View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2201_low_8 (Length: 373)
Name: NF2201_low_8
Description: NF2201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2201_low_8 |
 | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
| [»] scaffold0554 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 15885664 - 15886019
Alignment:
| Q |
1 |
aaaggagttgttgatgagaactttcttaatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttc |
100 |
Q |
| |
|
|||||| |||||| |||||||| | ||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
15885664 |
aaaggaattgttggtgagaactatattaatgagctcacttatttgaagtcagttgtgaaagagaccttaaggttacaccctccagctcctcttttacttc |
15885763 |
T |
|
| Q |
101 |
caagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagta |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||| |||||||||||| ||||||| |
|
|
| T |
15885764 |
caagagaatgtgaacaagcatgtgagattgatggttatcatataccaaccaaaagcaaggtgatagtcaatgcatgggcgattggaagagatccaaagta |
15885863 |
T |
|
| Q |
201 |
ttggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaaga |
300 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||| ||||||||| |||| || ||||||| ||||||||||||||||||||| || | |||||| |
|
|
| T |
15885864 |
ttggactgaaccagagaggttttatccagagagattcattggtagctctattgactataaagggaataattttgagtacattccttttggttctggaaga |
15885963 |
T |
|
| Q |
301 |
agaatatgtccaggcataacatttggtttgataaatgttgagttggcactttcatt |
356 |
Q |
| |
|
|||||||| || |||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
15885964 |
agaatatgcccgggcataacatttggtttggtaaatgttgagttggcacttgcatt |
15886019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 28 - 356
Target Start/End: Complemental strand, 12610176 - 12609848
Alignment:
| Q |
28 |
aatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgaga |
127 |
Q |
| |
|
|||||||||| ||||| |||||| ||||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
12610176 |
aatgaactcacttatttaaagtcagttgtgaaagagaccttaaggttacatcctccaggtcctcttttacttccaagagaatgtggacaagcatgtgaga |
12610077 |
T |
|
| Q |
128 |
ttgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatcc |
227 |
Q |
| |
|
||||||| |||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||| |||| ||||||||| |
|
|
| T |
12610076 |
ttgatgggtatcgtataccaatcaaaagcaaggtgatagtcaatgcatgggcgattggaagagatccaaagtactggactgaaccagagaagttttatcc |
12609977 |
T |
|
| Q |
228 |
ggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggt |
327 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| || || || |||||||||||||||||||| | ||||||||| |
|
|
| T |
12609976 |
ggagagattcatcggtagctctattgactacaaagggaataattttgagtacattccctttggtgctggaagaagaatatgtccaggtagcacatttggt |
12609877 |
T |
|
| Q |
328 |
ttgataaatgttgagttggcactttcatt |
356 |
Q |
| |
|
|||||||||||||||||||||||| |||| |
|
|
| T |
12609876 |
ttgataaatgttgagttggcacttgcatt |
12609848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 28 - 356
Target Start/End: Complemental strand, 12637269 - 12636944
Alignment:
| Q |
28 |
aatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgaga |
127 |
Q |
| |
|
||||||||| |||||||||||| | | ||||||||||| ||||||||||||||||| ||||||||||| || ||||||||| |||||||||||| | |
|
|
| T |
12637269 |
aatgaactcgaatatttgaagttagtagtgaaagagactctaaggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaa |
12637173 |
T |
|
| Q |
128 |
ttgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatcc |
227 |
Q |
| |
|
|||| || |||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||| ||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
12637172 |
ttgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatcc |
12637073 |
T |
|
| Q |
228 |
ggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggt |
