View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2205_high_11 (Length: 303)

Name: NF2205_high_11
Description: NF2205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2205_high_11
NF2205_high_11
[»] chr2 (70 HSPs)
chr2 (140-303)||(3100414-3100574)
chr2 (140-303)||(28572222-28572381)
chr2 (140-303)||(5211891-5212051)
chr2 (140-303)||(44534418-44534576)
chr2 (144-303)||(15859278-15859431)
chr2 (170-279)||(28301475-28301584)
chr2 (170-281)||(31545973-31546084)
chr2 (170-281)||(28108330-28108441)
chr2 (144-281)||(28526982-28527116)
chr2 (175-277)||(565135-565237)
chr2 (170-263)||(2882026-2882119)
chr2 (170-279)||(37247841-37247950)
chr2 (170-281)||(23685000-23685111)
chr2 (170-281)||(24775765-24775874)
chr2 (171-282)||(18181167-18181278)
chr2 (170-281)||(28925803-28925914)
chr2 (170-281)||(43077681-43077792)
chr2 (170-278)||(7649933-7650041)
chr2 (170-275)||(30757529-30757634)
chr2 (170-281)||(435031-435144)
chr2 (159-281)||(3123676-3123798)
chr2 (159-277)||(33602185-33602303)
chr2 (170-279)||(33755298-33755407)
chr2 (170-281)||(2048333-2048444)
chr2 (178-281)||(8550597-8550700)
chr2 (170-281)||(41436120-41436230)
chr2 (170-272)||(36103265-36103367)
chr2 (190-279)||(36155574-36155664)
chr2 (147-263)||(36396431-36396544)
chr2 (177-281)||(13375143-13375248)
chr2 (177-291)||(10818669-10818784)
chr2 (170-277)||(11726681-11726788)
chr2 (170-281)||(43950403-43950514)
chr2 (154-281)||(2756702-2756826)
chr2 (178-276)||(8031790-8031886)
chr2 (140-292)||(7213489-7213638)
chr2 (178-288)||(38280144-38280254)
chr2 (170-291)||(9724919-9725040)
chr2 (144-291)||(37529016-37529160)
chr2 (144-281)||(13222086-13222221)
chr2 (88-128)||(33602353-33602393)
chr2 (89-128)||(435205-435244)
chr2 (81-128)||(3100339-3100386)
chr2 (170-281)||(6213805-6213916)
chr2 (170-281)||(10069540-10069651)
chr2 (170-233)||(44194687-44194750)
chr2 (140-258)||(3199912-3200024)
chr2 (82-128)||(13375595-13375641)
chr2 (86-128)||(42881398-42881440)
chr2 (82-128)||(44534608-44534654)
chr2 (170-263)||(39095672-39095765)
chr2 (224-281)||(40965109-40965166)
chr2 (170-258)||(314468-314556)
chr2 (88-128)||(5212079-5212119)
chr2 (170-281)||(6972495-6972606)
chr2 (88-128)||(18181335-18181375)
chr2 (185-292)||(32556228-32556333)
chr2 (88-128)||(44194598-44194638)
chr2 (81-128)||(28572150-28572197)
chr2 (186-244)||(811358-811416)
chr2 (86-128)||(41436023-41436065)
chr2 (159-281)||(45464170-45464291)
chr2 (87-128)||(12872945-12872986)
chr2 (229-281)||(14384066-14384119)
chr2 (84-128)||(3123585-3123629)
chr2 (88-128)||(7650096-7650136)
chr2 (88-128)||(8385022-8385062)
chr2 (100-128)||(17154377-17154405)
chr2 (88-128)||(19009791-19009831)
chr2 (88-128)||(28526910-28526950)
[»] chr5 (64 HSPs)
chr5 (140-303)||(35646023-35646183)
chr5 (144-303)||(8692751-8692908)
chr5 (140-303)||(42575572-42575732)
chr5 (140-303)||(8369634-8369790)
chr5 (140-303)||(22582808-22582965)
chr5 (140-302)||(39008143-39008305)
chr5 (170-281)||(3725227-3725338)
chr5 (170-281)||(11099433-11099544)
chr5 (170-279)||(33988241-33988350)
chr5 (170-277)||(7613748-7613855)
chr5 (170-281)||(16283543-16283654)
chr5 (170-279)||(35334484-35334593)
chr5 (170-281)||(858376-858487)
chr5 (170-279)||(17242912-17243021)
chr5 (170-281)||(25814405-25814516)
chr5 (178-281)||(36469050-36469153)
chr5 (170-281)||(39183583-39183694)
chr5 (170-281)||(42211374-42211481)
chr5 (170-281)||(6610878-6610989)
chr5 (178-280)||(36446644-36446746)
chr5 (184-281)||(32539717-32539814)
chr5 (170-281)||(5147451-5147563)
chr5 (174-281)||(4576366-4576472)
chr5 (170-281)||(15254806-15254917)
chr5 (170-281)||(35585572-35585683)
chr5 (143-296)||(39060363-39060513)
chr5 (170-244)||(24231051-24231125)
chr5 (188-281)||(15814701-15814794)
chr5 (170-258)||(33012395-33012483)
chr5 (170-296)||(5357758-5357884)
chr5 (199-281)||(41184730-41184812)
chr5 (170-291)||(13135794-13135905)
chr5 (170-217)||(6735377-6735424)
chr5 (170-244)||(7311173-7311247)
chr5 (174-278)||(4475291-4475393)
chr5 (170-258)||(15898232-15898320)
chr5 (145-243)||(16926085-16926180)
chr5 (170-257)||(20189933-20190021)
chr5 (172-296)||(30437680-30437804)
chr5 (140-242)||(38978918-38979017)
chr5 (184-263)||(4412436-4412515)
chr5 (170-296)||(35988675-35988801)
chr5 (82-128)||(15814603-15814649)
chr5 (179-281)||(41594803-41594904)
chr5 (180-281)||(13422314-13422414)
chr5 (144-289)||(6629343-6629483)
chr5 (88-128)||(25814310-25814350)
chr5 (81-128)||(39060534-39060582)
chr5 (81-128)||(8369819-8369866)
chr5 (81-128)||(42575760-42575807)
chr5 (88-130)||(3725133-3725175)
chr5 (82-128)||(4044598-4044644)
chr5 (140-244)||(25108587-25108688)
chr5 (140-244)||(25111141-25111242)
chr5 (140-244)||(25167679-25167780)
chr5 (140-244)||(25170232-25170333)
chr5 (170-244)||(31090345-31090419)
chr5 (170-244)||(35666926-35667000)
chr5 (87-128)||(7613652-7613693)
chr5 (172-244)||(4194975-4195047)
chr5 (88-128)||(7276329-7276369)
chr5 (88-128)||(13422473-13422513)
chr5 (201-281)||(28057786-28057866)
chr5 (170-242)||(42818944-42819016)
[»] chr3 (65 HSPs)
chr3 (140-303)||(43639449-43639609)
chr3 (140-303)||(54122157-54122317)
chr3 (140-303)||(21296436-21296596)
chr3 (172-281)||(39866508-39866617)
chr3 (170-281)||(9017842-9017953)
chr3 (172-281)||(2868617-2868726)
chr3 (170-279)||(26134660-26134769)
chr3 (170-281)||(10855035-10855146)
chr3 (170-281)||(17776949-17777060)
chr3 (170-281)||(19078250-19078361)
chr3 (170-281)||(33994698-33994809)
chr3 (170-275)||(5245453-5245558)
chr3 (180-281)||(11251082-11251183)
chr3 (170-281)||(32827259-32827370)
chr3 (170-279)||(15280646-15280754)
chr3 (170-258)||(36097633-36097721)
chr3 (170-277)||(14756073-14756180)
chr3 (177-263)||(1772079-1772165)
chr3 (180-292)||(26142950-26143064)
chr3 (170-275)||(54845477-54845582)
chr3 (170-277)||(32023059-32023167)
chr3 (170-242)||(54458303-54458375)
chr3 (170-277)||(45392131-45392237)
chr3 (170-277)||(52325218-52325325)
chr3 (170-273)||(53876399-53876502)
chr3 (203-303)||(39364970-39365071)
chr3 (140-255)||(54493922-54494034)
chr3 (170-289)||(9218186-9218305)
chr3 (170-278)||(54783004-54783112)
chr3 (209-296)||(49408589-49408676)
chr3 (177-272)||(55415404-55415498)
chr3 (187-281)||(41031633-41031727)
chr3 (170-281)||(46785934-46786047)
chr3 (170-268)||(8706191-8706285)
chr3 (170-268)||(9058078-9058172)
chr3 (235-291)||(22202312-22202368)
chr3 (170-222)||(22202403-22202455)
chr3 (170-289)||(39329697-39329816)
chr3 (170-281)||(48744300-48744412)
chr3 (140-241)||(26832085-26832183)
chr3 (82-128)||(1772233-1772279)
chr3 (170-244)||(15082043-15082117)
chr3 (214-281)||(11529031-11529101)
chr3 (170-222)||(11529125-11529177)
chr3 (170-281)||(44218989-44219099)
chr3 (180-288)||(42547054-42547162)
chr3 (171-252)||(51636880-51636960)
chr3 (88-128)||(2868520-2868560)
chr3 (175-291)||(27152907-27153023)
chr3 (170-213)||(12744855-12744898)
chr3 (214-281)||(12745048-12745114)
chr3 (81-128)||(21296624-21296671)
chr3 (81-128)||(39365138-39365185)
chr3 (81-128)||(46786102-46786149)
chr3 (140-246)||(1923104-1923204)
chr3 (229-283)||(50736196-50736250)
chr3 (229-283)||(50776605-50776659)
chr3 (170-263)||(21585383-21585476)
chr3 (81-130)||(36097775-36097824)
chr3 (171-281)||(40614085-40614191)
chr3 (87-128)||(43640686-43640727)
chr3 (170-271)||(53754029-53754130)
chr3 (198-278)||(17274750-17274830)
chr3 (168-220)||(39144684-39144736)
chr3 (140-283)||(48409598-48409740)
[»] chr7 (66 HSPs)
chr7 (140-303)||(7425810-7425971)
chr7 (140-301)||(38181809-38181967)
chr7 (140-302)||(11616575-11616734)
chr7 (190-303)||(5083405-5083518)
chr7 (170-291)||(37490563-37490684)
chr7 (140-279)||(40038066-40038204)
chr7 (170-281)||(23058860-23058970)
chr7 (170-281)||(47454045-47454156)
chr7 (170-279)||(29257588-29257697)
chr7 (170-279)||(44604435-44604543)
chr7 (170-275)||(2846637-2846742)
chr7 (170-258)||(33584604-33584692)
chr7 (170-281)||(5724663-5724773)
chr7 (170-263)||(2842025-2842118)
chr7 (170-262)||(18235231-18235323)
chr7 (180-291)||(27234554-27234664)
chr7 (170-281)||(29434536-29434646)
chr7 (170-281)||(30463057-30463168)
chr7 (170-272)||(36117702-36117805)
chr7 (140-258)||(33774022-33774136)
chr7 (170-281)||(46095376-46095486)
chr7 (170-281)||(49100458-49100568)
chr7 (140-281)||(32775997-32776136)
chr7 (170-289)||(34064256-34064375)
chr7 (170-281)||(17266068-17266179)
chr7 (170-281)||(48981697-48981808)
chr7 (170-256)||(23703957-23704043)
chr7 (170-281)||(34963763-34963877)
chr7 (170-221)||(21387495-21387546)
chr7 (170-281)||(34001816-34001925)
chr7 (140-244)||(1643330-1643431)
chr7 (170-256)||(31581423-31581509)
chr7 (170-281)||(8150000-8150111)
chr7 (170-281)||(2849296-2849407)
chr7 (170-273)||(23186113-23186209)
chr7 (184-281)||(40803582-40803678)
chr7 (170-281)||(32971972-32972084)
chr7 (88-128)||(37157117-37157157)
chr7 (206-290)||(45890804-45890888)
chr7 (81-128)||(7426000-7426047)
chr7 (81-128)||(11616500-11616547)
chr7 (174-233)||(28923232-28923291)
chr7 (140-253)||(38589748-38589858)
chr7 (140-281)||(45218113-45218251)
chr7 (140-281)||(37264327-37264464)
chr7 (178-281)||(9658887-9658990)
chr7 (178-242)||(29997023-29997087)
chr7 (140-206)||(46288461-46288524)
chr7 (178-258)||(47238266-47238346)
chr7 (252-303)||(26938525-26938576)
chr7 (168-283)||(36070144-36070259)
chr7 (180-255)||(43780141-43780216)
chr7 (81-128)||(45890957-45891004)
chr7 (81-128)||(48981318-48981365)
chr7 (170-220)||(7456600-7456650)
chr7 (82-128)||(12308319-12308365)
chr7 (178-252)||(19688008-19688082)
chr7 (82-128)||(28923348-28923394)
chr7 (170-220)||(40590841-40590891)
chr7 (82-128)||(46288552-46288598)
chr7 (82-127)||(5724829-5724874)
chr7 (87-128)||(33774162-33774203)
chr7 (88-128)||(31581564-31581604)
chr7 (88-128)||(37491027-37491067)
chr7 (88-128)||(39498620-39498660)
chr7 (82-130)||(45480172-45480220)
[»] chr8 (67 HSPs)
chr8 (141-303)||(33190842-33191001)
chr8 (144-291)||(32241369-32241513)
chr8 (170-302)||(5392090-5392222)
chr8 (156-263)||(29730869-29730975)
chr8 (170-281)||(44790377-44790488)
chr8 (170-281)||(39171584-39171694)
chr8 (170-279)||(28802808-28802917)
chr8 (171-263)||(9014745-9014837)
chr8 (170-258)||(45425526-45425614)
chr8 (170-281)||(5962428-5962539)
chr8 (170-281)||(31410563-31410674)
chr8 (170-281)||(42412338-42412449)
chr8 (170-279)||(42558540-42558647)
chr8 (170-290)||(12957926-12958047)
chr8 (170-281)||(139063-139174)
chr8 (170-281)||(7258322-7258433)
chr8 (170-256)||(13084928-13085014)
chr8 (144-303)||(37219694-37219853)
chr8 (219-303)||(33925034-33925118)
chr8 (170-281)||(38252392-38252504)
chr8 (170-281)||(12653728-12653839)
chr8 (170-281)||(22324910-22325021)
chr8 (140-265)||(31132744-31132866)
chr8 (170-281)||(2349391-2349503)
chr8 (170-281)||(32967232-32967343)
chr8 (170-288)||(2195509-2195627)
chr8 (170-291)||(7042793-7042916)
chr8 (170-258)||(21587318-21587402)
chr8 (170-281)||(29615839-29615950)
chr8 (170-291)||(3384575-3384698)
chr8 (170-281)||(26677114-26677226)
chr8 (170-258)||(34133168-34133256)
chr8 (170-263)||(138674-138765)
chr8 (172-281)||(27973641-27973750)
chr8 (172-281)||(28030910-28031019)
chr8 (140-258)||(14689974-14690089)
chr8 (170-252)||(15559114-15559196)
chr8 (170-263)||(4274272-4274365)
chr8 (168-244)||(2119755-2119831)
chr8 (81-128)||(2119655-2119702)
chr8 (81-128)||(5391987-5392034)
chr8 (170-233)||(44615368-44615431)
chr8 (175-281)||(26570107-26570213)
chr8 (170-283)||(40077703-40077816)
chr8 (172-263)||(886652-886746)
chr8 (174-278)||(5423122-5423226)
chr8 (170-258)||(33743817-33743905)
chr8 (174-273)||(4480433-4480531)
chr8 (178-268)||(9734137-9734225)
chr8 (170-281)||(27868280-27868391)
chr8 (81-128)||(38252559-38252606)
chr8 (170-240)||(10728919-10728988)
chr8 (170-244)||(14748698-14748772)
chr8 (82-128)||(29567144-29567189)
chr8 (88-130)||(33826181-33826223)
chr8 (82-128)||(38908766-38908812)
chr8 (87-128)||(29615743-29615784)
chr8 (87-128)||(33191030-33191071)
chr8 (140-215)||(37459364-37459436)
chr8 (171-291)||(39416352-39416472)
chr8 (170-210)||(22490432-22490472)
chr8 (88-128)||(26570280-26570320)
chr8 (229-281)||(29638401-29638453)
chr8 (88-128)||(29730989-29731029)
chr8 (88-128)||(32241545-32241585)
chr8 (140-190)||(33925130-33925177)
chr8 (178-258)||(45420917-45420997)
[»] chr4 (93 HSPs)
chr4 (144-303)||(18849692-18849848)
chr4 (170-302)||(4360342-4360474)
chr4 (140-279)||(42024158-42024294)
chr4 (170-281)||(17237084-17237195)
chr4 (144-303)||(16493231-16493385)
chr4 (170-303)||(31862830-31862963)
chr4 (170-279)||(41710101-41710210)
chr4 (170-279)||(49306628-49306737)
chr4 (144-303)||(43421318-43421467)
chr4 (170-281)||(22872341-22872454)
chr4 (171-279)||(26185224-26185332)
chr4 (170-281)||(28974347-28974458)
chr4 (170-281)||(39979821-39979932)
chr4 (170-281)||(41203778-41203889)
chr4 (170-281)||(49812270-49812381)
chr4 (181-302)||(8295081-8295202)
chr4 (170-263)||(54729457-54729550)
chr4 (170-258)||(283455-283543)
chr4 (171-283)||(41436523-41436635)
chr4 (170-281)||(33047533-33047644)
chr4 (178-276)||(49448890-49448988)
chr4 (170-251)||(9093747-9093828)
chr4 (170-274)||(27977188-27977292)
chr4 (170-302)||(42185730-42185862)
chr4 (180-273)||(4357618-4357711)
chr4 (170-277)||(38977032-38977140)
chr4 (170-291)||(39976339-39976456)
chr4 (178-281)||(34021086-34021189)
chr4 (170-281)||(35909528-35909639)
chr4 (170-281)||(43334978-43335089)
chr4 (170-281)||(1825201-1825314)
chr4 (170-277)||(3686052-3686161)
chr4 (170-273)||(30568700-30568807)
chr4 (170-244)||(42544250-42544324)
chr4 (170-239)||(50328068-50328137)
chr4 (170-281)||(39258225-39258338)
chr4 (170-273)||(38160115-38160218)
chr4 (170-240)||(8065574-8065644)
chr4 (170-263)||(4727562-4727654)
chr4 (172-257)||(6506091-6506176)
chr4 (168-275)||(21240932-21241040)
chr4 (177-277)||(45290085-45290184)
chr4 (178-257)||(37309747-37309826)
chr4 (140-196)||(1796282-1796335)
chr4 (170-244)||(18509882-18509956)
chr4 (170-212)||(48740561-48740603)
chr4 (214-279)||(41371249-41371314)
chr4 (170-258)||(38319952-38320040)
chr4 (202-281)||(2906736-2906815)
chr4 (170-269)||(14009601-14009700)
chr4 (140-244)||(25149465-25149567)
chr4 (81-124)||(45289976-45290019)
chr4 (170-244)||(26799208-26799282)
chr4 (172-246)||(40881182-40881256)
chr4 (170-212)||(51527459-51527501)
chr4 (196-281)||(42670338-42670423)
chr4 (184-281)||(47787802-47787899)
chr4 (267-303)||(1796241-1796277)
chr4 (225-289)||(9778881-9778945)
chr4 (178-281)||(13529911-13530014)
chr4 (88-128)||(43335144-43335184)
chr4 (84-128)||(54729604-54729648)
chr4 (179-258)||(28330844-28330923)
chr4 (170-281)||(32559204-32559315)
chr4 (81-128)||(33047437-33047484)
chr4 (184-263)||(48262175-48262254)
chr4 (140-281)||(4354462-4354602)
chr4 (180-258)||(10309234-10309311)
chr4 (170-244)||(36047092-36047166)
chr4 (174-212)||(44020786-44020824)
chr4 (82-128)||(48740460-48740506)
chr4 (82-128)||(49812169-49812215)
chr4 (88-130)||(51572346-51572388)
chr4 (178-252)||(52677015-52677089)
chr4 (181-281)||(4485918-4486018)
chr4 (147-258)||(8759800-8759908)
chr4 (140-215)||(20964309-20964381)
chr4 (86-127)||(28974251-28974292)
chr4 (82-127)||(29644295-29644340)
chr4 (144-215)||(42132831-42132899)
chr4 (170-291)||(48400576-48400697)
chr4 (100-128)||(18873073-18873101)
chr4 (88-128)||(19688262-19688302)
chr4 (224-280)||(20879609-20879665)
chr4 (100-128)||(20964415-20964443)
chr4 (235-279)||(27655261-27655305)
chr4 (174-258)||(29136767-29136851)
chr4 (100-128)||(32323622-32323650)
chr4 (88-128)||(39979726-39979766)
chr4 (102-130)||(40293513-40293541)
chr4 (88-128)||(41436427-41436467)
chr4 (88-128)||(49448785-49448825)
chr4 (170-238)||(50714623-50714691)
[»] chr6 (27 HSPs)
chr6 (144-281)||(31265797-31265931)
chr6 (144-288)||(3604548-3604689)
chr6 (148-303)||(4238443-4238593)
chr6 (140-281)||(15081437-15081575)
chr6 (177-257)||(14306220-14306300)
chr6 (177-257)||(14312627-14312707)
chr6 (170-281)||(9755102-9755213)
chr6 (140-263)||(9354413-9354536)
chr6 (170-281)||(30063904-30064015)
chr6 (170-281)||(7301037-7301146)
chr6 (140-281)||(33921424-33921562)
chr6 (170-244)||(34915805-34915879)
chr6 (170-243)||(117120-117193)
chr6 (81-128)||(15081362-15081409)
chr6 (170-281)||(33109414-33109525)
chr6 (140-244)||(15371856-15371956)
chr6 (82-127)||(7359183-7359228)
chr6 (171-281)||(8569596-8569702)
chr6 (237-296)||(117974-118032)
chr6 (185-264)||(4611325-4611403)
chr6 (170-258)||(15321204-15321291)
chr6 (83-130)||(34915921-34915968)
chr6 (144-216)||(4552927-4552996)
chr6 (170-244)||(15355616-15355689)
chr6 (83-128)||(31265721-31265766)
chr6 (88-128)||(3604721-3604761)
chr6 (88-128)||(20383785-20383825)
[»] chr1 (80 HSPs)
chr1 (144-289)||(5442358-5442500)
chr1 (144-303)||(52432330-52432486)
chr1 (170-279)||(32348259-32348368)
chr1 (170-281)||(5040531-5040642)
chr1 (170-281)||(19532876-19532986)
chr1 (170-281)||(46536381-46536492)
chr1 (170-279)||(45889205-45889315)
chr1 (170-279)||(28839380-28839489)
chr1 (170-279)||(51749141-51749250)
chr1 (177-281)||(49944980-49945084)
chr1 (170-277)||(42926175-42926282)
chr1 (170-277)||(46496059-46496164)
chr1 (170-273)||(3555519-3555622)
chr1 (170-281)||(49494119-49494230)
chr1 (170-281)||(52830370-52830481)
chr1 (170-280)||(8773283-8773394)
chr1 (170-281)||(32587806-32587917)
chr1 (170-281)||(36467151-36467262)
chr1 (170-281)||(50267394-50267505)
chr1 (170-256)||(17342869-17342955)
chr1 (170-279)||(8327758-8327867)
chr1 (173-254)||(17724697-17724778)
chr1 (170-291)||(21304425-21304548)
chr1 (147-289)||(36784335-36784473)
chr1 (168-281)||(6787286-6787399)
chr1 (170-275)||(51848654-51848761)
chr1 (170-281)||(34813958-34814069)
chr1 (170-281)||(43895888-43895998)
chr1 (170-281)||(46880456-46880567)
chr1 (174-277)||(13500687-13500792)
chr1 (170-280)||(27391388-27391498)
chr1 (186-281)||(28908144-28908241)
chr1 (170-263)||(48242564-48242657)
chr1 (170-258)||(26756017-26756105)
chr1 (170-281)||(28276991-28277105)
chr1 (170-281)||(7785227-7785341)
chr1 (170-257)||(30749972-30750059)
chr1 (170-257)||(30771423-30771510)
chr1 (174-244)||(27831891-27831961)
chr1 (140-258)||(29756121-29756236)
chr1 (170-281)||(16040118-16040229)
chr1 (81-128)||(17342767-17342814)
chr1 (186-281)||(27698861-27698956)
chr1 (140-292)||(4466099-4466248)
chr1 (174-244)||(7787707-7787777)
chr1 (140-272)||(11425834-11425963)
chr1 (170-260)||(27932810-27932900)
chr1 (170-289)||(2571404-2571522)
chr1 (178-273)||(10370148-10370244)
chr1 (140-213)||(40754437-40754507)
chr1 (81-128)||(46536279-46536326)
chr1 (170-204)||(948620-948654)
chr1 (82-128)||(2219569-2219615)
chr1 (170-240)||(34877087-34877157)
chr1 (184-281)||(28706579-28706676)
chr1 (140-243)||(29225402-29225502)
chr1 (88-128)||(10370309-10370349)
chr1 (170-222)||(30903242-30903294)
chr1 (140-258)||(37541092-37541207)
chr1 (170-282)||(40061850-40061962)
chr1 (178-281)||(3718806-3718908)
chr1 (81-128)||(8773177-8773224)
chr1 (83-117)||(5442282-5442316)
chr1 (140-244)||(24131393-24131494)
chr1 (82-128)||(26583668-26583714)
chr1 (170-244)||(31798459-31798533)
chr1 (170-244)||(33149314-33149388)
chr1 (86-128)||(36784258-36784300)
chr1 (170-244)||(37925239-37925313)
chr1 (82-128)||(43895787-43895833)
chr1 (87-128)||(6784948-6784989)
chr1 (199-279)||(11324305-11324383)
chr1 (199-279)||(11482326-11482404)
chr1 (87-128)||(14358128-14358169)
chr1 (170-258)||(38664442-38664530)
chr1 (178-242)||(3160682-3160746)
chr1 (100-128)||(15290448-15290476)
chr1 (88-128)||(34877211-34877251)
chr1 (88-128)||(51049455-51049495)
chr1 (88-128)||(52830535-52830575)
[»] scaffold0006 (1 HSPs)
scaffold0006 (140-289)||(229837-229982)
[»] scaffold0034 (1 HSPs)
scaffold0034 (170-302)||(98866-98998)
[»] scaffold0007 (2 HSPs)
scaffold0007 (144-303)||(230274-230429)
scaffold0007 (86-128)||(230201-230243)
[»] scaffold0321 (1 HSPs)
scaffold0321 (171-258)||(9530-9617)
[»] scaffold0058 (1 HSPs)
scaffold0058 (170-281)||(14497-14608)
[»] scaffold0028 (1 HSPs)
scaffold0028 (170-275)||(26654-26752)
[»] scaffold0221 (1 HSPs)
scaffold0221 (170-212)||(8928-8970)
[»] scaffold0227 (1 HSPs)
scaffold0227 (214-281)||(8951-9018)
[»] scaffold0576 (1 HSPs)
