View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2201_high_10 (Length: 334)
Name: NF2201_high_10
Description: NF2201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2201_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 6967868 - 6968171
Alignment:
| Q |
18 |
caaccaagcaaagaaactccaaggtgaatatgtgagaaagtctttagttctaaagatggatgaaagacaaaagttttatgatgagtttgaaggggttaag |
117 |
Q |
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| T |
6967868 |
caaccaagcaaagaaactccaaggtgaatatgtgagaaagtctttagttctaaagatggatgaaagacaaaagttttatgatgagtttgaaggggttaag |
6967967 |
T |
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| Q |
118 |
tttgtttggagtctaatcaagattgtccccaacacaaattctgtttcattctatccagcttcagacaaaagattctaccttctcacatttcatcgtagtc |
217 |
Q |
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| T |
6967968 |
tttgtttggagtctaatcaagattgtccccaacacaaattctgtttcattctatccagcttcagacaaaagattctaccttctcacatttcatcgtagtc |
6968067 |
T |
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| Q |
218 |
atcgcgatttcgttgagaaatcttaccttaaccatgttttggaacaaggtaaagaaattggtctaagtaagaggcagagaaagctttacacaaattgcac |
317 |
Q |
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| T |
6968068 |
atcgcgatttcgttgagaaatcttaccttaaccatgttttggaacaaggtaaagaaattggtctaagtaagaggcagagaaagctttacacaaattgcac |
6968167 |
T |
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| Q |
318 |
aggt |
321 |
Q |
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|||| |
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| T |
6968168 |
aggt |
6968171 |
T |
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