327 |
Q |
| |
|
||||||||||| ||||||||| |||| |||||||| | ||||||||||||||||||||| || || |||||||||||||| |||||||| ||||||||| |
|
|
| T |
12637072 |
agagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgcaggaagaagaatatgcccaggcatcacatttggt |
12636973 |
T |
|
| Q |
328 |
ttgataaatgttgagttggcactttcatt |
356 |
Q |
| |
|
|||||||||||||||||||||||| |||| |
|
|
| T |
12636972 |
ttgataaatgttgagttggcacttgcatt |
12636944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 151; Significance: 8e-80; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 29 - 351
Target Start/End: Complemental strand, 62423 - 62101
Alignment:
| Q |
29 |
atgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagat |
128 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| | ||||||||||| |||| | |||||||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
62423 |
atgaactcaaatacgtgaagtcaattgtgaaagagaccctgaggttacaccccccaggtgctcttttacttccaagagaatgtagagaagcatgtgagat |
62324 |
T |
|
| Q |
129 |
tgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccg |
228 |
Q |
| |
|
|||||| |||||||||||||| |||| ||| ||||||| |||||||||||||| ||||||||| ||| ||| ||||| ||||| |||||||||||||| |
|
|
| T |
62323 |
tgatgggtatcatataccaatgaaaacaaagctgatagttaatgcatgggcaatcggaagagatccaaggtactggacggaaccagagaggttttatcca |
62224 |
T |
|
| Q |
229 |
gagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggtt |
328 |
Q |
| |
|
||||||||||| ||||| ||| |||| ||||| |||| |||||| |||||||||||||| || || |||| ||||||||| ||||||| | |||||||| |
|
|
| T |
62223 |
gagagattcattggtagttctattgactacaacgggaataatttcgagtacattccttttggtgctggaaaaagaatatgcccaggcagtaaatttggtt |
62124 |
T |
|
| Q |
329 |
tgataaatgttgagttggcactt |
351 |
Q |
| |
|
|||| | | ||||| |||||||| |
|
|
| T |
62123 |
tgatgagtcttgagctggcactt |
62101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 342
Target Start/End: Complemental strand, 21780084 - 21779770
Alignment:
| Q |
28 |
aatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgaga |
127 |
Q |
| |
|
||||||||||| |||||||| ||| |||| ||||| || |||||| ||||||||||||| |||||||| | || |||||||||| ||||||||||| | |
|
|
| T |
21780084 |
aatgaactcaattatttgaaatcagttgtcaaagaaaccttaaggctacaccctccagcacctcttttgttaccgagagaatgtagtcaagcatgtgata |
21779985 |
T |
|
| Q |
128 |
ttgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatcc |
227 |
Q |
| |
|
| |||| || || || || || || | |||||||||| | ||||| |||||||||| ||||||| |||| || ||||||||||| |||| ||||||||| |
|
|
| T |
21779984 |
taaatggttaccacattccgattaagactaaggtgataatcaatgcttgggcaattgcaagagatccaaactactggactgaaccagagatgttttatcc |
21779885 |
T |
|
| Q |
228 |
ggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggt |
327 |
Q |
| |
|
||||||||||||| |||| | |||| | ||||||| |||||||||||||||||| || || ||||||||||||||||| ||||| | ||||||||| |
|
|
| T |
21779884 |
agagagattcatcgatagcgatattgactttaaagggagtaattttgagtacattccatttggtgccggaagaagaatatgcccagggagcacatttggt |
21779785 |
T |
|
| Q |
328 |
ttgataaatgttgag |
342 |
Q |
| |
|
|||| |||| ||||| |
|
|
| T |
21779784 |
ttgagaaatattgag |
21779770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 12438437 - 12438286
Alignment:
| Q |
166 |
gtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaaggga |
265 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||| || | |||| |||| |||||||| || | | | | |||||||||||||| |
|
|
| T |
12438437 |
gtgaatgcatgggcaattggaagagacccaaagtattggaatgaaggagaaaagtttaatcctgagagatttattgattgtccaattgattacaaagggt |
12438338 |
T |
|
| Q |
266 |
ctaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcat |
317 |
Q |
| |
|
||||||| |||| || ||||| || || ||||||||||| ||||| ||||| |
|
|
| T |
12438337 |
ctaatttcgagtttataccttttggtgctggaagaagaatgtgtcccggcat |