scaffold0576 (170-244)||(606-679)
[»] scaffold0045 (1 HSPs)
scaffold0045 (170-212)||(26363-26405)
[»] scaffold0020 (1 HSPs)
scaffold0020 (170-244)||(171267-171341)


Alignment Details
Target: chr2 (Bit Score: 114; Significance: 8e-58; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 140 - 303
Target Start/End: Original strand, 3100414 - 3100574
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  3100414 atactactttcacaacttccaatttaata---tattccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaaaatcatttt 3100510  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||| ||||||    
T  3100511 tctctctccttcatttatatatttgttttaatacgtgcgaaaagaaaaaatggctcaactaatt 3100574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 140 - 303
Target Start/End: Original strand, 28572222 - 28572381
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||   |||| || ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| || |||    
T  28572222 atactactttcacaacttccaattcaata---tatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatca-ttt 28572317  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| ||||| ||||||| |||| | ||||||||||||||| |||||||||| ||||||||||    
T  28572318 tctctctcctttatttatacatttgtcttaatatgtgtgaaatgaaaaaatggctcagctaatt 28572381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 5212051 - 5211891
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||| ||||| ||||   ||||||||||||||||||||||||| || ||||||| |||| ||||||||| |||||||||| |||||    
T  5212051 atactactttcacaactttcaattcaata---tattccactttgcatttatgatagttgataatgcacaaatacttaacaagagcacttaaaactatttt 5211955  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    || || | ||||||||||| |||| ||||||||||||||||| |||||||||| || |||||||    
T  5211954 tccctcttcttcatttatacatttgttttaatatgtgtgaaatgaaaaaatggctcggctaatt 5211891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 44534576 - 44534418
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||| ||||||| ||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||| ||||||    
T  44534576 atactaatttcacagcttccaattcaata---tattccactttgcatttatgatagtggagaatgtaccaatacttaacaagaacatttaaaatcatttt 44534480  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    | ||| ||||||||||||| |||| | ||||||  |||||||||||||||||| ||||||||||    
T  44534479 tttctgtccttcatttatacatttgtcttaata--tgtgaaaagaaaaaatggctcagctaatt 44534418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 15859431 - 15859278
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    ||||||||||||||| |||| ||||   |||| ||||||||||||||    ||||||||||| |||||| ||||||| |  ||||||||| |||||||||    
T  15859431 tactttcacaacttctaattcaata---tatttcactttgcatttatt---gtggagaatgccccaatacttaacaaaagtacttaaaactatttttctc 15859338  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  15859337 tctccttcatttatatatttgtcttaatatgtgtgaaaagaaaaaatggttcagctaatt 15859278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 28301475 - 28301584
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||    
T  28301475 tatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaaccatttttctctttccttcatttatacatttgtctta 28301574  T
Q  270 atatgtgtga 279  Q
    |||| |||||    
T  28301575 atatatgtga 28301584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 31546084 - 31545973
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||||||||||||| |||||  | ||||||||||||| |||| |||||    
T  31546084 tatattccactttgcatttgtgatagtggagagtgcatcaatatttaacaagatcacttaaaaccacttttccttctccttcatttatacatttttttta 31545985  T
Q  270 atatgtgtgaaa 281  Q
    |||| |||||||    
T  31545984 atatatgtgaaa 31545973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 28108441 - 28108330
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||  |||||||||| |||||||||| |||||||||||||  ||| | |||    
T  28108441 tatattccactttacatgtatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttataattttttctta 28108342  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  28108341 atacgtgtgaaa 28108330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 281
Target Start/End: Original strand, 28526982 - 28527116
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| ||||   || |||||||| ||| |||| ||||| ||||||||| |||| ||||||||| ||||||||||||||||| |     
T  28526982 tactttcacaacttccaattcaata---tagtccactttacatatatggtagtgaagaatgcacgaatacttaacaagagcacttaaaaccatttttttt 28527078  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    | ||||||||||||| |||| | |||||||||||||||    
T  28527079 tctccttcatttatacatttttcttaatatgtgtgaaa 28527116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 565135 - 565237
Alignment:
Q  175 tccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatg 274  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| | |||||||| |||| |||| | |||| |||    
T  565135 tccactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaatcatttttctttctccttcatatatacatttttcttaaaatg 565234  T
Q  275 tgt 277  Q
    |||    
T  565235 tgt 565237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 2882026 - 2882119
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| | || |||||||||| ||||    
T  2882026 tatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttctatctctttcatttatacattt 2882119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 37247950 - 37247841
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||| |||||| |||||||||| |||||| |||| | |||    
T  37247950 tatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactatttttttctttccttcttttatacatttgtctta 37247851  T
Q  270 atatgtgtga 279  Q
    |||| |||||    
T  37247850 atatatgtga 37247841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 23685000 - 23685111
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||| | |||||||| ||||| ||||||| |||| | |||    
T  23685000 tatatttcactttgcatttatgatagtggagaatgcactaatacttaacaaaaacacttaaaactaattttctctctcctttatttatacatttttctta 23685099  T
Q  270 atatgtgtgaaa 281  Q
    ||||| ||||||    
T  23685100 atatgcgtgaaa 23685111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 24775874 - 24775765
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| |||||||||||||||||||| |||||||| ||||||||  |||||||||  |||||||||| ||||||||||||| |||  ||| |    
T  24775874 tatatttcactttacatttatgatagtggagaatacaccaatacttaacaagtgcacttaaaattatttttctctctccttcatttatacatt--tttca 24775777  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  24775776 atatgtgtgaaa 24775765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 18181278 - 18181167
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaa 270  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||| ||  ||| ||||| | || | ||||    
T  18181278 atattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttctctctctctcacttatacacttttcttaa 18181179  T
Q  271 tatgtgtgaaaa 282  Q
    | ||||||||||    
T  18181178 tctgtgtgaaaa 18181167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 28925914 - 28925803
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| || |||||||||||||||||||| ||||| ||||||||  |||||||||| |||||||||| ||||| ||||||| |||| | |||    
T  28925914 tatatttcactttacaattatgatagtggagaatgcatcaatacttaacaagtgcacttaaaactatttttctctctcctttatttatacatttttctta 28925815  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  28925814 atacgtgtgaaa 28925803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 43077792 - 43077681
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||||| |||||| |||||||||||||||||||||  || ||||||| |||||||||| || |||||||||| |||| | |||    
T  43077792 tatatttcactttacatttatgacagtggaaaatgcaccaatagttaacaagtacatttaaaactatttttctctctcattcatttatacatttgtctta 43077693  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  43077692 atacgtgtgaaa 43077681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 7650041 - 7649933
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||||| |||||||||  ||||| | || ||||||||||||| |||| || ||    
T  7650041 tatattccactttgcatttatgatagtggagaatgcatcagtacttaacaagagcacttaaaa-tattttgcgctctccttcatttatacattttttatt 7649943  T
Q  269 aatatgtgtg 278  Q
    ||||||||||    
T  7649942 aatatgtgtg 7649933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 30757634 - 30757529
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||| ||| |||||||||||||||| ||||||  |||| ||||||||  |||||||||| |||||||||| ||||||||||||| |||| | |||    
T  30757634 tatattccaatttacatttatgatagtggaaaatgcattaatacttaacaagtgcacttaaaactatttttctctctccttcatttatacatttttctta 30757535  T
Q  270 atatgt 275  Q
    ||||||    
T  30757534 atatgt 30757529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 435144 - 435031
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttat--atatttattt 267  Q
    |||||| |||||| |||||||||||||||||||||||| |||| ||||||||  |||||||||| |||||| ||| || |||||||||  |||||| | |    
T  435144 tatatttcactttacatttatgatagtggagaatgcactaatatttaacaagtgcacttaaaactatttttgtctctctttcatttatacatatttttct 435045  T
Q  268 taatatgtgtgaaa 281  Q
    ||||| ||||||||    
T  435044 taatacgtgtgaaa 435031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 3123676 - 3123798
Alignment:
Q  159 caatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||| |||| ||||||||| |||| ||||||||||||| |||||||||||||| ||||  | | |||||||||  |||||||||| | ||||| |||||    
T  3123676 caattcaatactatattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaaagcacttaaaattatttttctctctacttcagttata 3123775  T
Q  259 tatttattttaatatgtgtgaaa 281  Q
     |||| | |||||||||||||||    
T  3123776 catttttcttaatatgtgtgaaa 3123798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 277
Target Start/End: Complemental strand, 33602303 - 33602185
Alignment:
Q  159 caatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||||  |||||||| ||||||||||||||||| |   || || |||||||    
T  33602303 caattcaatattatattccactttgcatttatgatggtgaagaatgcactaatacataacaagagcacttaaaaccattttttttcctcttttatttata 33602204  T
Q  259 tatttattttaatatgtgt 277  Q
     |||| | |||||||||||    
T  33602203 catttttcttaatatgtgt 33602185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 33755298 - 33755407
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||| ||||||||||||||||   |||||  ||||||| ||||||| | ||||||||| ||||||||||| ||||||||||||| |||| | |||    
T  33755298 tatattccattttgcatttatgatagaaaagaatagaccaatacttaacaataacacttaaaatcatttttctctctccttcatttatacatttgtctta 33755397  T
Q  270 atatgtgtga 279  Q
    ||| ||||||    
T  33755398 atacgtgtga 33755407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 2048333 - 2048444
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| |||||||||||||||||    ||||||||||||||||| | |||| |||| | |||||||||||||| || |||| ||||| |||| |||||    
T  2048333 tatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcacttatacatttttttta 2048432  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  2048433 ataagtgtgaaa 2048444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 8550700 - 8550597
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgt 277  Q
    ||||||||||||||||| |||||||||||| |||| || |||||| |||||||||||| |||||||| || |||| ||||| |||| | | ||| |||||    
T  8550700 actttgcatttatgataatggagaatgcacaaatacttgacaagaacacttaaaaccacttttctctctctttcacttatacatttttctaaatgtgtgt 8550601  T
Q  278 gaaa 281  Q
    ||||    
T  8550600 gaaa 8550597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 41436120 - 41436230
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||||||| | |||||||||  | |||||||| |  |||||||||| |||| | |||    
T  41436120 tatattccactttgcatttatgatagtgaagaatacatcaatacttaacaaaaacacttaaaatta-ttttctctctaattcatttatacatttttctta 41436218  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  41436219 atatgtgtgaaa 41436230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 36103367 - 36103265
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||| |||  ||| |||||||||||||||||| | ||| ||||||||| ||||||||| ||||||||||| |||||||||| || |||| | |||    
T  36103367 tatattccattttatattcatgatagtggagaatgcatcgatacttaacaagaacacttaaaatcatttttctctctccttcatttgtacatttttctta 36103268  T
Q  270 ata 272  Q
    |||    
T  36103267 ata 36103265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 36155574 - 36155664
Alignment:
Q  190 tgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatata-tttattttaatatgtgtga 279  Q
    ||||| |||||||| |||||||| ||||||||| ||||||||| ||||||| ||| ||||||||||||| | ||||| |||||||||||||    
T  36155574 tgatattggagaatacaccaatacttaacaagagcacttaaaatcatttttttctctccttcatttatacattttatcttaatatgtgtga 36155664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 36396544 - 36396431
Alignment:
Q  147 tttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctcttt 246  Q
    |||||||||||  |||||||||   ||||  ||||||||||||||| |||||||||||||| |||| | | ||||| ||||||||||||||||||||| |    
T  36396544 tttcacaacttttaatttaata---tattatactttgcatttatgacagtggagaatgcactaatactcatcaagagcacttaaaaccatttttctctat 36396448  T
Q  247 ccttcatttatatattt 263  Q
     ||| ||||||| ||||    
T  36396447 actttatttatacattt 36396431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 13375248 - 13375143
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaata-gttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgt 275  Q
    |||||| |||||||||||||||||||||||||||||  |||||||   |||||||||  |||| ||||| ||||||||||||| |||| | |||||| ||    
T  13375248 cactttacatttatgatagtggagaatgcaccaataccttaacaactgcacttaaaattatttatctctctccttcatttatacatttttcttaatacgt 13375149  T
Q  276 gtgaaa 281  Q
    ||||||    
T  13375148 gtgaaa 13375143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 291
Target Start/End: Original strand, 10818669 - 10818784
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttc-atttatatatttattttaatatgt 275  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||   | ||||||||||||||||| ||||||  |||||| |||| | || ||| ||    
T  10818669 cactttgcatttatgatactagagaatgcaccaatacttaacaagagtgcataaaaccatttttctctctccttcgttttatacatttttcttgatacgt 10818768  T
Q  276 gtgaaaagaaaaaatg 291  Q
    |||||| ||| |||||    
T  10818769 gtgaaatgaacaaatg 10818784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 11726788 - 11726681
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| |||||||| ||||||||||||||||||||  ||||  |||||| |  ||||||||| |||||||||| |||||||| |||| |||| | |||    
T  11726788 tatattctactttgcaattatgatagtggagaatgcattaatacataacaatagtacttaaaactatttttctctctccttcatctatacatttttgtta 11726689  T
Q  270 atatgtgt 277  Q
    ||| ||||    
T  11726688 atacgtgt 11726681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 43950514 - 43950403
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| |||||||||||||| || |||| ||| || ||||| ||||||| | || ||||||| |||||||||| || |||| ||||| |||| |||||    
T  43950514 tatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctctctttcacttatacatttttttta 43950415  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  43950414 ataagtgtgaaa 43950403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 2756702 - 2756826
Alignment:
Q  154 acttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcat 253  Q
    |||||||||||||||   ||||| ||||| ||||||||||| |||  ||||||| |||| || |||||| |||||||||  |||||||||| | ||||||    
T  2756702 acttccaatttaata---tattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctcttcttcat 2756798  T
Q  254 ttatatatttattttaatatgtgtgaaa 281  Q
    | ||| |||| | |||||| ||||||||    
T  2756799 taatacatttttcttaataagtgtgaaa 2756826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 8031790 - 8031886
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtg 276  Q
    ||||||||||||||||| |||||||| || ||||| ||||||||| ||| ||||| ||||||||||  || || |||||||||||| | ||||| ||||    
T  8031790 actttgcatttatgataatggagaatacatcaatacttaacaagaacacataaaatcatttttctc--tctttaatttatatatttttcttaatgtgtg 8031886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 292
Target Start/End: Original strand, 7213489 - 7213638
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||  ||||| ||||   ||||||||||| ||||||| |||  | |||||||||||||| || | ||   |||| |||| ||||||    
T  7213489 atactactttcacaactctcaattcaata---tattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttt 7213585  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatgg 292  Q
    ||||| |  |||||||||| |||| | ||||| ||||||||| || |||||||    
T  7213586 tctctctatttcatttatacatttttcttaatctgtgtgaaatgagaaaatgg 7213638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 288
Target Start/End: Complemental strand, 38280254 - 38280144
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgt 277  Q
    ||||| |||||||||||  | |||||||||||||| |||| ||   |||| |||||||||||||||| |  ||| |||||| |||| | |||||||||||    
T  38280254 actttacatttatgataaagaagaatgcaccaatatttaaaaaaggcactcaaaaccatttttctctctatttcctttatacatttttcttaatatgtgt 38280155  T
Q  278 gaaaagaaaaa 288  Q
    |||| ||||||    
T  38280154 gaaatgaaaaa 38280144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 9724919 - 9725040
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||  | |||||||||||||| || | || | |||| |||| ||||| ||||| || |||||||||| | || | |||    
T  9724919 tatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcactcaaaatcatttctctctctctttcatttatacacttttctta 9725018  T
Q  270 atatgtgtgaaaagaaaaaatg 291  Q
    |||||||||||| || ||||||    
T  9725019 atatgtgtgaaatgagaaaatg 9725040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 291
Target Start/End: Complemental strand, 37529160 - 37529016
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    ||||||||| |||||||||| |||    ||||| ||||| |||||||||||  | | |||  ||||||| |||||||   |||| |||||||||||||||    
T  37529160 tactttcaccacttccaattcaatt---tattctactttacatttatgataaagaaaaatagaccaatacttaacaaagacactcaaaaccatttttctc 37529064  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatg 291  Q
    | ||||| | | |||||||| |||||||| |||||||| ||| |||||    
T  37529063 tatcctttactaatatattttttttaataagtgtgaaatgaacaaatg 37529016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 281
Target Start/End: Original strand, 13222086 - 13222221
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    ||||||||| |||||||||| ||||   ||||  |||||||||||||||||  | ||||| ||||||||||| | |||  |||| ||| |||||||||||    
T  13222086 tactttcaccacttccaattcaata---tattttactttgcatttatgataaagaagaatacaccaatagttgataagggcactcaaacccatttttctc 13222182  T
Q  244 tttccttcatttatatatttatt-ttaatatgtgtgaaa 281  Q
    | || |||| ||||| |||| || |||||| ||||||||    
T  13222183 tctctttcacttatacattttttcttaataagtgtgaaa 13222221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 33602393 - 33602353
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  33602393 aaaataactgatctatttcacttttcaatacaatattaatt 33602353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 435244 - 435205
Alignment:
Q  89 aaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  435244 aaatgactgaactatttcacttttcaatacaatattaatt 435205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 3100339 - 3100386
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||    
T  3100339 gtgtctcaaaataactgagtcatttcacttttcaatacaatattaatt 3100386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 6213916 - 6213805
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||||||||||||||| |||  |||| | ||||| || || ||| ||||||||| |||||||||||||| |||| | ||  |||| | |||    
T  6213916 tatattctactttgcatttatgataatggtaaatgaagcaatacttgacgagaacacttaaaatcatttttctctttcattcactaattcatttttctta 6213817  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  6213816 ataagtgtgaaa 6213805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 10069651 - 10069540
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||||||||||||||| |||  ||||||| |||| || |||| |  |||||||| ||||||| ||| || |||| |||||||||| | |||    
T  10069651 tatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctttcacttatatatttttctta 10069552  T
Q  270 atatgtgtgaaa 281  Q
    ||  ||||||||    
T  10069551 atgagtgtgaaa 10069540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 44194687 - 44194750
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaac 233  Q
    ||||||||||||||||||||||||||  ||||||||||| ||  ||||||||| ||| ||||||    
