View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2202_low_8 (Length: 250)
Name: NF2202_low_8
Description: NF2202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2202_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 36082693 - 36082863
Alignment:
| Q |
68 |
gttgagttcaagtatttaatgcacacacttttattggacattcttccctaagtcagcaaaatacattgaaatcacaaactaccacatcaaatgataagaa |
167 |
Q |
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| T |
36082693 |
gttgagttcaagtgtttaatgcacacacttttattagacattctttcctaagtcagcaaaatacattgaaatcacaaactaccacatcaaatgataagaa |
36082792 |
T |
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| Q |
168 |
ttttagttaacatcacactgaacccacaaggttactttcactaacatatcttagtgaagtgaatctatatt |
238 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36082793 |
ttttagttaacatcacactgaacccacaaggttactttcactaacatatcttagtgaagtgaatctatatt |
36082863 |
T |
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