12438286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 342
Target Start/End: Complemental strand, 23146191 - 23145877
Alignment:
| Q |
28 |
aatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgaga |
127 |
Q |
| |
|
||||||||||| |||||||| | | |||| ||||| || |||||| ||||||||||||| |||||||| | || |||||||||| |||| |||||| | |
|
|
| T |
23146191 |
aatgaactcaattatttgaaattagttgtcaaagaaaccttaaggctacaccctccagcacctcttttgttaccgagagaatgtagtcaagaatgtgata |
23146092 |
T |
|
| Q |
128 |
ttgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatcc |
227 |
Q |
| |
|
| |||| ||||| ||||| || || | ||||||| |||| ||||| |||||| ||| ||||||| |||| || ||||||||||| |||||||||||||| |
|
|
| T |
23146091 |
taaatggttatcacataccgattaagactaaggtgttagtcaatgcttgggcagttgcaagagatccaaactactggactgaaccagagaggttttatcc |
23145992 |
T |
|
| Q |
228 |
ggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggt |
327 |
Q |
| |
|
||||||||||||| ||| | |||| || ||||||| ||| ||||||||||||||||| || || |||||||||||||||||||| | ||||||||| |
|
|
| T |
23145991 |
agagagattcatcgacagcgatattgactataaagggagtaactttgagtacattccttttggtgctggaagaagaatatgtccagggagcacatttggt |
23145892 |
T |
|
| Q |
328 |
ttgataaatgttgag |
342 |
Q |
| |
|
|||| |||| ||||| |
|
|
| T |
23145891 |
ttgacaaatattgag |
23145877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 331
Target Start/End: Complemental strand, 23039312 - 23039009
Alignment:
| Q |
28 |
aatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgaga |
127 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||||| || | ||||||||||||||| | |||||||| | |||||||||||| ||| ||||||||| |
|
|
| T |
23039312 |
aatgaactcaattatttgaagtcagttgtcaaagaaaccctgaggttacaccctccaacacctcttttgctgccaagagaatgtcgtcaaacatgtgaga |
23039213 |
T |
|
| Q |
128 |
ttgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatcc |
227 |
Q |
| |
|
| |||| ||||| ||||| || || |||||||||||||| ||||| |||||||||| ||||||| |||| || |||||||| || ||||| |||||||| |
|
|
| T |
23039212 |
taaatggttatcacatacctattaagagtaaggtgatagtcaatgcttgggcaattgcaagagatccaaattactggactgagccggagagattttatcc |
23039113 |
T |
|
| Q |
228 |
ggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggt |
327 |
Q |
| |
|
||||||||| | | ||| | |||| || ||||| | ||||| ||||||||||||||| || ||||||||||||||||| ||||| | ||||||||| |
|
|
| T |
23039112 |
agagagattccttgacagcgccattgactataaaggaagtaattatgagtacattccttttggtgccggaagaagaatatgcccagggagcacatttggt |
23039013 |
T |
|
| Q |
328 |
ttga |
331 |
Q |
| |
|
|||| |
|
|
| T |
23039012 |
ttga |
23039009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 70 - 341
Target Start/End: Complemental strand, 23036399 - 23036128
Alignment:
| Q |
70 |
aggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtga |
169 |
Q |
| |
|
||||||||||||||| | |||||||| | |||||||| ||| |||||||||| ||| |||| ||||| ||||| || || |||||||| | | | | |
|
|
| T |
23036399 |
aggttacaccctccaacacctcttttgctaccaagagagtgtgttcaagcatgtgtgataaatggttatcacatacctattaagagtaaggtaacaataa |
23036300 |
T |
|
| Q |
170 |
atgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaa |
269 |
Q |
| |
|
|||| |||||||||| ||||||| |||| || ||||||||||| ||||| |||||||| ||||||||||||| ||| || |||| |||||||||| ||| |
|
|
| T |
23036299 |
atgcttgggcaattgcaagagatccaaattactggactgaaccagagagattttatcccgagagattcatcgacagcgctattgactacaaagggagtaa |
23036200 |
T |
|
| Q |
270 |
ttttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggtttgataaatgttga |
341 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| ||||| | ||||||||||||| |||| |||| |
|
|
| T |
23036199 |
ctttgagtacattccttttggtgccggaagaagaatatgcccagggagcacatttggtttgagaaatattga |
23036128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 76 - 317