T  44194687 tatattccactttgcatttatgataggcgagaatgcaccgatgcttaacaagaacacataaaac 44194750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 3199912 - 3200024
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||  |||||||||||||||||    | ||||||| ||||||||||||   |||| |||||||||||    
T  3199912 atactactttcaccactcccaattcaata---tattatactttgcatttatgataa---aaaatgcacaaatagttaacaatgacactcaaaaccatttt 3200005  T
Q  240 tctctttccttcatttata 258  Q
    ||||| || ||||||||||    
T  3200006 tctctctctttcatttata 3200024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 13375641 - 13375595
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||   |||||||||||||||||||||||||||    
T  13375641 tgtctcaaaataactgagtcatttcacttttcaatacaatattaatt 13375595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 42881440 - 42881398
Alignment:
Q  86 tcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  42881440 tcaaaataactgaatcatttcacttttcaatacaatattaatt 42881398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 44534654 - 44534608
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||   |||||||||||||||||||||||||||    
T  44534654 tgtctcaaaataactgagtcatttcacttttcaatacaatattaatt 44534608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 39095672 - 39095765
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    ||||||||||||||||||||||||| ||||||||| | ||||| ||  | ||| ||||| |||  |||||| ||| | ||||||||||| ||||    
T  39095672 tatattccactttgcatttatgataatggagaatgtatcaatacttctcgagaacacttcaaatgatttttttctctacttcatttatacattt 39095765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 40965109 - 40965166
Alignment:
Q  224 cacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||||||| |||||||||| ||||||||||||| |||| | |||||| ||||||||    
T  40965109 cacttaaaactatttttctctctccttcatttatacatttttcttaatacgtgtgaaa 40965166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 314468 - 314556
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||| |||||||||||||||||  | |||||||| |||||||| | |||  |||| ||||||||||| |||| || |||| |||||    
T  314468 tatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcacttata 314556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 5212119 - 5212079
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  5212119 aaaataactgagttatttcacttttcaatacaatattaatt 5212079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 6972606 - 6972495
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| |||||||||||||||||  | ||||||||| ||||||| | |||  |||| ||||||| |||||||| || |||| ||||| |||| || ||    
T  6972606 tatattctactttgcatttatgataaagaagaatgcacaaatagttgataagggcactcaaaacca-ttttctctctctttcacttatacattttttctt 6972508  T
Q  269 aatatgtgtgaaa 281  Q
    |||| ||||||||    
T  6972507 aataagtgtgaaa 6972495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 18181375 - 18181335
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  18181375 aaaataactgacccatttcacttttcaatacaatattaatt 18181335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 32556228 - 32556333
Alignment:
Q  185 atttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaaga 284  Q
    |||||||||  ||| ||||||||||||| || |||||   |||||||||||||||||||  || |||| ||||| | || | ||||||||||||||| ||    
T  32556228 atttatgatgatggtgaatgcaccaatacttgacaaggatacttaaaaccatttttctc--tctttcacttatacacttttcttaatatgtgtgaaatga 32556325  T
Q  285 aaaaatgg 292  Q
    | ||||||    
T  32556326 acaaatgg 32556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 44194598 - 44194638
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  44194598 aaaataactgaatcatttcacttttcaatacaatattaatt 44194638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 28572150 - 28572197
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| ||||||||||||   |||||||||||||||||||||||||||    
T  28572150 gtgtcccaaaataactgagtcatttcacttttcaatacaatattaatt 28572197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 811358 - 811416
Alignment:
Q  186 tttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||||| |||  |||||||||||||||||||||| || | |||||||| |||||||    
T  811358 tttatgatattggtaaatgcaccaatagttaacaagaacattcaaaaccatgtttctct 811416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 41436023 - 41436065
Alignment:
Q  86 tcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||   |||||||||||||||||||||||||||    
T  41436023 tcaaaataactgagtcatttcacttttcaatacaatattaatt 41436065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 45464291 - 45464170
Alignment:
Q  159 caatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||| ||| ||| | |||||||| |||||| ||   ||||||| || | ||||||||| || |||||| ||||||| ||| || |||| |||||    
T  45464291 caatttaata-tatcttctattttgcattaatgataatgattaatgcacaaacacttaacaagagcatttaaaatcatttttttctctcattcacttata 45464193  T
Q  259 tatttattttaatatgtgtgaaa 281  Q
     |||| | |||||||||||||||    
T  45464192 catttttcttaatatgtgtgaaa 45464170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 12872945 - 12872986
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||  |||||||||||||||| |||||||||||    
T  12872945 caaaataactgacatatttcacttttcaattcaatattaatt 12872986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 14384119 - 14384066
Alignment:
Q  229 aaaaccatttttctctttccttcatttatatatttatt-ttaatatgtgtgaaa 281  Q
    |||||||||||||||| || ||||||||||||||| || ||||||||| |||||    
T  14384119 aaaaccatttttctctctctttcatttatatattttttcttaatatgtatgaaa 14384066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 3123585 - 3123629
Alignment:
Q  84 tctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||   |||||||||| ||||||||||||||||    
T  3123585 tctcaaaataactgagtcatttcactttccaatacaatattaatt 3123629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 7650136 - 7650096
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||  ||||||||||| |||||||||||||||    
T  7650136 aaaataactgaatcatttcacttttaaatacaatattaatt 7650096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 8385022 - 8385062
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||| |||  ||||||||||||||||||||||||||||    
T  8385022 aaaataattgacttatttcacttttcaatacaatattaatt 8385062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 17154405 - 17154377
Alignment:
Q  100 ctatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||||||||||||||    
T  17154405 ctatttcacttttcaatacaatattaatt 17154377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 19009791 - 19009831
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||| ||| | |||||||||||||||||||||||||||    
T  19009791 aaaataattgatcaatttcacttttcaatacaatattaatt 19009831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 28526910 - 28526950
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||  |||||||||||||||| ||||||||||    
T  28526910 aaaataactgaatcatttcacttttcaatataatattaatt 28526950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 35646183 - 35646023
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||||||||| |||| ||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  35646183 atactactttcacaacttctaattcaata---tattccactttgcatttatgatagtggagaatgcaccaatacttaacaagatcacttaaaatcatttt 35646087  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| || ||||||||||||||| | |||||||||||||||||||||||||  ||||||||||    
T  35646086 tctctctcattcatttatatatttgtcttaatatgtgtgaaaagaaaaaatgactcagctaatt 35646023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 8692908 - 8692751
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||||||||   |||| || ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  8692908 tactttcacaacttccaatttaata---tatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccatttttctc 8692812  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaa-aaaatggttcagctaatt 303  Q
      |||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||    
T  8692811 cctccttcatttatatatttgtcttaatatgtgtgaaaagaaaaaaatggctcagctaatt 8692751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 42575732 - 42575572
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||||    
T  42575732 atactactttcacaacttccaattcaata---tattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcacttaaaaccatttt 42575636  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| || |||||||||| |||| | ||||||||||||||| |||||||||| ||||||||||    
T  42575635 tctctctcattcatttatacatttgtcttaatatgtgtgaaatgaaaaaatggctcagctaatt 42575572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 8369790 - 8369634
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||    
T  8369790 atactactttcacaactttcaattcaata---tattccactttgcatttatgatagtggagaatgcaccaatacttaacaagagcatttaaaacaatttt 8369694  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| |||    |||||| |||| | ||||||  ||||||| |||||||||||||||||||||    
T  8369693 tctctctcc----tttatacatttgtcttaatacatgtgaaatgaaaaaatggttcagctaatt 8369634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 22582965 - 22582808
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||     ||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||| ||||||    
T  22582965 atactactttcacaacttccaattcaata----tttccactttgcatttatgatagtggagaatgcatcattacttaacaagagcacttaaaatcatttt 22582870  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| |  ||||||||||||||| | |||||||||||  ||| ||||||||| ||||||||||    
T  22582869 tctctcttattcatttatatatttgtcttaatatgtgt--aaaaaaaaaatggctcagctaatt 22582808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 302
Target Start/End: Original strand, 39008143 - 39008305
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagt----ggagaatgcaccaatagttaacaagatcacttaaaacca 235  Q
    |||||||||||| ||||||||||| ||||   |||| |||||| |||||||||||||    |||||||| ||||||| ||||||||| ||||||||||||    
T  39008143 atactactttca-aacttccaattcaata---tatttcactttacatttatgatagttagtggagaatgaaccaatacttaacaagagcacttaaaacca 39008238  T
Q  236 tttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaat 302  Q
    ||||||||| ||||||||||||| |||| ||||||||||||| ||| |||||||||| |||||||||    
T  39008239 tttttctctctccttcatttatacatttgttttaatatgtgtaaaatgaaaaaatggctcagctaat 39008305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 3725227 - 3725338
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| |||||| |||||| |||| | |||    
T  3725227 tatattccactatgcatttatgatagtggagaatgcaccaatacttaacaatagcacttaaaaccatttttctctctccttcctttatacatttttctta 3725326  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  3725327 atatgtgtgaaa 3725338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 11099544 - 11099433
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||| || |||||||||| |||| | |||    
T  11099544 tatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactatttttctctctctttcatttatacatttttctta 11099445  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  11099444 atatgtgtgaaa 11099433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 33988241 - 33988350
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||| | ||||||||||||| |||| | |||    
T  33988241 tatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacacttaaaaccatttttctttctccttcatttatacatttgtctta 33988340  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  33988341 atatgtgtga 33988350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 7613748 - 7613855
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||| ||||||| |||| | |||    
T  7613748 tatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctttccttaatttatacatttttctta 7613847  T
Q  270 atatgtgt 277  Q
    ||||||||    
T  7613848 atatgtgt 7613855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 16283654 - 16283543
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||| |||| |||||||||||||| ||| ||||||||||||| |||| |||||    
T  16283654 tatattccactttgcatttatgatagttgagaatgcaccaatacataacaaaatcatttaaaaccatttttttctctccttcatttatacatttttttta 16283555  T
Q  270 atatgtgtgaaa 281  Q
    |||  |||||||    
T  16283554 atacatgtgaaa 16283543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 35334593 - 35334484
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||  || |||| |||| |||| |||||||||| |||||||||| |||||||||||||||||| | |||    
T  35334593 tatattccactttgcatttatgatagtggagaatagacaaatacttaataagagcacttaaaactatttttctctctccttcatttatatatttgtctta 35334494  T
Q  270 atatgtgtga 279  Q
    |||| |||||    
T  35334493 atatctgtga 35334484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 858376 - 858487
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| || ||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||| |||| | |||    
T  858376 tatatttcattttgcatttatgataatggagaatgtaccaatatttaacaagataacttaaaaccatttttttctctcctttatttatacatttttctta 858475  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  858476 atatgtgtgaaa 858487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 17243021 - 17242912
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||| ||||||  ||||||| |||||||||  ||| |||||||||||||||| || |||||||||| |||| | |||    
T  17243021 tatattccactttgcatttatgatagtagagaatagaccaatacttaacaagagtactaaaaaccatttttctctctcattcatttatacatttgtctta 17242922  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  17242921 atatgtgtga 17242912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 25814405 - 25814516
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| |||||||||||||||| |||| ||||||| ||||||||  |||||||||| |||||||||| ||||||||||||  |||| | |||    
T  25814405 tatatttcactttacatttatgatagtggataatgtaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttatgcatttttctta 25814504  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  25814505 atacgtgtgaaa 25814516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 36469153 - 36469050
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgt 277  Q
    |||||||||||||||||||||||||||||||||||  |||||| | |||||| || ||||||| | | ||||||||||||| |||| | |||||||||||    
T  36469153 actttgcatttatgatagtggagaatgcaccaatacataacaaaaacacttataatcatttttttatctccttcatttatacatttttcttaatatgtgt 36469054  T
Q  278 gaaa 281  Q
    ||||    
T  36469053 gaaa 36469050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 39183694 - 39183583
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||| | | ||||||||| ||||||| ||| |  |||||||||| |||| | |||    
T  39183694 tatattccactttgcatttatgatagtggagaattcatcaatacttaacgaaagcacttaaaatcatttttatctctttttcatttatacatttttctta 39183595  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  39183594 atatgtgtgaaa 39183583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 42211374 - 42211481
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| ||||||||||||||||||||||| ||| ||    || ||||||||| ||||||||||||||||||||   |||||||||||| |||| |||||    
T  42211374 tatatttcactttgcatttatgatagtggaaaataca----tacttaacaagagcacttaaaaccatttttctcccaccttcatttatacatttttttta 42211469  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  42211470 atatgtgtgaaa 42211481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 6610878 - 6610989
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||||||||||||||||||||||||| |||| || | ||||||||  ||||||||||| ||||||||| ||| |||| | |||    
T  6610878 tatatttcactttacatttatgatagtggagaatgcaccaatacttaataaaaacacttaaactcatttttctctctccttcattgatacatttttctta 6610977  T
Q  270 atatgtgtgaaa 281  Q
    || | |||||||    
T  6610978 atctatgtgaaa 6610989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 280
Target Start/End: Complemental strand, 36446746 - 36446644
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgt 277  Q
    |||||||||||||||||||||||||||||| ||||  |||||| | |||||| || ||||||| | | ||||||||||||| |||| | |||||||||||    
T  36446746 actttgcatttatgatagtggagaatgcacaaatacataacaaaaacacttataatcatttttttatctccttcatttatacatttttcttaatatgtgt 36446647  T
Q  278 gaa 280  Q
    |||    
T  36446646 gaa 36446644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 32539717 - 32539814
Alignment:
Q  184 catttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||||||||||||||||||||||||||  ||| || | ||||||||||||| ||| ||| |||||| |||||  |||||| |||||||||||||||    
T  32539717 catttatgatagtggagaatgcaccaatacataataaaagcacttaaaaccatctttgtctctccttcgtttattcatttatcttaatatgtgtgaaa 32539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 5147563 - 5147451
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| |||||||||||||||||  | ||||||||||||||||| | |||  |||| |||| |||||||||||||| |||| |||||||||| || ||    
T  5147563 tatattctactttgcatttatgataaagaagaatgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatatattttttctt 5147464  T
Q  269 aatatgtgtgaaa 281  Q
    |||| ||||||||    
T  5147463 aataagtgtgaaa 5147451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 4576472 - 4576366
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatat 273  Q
    ||||| ||||||||||||||| ||| || |||||||||| || |||||| ||||||||||  |||||||||||  |||||||||| |||| | |||||||    
T  4576472 ttccattttgcatttatgataatggtga-tgcaccaatacttgacaagaacacttaaaactgtttttctctttttttcatttatacatttttcttaatat 4576374  T
Q  274 gtgtgaaa 281  Q
    ||||||||    
T  4576373 gtgtgaaa 4576366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 15254806 - 15254917
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| | |||||||| ||||||| ||||||||||| ||||  |||||| | ||||||||| ||||||||| |||||| |||||||| |||| | |||    
T  15254806 tatattctaatttgcattaatgatagcggagaatgcactaatacataacaaaaacacttaaaatcatttttctttttcctccatttatacatttttctta 15254905  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  15254906 atacgtgtgaaa 15254917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 35585683 - 35585572
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||||  |||||||||||||| |||||| ||||| |||||||||  | |||||| ||||||||| |||||  |||||||| |||| | |||    
T  35585683 tatatttcactttgtctttatgatagtggataatgcatcaatacttaacaagaatatttaaaatcatttttctttttcccccatttatacatttttctta 35585584  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  35585583 atatgtgtgaaa 35585572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 296
Target Start/End: Complemental strand, 39060513 - 39060363
Alignment:
Q  143 ctactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttct 242  Q
    |||||||||| |||||||||  ||||   || || |||||||||||||||||  | |||||| ||||||| |||||||   |||| ||||||||||||||    
T  39060513 ctactttcaccacttccaatacaata---tagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttct 39060417  T
Q  243 ctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttca 296  Q
    || ||||||| | |||||||| | |||||| |||||||| ||  ||||||||||    
T  39060416 ctctccttcactaatatatttttcttaataagtgtgaaatgagcaaatggttca 39060363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 24231051 - 24231125
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||| || |||||| |||||||||||    
T  24231051 tatattccactttccatttatggtagtggagaatgcatcaatacttaacaagaacagttaaaatcatttttctct 24231125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 15814701 - 15814794
Alignment:
Q  188 tatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||||||||| ||| ||| |||| ||||||||| | |||||||  |||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  15814701 tatgatagtggaaaatacacaaatacttaacaagagcgcttaaaataatttttctctctccttcatttatacattttttttaatatatgtgaaa 15814794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 33012395 - 33012483
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||| |||| | | ||||| |||||||| |||| ||||||||| ||||||||||||||||| ||| | |||||||||||    
T  33012395 tatattccactttgaatttctaagagtggtgaatgcacaaatacttaacaagagcacttaaaaccatttttatctcttcttcatttata 33012483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 5357884 - 5357758
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||  | |||||| ||||||| |||||||   |||| |||||||||||||||| ||||||| | |||||||| | |||    
T  5357884 tatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatttttctctctccttcactaatatatttttctta 5357785  T
Q  270 atatgtgtgaaaagaaaaaatggttca 296  Q
    ||| ||||| || ||  ||||||||||    
T  5357784 ataagtgtgtaatgagcaaatggttca 5357758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 41184730 - 41184812
