View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2198_high_9 (Length: 347)
Name: NF2198_high_9
Description: NF2198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2198_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 336
Target Start/End: Complemental strand, 46772993 - 46772656
Alignment:
| Q |
16 |
tctcattgtctctcagaaattctcaggggcgttatttaatctagagttccttc-----------------tatcttaattgattgattaagttgctatta |
98 |
Q |
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| T |
46772993 |
tctcattgtctctcagaaattctcaggggcgttatttaatctagagttccttccaaaggattgttccttctatcttaattgattgattaagttgctatta |
46772894 |
T |
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| Q |
99 |
atagttgtattgcctagttttcttaaaaaattaaataaatatttgtattgtacgttattaactcaattgtttatgttatgttgataatttgaaggatcaa |
198 |
Q |
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| T |
46772893 |
atagttgtattgcctagttttctttaaaaattaaataaatatttgtattgtatgttattaactcaattgtttatgttatgttgataatttgaaggatcaa |
46772794 |
T |
|
| Q |
199 |
gaatagtgcacaaaaaacatctccgctggggaagtttcccaaaccagctaatttaggaggtacagtgtctttgcttactctctctgtctcaaaccaaagt |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
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| T |
46772793 |
gaatagtgcacaaaaaacatctccgctggggaagtttcccaaaccagctaatttaggaggtacagtgcctttgcttgctctctctgtctcaaaccaaagt |
46772694 |
T |
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| Q |
299 |
caattttaagttcaaactgttcaaattgtggtgttctt |
336 |
Q |
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||||||||||||||||| |||||||||||||||||||| |
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| T |
46772693 |
caattttaagttcaaacagttcaaattgtggtgttctt |
46772656 |
T |
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