Target Start/End: Complemental strand, 22972174 - 22971933
Alignment:
| Q |
76 |
caccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcat |
175 |
Q |
| |
|
|||||||| | |||||||||||| ||||| | ||| |||||| |||||||||||||| ||||| |||||||||||||||| ||||||| | ||||| | |
|
|
| T |
22972174 |
caccctcctggtcctcttttagtaccaagggtgtgtggacaagcttgtgagattgatggttatcacataccaatcaaaagtagggtgataatcaatgctt |
22972075 |
T |
|
| Q |
176 |
gggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttga |
275 |
Q |
| |
|
||||||||||||| ||| |||| ||||||||||| || || | ||||||||| || ||||| || | ||| ||| |||||| |||||| || |||||||| |
|
|
| T |
22972074 |
gggcaattggaagggatccaaaatattggactgatccagataagttttatcctgaaagatttattgatagttctcttgatttcaaaggaacaaattttga |
22971975 |
T |
|
| Q |
276 |
gtacattcctttcggcgccggaagaagaatatgtccaggcat |
317 |
Q |
| |
|
||||||||| || || || ||||||||||| ||||||||||| |
|
|
| T |
22971974 |
gtacattccatttggtgctggaagaagaatttgtccaggcat |
22971933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 347
Target Start/End: Complemental strand, 23149029 - 23148710
Alignment:
| Q |
28 |
aatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgaga |
127 |
Q |
| |
|
||||||||||| |||||||| | | |||| ||||| || |||||| |||||||||| || |||||||| | || |||||||||| ||||| ||||| | |
|
|
| T |
23149029 |
aatgaactcaattatttgaaattagttgtcaaagaaaccttaaggctacaccctccggcacctcttttgttaccgagagaatgtagtcaagcgtgtgata |
23148930 |
T |
|
| Q |
128 |
ttgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatcc |
227 |
Q |
| |
|
| |||| ||||| || || || || | ||| |||||| | ||||| |||||||||| |||||||||||| || ||||||||||| |||||||||||||| |
|
|
| T |
23148929 |
taaatggttatcacattccgattaagactaaagtgataatcaatgcttgggcaattgcaagagattcaaactactggactgaaccagagaggttttatcc |
23148830 |
T |
|
| Q |
228 |
ggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggt |
327 |
Q |
| |
|
||||||||||| | ||| | |||| || ||||||| ||| || |||||||||||||| || ||||||||||||||||| ||||| | | ||||||| |
|
|
| T |
23148829 |
agagagattcattgaaagcgatattgactataaagggagtaacttcgagtacattccttttggtgccggaagaagaatatgcccagggagcatatttggt |
23148730 |
T |
|
| Q |
328 |
ttgataaatgttgagttggc |
347 |
Q |
| |
|
|||| |||| ||||| |||| |
|
|
| T |
23148729 |
ttgagaaatattgagctggc |
23148710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 317
Target Start/End: Complemental strand, 22946616 - 22946386
Alignment:
| Q |
87 |
tcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattgga |
186 |
Q |
| |
|
|||||||||| |||| || | ||| |||||||||||||||||||||| ||||| ||||||||||| |||| ||||||| | ||||| |||||||||||| |
|
|
| T |
22946616 |
tcctcttttaattcctagggtgtgtgcacaagcatgtgagattgatggttatcacataccaatcaatagtagggtgataatcaatgcttgggcaattgga |
22946517 |
T |
|
| Q |
187 |
agagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctt |
286 |
Q |
| |
|
|| ||| |||| ||||||||||| || || | ||||||||| || ||||| || | ||| ||| |||||| |||||| || ||||||||||||||||| | |
|
|
| T |
22946516 |
agggatccaaaatattggactgatccagataagttttatcctgaaagatttattgatagttctgttgatttcaaaggaacaaattttgagtacattccat |
22946417 |
T |
|
| Q |
287 |
tcggcgccggaagaagaatatgtccaggcat |
317 |
Q |
| |
|
| || |||||||| ||||| ||||| ||||| |
|
|
| T |
22946416 |
ttggtgccggaaggagaatttgtccgggcat |
22946386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 28 - 314
Target Start/End: Complemental strand, 23024543 - 23024257
Alignment:
| Q |
28 |
aatgaactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgaga |
127 |
Q |
| |
|
|||||||| || |||||||| |||||||| ||||| || | |||||||||||||| || || |||||| | || ||||||||| | ||| ||||| ||| |
|
|
| T |
23024543 |
aatgaacttaattatttgaaatcaattgtcaaagaaaccctgaggttacaccctccggcaccacttttaataccgagagaatgtgctcaatcatgtaaga |
23024444 |
T |
|
| Q |
128 |
ttgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatcc |
227 |
Q |
| |
|
| || || ||| | || |||| || | |||||||||||| ||||| |||||||||| ||||||| |||| || ||||| ||||| |||||||||||||| |
|
|
| T |
23024443 |
tagacggttatgacattccaactaagactaaggtgatagtcaatgcttgggcaattgcaagagatccaaattactggaccgaaccagagaggttttatcc |
23024344 |
T |
|
| Q |
228 |
ggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccagg |
314 |
Q |
| |
|
||||||||||||| ||| | |||| || ||||||| ||| |||||||| |||||||| || || ||| |||||||||||||||| |
|
|
| T |
23024343 |
agagagattcatcgatagtgatattgactataaagggagtaactttgagtatattccttttggtgcgggacgaagaatatgtccagg |
23024257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 40 - 345
Target Start/End: Complemental strand, 23140305 - 23140000
Alignment:
| Q |
40 |
tatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatc |
139 |
Q |
| |
|
|||||||| ||||| || ||||| || || ||||||||| |||| | |||||||| | |||||||| ||| |||||||||||||| |||| |||| |
|
|
| T |
23140305 |
tatttgaaatcaatcgtcaaagaaaccttgaggttacacactccggtgcctcttttgctaccaagagagtgtggtcaagcatgtgagatacatggttatc |
23140206 |
T |
|
| Q |
140 |
atataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcat |
239 |
Q |
| |
|
| |||||| | || | ||||||| | || |||||||||||||| | |||||| |||| || ||||||||||| |||| |||||||| ||||||||||| |
|
|
| T |
23140205 |
acataccatttaagactaaggtggtcgtcaatgcatgggcaatcgcgagagatccaaactactggactgaaccagagaaattttatccagagagattcat |
23140106 |
T |
|
| Q |
240 |
cggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggtttgataaatgtt |
339 |
Q |
| |
|
|| | | || |||| || ||||||| | ||||||||||||||||||| || || ||| |||||||||| ||||| | | ||||||||||| ||||||| |
|
|
| T |
23140105 |
gggaaacactattgactataaagggagtgattttgagtacattccttttggtgcgggacgaagaatatgcccaggaagcatatttggtttgagaaatgtt |
23140006 |
T |
|
| Q |
340 |
gagttg |
345 |
Q |
| |
|
|||||| |
|
|
| T |
23140005 |
gagttg |
23140000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 70 - 347
Target Start/End: Complemental strand, 23032928 - 23032666
Alignment:
| Q |
70 |
aggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtga |
169 |
Q |
| |
|
||||| |||||| ||| |||||||| | ||||||||||| |||||||||||||| |||| ||||| |||||||| ||||||||||||||||| | |
|
|
| T |
23032928 |
aggttccaccctacagtacctcttttgctaccaagagaatgcggtcaagcatgtgagataaatggttatcacataccaattaaaagtaaggtgatagtca |
23032829 |
T |
|
| Q |
170 |
atgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaa |
269 |
Q |
| |
|
|||| |||||||||| ||||||| |||| || ||||||||| || ||||||||||||| ||| || |||| || ||||| | ||| |
|
|
| T |
23032828 |
atgcttgggcaattgcaagagatccaaactactggactgaa---------------ccagagagattcatcgacagcgctattgactataaaggaagtaa |
23032744 |
T |
|
| Q |
270 |
ttttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggtttgataaatgttgagttggc |
347 |
Q |
| |
|
||||||||||||||| || || ||||||||||||||||| ||||| | ||||||||||||| |||| ||||| |||| |
|
|
| T |
23032743 |
ttttgagtacattccctttggtgccggaagaagaatatgcccagggagtacatttggtttgagaaatattgagctggc |
23032666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 347
Target Start/End: Complemental strand, 23017245 - 23017014
Alignment:
| Q |
116 |
aagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctga |
215 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| | || | |||||||||| | ||||| |||||||| | ||||||| |||| || ||||||||||| || |
|
|
| T |
23017245 |
aagcatgtgagatacatggttatcacataccagttaagactaaggtgataattaatgcttgggcaatcgcaagagatccaaactactggactgaaccaga |
23017146 |
T |
|
| Q |
216 |
gaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggc |
315 |
Q |
| |
|
|| ||||||||| ||||||||||| | | | | |||| || ||||||| ||| || || ||||||||||| || | |||||||||||||| || || |
|
|
| T |
23017145 |