Alignment:
Q  199 agaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||||||||||| ||||||||  |||||||||| |||||||| | ||||||||||||| |||| | |||||| ||||||||    
T  41184730 agaatgcaccaatacttaacaagtgcacttaaaactatttttctttctccttcatttatacatttttcttaatacgtgtgaaa 41184812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 13135794 - 13135905
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||||||||||||||||        |||| | ||||||||||||  ||||||| ||||||||||||| | || | |||    
T  13135794 tatattccactttgcatttatgatagtggagaatgcacc--------acaaaaacacttaaaacca--tttctctctccttcatttatacagttttctta 13135883  T
Q  270 atatgtgtgaaaagaaaaaatg 291  Q
    ||| |||||||| ||| |||||    
T  13135884 atacgtgtgaaatgaacaaatg 13135905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 6735424 - 6735377
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaa 217  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  6735424 tatattccactttgcatttatgatagtggagaatgcacaaatacttaa 6735377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 7311247 - 7311173
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| ||||||||||||||||| |||  ||||||| |||| || | |||| |||||||||||||||||||||    
T  7311247 tatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctct 7311173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 4475291 - 4475393
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatat 273  Q
    ||||||||||||||||||||| ||| ||||||||||||| || |||||  ||||   ||| ||||||||||||| |||| ||||| | || | |||||||    
T  4475291 ttccactttgcatttatgataatggtgaatgcaccaatacttgacaaggacact--caacaatttttctctttctttcacttatacacttttcttaatat 4475388  T
Q  274 gtgtg 278  Q
    |||||    
T  4475389 gtgtg 4475393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 15898232 - 15898320
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||| |||||||||||||||||  | |||||||| |||||||||| |||  ||||||||  ||||||||||| || |||| |||||    
T  15898232 tatattctactttgcatttatgataaagaagaatgcatcaatagttaataaggacacttaaactcatttttctctctctttcacttata 15898320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 16926180 - 16926085
Alignment:
Q  145 actttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    ||||||||||||||||||| ||||   ||||| ||||| |||||||||||  | |||||||||||||| ||||| |   |||| |||||||||||||||    
T  16926180 actttcacaacttccaattcaata---tattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctc 16926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 20189933 - 20190021
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca-tttttctctttccttcatttat 257  Q
    ||||||||||||| ||||||||||| ||||||||||| || || |||||||   |||||||||| | ||||| ||| ||||||||||||    
T  20189933 tatattccactttacatttatgataatggagaatgcatcagtacttaacaaatgcacttaaaactattttttatctctccttcatttat 20190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 30437804 - 30437680
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaat 271  Q
    ||||| ||||| |||||||||||  | | |||| ||||||| ||||||| | |||| ||||| |||||||| | | |||| || |||||||| | |||||    
T  30437804 tattctactttacatttatgataaagaataatggaccaataattaacaaaaacactcaaaactatttttctgtcttcttcgttaatatatttttcttaat 30437705  T
Q  272 atgtgtgaaaagaaaaaatggttca 296  Q
    | |||||||| ||| ||||||||||    
T  30437704 aagtgtgaaatgaataaatggttca 30437680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 38978918 - 38979017
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||| ||||||||  ||||||||||   ||||| |||||||||||||||||  |  ||||| |||||||||||| |||  |||| |||||||||||    
T  38978918 atactactatcacaactctcaatttaata---tattctactttgcatttatgataaagaggaatgtaccaatagttaataagggcactcaaaaccatttt 38979014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 4412436 - 4412515
Alignment:
Q  184 catttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    ||||||| ||||| ||||||||| ||||| ||||||||   |||||| | ||||||||||| ||||||||||||| ||||    
T  4412436 catttataatagtagagaatgcatcaatacttaacaagtagacttaatatcatttttctctctccttcatttatacattt 4412515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 35988675 - 35988801
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| |||||||||||||||||     ||||||||||||| || |||| | |||||||||| |||||||||| |  |||| ||||| |||| || ||    
T  35988675 tatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaaca-cacttaaaactatttttctctctgtttcacttataaattttttctt 35988773  T
Q  269 aatatgtgtgaaaagaaaaaatggttca 296  Q
    ||||| ||||||| ||||||| ||||||    
T  35988774 aatatatgtgaaatgaaaaaaaggttca 35988801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 15814603 - 15814649
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||   |||||||||||||||||||||||||||    
T  15814603 tgtctcaaaataactgagtcatttcacttttcaatacaatattaatt 15814649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 41594904 - 41594803
Alignment:
Q  179 ctttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtg 278  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| | || ||||||  |||||||||| || |||| |||||||||| | ||||||||| ||    
T  41594904 ctttgcatttatgataatggtgaatg-accaatacttgacaaaaacatttaaaattatttttctctctcattcacttatatatttttcttaatatgtatg 41594806  T
Q  279 aaa 281  Q
    |||    
T  41594805 aaa 41594803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 13422414 - 13422314
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||||| |||||||||| ||||||||| ||||  |||| | | |||||||| |||||||||| | ||||||||  ||| |||| | |||||||||||||    
T  13422414 tttgcatgtatgatagtgaagaatgcacaaatacataacgaaagcacttaaa-ccatttttctttctccttcatcaatacatttttcttaatatgtgtga 13422316  T
Q  280 aa 281  Q
    ||    
T  13422315 aa 13422314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 289
Target Start/End: Complemental strand, 6629483 - 6629343
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    ||||||||  ||| ||||||||||| ||| ||||||||||||||||| |||    |||||||||||||| || |||||| |||| ||||| |||||   |    
T  6629483 tactttcatcactcccaatttaata-tat-ttccactttgcatttataataaaaaagaatgcaccaatacttgacaaga-cactcaaaactatttt---c 6629390  T
Q  244 tttccttcatttatatatttatt-ttaatatgtgtgaaaagaaaaaa 289  Q
    | || |||||||||| | || || |||||||||||||||||||||||    
T  6629389 tctctttcatttatacactttttcttaatatgtgtgaaaagaaaaaa 6629343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 25814310 - 25814350
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  25814310 aaaataactgaatcatttcacttttcaatacaatattaatt 25814350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 39060582 - 39060534
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttc-aatacaatattaatt 128  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  39060582 gtgtttcaaaataactgagctatttcacttttcaaatacaatattaatt 39060534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 8369866 - 8369819
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||| | |||||| ||||||||||||||||||||    
T  8369866 gtgtcccaaaataactgagccatttcatttttcaatacaatattaatt 8369819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 42575807 - 42575760
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| ||||||||| || | |||||||||||||||||||||||||||    
T  42575807 gtgtcccaaaataaccgagccatttcacttttcaatacaatattaatt 42575760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 3725133 - 3725175
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatttt 130  Q
    |||||||||||   |||||||||||||||||||||||||||||    
T  3725133 aaaataactgagtcatttcacttttcaatacaatattaatttt 3725175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 4044644 - 4044598
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||| |||||||| ||||  |||||||||||||||||||||||||||    
T  4044644 tgtcccaaaataattgaatcatttcacttttcaatacaatattaatt 4044598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 25108587 - 25108688
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||| ||||   ||||  ||||| |||||||||||  | |||||||| ||||| |||||||   |||| ||||| |||||    
T  25108587 atactactttcaccacttccaattcaata---tattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttt 25108683  T
Q  240 tctct 244  Q
    |||||    
T  25108684 tctct 25108688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 25111242 - 25111141
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||| ||||   ||||| ||||| |||||||||||  | |||||||| ||||| || ||||   |||| ||||| |||||    
T  25111242 atactactttcaccacttccaattcaata---tattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttt 25111146  T
Q  240 tctct 244  Q
    |||||    
T  25111145 tctct 25111141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 25167679 - 25167780
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||| ||||   ||||  ||||| |||||||||||  | |||||||| ||||| |||||||   |||| ||||| |||||    
T  25167679 atactactttcaccacttccaattcaata---tattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttt 25167775  T
Q  240 tctct 244  Q
    |||||    
T  25167776 tctct 25167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 25170333 - 25170232
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||| ||||   ||||| ||||| |||||||||||  | |||||||| ||||| || ||||   |||| ||||| |||||    
T  25170333 atactactttcaccacttccaattcaata---tattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttt 25170237  T
Q  240 tctct 244  Q
    |||||    
T  25170236 tctct 25170232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 31090345 - 31090419
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| ||||||| |||||||||  | ||||||||||||||||| | |||  |||| |||| |||||||||||    
T  31090345 tatattctactttgcgtttatgataaagaagaatgcaccaatagttgataagggcactcaaaatcatttttctct 31090419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 35666926 - 35667000
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||| |||||| ||| |||  |||||||||||| |||| || | |||||||||| ||||||||||    
T  35666926 tatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactatttttctct 35667000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 7613652 - 7613693
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||| ||| ||||||||||| |||||||||||||||    
T  7613652 caaaataactaaaccatttcactttttaatacaatattaatt 7613693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 4194975 - 4195047
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||| ||||| |||||||||||  | |||||||| |||||||| | |||  |||| ||||||||||||||||    
T  4194975 tattctacttttcatttatgataaagaagaatgcatcaatagttcataagggcactcaaaaccatttttctct 4195047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 7276329 - 7276369
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||  ||||| ||||||||||||||||||||||    
T  7276329 aaaataactgagttattttacttttcaatacaatattaatt 7276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 13422513 - 13422473
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  13422513 aaaataactgattcatttcacttttcaatacaatattaatt 13422473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 28057866 - 28057786
Alignment:
Q  201 aatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||| ||||| ||||||||  || ||||||  |||||||||| ||||||||||||| |||| | ||| || ||||||||    
T  28057866 aatgcatcaatacttaacaagtacatttaaaattatttttctctctccttcatttatacatttttcttagtacgtgtgaaa 28057786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 42818944 - 42819016
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttct 242  Q
    ||||||| ||||| |||||||||||  | |||||||||||||  |||| |||  |||| ||||||||||||||    
T  42818944 tatattctactttacatttatgataaagaagaatgcaccaatgattaataagggcactcaaaaccatttttct 42819016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 43639609 - 43639449
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||   |||| ||||||||||||||||||||||| |||||| ||||| ||||||| | ||||||||||||||||    
T  43639609 atactactttcacaacttccaattcaata---tatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttt 43639513  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  43639512 tctctctccttcatttatatatttgtcttaatatgtgtgaaaagaaaaaatggttcagataatt 43639449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 54122317 - 54122157
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||   |||| |||||||||||||||||||||||||||||||||||| ||||||| | || ||||||| |||||    
T  54122317 atactactttcacaacttccaattcaata---tatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttt 54122221  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||| ||||||||||||| |||| | ||||||||||||||| |||||||||| ||||||||||    
T  54122220 tctctctccttcatttatacatttgtcttaatatgtgtgaaatgaaaaaatggctcagctaatt 54122157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 21296596 - 21296436
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||   ||||| |||||||||||||||||||| | |||||||||||| ||||||||| || |||||| ||||||    
T  21296596 atactactttcacaacttccaattcaata---tattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcatttt 21296500  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
     |||| ||||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||    
T  21296499 cctctctccttcatttatacatttgtcttagtatgtgtgaaaagaaaaaatggttcagctaatt 21296436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 39866617 - 39866508
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaat 271  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||||||||||||| |||| | |||||    
T  39866617 tatttcactttgcatttatgatagtggagaatacaccaatacttaacaaaatcacttaaaactatttttctctttccttcatttatacatttttcttaat 39866518  T
Q  272 atgtgtgaaa 281  Q
    ||||||||||    
T  39866517 atgtgtgaaa 39866508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 9017842 - 9017953
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||| | |||||||||| |||||||||| || |||||||||| |||| |||||    
T  9017842 tatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatttatacatttttttta 9017941  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  9017942 atatgtgtgaaa 9017953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 2868617 - 2868726
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaat 271  Q
    ||||||||||||||||||||| ||||||||||||| |||||  |||||| |  |||||||||||||||||||| ||||||||||||| |||| | |||||    
T  2868617 tattccactttgcatttatgacagtggagaatgcagcaatacataacaaaagaacttaaaaccatttttctctctccttcatttatacatttttcttaat 2868716  T
Q  272 atgtgtgaaa 281  Q
    ||||||||||    
T  2868717 atgtgtgaaa 2868726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 26134769 - 26134660
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||||||||||||||||||||||||  || |||| ||||||||| |||||||||| |||||||||| ||||||||||||| |||| | |||    
T  26134769 tatatttcactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaacaatttttctctctccttcatttatacatttgtctta 26134670  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  26134669 atatgtgtga 26134660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 10855035 - 10855146
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||| |||||| ||||||||||||  ||| || | |||||||||| |||||||||| ||||||||||||| |||||| |||    
T  10855035 tatattccactttgcatttatgagagtggataatgcaccaatacataataaaaacacttaaaactatttttctctctccttcatttatacatttatctta 10855134  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  10855135 atacgtgtgaaa 10855146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 17777060 - 17776949
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||| || | ||| ||||||||||||||||| || |||||||||| |||| |||||    
T  17777060 tatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccatttttctctctcattcatttatacatttttttta 17776961  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  17776960 atacgtgtgaaa 17776949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 19078361 - 19078250
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||| || | ||| ||||||||||||||||| || |||||||||| |||| |||||    
T  19078361 tatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccatttttctctctcattcatttatacatttttttta 19078262  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  19078261 atacgtgtgaaa 19078250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 33994698 - 33994809
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||  |||||||||| ||||||||||||| |||| | ||     
T  33994698 tatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaattatttttctctctccttcatttatacatttttcttg 33994797  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  33994798 atacgtgtgaaa 33994809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 275
Target Start/End: Original strand, 5245453 - 5245558
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||| |||||||||| |||||||| |||||||| ||||||||| |||||||||| |||||||||| |||||||| |||| |||| | |||    
T  5245453 tatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactatttttctctctccttcatgtatacatttgtctta 5245552  T
Q  270 atatgt 275  Q
    ||||||    
T  5245553 atatgt 5245558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 11251183 - 11251082
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| ||| || |||||||||| |||| | ||||||| |||||    
T  11251183 tttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttttctctcattcatttatacatttttcttaatatatgtga 11251084  T
Q  280 aa 281  Q
    ||    
T  11251083 aa 11251082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 32827370 - 32827259
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| |||||||||||||||||||||||||||||  |||||||  |||||||||| |||||| ||| ||||||||||||| |||| | |||    
T  32827370 tatatttcactttacatttatgatagtggagaatgcaccaatacgtaacaagtgcacttaaaactatttttttctctccttcatttatacatttttctta 32827271  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  32827270 atacgtgtgaaa 32827259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 15280646 - 15280754
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| |||||||||||||||||||| ||| | |||| ||||||  ||||||||| ||||||| ||| ||||||||||||| |||||| |||    
T  15280646 tatattccactttccatttatgatagtggagaatacacga-tagtgaacaagtgcacttaaaatcatttttatctctccttcatttatacatttatctta 15280744  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  15280745 atatgtgtga 15280754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 36097721 - 36097633
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||||||||||||||| | | ||||||||||||||| ||| |||||||||  |||||||||||||||||||| |||||||||||||    
T  36097721 tatattccactttgcatttctaacagtggagaatgcaccgatacttaacaagagtacttaaaaccatttttctctctccttcatttata 36097633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 14756180 - 14756073
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||||||||||||||||||||||||| |||| || ||||||||| |||||||||  |||||||||| ||||| | ||||| |||| | |||    
T  14756180 tatattctactttgcatttatgatagtggagaatgtaccagtacttaacaagagcacttaaaattatttttctctctcctttaattatacatttttctta 14756081  T
Q  270 atatgtgt 277  Q
    ||||||||    
T  14756080 atatgtgt 14756073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 1772165 - 1772079
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    |||||||| ||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||| ||||    
T  1772165 cactttgcttttatgatagtggagaatataccaatacttaacaagaacacttaaaaccatttttctctctcctttatttatacattt 1772079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 292
Target Start/End: Original strand, 26142950 - 26143064
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcac--ttaaaaccatttttctctttccttcatttatatatttattttaatatgtgt 277  Q
    ||||||||||||||||||||||||||||||||| |||| ||||  ||   |||||||| |||||||| ||||| ||||||| |||| | |||||||||||    
T  26142950 tttgcatttatgatagtggagaatgcaccaatacttaaaaagagaacctataaaaccaattttctctctcctttatttatacatttgtcttaatatgtgt 26143049  T
Q  278 gaaaagaaaaaatgg 292  Q
    |||| || |||||||    
T  26143050 gaaatgagaaaatgg 26143064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 54845582 - 54845477
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||| | ||||||||| | ||  ||||||| | |||||||||| |||||||||| ||||||||||||| || | | |||    
T  54845582 tatattccactttgcatttatgatactagagaatgcatcgatccttaacaaaaacacttaaaactatttttctctctccttcatttatacatatttctta 54845483  T
Q  270 atatgt 275  Q
    ||||||    
T  54845482 atatgt 54845477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 32023167 - 32023059
