View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2200_high_8 (Length: 316)
Name: NF2200_high_8
Description: NF2200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2200_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 26755737 - 26755456
Alignment:
| Q |
17 |
aagggcaggaaatttggctttcttgggttaatctttctcatttcctcaacatcttgcataggtctcttgttcatagttggccattgccacttattgcttg |
116 |
Q |
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| T |
26755737 |
aagggcaggaaatttggctttcttgggttgatctttctcatttcctcaacatcttgcataggtctcttgttcatagttggccattgccacttattgcttg |
26755638 |
T |
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| Q |
117 |
tgtttcgctcttcaccacctatgcagcttttagtctggaacatagtagcagcaacttgatcttcctccagtaatagctggtccggaaaaataatggtgat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26755637 |
tgtttcgctcttcaccacctatgcagcttttagtctggaacatagtagcagcaaattgatcttcctccagtaatagctggtccggaaaaataatggtgat |
26755538 |
T |
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| Q |
217 |
ctcttcgggcacatcagttgagggaatttggttcctttggtgaatttctgtgtccttattctctaggtttgtgttgctatct |
298 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26755537 |
ctcttcaggcacatcagttgagggaatttggttcctttggtgaatttctgtgtccttattctctaggtttgtgttgctatct |
26755456 |
T |
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