View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2198_low_17 (Length: 304)
Name: NF2198_low_17
Description: NF2198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2198_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 15 - 289
Target Start/End: Complemental strand, 14213458 - 14213184
Alignment:
| Q |
15 |
tcaacacaatacaaaatgaaaaaacaaggaacactctaaaaacaagatgtatatcaaacttaaggactcaaaaccaagaattctttgaattctctgacca |
114 |
Q |
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| T |
14213458 |
tcaacacaatacaaaatgaaaaaacaaggaacactctaaaaacaagatgtatatcaaacttaaggactcaaaaccaagaattctttgaattctctgacca |
14213359 |
T |
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| Q |
115 |
atcagtcttatccaatctttattatggcattgacaacattgaaattgcaatacaatcacaacatccagaacaaagatcttttaaccttaaaaagtcagaa |
214 |
Q |
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| T |
14213358 |
atcagtcttatccaatctttattatggcattgacaacattgaaattgcaatacaatcacaacatccagaacaaagatcttttaaccttaaaaagtcagaa |
14213259 |
T |
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| Q |
215 |
gaaatgcttcaagttccagcaatgcttgatgaagatgaattcactgcttcaattccaaatcattacttggtttgt |
289 |
Q |
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| T |
14213258 |
gaaatgcttcaagttccagcaatgcttgatgaagatgaattcactgcttcaattccaaatcattacttggtttgt |
14213184 |
T |
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