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaac-catttttctctttccttcatttatatatttatttt 268  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |  |||||||||  |||||||| | ||||||||||||| ||||   ||    
T  32023167 tatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaacttatttttctatctccttcatttatacattttcctt 32023068  T
Q  269 aatatgtgt 277  Q
    |||||||||    
T  32023067 aatatgtgt 32023059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 54458375 - 54458303
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttct 242  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  54458375 tatattccactttacatttatgataatggagaatgcacccatacttaacaaaatcacttaaaatcatttttct 54458303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 45392131 - 45392237
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| |||||| |||||| || ||||||||||||||||||||  ||||||||||| |||| ||| | ||||| |||||||||||| |||||    
T  45392131 tatatttcactttacatttacgatagtagataatgcaccaatagttaacaaattcacttaaaactatttctctttctcctttatttatatattt-tttta 45392229  T
Q  270 atatgtgt 277  Q
    ||| ||||    
T  45392230 atacgtgt 45392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 52325218 - 52325325
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||| | ||||||||||||||  |||||| | |||| |||||| ||||||| | ||||| ||||||| |||| | |||    
T  52325218 tatattccactttgcatttatgatagcgtagaatgcaccaatacataacaataacactaaaaaccctttttctatctcctttatttatacatttttctta 52325317  T
Q  270 atatgtgt 277  Q
    ||| ||||    
T  52325318 atacgtgt 52325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 53876502 - 53876399
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| |||||||||||||||| ||||||| |||| ||||||| | ||||||||| ||||||| ||  ||||||||||||| |||| | |||    
T  53876502 tatatttcactttacatttatgatagtggaaaatgcacaaatatttaacaaaagcacttaaaatcatttttttcactccttcatttatacatttttctta 53876403  T
Q  270 atat 273  Q
    ||||    
T  53876402 atat 53876399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 39365071 - 39364970
Alignment:
Q  203 tgcaccaatagttaacaagatcacttaaaacca-tttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaa 301  Q
    |||||||||| ||||||||| |||||||||||| ||||||||| ||||| ||||||| |||| | ||||||||||||||| ||  || ||| ||||||||    
T  39365071 tgcaccaatacttaacaagagcacttaaaaccactttttctctctcctttatttatacatttttcttaatatgtgtgaaatgagcaagtggctcagctaa 39364972  T
Q  302 tt 303  Q
    ||    
T  39364971 tt 39364970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 54493922 - 54494034
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||  | |||||||||||||   |||| |||||| |||||||||||||||||||| | |||||| ||||||||  |||||||||| || ||    
T  54493922 atactactttcatcatttccaatttaata---tatttcactttacatttatgatagtggagaatacgccaatacttaacaagtgcacttaaaactatatt 54494018  T
Q  240 tctctttccttcattt 255  Q
    ||||| | ||||||||    
T  54494019 tctctcttcttcattt 54494034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 9218186 - 9218305
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| |||||||||||||||||    |||||||||||||| ||||| ||| |||| ||||| |||||||||| || |||| ||||| | || || ||    
T  9218186 tatattctactttgcatttatgataagaaagaatgcaccaatacttaacgaga-cactcaaaactatttttctctctctttcacttatacactttttctt 9218284  T
Q  269 aatatgtgtgaaaagaaaaaa 289  Q
    |||||||||||||||||||||    
T  9218285 aatatgtgtgaaaagaaaaaa 9218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 54783004 - 54783112
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| |||||||||||| | | |||||||||||| |||| |||  |||||||||| |||||||||| || |||||||||| |||| | |||    
T  54783004 tatatttcactttacatttatgatagcgcataatgcaccaatacttaagaagtgcacttaaaactatttttctctctcattcatttatacatttttctta 54783103  T
Q  270 atatgtgtg 278  Q
    ||| |||||    
T  54783104 atacgtgtg 54783112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 49408589 - 49408676
Alignment:
Q  209 aatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttca 296  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||||| |||  | ||||||||| ||||| ||  ||||||||||    
T  49408589 aatacttaacaagaacacttaaaactatttttctctttccttcatttataaattattcttaatatgtatgaaatgagcaaatggttca 49408676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 55415498 - 55415404
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaata 272  Q
    ||||||| ||||||||||||  |||||||||||||| ||||||| | || |||||||||||||||||| || || ||||||| |||| ||||||||    
T  55415498 cactttgtatttatgatagtaaagaatgcaccaatacttaacaaaaacagttaaaaccatttttctctctcatttatttatacattt-ttttaata 55415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 41031633 - 41031727
Alignment:
Q  187 ttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||||||||||| |||||||||||| ||||||||  |||||||||| |||||||| | | |||| || ||| |||| |||||||| ||||||||    
T  41031633 ttatgatagtggaaaatgcaccaatacttaacaagtgcacttaaaactatttttctttcttcttctttcatacattttttttaatacgtgtgaaa 41031727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 46786047 - 46785934
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaat--agttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattt 267  Q
    |||||| |||||||||||||||||||||||||||  ||||||  | |||||||||||| ||||||| |||||| ||| ||||| | | ||| |||| | |    
T  46786047 tatatttcactttgcatttatgatagtggagaatataccaatacacttaacaagatcatttaaaactatttttttctctcctttactaatacatttttct 46785948  T
Q  268 taatatgtgtgaaa 281  Q
    |||||| |||||||    
T  46785947 taatatatgtgaaa 46785934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 268
Target Start/End: Original strand, 8706191 - 8706285
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttt 268  Q
    ||||||||||||||||||||||    || |||||||| ||||| ||||||||| ||||||||| ||||| ||||| | ||||||||||| |||| ||||    
T  8706191 tatattccactttgcatttatg----tgaagaatgcatcaatacttaacaagagcacttaaaatcatttctctctcttcttcatttatacatttttttt 8706285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 268
Target Start/End: Original strand, 9058078 - 9058172
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttt 268  Q
    ||||||||||||||||||||||    || |||||||| ||||| ||||||||| ||||||||| ||||| ||||| | ||||||||||| |||| ||||    
T  9058078 tatattccactttgcatttatg----tgaagaatgcatcaatacttaacaagagcacttaaaatcatttctctctcttcttcatttatacatttttttt 9058172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 22202368 - 22202312
Alignment:
Q  235 atttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatg 291  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||    
T  22202368 atttttctctttccttcatttatacatttatcttaatatgtgtgaaattaaaaaatg 22202312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 22202455 - 22202403
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaaga 222  Q
    ||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  22202455 tatattcaactttgcatttatgatagtggataatgcaccaatacttaacaaga 22202403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 39329816 - 39329697
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| |||||||||||||||||    |||||||||||||| ||||||||| || | ||||| |||| ||| | || |||| ||||| |||| || ||    
T  39329816 tatattctactttgcatttatgataagaaagaatgcaccaatacttaacaaga-cattcaaaactatttatctttctctttcacttatacattttttctt 39329718  T
Q  269 aatatgtgtgaaaagaaaaaa 289  Q
    |||||||||||||||||||||    
T  39329717 aatatgtgtgaaaagaaaaaa 39329697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 48744300 - 48744412
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctt-tccttcatttatatatttatttt 268  Q
    |||||| |||||| ||||||||||||||||||||||| ||||| |||||||   |||||||||| |||||| | || | ||||||||||| | || | ||    
T  48744300 tatatttcactttacatttatgatagtggagaatgcatcaatacttaacaaatgcacttaaaactattttttttttcttcttcatttatacacttttctt 48744399  T
Q  269 aatatgtgtgaaa 281  Q
    |||| ||||||||    
T  48744400 aatacgtgtgaaa 48744412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 26832085 - 26832183
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||  ||| |||||||||||   |||| ||||||||||||||| | |||||||||||| ||||| |||| |||| ||| |||||| |||||    
T  26832085 atactactttcatcactaccaatttaata---tatttcactttgcatttatggtggtggagaatgcatcaatacttaataagagcacgtaaaactatttt 26832181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 1772279 - 1772233
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  1772279 tgtctcaaaataactgaaccatttcatttttcaatacaatattaatt 1772233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 15082043 - 15082117
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    |||||| || ||||| ||||||||| ||||||||||||||||| ||||  ||| ||||||||||||| |||||||    
T  15082043 tatatttcattttgcttttatgataatggagaatgcaccaatatttaaagagagcacttaaaaccatatttctct 15082117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 11529101 - 11529031
Alignment:
Q  214 ttaacaagatcacttaaaaccattttt---ctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||||||| || ||||||||||||||   ||||||| ||||||||||||||| | |||||||||||||||    
T  11529101 ttaacaagagcatttaaaaccattttttttctctttctttcatttatatatttttcttaatatgtgtgaaa 11529031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 11529177 - 11529125
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaaga 222  Q
    ||||||||||||||||||||||||| ||||||||| | ||||| |||||||||    
T  11529177 tatattccactttgcatttatgatattggagaatgtatcaatacttaacaaga 11529125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 44219099 - 44218989
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatata-tttatttt 268  Q
    ||||||| |||||| |||||||||| ||| ||||||||||| | || |||||| |||| ||||||||||||||||||| || | ||||| | ||| | ||    
T  44219099 tatattctactttgtatttatgataatggggaatgcaccaacactt-acaaga-cactcaaaaccatttttctctttctttgacttatacactttttctt 44219002  T
Q  269 aatatgtgtgaaa 281  Q
    |||||||||||||    
T  44219001 aatatgtgtgaaa 44218989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 42547162 - 42547054
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-ttaatatgtgtg 278  Q
    |||||||||||||||    |||||||||||||| ||||||||| || | ||||| |||||| ||| || || | ||||| |||| || ||||||||||||    
T  42547162 tttgcatttatgataagaaagaatgcaccaatacttaacaaga-cattcaaaactatttttttctctcttttacttataaattttttcttaatatgtgtg 42547064  T
Q  279 aaaagaaaaa 288  Q
    ||||||||||    
T  42547063 aaaagaaaaa 42547054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 51636960 - 51636880
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttca 252  Q
    ||||||||||||| ||| |||||| |||  |||||||||||| ||  |||||  |||||||||||||||||||| |||||||    
T  51636960 atattccactttgaatt-atgataatggtaaatgcaccaatacttggcaagacaacttaaaaccatttttctctctccttca 51636880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 2868520 - 2868560
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  2868520 aaaataactgatccatttcacttttcaatacaatattaatt 2868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 27152907 - 27153023
Alignment:
Q  175 tccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatg 274  Q
    |||||||||||| | |||| ||||||||||||| |||| |||| || | || ||||||  |||||||| | | || ||||||||||||| | |||||||     
T  27152907 tccactttgcatatttgatggtggagaatgcacaaatatttaataaaagcatttaaaaatatttttctatcttctacatttatatatttttcttaatata 27153006  T
Q  275 tgtgaaaagaaaaaatg 291  Q
    ||| ||| ||| |||||    
T  27153007 tgtaaaatgaacaaatg 27153023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 12744855 - 12744898
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatag 213  Q
    |||| |||||||||||||| | ||||||||||||||||||||||    
T  12744855 tataatccactttgcatttctaatagtggagaatgcaccaatag 12744898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 12745048 - 12745114
Alignment:
Q  214 ttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||||||| ||||||||| ||||||| ||| ||||||||||| | |||| | |||||||||||||||    
T  12745048 ttaacaagagcacttaaaagcatttttatctctccttcattta-acatttttcttaatatgtgtgaaa 12745114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 21296671 - 21296624
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||| ||||||||||   |||||||||||||||||||||||||||    
T  21296671 gtgtctcgaaataactgagtcatttcacttttcaatacaatattaatt 21296624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 39365185 - 39365138
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||| | |||||| ||||||||||||||||||||    
T  39365185 gtgtcccaaaataactgagccatttcaattttcaatacaatattaatt 39365138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 46786149 - 46786102
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||| ||||||||||||| ||||||||||||| |||| ||||||||||    
T  46786149 gtgtttcaaaataactgagctatttcactttttaatataatattaatt 46786102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 1923104 - 1923204
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||| |||||||||||||||||  | |||||||||||| |||| | |||  |||   ||||||||||    
T  1923104 atactactttcaccactcccaattcaata---tattctactttgcatttatgataaagaagaatgcaccaacagttgataagggcac---aaaccatttt 1923197  T
Q  240 tctcttt 246  Q
    |||||||    
T  1923198 tctcttt 1923204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 50736196 - 50736250
Alignment:
Q  229 aaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaag 283  Q
    ||||| |||||||| |||| |||||||||| | || |||||||||||||||||||    
T  50736196 aaaactatttttctttttctttcatttatacaatttttttaatatgtgtgaaaag 50736250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 50776659 - 50776605
Alignment:
Q  229 aaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaag 283  Q
    ||||| |||||||| |||| |||||||||| | || |||||||||||||||||||    
T  50776659 aaaactatttttctttttctttcatttatacaatttttttaatatgtgtgaaaag 50776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 21585476 - 21585383
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    ||||||| | ||| |||||||||||  | |||||| ||||||| |||||||   |||| |||| ||||||||||| ||||||| | ||||||||    
T  21585476 tatattctattttacatttatgataaagaagaatgaaccaataattaacaaagacactcaaaatcatttttctctgtccttcactaatatattt 21585383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 36097824 - 36097775
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatttt 130  Q
    ||||| ||||||| |||| | ||||||||||||||| |||||||||||||    
T  36097824 gtgtcccaaaatatctgagccatttcacttttcaatgcaatattaatttt 36097775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 40614191 - 40614085
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaa 270  Q
    ||||| ||||||||||| |||||| |   ||||||||||||| ||||||||  |||| ||||  |||||    |||| |||| |||||||| | ||||||    
T  40614191 atatttcactttgcattcatgataattctgaatgcaccaatatttaacaaggacactcaaaattatttt----tttctttcacttatatatattttttaa 40614096  T
Q  271 tatgtgtgaaa 281  Q
    |||||||||||    
T  40614095 tatgtgtgaaa 40614085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 43640727 - 43640686
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||   |||||||||||||||||||||||||||    
T  43640727 caaaataactgagtcatttcacttttcaatacaatattaatt 43640686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 53754130 - 53754029
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||  | |||||||||||||| ||| |||   |||| |||| ||||||||||| |  |||||||||| | || |||||    
T  53754130 tatattctactttacatttatgataaagaagaatgcaccaatacttaccaaagacactcaaaatcatttttctctctatttcatttatacacttttttta 53754031  T
Q  270 at 271  Q
    ||    
T  53754030 at 53754029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 17274750 - 17274830
Alignment:
Q  198 gagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtg 278  Q
    ||||||||| ||||| ||||  ||  || ||||||| |||||||||  ||||||||||||| |||| | ||||||||||||    
T  17274750 gagaatgcatcaatatttaatcagtgcatttaaaactatttttctccctccttcatttatacatttttcttaatatgtgtg 17274830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 39144684 - 39144736
Alignment:
Q  168 agtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaa 220  Q
    ||||||||| ||||| ||| |||||||  |||||||||||||||| |||||||    
T  39144684 agtatattctactttacatctatgataaaggagaatgcaccaatacttaacaa 39144736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 48409598 - 48409740
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| || |   ||||| ||||| |||||||||||  | ||||| |||||||| || ||||   |||| ||||| || ||    
T  48409598 atactactttcaccactcccaattcaaca---tattctactttacatttatgataaagaagaatccaccaatacttgacaaagacactcaaaacaatctt 48409694  T
Q  240 tctctttcc--ttcatttatatatttattttaatatgtgtgaaaag 283  Q
    ||||| ||   |||||||||| |||| | |||||||||||||||||    
T  48409695 tctctctctctttcatttatacatttttcttaatatgtgtgaaaag 48409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 7425971 - 7425810
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaa-caagatcacttaaaaccattt 238  Q
    |||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  7425971 atactactttcacaacttccaattcaata---tattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccattt 7425875  T
Q  239 ttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    |||||| || |||||||||| |||| | |||||| |||||||| |||||||||| ||||||||||    
T  7425874 ttctctctcattcatttatacatttgtcttaatacgtgtgaaatgaaaaaatggctcagctaatt 7425810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 38181967 - 38181809
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||   ||||| | |||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||    
T  38181967 atactactttcacaacttccaattcaata---tattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacacttaaaaccatttt 38181871  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaa 301  Q
    ||||| || ||||||||||||||  | |||| ||||||||||||||||||||| ||||||||    
T  38181870 tctctctctttcatttatatattagtcttaacatgtgtgaaaagaaaaaatggctcagctaa 38181809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 140 - 302
Target Start/End: Original strand, 11616575 - 11616734
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||| |||||||| ||| |||||| |||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  11616575 atacaactttcaccactcccaattcaat--tatattccactttgcatatatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccatttt 11616672  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaat 302  Q
    ||||| ||||||||||||| |||| ||||||||||||||||| ||  |||||| |||| ||||    
T  11616673 tctctctccttcatttatacattt-ttttaatatgtgtgaaatgagcaaatggctcagttaat 11616734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 5083518 - 5083405
Alignment:
Q  190 tgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaa 289  Q
    ||||| ||||| ||||||||||| ||||||||| |||||||||| |||||| ||||||||| ||||||| |||| ||||||||| |||||||||||||||    
T  5083518 tgataatggagtatgcaccaatacttaacaagagcacttaaaactatttttatctttcctttatttatacatttgttttaatatatgtgaaaagaaaaaa 5083419  T
Q  290 tggttcagctaatt 303  Q
    ||||||||||||||    
T  5083418 tggttcagctaatt 5083405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 37490684 - 37490563
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||| ||||||||||| ||||||||||||| |||| | |||    
T  37490684 tatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatttatacatttttctta 37490585  T
Q  270 atatgtgtgaaaagaaaaaatg 291  Q
    | |||||||||| ||| |||||    
T  37490584 acatgtgtgaaatgaataaatg 37490563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 40038204 - 40038066
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||  ||||| ||||||||||||||||  |||||| ||||||||||||| ||||| ||| |||| |||||||||||| ||||||  |||||    
T  40038204 atactactttcatcacttcaaatttaatagtatattttactttgtatttatgatagtgaagaatacac-aatacttaacaagatcatttaaaattatttt 40038106  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||||||||||||||||| |||||| ||||||| |||||    
T  40038105 tctctttccttcatttatacatttatcttaatatatgtga 40038066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 23058860 - 23058970
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||| || ||||||||||||||| | |||    
T  23058860 tatatttcactttgcatttatgatagtggagaatgcaccaata-ctaacaagaacacttaaaactatttttctctctctttcatttatatatttttctta 23058958  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  23058959 atacgtgtgaaa 23058970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 47454045 - 47454156
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||| | |||    