gaagttttatccagagagattcattgacaacggtattgactataaagggagtaacttcgaatacattccttttggtggtggaagaagaatatgccctggg |
23017046 |
T |
|
| Q |
316 |
ataacatttggtttgataaatgttgagttggc |
347 |
Q |
| |
|
| ||||| ||||||| ||||||||||||||| |
|
|
| T |
23017045 |
agtacattcggtttgagaaatgttgagttggc |
23017014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 53 - 343
Target Start/End: Original strand, 22941328 - 22941618
Alignment:
| Q |
53 |
ttgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaa |
152 |
Q |
| |
|
||||||||||||| || || || |||||||| ||| | |||| |||||||||||||| |||||||||||| || |||| ||| ||||||| | || |
|
|
| T |
22941328 |
ttgtgaaagagacattgagattgcaccctcctgctgcatttttgcttccaagagaatgtggacaagcatgtgaaataaatgggtatgatataccttttaa |
22941427 |
T |
|
| Q |
153 |
aagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctctttt |
252 |
Q |
| |
|
||| || |||||||||||||| ||||| |||||||||||| |||| ||||| ||| || ||||| |||||||| || || || || | || | | | |
|
|
| T |
22941428 |
aagcaaagtgatagtgaatgcttgggccattggaagagatccaaatcattgggatgacccagagagattttatcctgaaaggtttattgaaagttgtgta |
22941527 |
T |
|
| Q |
253 |
gattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggtttgataaatgttgagt |
343 |
Q |
| |
|
||||| || || | ||||||||||| |||||| || || || ||||||||||| ||||| || |||||||||||||| | |||||||||| |
|
|
| T |
22941528 |
gattataagggaaataattttgagttcattccatttggtgctggaagaagaatgtgtccgggagtaacatttggtttggtcaatgttgagt |
22941618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 343
Target Start/End: Complemental strand, 22832081 - 22831791
Alignment:
| Q |
53 |
ttgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaa |
152 |
Q |
| |
|
||||||||||||| || || ||||||||||| | | |||| |||||||||||||| | ||||||||||||| |||| ||| ||||||| | || |
|
|
| T |
22832081 |
ttgtgaaagagacattgagattacaccctccgtcaacatttttgcttccaagagaatgtggaaaagcatgtgagataaatgggtatgatataccttttaa |
22831982 |
T |
|
| Q |
153 |
aagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctctttt |
252 |
Q |
| |
|
||| || |||||||||||||| ||||| |||||||||||| |||| ||||| || || || || |||||||| || |||||||| | ||| | | | |
|
|
| T |
22831981 |
aagcaaagtgatagtgaatgcttgggctattggaagagatccaaatcattgggacgacccagaaagattttatcctgaaagattcattgatagttgtgtg |
22831882 |
T |
|
| Q |
253 |
gattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggca-taacatttggtttgataaatgttgagt |
343 |
Q |
| |
|
|| || || || | ||||||||||| ||||||||| || || || |||||||| | ||| |||| | |||||||||||| | |||||||||| |
|
|
| T |
22831881 |
gactataagggtaataattttgagttcattccttttggtgctggtagaagaatgtttcc-ggcagtcacatttggtttggtcaatgttgagt |
22831791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 317
Target Start/End: Complemental strand, 22986478 - 22986259
Alignment:
| Q |
98 |
ttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaa |
197 |
Q |
| |
|
|||||||||| ||| |||||| ||||||||| |||| ||| | ||||| | ||||||| || | || ||||| ||||| |||||| | ||| | || |
|
|
| T |
22986478 |
ttccaagagagtgtggacaagcttgtgagattaatggttattacatacctgtaaaaagtagagtcctcgttaatgcttgggccattggacgggatcctaa |
22986379 |
T |
|
| Q |
198 |
gtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccgga |
297 |
Q |
| |
|
||||||| ||| || || | ||||||||| ||||| || || | ||| ||| |||||| |||||| |||||||||||||||||||| || || || ||| |
|
|
| T |
22986378 |
atattggaatgaccccgataagttttatcctgagaggtttattgatagttctattgatttcaaaggaactaattttgagtacattccatttggtgctgga |
22986279 |
T |
|
| Q |
298 |
agaagaatatgtccaggcat |
317 |
Q |
| |
|
|| ||||| ||||| ||||| |
|
|
| T |
22986278 |
aggagaatttgtcctggcat |
22986259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 22916686 - 22916769
Alignment:
| Q |
114 |
acaagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaa |
197 |
Q |
| |
|
