatcccaagccaaccactaggccaatcccaaa 55961939  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36131669 - 36131714
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    ||||||| ||||||||| |||||| | |||||||||||||||||||    
T  36131669 actccaaaatcccaagcaaaccactatgccaaccccaaatgggtta 36131714  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33992664 - 33992620
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||| |||||||| ||| |||||| |||||||||    
T  33992664 actccaagatcccaaaccaaccactaggtcaaccctaaatgggtt 33992620  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34835567 - 34835527
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||| ||||||||||||||||||| || |||||||||||||    
T  34835567 actctaagatcccaagccaaccactagaccaaccccaaatg 34835527  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42245784 - 42245744
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||| ||||||||||| ||||||| ||||||||||||||||    
T  42245784 actctaagatcccaagtcaaccactaggccaaccccaaatg 42245744  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51535651 - 51535611
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  51535651 actccaagatcccaagtcaaccactaggccaaccctaaatg 51535611  T

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Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41803 - 41848
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtta 46  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  41803 actccaagatcccaagtcaaccactaggccaaccccaaatgggtta 41848  T

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Target: scaffold0623 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1215 - 1255
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  1215 actccaagatcccaagccaaccactaggccaaccccaaatg 1255  T

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Target: scaffold0459 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10852 - 10892
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  10852 actccaagatcccaagccaaccactaggccaaccccaaatg 10892  T

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Target: scaffold0366 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9458 - 9498
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  9458 actccaagatcccaagccaaccactaggccaaccccaaatg 9498  T

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Target: scaffold0366; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12159 - 12199
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatg 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  12159 actccaagatcccaagccaaccactaggccaaccccaaatg 12199  T

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Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15029 - 14985
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  15029 actccaagatcccaggccaaccactaggccaaccccaaatgggtt 14985  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40363 - 40319
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||    
T  40363 actccaagatcctaagccaaccactaggccaaccccaaatgggtt 40319  T

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Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 97529 - 97569
Alignment:
Q  5 caagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  97529 caagatcccaagccaaccactaggccaaccccaaatgggtt 97569  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53030 - 53073
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggt 44  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  53030 actccaagatcccaagccaaccactaggccaatcccaaatgggt 53073  T

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Target: scaffold0217 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7468 - 7512
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  7468 actccaagatcccaagccaactactaggccaaccccaaataggtt 7512  T

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Target: scaffold0200 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26702 - 26746
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||    
T  26702 actccaagatcctaagccaaccagtaggccaaccccaaatgggtt 26746  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 66800 - 66756
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    |||||||||||||||||||||||| || |||| ||||||||||||    
T  66800 actccaagatcccaagccaaccactagaccaatcccaaatgggtt 66756  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12913 - 12960
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggttaca 48  Q
    |||||||||||||||| ||||||| ||||||| ||||||| |||||||    
T  12913 actccaagatcccaagtcaaccactaggccaatcccaaataggttaca 12960  T

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Target: scaffold0460 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8338 - 8382
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||    
T  8338 actccaagatcccgagccaaccactaaaccaaccccaaatgggtt 8382  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27814 - 27770
Alignment:
Q  1 actccaagatcccaagccaaccaccaggccaaccccaaatgggtt 45  Q
    ||||||| ||||||| |||||||| || |||||||||||||||||    
T  27814 actccaaaatcccaaaccaaccactagaccaaccccaaatgggtt 27770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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