T  47454045 tatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattttactctctccttcatttatatatttttctta 47454144  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  47454145 atacgtgtgaaa 47454156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 29257588 - 29257697
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||||||||||||||| ||| | ||||||||||| |||| | |||    
T  29257588 tatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatttatacatttgtctta 29257687  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  29257688 atatgtgtga 29257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 44604543 - 44604435
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||| ||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||| |||| | |||    
T  44604543 tatattccactttgc-tttatgatagtggagaataaaccaatacttaacaagaacacttaaaatcatttttctctctccttcatttatacatttgtctta 44604445  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  44604444 atatgtgtga 44604435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 2846742 - 2846637
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||| |||||||||||||||||||  ||||||| ||||||||| |||||||||| |||||||||| || |||||||||| |||| | |||    
T  2846742 tatattccactttgaatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactatttttctctctcgttcatttatacatttgtctta 2846643  T
Q  270 atatgt 275  Q
    ||||||    
T  2846642 atatgt 2846637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 33584604 - 33584692
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||| | ||||||||||||||||||||| |||||||||||||    
T  33584604 tatattccattttgcatttatgatactggagaatacaccaatacttaacaatagcacttaaaaccatttttctctctccttcatttata 33584692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 5724773 - 5724663
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| |||||||||||||||||||||||| |||| ||||||||  |||||||||| |||||||||| ||||||||||||| |||| | |||    
T  5724773 tatatttcactttacatttatgatagtggagaatgcactaatacttaacaag-gcacttaaaactatttttctctctccttcatttatacatttttctta 5724675  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  5724674 atacgtgtgaaa 5724663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 2842118 - 2842025
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    |||||| |||||||||||||||||||||||||||||| ||||| || |||| | ||||||| ||||||||||||| ||||||||||||| ||||    
T  2842118 tatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaataacacttaacaccatttttctctctccttcatttatacattt 2842025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 18235231 - 18235323
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatt 262  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  || ||||||  |||||| ||| |||||||||||||||||    
T  18235231 tatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcatttaaaattatttttttctctccttcatttatatatt 18235323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 27234554 - 27234664
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||||||||||||||||||||||||| ||||| ||||||| | ||||||||| || |||||||| || |||||||||| |||| | |||||||||||||    
T  27234554 tttgcatttatgatagtggagaatgcatcaatacttaacaaaaacacttaaaa-caattttctctgtcattcatttatacatttttcttaatatgtgtga 27234652  T
Q  280 aaagaaaaaatg 291  Q
    || ||| |||||    
T  27234653 aatgaacaaatg 27234664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 29434646 - 29434536
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||| |||||||||| | ||||||||| | | || | |||    
T  29434646 tatattccactttgcatttatgaaagtggagaatccaccaatacttaacaaaagcacttaaaactatttttctctct-cttcatttaaaaaattttctta 29434548  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  29434547 atatgtgtgaaa 29434536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 30463057 - 30463168
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||| ||| |||||||||| |||||||||||||||||| ||||||||  |||||||||| |||||||||| || |||||||||| |||| | |||    
T  30463057 tatattccattttacatttatgattgtggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctctcattcatttatacatttttctta 30463156  T
Q  270 atatgtgtgaaa 281  Q
    ||| | ||||||    
T  30463157 atacgcgtgaaa 30463168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 36117702 - 36117805
Alignment:
Q  170 tatattccactttgcatttatga-tagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttt 268  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||  |||||||||| |||||||||||||||| ||||||| |||| | ||    
T  36117702 tatattccactttacatttatgaatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttttctctttcctttatttatacatttttctt 36117801  T
Q  269 aata 272  Q
    ||||    
T  36117802 aata 36117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 33774136 - 33774022
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||| ||||| |   |||||||||||||||||| |||||||||||||||| || ||||| ||||||||| |||| ||||| |||||    
T  33774136 atactactttcacaacttacaattca---gtatattccactttgcatctatgatagtggagaatacatcaatacttaacaaga-cactcaaaactatttt 33774041  T
Q  240 tctctttccttcatttata 258  Q
    ||||| || |||| |||||    
T  33774040 tctctctctttcacttata 33774022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 46095486 - 46095376
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||||||||||||||||| |||||||||| |||| ||||||||| |||| |||||||||||| | | ||||| ||||||| |||| | |||    
T  46095486 tatatttcactttgcatttatgatagtagagaatgcacaaatatttaacaagagcactcaaaaccattttt-tttctcctttatttatacatttttctta 46095388  T
Q  270 atatgtgtgaaa 281  Q
    |||||| |||||    
T  46095387 atatgtatgaaa 46095376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 49100568 - 49100458
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||||||||||||||  ||||||| ||||||||  ||||| |||| |||||||||| || |||||||||| |||| | |||    
T  49100568 tatattccactttacatttatgatagtggagaataaaccaatacttaacaagtgcactt-aaactatttttctctgtctttcatttatacatttttctta 49100470  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  49100469 atacgtgtgaaa 49100458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 32775997 - 32776136
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||| ||||| |||||||||||  | |||||||||||||| |||||||   |||| |||||||||||    
T  32775997 atactactttcaccactcccaattcaata---tattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttt 32776093  T
Q  240 tctctttccttcatttatata-tttattttaatatgtgtgaaa 281  Q
    ||||| ||||||| ||||| | ||| | |||||||||||||||    
T  32776094 tctctctccttcacttatacactttttcttaatatgtgtgaaa 32776136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 34064256 - 34064375
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatata-tttatttt 268  Q
    ||||||| ||||| |||||||||||    |||||||||||||| ||||||||| |||| ||||| |||||||||| |  |||||||||| | ||| ||||    
T  34064256 tatattctactttacatttatgataagaaagaatgcaccaatacttaacaaga-cactcaaaactatttttctctctatttcatttatacactttttttt 34064354  T
Q  269 aatatgtgtgaaaagaaaaaa 289  Q
    |||||||||||||||||||||    
T  34064355 aatatgtgtgaaaagaaaaaa 34064375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 17266068 - 17266179
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| ||||||||||||||||||||| |||||||||||||| |||| || | ||||| ||||||||||||||| | ||||  ||| | |||| | |||    
T  17266068 tatatttcactttgcatttatgatagtgaagaatgcaccaatacttaataaaaacactttaaaccatttttctctcttcttcgcttacacatttttctta 17266167  T
Q  270 atatgtgtgaaa 281  Q
    |||||| |||||    
T  17266168 atatgtttgaaa 17266179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 48981697 - 48981808
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| |||||||||||||||| |||  |||||||  |||||||  || ||||||| |||||||| | | ||||||||||| |||||| |||    
T  48981697 tatattccactttacatttatgatagtggataatataccaatacataacaagtgcatttaaaactatttttctttcttcttcatttatacatttatctta 48981796  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  48981797 atacgtgtgaaa 48981808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 23703957 - 23704043
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcattta 256  Q
    |||||| || ||| ||||||||||||||||||||||| ||||| ||||||||  | |||||||| |||||||||| |||||||||||    
T  23703957 tatatttcattttacatttatgatagtggagaatgcagcaataattaacaagtgcgcttaaaactatttttctctctccttcattta 23704043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 34963877 - 34963763
Alignment:
Q  170 tatattccactttgcatttatgatagtg---gagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt 266  Q
    |||||| |||||| ||||||||||||||   ||||||||||||||| |||||||| ||||||||||| |||||||||  ||  ||||||||| |||| |     
T  34963877 tatatttcactttacatttatgatagtgaaagagaatgcaccaatatttaacaagttcacttaaaactatttttctccctctatcatttatacatttttc 34963778  T
Q  267 ttaatatgtgtgaaa 281  Q
    |||||| || |||||    
T  34963777 ttaatacgtatgaaa 34963763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 21387546 - 21387495
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaag 221  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  21387546 tatattccactttacatttatgatagtggagaatgcaccaatacttaacaag 21387495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 34001925 - 34001816
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||| |||| |   || ||||| ||||||||| |||||||||||| ||||||||||| || |||| ||||||| | |||    
T  34001925 tatattccactttgcatttatgataatggataccacatcaatacttaacaagagcacttaaaacca-ttttctctttcatttatttgtatattt-tctta 34001828  T
Q  270 atatgtgtgaaa 281  Q
    |||||| |||||    
T  34001827 atatgtctgaaa 34001816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 1643431 - 1643330
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||| |||||| ||||||||||   ||||||||||||||||||||||  || |||||||||||||| |||| || | ||||| |||  |||||    
T  1643431 atactactttcccaactttcaatttaata---tattccactttgcatttatgattatgaagaatgcaccaatacttaataaaagcactttaaattatttt 1643335  T
Q  240 tctct 244  Q
    |||||    
T  1643334 tctct 1643330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 31581509 - 31581423
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcattta 256  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||| |||||||    ||||||||| |||||| ||| |||||||||||    
T  31581509 tatattccattttacatttatgatattggagaatgcaccaatacttaacaaatgtacttaaaactatttttatctctccttcattta 31581423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 8150000 - 8150111
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| ||||||  ||||||||| |||| ||||||| |||| || |||| | ||||||||||||||||||||| || |||| ||||| |||| || ||    
T  8150000 tatattctactttgattttatgataatggaaaatgcacaaatatttgacaaaa-cacttaaaaccatttttctctctctttcacttatacattttttctt 8150098  T
Q  269 aatatgtgtgaaa 281  Q
    |||||||||||||    
T  8150099 aatatgtgtgaaa 8150111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 2849296 - 2849407
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||  | |||||||||||||| || ||||   |||  ||||| |||||||||| || |||||||||| |||| | |||    
T  2849296 tatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacacgcaaaactatttttctctctctttcatttatacatttttctta 2849395  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  2849396 atatgtgtgaaa 2849407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 23186209 - 23186113
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| |||||| ||||||||||||||||||||||||||||  ||||||        |||||  ||||||||| |||||||||||||||||| | |||    
T  23186209 tatattctactttgtatttatgatagtggagaatgcaccaataactaacaa-------caaaacagtttttctctctccttcatttatatatttttctta 23186117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 40803678 - 40803582
Alignment:
Q  184 catttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||||||||||||||||  |||||||| ||||||||  ||| |||||  |||||||||| ||||||||||||| |||| | |||||| ||| ||||    
T  40803678 catttatgatagtggagaaaacaccaatatttaacaagtacac-taaaattatttttctctctccttcatttataaatttttcttaatacgtgcgaaa 40803582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 32972084 - 32971972
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| ||||||||||||||| |    ||||||||||||||||| | |||  |||| |||||||||||||||| || |||| ||||| |||| || ||    
T  32972084 tatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcacttatacattttttctt 32971985  T
Q  269 aatatgtgtgaaa 281  Q
    |||| ||||||||    
T  32971984 aataagtgtgaaa 32971972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 37157117 - 37157157
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  37157117 aaaataactgagctatttcacttttcaatacaatattaatt 37157157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 45890888 - 45890804
Alignment:
Q  206 accaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaat 290  Q
    ||||||| ||||||| | || |||||||||||||||||| |||||| |||||| |||| | |||||| |||||||| ||| ||||    
T  45890888 accaatacttaacaaaagcatttaaaaccatttttctctctccttcttttatacatttttcttaatacgtgtgaaatgaacaaat 45890804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 7426047 - 7426000
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||    
T  7426047 gtgtcccaaaataactgagccatttcacttttcaatacaatattaatt 7426000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 11616500 - 11616547
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||    
T  11616500 gtgtcccaaaataactgagccatttcacttttcaatacaatattaatt 11616547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 28923291 - 28923232
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaac 233  Q
    ||||||||||||||||| ||| ||| ||||||||||||| || |||| ||||||||||||    
T  28923291 ttccactttgcatttataataatggtgaatgcaccaatacttgacaaaatcacttaaaac 28923232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 38589748 - 38589858
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||| ||||| |||||||||||  | ||||||||||||||||| | |||  || | |||||||||||    
T  38589748 atactactttcaccactcccaattcaata---tattctactttacatttatgataaagaagaatgcaccaatagttgataagggcattcaaaaccatttt 38589844  T
Q  240 tctctttccttcat 253  Q
    ||||| || |||||    
T  38589845 tctctctctttcat 38589858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 45218251 - 45218113
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||||||| |||||| ||||   ||||| ||||| |||||||||||  | |||||||||||||| || | ||   |||| ||||| |||||    
T  45218251 atactactttcacaactcccaattcaata---tattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttt 45218155  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||| || ||| |||||| | || | ||||| |||||||||    
T  45218154 tctctctctttcctttatacacttttcttaatttgtgtgaaa 45218113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 37264327 - 37264464
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||| |||||||||||||||||  |   |||||| ||||| || |||||  |||| |||||||||||    
T  37264327 atactactttcaccactcccaattcaata---tattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttt 37264423  T
Q  240 tctctttccttcatttatata-tttattttaatatgtgtgaaa 281  Q
    ||||  || |||| ||||||| ||| | |||||||||||||||    
T  37264424 tctc--tctttcacttatatactttttcttaatatgtgtgaaa 37264464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 9658887 - 9658990
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-ttaatatgtg 276  Q
    ||||| ||||||| |||  ||| ||||||||||||||| |||||| |||| |||||||||||||||| || |||  || || |||| || ||||||||||    
T  9658887 actttacatttatcataagggaaaatgcaccaatagttcacaaga-cactcaaaaccatttttctctctctttcgcttgtacattttttcttaatatgtg 9658985  T
Q  277 tgaaa 281  Q
    |||||    
T  9658986 tgaaa 9658990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 29997087 - 29997023
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttct 242  Q
    |||||||||||||||||  | |||||||||||||| ||||||||  || | ||||||||||||||    
T  29997087 actttgcatttatgataaagaagaatgcaccaataattaacaaggacattcaaaaccatttttct 29997023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 46288524 - 46288461
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgca 206  Q
    |||||||||||| ||||| ||||| ||||   |||||||||||||||| |||||||| |||||||||    
T  46288524 atactactttcataactttcaattcaata---tattccactttgcattaatgatagtcgagaatgca 46288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 47238266 - 47238346
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||||||  | ||||||||||||| ||| | |||  |||| |||||||||||||||| || |||| |||||    
T  47238266 actttgcatttatgataaagaagaatgcaccaattgttgataagggcactcaaaaccatttttctctctctttcacttata 47238346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 26938576 - 26938525
Alignment:
Q  252 atttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||||| |||| | ||||||||||||||| |||||||||||||| ||||||    
T  26938576 atttatacatttgtcttaatatgtgtgaaatgaaaaaatggttcaactaatt 26938525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 36070144 - 36070259
Alignment:
Q  168 agtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattt 267  Q
    ||||||||| ||||| | |||||||||  | | |||||||||||| || ||||   |||| ||||||||||| |||| || |||||||||| |||| | |    
T  36070144 agtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagacactcaaaaccattttcctctctctttcatttatacatttttct 36070243  T
Q  268 taatatgtgtgaaaag 283  Q
    |||| | |||||||||    
T  36070244 taatctatgtgaaaag 36070259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 43780141 - 43780216
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcattt 255  Q
    ||||||||||| ||| ||| ||||||||||||| | |||||||  |||||||||  ||||||| |||| |||||||    
T  43780141 tttgcatttataataatggtgaatgcaccaatattaaacaagagtacttaaaactctttttctatttctttcattt 43780216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 45891004 - 45890957
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||| | ||||||||||||||||||||| |||||    
T  45891004 gtgtcacaaaataactgagcaatttcacttttcaatacaataataatt 45890957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 48981318 - 48981365
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| ||||||||||||   |||||||||||||||||||||||||||    
T  48981318 gtgtcccaaaataactgagtcatttcacttttcaatacaatattaatt 48981365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 7456650 - 7456600
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaa 220  Q
    |||||||||||||  ||||||||||||||||||| || ||||| |||||||    
T  7456650 tatattccactttatatttatgatagtggagaatacatcaatacttaacaa 7456600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 12308319 - 12308365
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||    
T  12308319 tgtctcaaaataactgagtcatttcaattttcaatacaatattaatt 12308365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 19688008 - 19688082
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttca 252  Q
    ||||||||||||||||| |||  ||| || ||||| || |||||| ||||||||| ||||||||| | |||||||    
T  19688008 actttgcatttatgataatggtaaattcatcaatacttgacaagaacacttaaaaacatttttctatctccttca 19688082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 28923394 - 28923348
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||  ||||||| ||||||||||||||||||||    
T  28923394 tgtcttaaaataactgacttatttcatttttcaatacaatattaatt 28923348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 40590891 - 40590841
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaa 220  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||| |||||||    
T  40590891 tatattctactttgtatttatgatagcggaaaatgcaccaatacttaacaa 40590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 46288598 - 46288552
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||| |||||||||||| | |||||||||||||||| ||||||||||    
T  46288598 tgtcccaaaataactgagccatttcacttttcaatataatattaatt 46288552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 5724874 - 5724829
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaat 127  Q
    |||| |||||||| ||| | ||||||||||||||||||||||||||    
T  5724874 tgtcccaaaataagtgagccatttcacttttcaatacaatattaat 5724829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 33774203 - 33774162
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||   |||||||||||||||||||||||||||    
T  33774203 caaaataactgagtcatttcacttttcaatacaatattaatt 33774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 31581604 - 31581564
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  31581604 aaaataactgagtcatttcacttttcaatacaatattaatt 31581564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 37491067 - 37491027
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||  ||||| ||||||||||||||||||||||    