|||||||||||| || |||| ||| ||||||| | ||||| || |||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
22916686 |
acaagcatgtgaaataaatgggtatggtataccatttaaaagcaaagtgatagtgaatgcttgggccattggaagagatccaaa |
22916769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0554 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0554
Description:
Target: scaffold0554; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 32 - 347
Target Start/End: Original strand, 6487 - 6802
Alignment:
| Q |
32 |
aactcaaatatttgaagtcaattgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattga |
131 |
Q |
| |
|
||||||| |||||||| ||| | || ||||| || | ||||||||||||||||| |||||||| | |||||||||||| ||||||||||||| | |
|
|
| T |
6487 |
aactcaattatttgaaatcagtcgtcaaagaaacccttaggttacaccctccagcacctcttttgctaccaagagaatgtggtaaagcatgtgagataaa |
6586 |
T |
|
| Q |
132 |
tggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggag |
231 |
Q |
| |
|
||| ||| | ||||| | | |||||||||||| | ||||| |||||||||| ||||||| |||| | ||||||||||| |||||||||||||| ||| |
|
|
| T |
6587 |
tggttataacataccgtttaggagtaaggtgataatcaatgcttgggcaattgcaagagatccaaacttctggactgaaccagagaggttttatccagag |
6686 |
T |
|
| Q |
232 |
agattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggtttga |
331 |
Q |
| |
|
||||||| | ||| || |||| || |||||| ||||||||||||||||||||| || || ||||||||||| || ||||| | | ||||||||||| |
|
|
| T |
6687 |
agattcactgacagcactattgactataaagggggtaattttgagtacattccttttggtgctggaagaagaatttgcccaggaagtatatttggtttga |
6786 |
T |
|
| Q |
332 |
taaatgttgagttggc |
347 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
6787 |
gaaatgttgagctggc |
6802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 343
Target Start/End: Original strand, 5593984 - 5594274
Alignment:
| Q |
53 |
ttgtgaaagagacgttaaggttacaccctccagctcctcttttagttccaagagaatgtacacaagcatgtgagattgatggatatcatataccaatcaa |
152 |
Q |
| |
|
||||||||||||| || || ||||||||||| | | |||| |||||||||||||| | ||||||||||||| |||| ||| ||||||| | || |
|
|
| T |
5593984 |
ttgtgaaagagacattgagattacaccctccgtcaacatttttgcttccaagagaatgtggaaaagcatgtgagataaatgggtatgatataccttttaa |
5594083 |
T |
|
| Q |
153 |
aagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctctttt |
252 |
Q |
| |
|
||| || |||||||||||||| ||||| |||||||||||| |||| ||||| || || || || |||||||| || |||||||| | ||| | | | |
|
|
| T |
5594084 |
aagcaaagtgatagtgaatgcttgggctattggaagagatccaaatcattgggacgacccagaaagattttatcctgaaagattcattgatagttgtgtg |
5594183 |
T |
|
| Q |
253 |
gattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggca-taacatttggtttgataaatgttgagt |
343 |
Q |
| |
|
|| || || || | ||||||||||| ||||||||| || || || |||||||| | ||| |||| | |||||||||||| | |||||||||| |
|
|
| T |
5594184 |
gactataagggtaataattttgagttcattccttttggtgctggtagaagaatgtttcc-ggcagtcacatttggtttggtcaatgttgagt |
5594274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 317
Target Start/End: Complemental strand, 23610400 - 23610199
Alignment:
| Q |
116 |
aagcatgtgagattgatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctga |
215 |
Q |
| |
|
|||| ||||||||| |||| ||||||||||| | ||||||| || || | ||||| |||||||| ||||| ||| | || ||||||| ||| || || |
|
|
| T |
23610400 |
aagcttgtgagattaatggctatcatatacctgtaaaaagtagagtcctaataaatgcttgggcaataggaagggatcctaaatattggaatgacccaga |
23610301 |
T |
|
| Q |
216 |
gaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggc |
315 |
Q |
| |
|
| ||||||||| || || || || | ||||||| |||||| | ||| ||||||||||||| |||||| || || || || || ||||| ||||| ||| |
|
|
| T |
23610300 |
taagttttatcctgaaaggtttattgatagctctattgatttctcaggaactaattttgagttcattccatttggtgctggtaggagaatttgtcccggc |
23610201 |
T |
|
| Q |
316 |
at |
317 |
Q |
| |
|
|| |
|
|
| T |
23610200 |
at |
