View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2200_high_11 (Length: 255)
Name: NF2200_high_11
Description: NF2200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2200_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 36744594 - 36744833
Alignment:
| Q |
1 |
taagtggatctactatgttaggtactcatgtggaactttctggtttatcgtagagcttcttgttttctacattatctatctcctttttgtagttttttag |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |
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| T |
36744594 |
taagtggatctactatgttaggtactcatgtggaactttctggtttatcgtagagcttcttgttttctacattatctgtctcctttttgtggttttttag |
36744693 |
T |
|
| Q |
101 |
ttggacatctgagaagacgtcattgctgctagatggttttaatatagttatttttatgtatcaacttgactaaagtggatgattttgatgcagtcttcgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
36744694 |
ttggacatctgagaagacgtcattgctgctagatggttttaatatagttatttttatgtaacaacttgactaaagtggatgattttgatgcagtcttcgg |
36744793 |
T |
|
| Q |
201 |
tatcatctgcttcatccagactacttatattacagaataa |
240 |
Q |
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|||||||||||||||||||||||||||||| ||||||||| |
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| T |
36744794 |
tatcatctgcttcatccagactacttatatcacagaataa |
36744833 |
T |
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