T  37491067 aaaataactgagttattttacttttcaatacaatattaatt 37491027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 39498620 - 39498660
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||| ||||||| ||||||||| |||||||||||    
T  39498620 aaaataactgacctatttctcttttcaatgcaatattaatt 39498660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 45480220 - 45480172
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatttt 130  Q
    |||||| |||||||||| |||||| | |||||||| |||||||||||||    
T  45480220 tgtctcgaaataactgatctattttatttttcaatgcaatattaatttt 45480172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 33191001 - 33190842
Alignment:
Q  141 tactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccattttt 240  Q
    ||||||||||||||||||||||| ||||   ||||||||| |||||||||||||||||||||||||  |||| ||||||||| ||||||||| |||||||    
T  33191001 tactactttcacaacttccaattcaata---tattccactatgcatttatgatagtggagaatgcattaatacttaacaagaacacttaaaatcattttt 33190905  T
Q  241 ctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    |||| | ||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||    
T  33190904 ctctcttcttcatttatacatttgtcttaatatgtgtgaaaagaaaaaatggctcagctaatt 33190842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 144 - 291
Target Start/End: Complemental strand, 32241513 - 32241369
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| | ||   |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||||||| ||||||| ||    
T  32241513 tactttcacaacttccaattcatta---tattccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcatttttatc 32241417  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatg 291  Q
    | ||||||||||||| |||| | |||||||||||||||||||||||||    
T  32241416 tctccttcatttatacatttgtcttaatatgtgtgaaaagaaaaaatg 32241369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 5392090 - 5392222
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||| ||||||||||||| |||| | |||    
T  5392090 tatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcatttatacatttgtctta 5392189  T
Q  270 atatgtgtgaaaagaaaaaatggttcagctaat 302  Q
    ||| |||||||| ||  |||||| |||| ||||    
T  5392190 ataggtgtgaaatgagcaaatggctcagttaat 5392222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 29730975 - 29730869
Alignment:
Q  156 ttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcattt 255  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||    
T  29730975 ttccaattcaata-tatattctactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccacttttctctctccttcattt 29730877  T
Q  256 atatattt 263  Q
    ||||||||    
T  29730876 atatattt 29730869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 44790488 - 44790377
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||| |||||||||| ||||||||||||| |||| | |||    
T  44790488 tatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttatacatttgtctta 44790389  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  44790388 atacgtgtgaaa 44790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 39171584 - 39171694
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||| || |||||| ||||| ||||||| |  |||||||||||||||||||| |||||||||||||||||| |||||    
T  39171584 tatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtacttaaaaccatttttctctctccttcatttatatattt-tttta 39171682  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  39171683 ataggtgtgaaa 39171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 28802808 - 28802917
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||||||||||||||||| || |||||||||| |||| | |||    
T  28802808 tatattccactttgcatttatgatagtggagaatagatcaatacttaacaagagcacttaaaaccatttttctctctctttcatttatacatttgtctta 28802907  T
Q  270 atatgtgtga 279  Q
    ||| ||||||    
T  28802908 atacgtgtga 28802917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 9014745 - 9014837
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||| ||||||||||| | ||||||||||||||||    
T  9014745 atattccactttgcatttatgatagtggagaatgcatcaatacttaacaaaagcacttaaaatcatttttctctcttcttcatttatatattt 9014837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 45425526 - 45425614
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||| ||||| |||||||||||||    
T  45425526 tatattccactttgcatttatgatagtggaaaatgcatcaatacttaacaagagcacttaaaaccatttgtctctctccttcatttata 45425614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 5962539 - 5962428
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||||||||||  ||||||| | ||||||||||||| ||||   |||    
T  5962539 tatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaacgttttttctatctccttcatttatacattttcctta 5962440  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  5962439 atatgtgtgaaa 5962428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 31410674 - 31410563
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||||| | ||||||||||  ||||||||| ||||||||||||  |||| | |||    
T  31410674 tatattccactttgcatttatgatagtgtataatgcaccaatatttaacaaaaacacttaaaactgtttttctctctccttcatttattaatttttctta 31410575  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  31410574 atatgtgtgaaa 31410563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 42412449 - 42412338
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||| |||||||||||||||||  | |||||| |||||||||| |||||||||| || |||| ||||| |||| | |||    
T  42412449 tatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcacttatacatttttctta 42412350  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  42412349 atatgtgtgaaa 42412338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 42558647 - 42558540
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||||||| || |||||||||||| ||||  ||||||||||||| |||| | |||    
T  42558647 tatattccactttgcatttatgatagtggagaataaaccaatacttaacaagaacaattaaaaccatttatctc--tccttcatttatacatttgtctta 42558550  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  42558549 atatgtgtga 42558540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 290
Target Start/End: Complemental strand, 12958047 - 12957926
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatata-tttatttt 268  Q
    |||||||||||||| |||||||||||| |||||||||| ||||| ||| |||| ||||||||||||||||||| |||||  |||||||| | ||| ||||    
T  12958047 tatattccactttgtatttatgatagttgagaatgcactaatagataataagagcacttaaaaccatttttctatttccaacatttatacattttttttt 12957948  T
Q  269 aatatgtgtgaaaagaaaaaat 290  Q
    ||||||||||||| ||| ||||    
T  12957947 aatatgtgtgaaatgaacaaat 12957926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 139063 - 139174
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||| ||| |||||||||||| |||||||||  | |||||| ||||||| ||| || |||||||||| |||| | |||    
T  139063 tatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcatttttatctctcattcatttatacatttttctta 139162  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  139163 atatgtgtgaaa 139174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 7258433 - 7258322
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| | ||||||||||||||| ||   |||||||||||| || |||||| | ||||||||||||||||||||||||||||| |||||||| |||||    
T  7258433 tatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctctttccttcattaatatatttttttta 7258334  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  7258333 ataagtgtgaaa 7258322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 13085014 - 13084928
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcattta 256  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||||||||| |||||||||| |||||| ||| |||||||||||    
T  13085014 tatattccactttgcatttatgattgtagagaatgcaccaataattaacaagaacacttaaaactatttttgtctctccttcattta 13084928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 37219853 - 37219694
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatca---cttaaaaccattttt 240  Q
    |||||||||||||| ||||||||||   |||| ||||||  ||||||||||  |||||||||||| ||| ||||||| | ||   ||||||| ||| |||    
T  37219853 tactttcacaactttcaatttaata---tatttcactttatatttatgataagggagaatgcacccatacttaacaacaacaacacttaaaatcatattt 37219757  T
Q  241 ctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    |||| ||||||||||||| |||| | ||||||||||||||| |||||||||  ||||||||||    
T  37219756 ctctctccttcatttatacatttgtcttaatatgtgtgaaatgaaaaaatgactcagctaatt 37219694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 33925118 - 33925034
Alignment:
Q  219 aagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    ||||||||||||||||| | |||||| ||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||    
T  33925118 aagatcacttaaaaccactattctctctccttcatttatacatttgtcttaatatgtgtgaaaagaaaaaatggctcagctaatt 33925034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 38252504 - 38252392
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca-tttttctctttccttcatttatatatttatttt 268  Q
    ||||||||||||| ||||||||| |||||||||||||| |||| ||||||||  |||||||||| | ||||||||| ||||||||||||| |||| | ||    
T  38252504 tatattccactttacatttatgacagtggagaatgcactaatacttaacaagtgcacttaaaactattttttctctctccttcatttatacatttttctt 38252405  T
Q  269 aatatgtgtgaaa 281  Q
    |||| ||||||||    
T  38252404 aatacgtgtgaaa 38252392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 12653728 - 12653839
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||| |||||||| |||||||||||| |||||||   |||||||||| |||||||||| | ||||||||||| |||| | |||    
T  12653728 tatattccactttacatttataatagtggataatgcaccaatatttaacaaacgcacttaaaactatttttctctctacttcatttatacatttttctta 12653827  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  12653828 atacgtgtgaaa 12653839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 22325021 - 22324910
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| |||||||||||||||| ||||||| |||| ||||||||  |||||||||  |||||||||| ||||||||||||| |||| | |||    
T  22325021 tatattccactttacatttatgatagtggaaaatgcactaatatttaacaagtacacttaaaattatttttctctctccttcatttatacatttttctta 22324922  T
Q  270 atatgtgtgaaa 281  Q
    |||  |||||||    
T  22324921 atacttgtgaaa 22324910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 31132744 - 31132866
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||| ||||| | ||   ||||||| ||||||||||||||| ||||||||  ||||||| ||||||||| ||||||||| ||||||    
T  31132744 atactactttcacaactttcaattgatta---tattccattttgcatttatgatactggagaatataccaatacttaacaagagcacttaaaatcatttt 31132840  T
Q  240 tctctttccttcatttatatatttat 265  Q
    ||||| |||||| | |||| ||||||    
T  31132841 tctctatccttcgtctatacatttat 31132866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 2349391 - 2349503
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca-tttttctctttccttcatttatatatttatttt 268  Q
    ||||||||| ||| |||||||||||||||||||||||| |||| |||||||   |||||||||| | ||||||||| ||||||||||||| |||| ||||    
T  2349391 tatattccaatttacatttatgatagtggagaatgcacaaatacttaacaaatgcacttaaaactattttttctctctccttcatttatacatttttttt 2349490  T
Q  269 aatatgtgtgaaa 281  Q
    ||||  |||||||    
T  2349491 aatacatgtgaaa 2349503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 32967343 - 32967232
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||  |||||||||||||||||||| ||||||| |||| |||  |||||||||| |||||||||| | ||||||||||| ||||   |||    
T  32967343 tatattccactttaaatttatgatagtggagaatggaccaatacttaagaagtgcacttaaaactatttttctctcttcttcatttatacattttactta 32967244  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  32967243 atacgtgtgaaa 32967232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 2195509 - 2195627
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| |||||||||||||||||    |||||||||||||| ||||||||| |||| ||||| |||||||||| || |||| ||||| | || || ||    
T  2195509 tatattctactttgcatttatgataagaaagaatgcaccaatacttaacaaga-cactcaaaactatttttctctctctttcacttatacactttttctt 2195607  T
Q  269 aatatgtgtgaaaagaaaaa 288  Q
    ||||||||||||||||||||    
T  2195608 aatatgtgtgaaaagaaaaa 2195627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 7042793 - 7042916
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagtt-aacaagatcacttaaaaccatttttctc-tttccttcatttatatatttattt 267  Q
    ||||||||||||| ||||||||||| | ||||||||||||||| || ||||||| ||||||||  |||||||||| |||  |||||||||| |||| | |    
T  7042793 tatattccactttacatttatgataatagagaatgcaccaatacttaaacaagagcacttaaattcatttttctcttttttttcatttatacatttttct 7042892  T
Q  268 taatatgtgtgaaaagaaaaaatg 291  Q
    | |||||||||||| ||| |||||    
T  7042893 tgatatgtgtgaaatgaataaatg 7042916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 21587318 - 21587402
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||||||||||||||| | | ||||||||||||||||||| ||||||||| |||||||||||    |||||| |||||||||||||    
T  21587318 tatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaacc----ttctctctccttcatttata 21587402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 29615839 - 29615950
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||| |||||| | | |||||||| ||||||||  || ||||||  |||||||||| ||||||||||||| |||| | |||    
T  29615839 tatattccactttacatttatgacagtggaaagtacaccaatacttaacaagtgcatttaaaattatttttctctctccttcatttatacatttttctta 29615938  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  29615939 atacgtgtgaaa 29615950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 3384575 - 3384698
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttc--cttcatttatatatttattt 267  Q
    ||||||| |||||||||||||||||||| |||||  |||||||  ||||||||  | |||| ||||||||||||| ||  ||||||||||| |||| | |    
T  3384575 tatattcaactttgcatttatgatagtgaagaatataccaatacataacaagagtatttaataccatttttctctctcttcttcatttatacatttttct 3384674  T
Q  268 taatatgtgtgaaaagaaaaaatg 291  Q
    |||||||||| ||| ||| |||||    
T  3384675 taatatgtgtaaaatgaacaaatg 3384698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 26677114 - 26677226
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaac-catttttctctttccttcatttatatatttatttt 268  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||| || ||||   ||||||||||  |||||||||| || |||| ||||| |||| | ||    
T  26677114 tatattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttatacatttttctt 26677213  T
Q  269 aatatgtgtgaaa 281  Q
    |||||||||||||    
T  26677214 aatatgtgtgaaa 26677226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 34133168 - 34133256
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||| || ||| |||||||||||||||||||||| |||||| ||||||||  |||||||||  |||||||||| ||||| |||||||    
T  34133168 tatatttcattttacatttatgatagtggagaatgcgccaatacttaacaagtgcacttaaaattatttttctctctcctttatttata 34133256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 138765 - 138674
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    ||||||||||||||||||||||||||  || ||| ||||||||  |||||| | ||||||||| ||||||||||||  ||||||||||| ||||    
T  138765 tatattccactttgcatttatgatagaagaaaatccaccaatacataacaaaaacacttaaaatcatttttctctt--cttcatttatacattt 138674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 27973750 - 27973641
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaat 271  Q
    ||||| ||||||||||||||||| |||  |||| | ||||| || |||||| ||||||||||||||||||||  ||||||| | ||| |||| | |||||    
T  27973750 tattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaatacatttttcttaat 27973651  T
Q  272 atgtgtgaaa 281  Q
    | ||||||||    
T  27973650 aagtgtgaaa 27973641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 28031019 - 28030910
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaat 271  Q
    ||||| ||||||||||||||||| |||  |||| | ||||| || |||||| ||||||||||||||||||||  ||||||| | ||| |||| | |||||    
T  28031019 tattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaatacatttttcttaat 28030920  T
Q  272 atgtgtgaaa 281  Q
    | ||||||||    
T  28030919 aagtgtgaaa 28030910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 14689974 - 14690089
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||| |||||||||||||||||    ||||||||||||||||| | |||  |||| |||||||||||    
T  14689974 atactactttcaccactcccaattcaata---tattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttt 14690070  T
Q  240 tctctttccttcatttata 258  Q
    ||||| || |||| |||||    
T  14690071 tctctctctttcacttata 14690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 15559196 - 15559114
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttca 252  Q
    ||||||| ||||||||||||||||| |||  ||| |||||||| || |||||| ||||||||| ||||||| ||| |||||||    
T  15559196 tatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgtctctccttca 15559114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 4274365 - 4274272
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    |||||| ||||||||||||||||||| |||||||  ||| ||| ||||| | | |||||||||  |||||||||| | ||||||||||| ||||    
T  4274365 tatatttcactttgcatttatgataggggagaatagaccgatatttaacgaaagcacttaaaattatttttctctcttcttcatttatacattt 4274272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 2119755 - 2119831
Alignment:
Q  168 agtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||  ||||| || |||||||||  ||||||||||    
T  2119755 agtatattccactttacatttatgataatgaagaatgtaccaatatataacaggaacacttaaaattatttttctct 2119831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 2119655 - 2119702
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  2119655 gtgtcccaaaataactgagctatttcacatttcaatacaatattaatt 2119702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 5391987 - 5392034
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||    
T  5391987 gtgtctcaaaataactgagtcatttcacttttcaatacaatattaatt 5392034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 44615431 - 44615368
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaac 233  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| ||||||| | ||||| ||||    
T  44615431 tatattctactttgcatttataatagtggagaattcaccaatacttaacaaaaacacttcaaac 44615368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 26570213 - 26570107
Alignment:
Q  175 tccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatg 274  Q
    |||||||||||||||||||| ||  ||||||| ||||| || |||| |||||| ||||  |||| ||||| |  |||| |||||| ||||| ||||||||    
T  26570213 tccactttgcatttatgataatgacgaatgcatcaatacttgacaaaatcactcaaaattatttctctctcttattcacttatatttttatcttaatatg 26570114  T
Q  275 tgtgaaa 281  Q
    | |||||    
T  26570113 tatgaaa 26570107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 40077816 - 40077703
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||  | |||||||||||||| || ||||   |||| |||| ||||||| ||| || |||||||||| | || | |||    
T  40077816 tatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacacttttctta 40077717  T
Q  270 atatgtgtgaaaag 283  Q
    ||||| ||||||||    
T  40077716 atatgagtgaaaag 40077703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 886652 - 886746
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatt---tttctctttccttcatttatatattt 263  Q
    |||| |||| ||||||||| | |||||||||||||| |||| ||||||||| |  |||||||||||   | ||||| ||||||||||||| ||||    
T  886652 tatttcactctgcatttataacagtggagaatgcacaaatacttaacaagaacgtttaaaaccattctctctctctctccttcatttatacattt 886746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 5423226 - 5423122
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatat 273  Q
    |||||||||| |||||||||| |||  ||| |||||||  || |||||  |||| |||| ||||||||||| || |||| ||||  |||||| |||||||    
T  5423226 ttccactttgtatttatgataatggtaaatacaccaatgcttgacaaggacactcaaaatcatttttctctctctttcacttatgcatttatcttaatat 5423127  T
Q  274 gtgtg 278  Q
    |||||    
T  5423126 gtgtg 5423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 33743817 - 33743905
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||| |||||| ||||||||||  | ||||||||| ||||||| | |||  |||| ||| |||||||||||| || ||||||||||    
T  33743817 tatattctactttgtatttatgataaagaagaatgcacaaatagttgataagtacactcaaacccatttttctctctctttcatttata 33743905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 4480531 - 4480433
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatat 273  Q
    ||||||||||  ||||||||| |||||||||||||||||  |||||| |  | ||||||  |||||||||| || |||||||||| |||| | |||||||    