23610199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 2433634 - 2433708
Alignment:
| Q |
251 |
ttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttg |
325 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||| || || ||||| |||||||||||||| || ||||||| |
|
|
| T |
2433634 |
ttgattacaaagggtctaattttgagtacataccttttggtgcaggaaggagaatatgtccaggaatcacatttg |
2433708 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 41465802 - 41465878
Alignment:
| Q |
160 |
gtgatagtgaatgcatgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagatt |
236 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||| |||||||||||| |||||| || | |||| |||||||||||| |
|
|
| T |
41465802 |
gtgatagtaaatgcatgggcgattggaagagatccaaagtattggagtgaaccggaaaagtttattccggagagatt |
41465878 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 7154485 - 7154561
Alignment:
| Q |
251 |
ttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttggt |
327 |
Q |
| |
|
|||||| |||||| | |||||||||||| |||||||| || || ||||||||||| ||||||||||| |||||||| |
|
|
| T |
7154485 |
ttgatttcaaaggaaataattttgagtatattccttttggtgctggaagaagaatgtgtccaggcatgtcatttggt |
7154561 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 326
Target Start/End: Complemental strand, 31187893 - 31187742
Alignment:
| Q |
175 |
tgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttg |
274 |
Q |
| |
|
|||||||||||||||||| || ||||||| | ||| ||||||| ||| | || ||||| || || |||| | |||||| |||||| || ||||||| |
|
|
| T |
31187893 |
tgggcaattggaagagatgaaaggtattgggcagaagctgagagttttaaacctgagaggtttctcaatagcacaattgatttcaaaggcacaaattttg |
31187794 |
T |
|
| Q |
275 |
agtacattcctttcggcgccggaagaagaatatgtccaggcataacatttgg |
326 |
Q |
| |
|
| ||||| || ||||| || ||||||||||| ||||||||||| ||||||| |
|
|
| T |
31187793 |
aatacataccgttcggtgctggaagaagaatgtgtccaggcatggcatttgg |
31187742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 326
Target Start/End: Original strand, 31225885 - 31226036
Alignment:
| Q |
175 |
tgggcaattggaagagattcaaagtattggactgaacctgagaggttttatccggagagattcatcggtagctcttttgattacaaagggactaattttg |
274 |
Q |
| |
|
|||||||||||||||||| || ||||||| | ||| ||||||| ||| | || ||||| || || |||| | |||||| |||||| || ||||||| |
|
|
| T |
31225885 |
tgggcaattggaagagatgaaaggtattgggcagaagctgagagttttaaacctgagaggtttctcaatagcacaattgatttcaaaggcacaaattttg |
31225984 |
T |
|
| Q |
275 |
agtacattcctttcggcgccggaagaagaatatgtccaggcataacatttgg |
326 |
Q |
| |
|
| ||||| || ||||| || ||||||||||| ||||||||||| ||||||| |
|
|
| T |
31225985 |
aatacataccgttcggtgctggaagaagaatgtgtccaggcatggcatttgg |
31226036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 31177754 - 31177679
Alignment:
| Q |
251 |
ttgattacaaagggactaattttgagtacattcctttcggcgccggaagaagaatatgtccaggcataacatttgg |
326 |
Q |
| |
|
|||||| |||||| || || ||||||||||| || ||||| || ||||||||||| ||||||||||| ||||||| |
|
|
| T |
31177754 |
ttgatttcaaaggtacaaactttgagtacataccgttcggtgctggaagaagaatgtgtccaggcatggcatttgg |
31177679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 41654614 - 41654658
Alignment:
| Q |
166 |
gtgaatgcatgggcaattggaagagattcaaagtattggactgaa |
210 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
41654614 |
gtgaatgcatgggcaattggaagagaccaaaagtattggattgaa |
41654658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 55955063 - 55955001
Alignment:
| Q |
130 |
gatggatatcatataccaatcaaaagtaaggtgatagtgaatgcatgggcaattggaagagat |
192 |
Q |
| |
|
||||||||| | |||||||| || | || |||||||| |||||||||||||||||||||||| |
|
|
| T |
55955063 |
gatggatatgaaataccaataaagactagcgtgatagtaaatgcatgggcaattggaagagat |
55955001 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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