T  4480531 ttccactttgtgtttatgatactggagaatgcaccaatacataacaaaagtatttaaaa-tatttttctctctctttcatttatacatttttcttaatat 4480433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 9734225 - 9734137
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttt 268  Q
    |||||||||||||||||  | ||||||||||||||||| | ||||  ||| ||| |||||||||||  || |||||||||| |||| ||||    
T  9734225 actttgcatttatgataaagaagaatgcaccaatagttgataagaatactcaaatccatttttctc--tctttcatttatacatttttttt 9734137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 27868391 - 27868280
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||||||||||||||| ||   |||| | ||||| || |||||| ||| ||||||||||||||||  || |||| | ||| |||| | |||    
T  27868391 tatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttttctccatcattcactaatacatttttctta 27868292  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  27868291 ataagtgtgaaa 27868280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 38252606 - 38252559
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||||| |||||||||||  ||||||||||||||    
T  38252606 gtgtcccaaaataactgaaccatttcactttttgatacaatattaatt 38252559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 10728988 - 10728919
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccattttt 240  Q
    |||||||||||||||||||||||||    ||||||||| |||| ||||||||| |||| ||||| ||||||    
T  10728988 tatattccactttgcatttatgataagaaagaatgcacaaatacttaacaaga-cactcaaaactattttt 10728919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 14748772 - 14748698
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||||||||||||||  | ||||||||| ||||||| | |||| |||| ||| |||| |||||||    
T  14748772 tatattctactttgcatttatgataaagaagaatgcactaatagttgataagagcactcaaacccatatttctct 14748698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 29567144 - 29567189
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||||    
T  29567144 tgtctcaaaataact-acctatttcacttttcaatacagtattaatt 29567189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 33826181 - 33826223
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatttt 130  Q
    ||||||| |||  ||||||||||||||||||||||||||||||    
T  33826181 aaaataattgacttatttcacttttcaatacaatattaatttt 33826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 38908766 - 38908812
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||| || ||| |||||||||||||||||||||||| ||||    
T  38908766 tgtctcaaaaaaattgatctatttcacttttcaatacaatatcaatt 38908812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 29615743 - 29615784
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||  |||| ||||||||||||||||||||||    
T  29615743 caaaataactgaatcattttacttttcaatacaatattaatt 29615784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 33191071 - 33191030
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||   |||||||||||||||||||||||||||    
T  33191071 caaaataactgagtcatttcacttttcaatacaatattaatt 33191030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 37459364 - 37459436
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagtt 215  Q
    ||||||||||||| ||| |||||||||||   ||||| |||||||||||||||||  | ||||| || ||||||||    
T  37459364 atactactttcaccactcccaatttaata---tattcaactttgcatttatgataaagaagaatacatcaatagtt 37459436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 39416352 - 39416472
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaata-gttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||| ||||||||||||||| | |||||||||| ||||  ||| ||| | ||||||||| ||| ||| ||| |  ||| ||||||||||| | |||    
T  39416352 atattccaatttgcatttatgatattagagaatgcacaaatactttatcaaaaacacttaaaatcatctttatctctttttc-tttatatatttttctta 39416450  T
Q  270 atatgtgtgaaaagaaaaaatg 291  Q
    ||| |||||||| ||| |||||    
T  39416451 atacgtgtgaaatgaacaaatg 39416472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 22490432 - 22490472
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaa 210  Q
    |||||||||||||| ||||||||||||| ||||| ||||||    
T  22490432 tatattccactttgtatttatgatagtgaagaatccaccaa 22490472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 26570320 - 26570280
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  26570320 aaaataactgattcatttcacttttcaatacaatattaatt 26570280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 29638401 - 29638453
Alignment:
Q  229 aaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||||||||||||||||| |||||||||| | || | ||||| |||||||||    
T  29638401 aaaaccatttttctctttctttcatttatacacttttcttaatctgtgtgaaa 29638453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 29731029 - 29730989
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  29731029 aaaataactgagtcatttcacttttcaatacaatattaatt 29730989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 32241585 - 32241545
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||| |||  ||||||||||||||||||||||||||||    
T  32241585 aaaataaatgagttatttcacttttcaatacaatattaatt 32241545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 33925177 - 33925130
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttat 190  Q
    |||||||||||||||||| ||||| ||||   |||||||||||||||||||    
T  33925177 atactactttcacaactttcaattcaata---tattccactttgcatttat 33925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 45420997 - 45420917
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||||||  | ||||||| |||| |||| |||||  |||| ||| |||||||||||| || |||| |||||    
T  45420997 actttgcatttatgataaagaagaatgctccaaaagttgacaagggcactcaaacccatttttctctctctttcacttata 45420917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 18849848 - 18849692
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| ||||   |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||     
T  18849848 tactttcacaacttccaattcaata---tatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccatatttctt 18849752  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    | ||||||||||||| |||| | |||||||||||||||  ||||||||| | ||||||||    
T  18849751 tctccttcatttatacatttgtcttaatatgtgtgaaataaaaaaatggcttagctaatt 18849692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 4360474 - 4360342
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||||| ||||||||||  ||| | |||    
T  4360474 tatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatacttttttctta 4360375  T
Q  270 atatgtgtgaaaagaaaaaatggttcagctaat 302  Q
    |||||||||||| ||| |||||| |||| ||||    
T  4360374 atatgtgtgaaatgaacaaatggctcagttaat 4360342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 42024294 - 42024158
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||  |||||||||| ||||   ||||||||||||||||||| ||||||||||||  ||||||| |||||||||  | |||||||||||||    
T  42024294 atactactttcatcacttccaattcaata---tattccactttgcatttataatagtggagaatagaccaatacttaacaagagtagttaaaaccatttt 42024198  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||| ||||||||||||| |||| | |||||||||||||    
T  42024197 tctctctccttcatttatacatttgtcttaatatgtgtga 42024158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 17237084 - 17237195
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||||  ||||| ||| |||| ||||||| |||||||||||| |||||||||| |||||||||||||||||| | |||    
T  17237084 tatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttatatatttttctta 17237183  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  17237184 ataggtgtgaaa 17237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 16493385 - 16493231
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||| ||||||||||| ||||   |||||||||||||||| |||||||  |||||||||| |||| ||| ||| | ||||||||||||||||| ||    
T  16493385 tactttcataacttccaattcaata---tattccactttgcatt-atgatagctgagaatgcacaaatactta-caaaaacacttaaaaccatttttttc 16493291  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    | || || ||||||| |||||| ||||||||||||||| |||||||||| ||||||||||    
T  16493290 tctcttttatttatacatttatcttaatatgtgtgaaatgaaaaaatggctcagctaatt 16493231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 31862830 - 31862963
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||| |||||||||| ||| |||| ||||| |||||||||  | |||||||||||||||||  ||||||||| ||| |||| |||||    
T  31862830 tatattccactttgcatctatgatagtgaagagtgcatcaatacttaacaagagaaattaaaaccatttttctccatccttcattgatacatttgtttta 31862929  T
Q  270 atatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    |||||||||||| |||||||| | ||| ||||||    
T  31862930 atatgtgtgaaatgaaaaaatagctcaactaatt 31862963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 41710210 - 41710101
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||||||||||||||| ||| | ||||||||||| |||| | |||    
T  41710210 tatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatttatacatttgtctta 41710111  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  41710110 atatgtgtga 41710101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 49306628 - 49306737
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||||||||||||||| |||||||  ||||||| ||||||||| ||||||||||||||||||||| || |||||||||| |||| | |||    
T  49306628 tatattccactttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaaccatttttctctctctttcatttatacatttgtctta 49306727  T
Q  270 atatgtgtga 279  Q
    | ||||||||    
T  49306728 aaatgtgtga 49306737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 303
Target Start/End: Original strand, 43421318 - 43421467
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| ||||   |||| || ||||||||||||||||||||||||| ||||||| || ||||       ||||| |||| |||||    
T  43421318 tactttcacaacttccaattcaata---tatttcattttgcatttatgatagtggagaatgtaccaatatttgacaa-------taaaatcattgttctc 43421407  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    | | ||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||    
T  43421408 tcttcttcatttatacatttatcttaatatgtgtgaaaagaaaaaatgactcagctaatt 43421467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 22872454 - 22872341
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaa--gatcacttaaaaccatttttctctttccttcatttatatatttattt 267  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || ||||  || ||||||||||||||||||||| | ||||| ||||| |||| | |    
T  22872454 tatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaaccatttttctctcttcttcacttatacatttttct 22872355  T
Q  268 taatatgtgtgaaa 281  Q
    ||||||||||||||    
T  22872354 taatatgtgtgaaa 22872341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 26185224 - 26185332
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaa 270  Q
    ||||||||| |||||||||||||||||||||||  ||||||| |||||||||  | |||||||||||||||||| ||||||||||||| |||| | || |    
T  26185224 atattccacgttgcatttatgatagtggagaatagaccaatacttaacaagagtatttaaaaccatttttctctctccttcatttatacatttgtcttga 26185323  T
Q  271 tatgtgtga 279  Q
    |||||||||    
T  26185324 tatgtgtga 26185332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 28974347 - 28974458
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||| | |||||||||||| |||| |||  | |||||||||| |||| | |||    
T  28974347 tatattcccctttgcatttatgataatggagaatgcaccaatacttaacaacaacacttaaaaccacttttatctccctttcatttatacatttgtctta 28974446  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  28974447 atatgtgtgaaa 28974458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 39979821 - 39979932
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||  |||||||||| |||||||| | | ||||||||||| |||| | |||    
T  39979821 tatattccactttacatttatgatagtggagaatgcaccgatacttaacaagtgcacttaaaactatttttctttctacttcatttatacatttttctta 39979920  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  39979921 atacgtgtgaaa 39979932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 41203778 - 41203889
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||| ||||||| ||||| |||||||| ||||| ||||||||| |||| |||||||||||||| | ||||||||||||| |||| | |||    
T  41203778 tatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcatttatacatttttctta 41203877  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  41203878 atacgtgtgaaa 41203889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 49812270 - 49812381
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||||||  |||||||||| |||||| ||| ||||||||||||| |||| | |||    
T  49812270 tatattccactttacatttatgatagtggataatgcaccaatacttaacaagtgcacttaaaactatttttttctctccttcatttataaatttttctta 49812369  T
Q  270 atatgtgtgaaa 281  Q
    |||  |||||||    
T  49812370 atacatgtgaaa 49812381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 8295081 - 8295202
Alignment:
Q  181 ttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaa 280  Q
    |||||||||||||||||||||||||||||||| ||| |||||  ||||||||| |||||||||| || |||||||||| |||| | ||||| ||||||||    
T  8295081 ttgcatttatgatagtggagaatgcaccaatacttatcaagaggacttaaaacaatttttctctctctttcatttatacatttttcttaatttgtgtgaa 8295180  T
Q  281 aagaaaaaatggttcagctaat 302  Q
    | ||  |||||| |||| ||||    
T  8295181 atgagcaaatggctcagttaat 8295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 54729550 - 54729457
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||| | |||||||||| |||||||||| || |||||||||| ||||    
T  54729550 tatattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttatacattt 54729457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 283543 - 283455
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||| |||| | |||||||||||||||| |||| ||||||||| |||||||||| |||||||||| |||||||||||||    
T  283543 tatattccactttgaatttctaatagtggagaatgcacaaatacttaacaagagcacttaaaacaatttttctctctccttcatttata 283455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 41436523 - 41436635
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaa 270  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||| ||| ||  ||| ||||| | || | ||||    
T  41436523 atattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttttctctctctcacttatacacttttcttaa 41436622  T
Q  271 tatgtgtgaaaag 283  Q
    |||||||||||||    
T  41436623 tatgtgtgaaaag 41436635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 33047533 - 33047644
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||| |||||||||||||||||||  ||||||| ||||||| | ||||||||||||||||||||| | |||  |||||| |||| | |||    
T  33047533 tatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccatttttctctcttctttgtttatacatttttctta 33047632  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  33047633 ataggtgtgaaa 33047644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 49448890 - 49448988
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtg 276  Q
    ||||||||||||||||| | |||||||||| |||| || |||||| ||||||||||||||||||||| ||||||| ||||| |||| | ||||||||||    
T  49448890 actttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttatacatttttcttaatatgtg 49448988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 9093828 - 9093747
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttc 251  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||||||||  |||||||||| |||||||||| ||||||    
T  9093828 tatattccactttacatttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttttctctctccttc 9093747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 274
Target Start/End: Original strand, 27977188 - 27977292
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||||||||| |||||||| || |  || ||||||| |||| | |||    
T  27977188 tatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaaacacttaaaatcatttttcactctaatttatttatacatttttctta 27977287  T
Q  270 atatg 274  Q
    |||||    
T  27977288 atatg 27977292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 42185862 - 42185730
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| ||| ||| ||||||||||||||| |||  ||||||| ||||||||| ||||||||| ||||||||| | ||||||||||||| |||| | |||    
T  42185862 tatatttcaccttgtatttatgatagtggataatagaccaatacttaacaagagcacttaaaatcatttttctatctccttcatttatacatttgtctta 42185763  T
Q  270 atatgtgtgaaaagaaaaaatggttcagctaat 302  Q
    |||||| |||   ||| ||||||||||| ||||    
T  42185762 atatgtatgatttgaacaaatggttcagttaat 42185730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 4357618 - 4357711
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatat 273  Q
    |||| ||||||||||||| ||||| |||||||| ||||||| | ||||||||| ||| ||||||| |||||||||||||||||| | |||||||    
T  4357618 tttgtatttatgatagtgaagaatccaccaatacttaacaaaaacacttaaaatcatctttctctctccttcatttatatatttttcttaatat 4357711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 38977032 - 38977140
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaa-tgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttt 268  Q
    ||||||||||||| |||||||||||| |||||| |||||||||| |||| |||  |||||||||| |||||||||| | ||||||||||| |||| | ||    
T  38977032 tatattccactttacatttatgataggggagaaatgcaccaatacttaagaagtgcacttaaaactatttttctctcttcttcatttatacatttttctt 38977131  T
Q  269 aatatgtgt 277  Q
    |||| ||||    
T  38977132 aatacgtgt 38977140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 39976456 - 39976339
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||| | | ||||||||||||||||||| ||||||||| |||||||||||    |||||| |||||||||||||  ||  | |||    
T  39976456 tatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaacc----ttctctctccttcatttatacgttcttctta 39976361  T
Q  270 atatgtgtgaaaagaaaaaatg 291  Q
    |||||| ||||| ||| |||||    
T  39976360 atatgtatgaaatgaacaaatg 39976339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 34021086 - 34021189
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgt 277  Q
    ||||||||||||||||||| |||||||||||||||   ||||||| |||| ||||  |||||||||| ||||| ||||||| |||| | | |||||||||    
T  34021086 actttgcatttatgatagtagagaatgcaccaataccgaacaagaacactgaaaattatttttctctctcctttatttatacatttgtctcaatatgtgt 34021185  T
Q  278 gaaa 281  Q
    ||||    
T  34021186 gaaa 34021189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 35909639 - 35909528
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||| |||||||| |||||||||||| |||||||   |||||||||  |||||| |||||| |||||||||| |||| | |||    
T  35909639 tatatttcactttacatttataatagtggaaaatgcaccaatacttaacaaatacacttaaaattatttttatctttcattcatttatacatttttctta 35909540  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  35909539 atacgtgtgaaa 35909528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 43335089 - 43334978
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||  ||| |||||||||||| |||| || |||||| |||||||||  |||||||| || | |||||||||| |||| | |||    
T  43335089 tatattccactttccatttaaaataatggagaatgcactaatatttgacaagaacacttaaaattatttttctattacattcatttatacatttttctta 43334990  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  43334989 atatgtgtgaaa 43334978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 1825314 - 1825201
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgca--ccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattt 267  Q
    ||||||||||||| ||||||||| ||| |||||||||  | |||| ||||||||  |||||||||| |||||||| | ||||| ||||||| |||| | |    
T  1825314 tatattccactttacatttatgaaagttgagaatgcatactaatacttaacaagtgcacttaaaactatttttctatctcctttatttatacatttttct 1825215  T
Q  268 taatatgtgtgaaa 281  Q
    ||||||||||||||    
T  1825214 taatatgtgtgaaa 1825201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 3686052 - 3686161
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccattttt--ctctttccttcatttatatatttattt 267  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |  |||||||||  |||||  || | ||||||||||||||||||   |    
T  3686052 tatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaacttttttttcctatctccttcatttatatattttcct 3686151  T
Q  268 taatatgtgt 277  Q
    ||||||||||    
T  3686152 taatatgtgt 3686161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 273
Target Start/End: Original strand, 30568700 - 30568807
Alignment:
Q  170 tatattccactttgcatttatgatagtgga----gaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttat 265  Q
    |||||| |||||||||||||||||||  ||    |||||||| |||| ||||||| | |||||||||||||||||||||||||||| |||||| |||| |    
T  30568700 tatatttcactttgcatttatgatagcagagaatgaatgcactaatacttaacaataacacttaaaaccatttttctctttccttcctttatacattttt 30568799  T
Q  266 tttaatat 273  Q
     |||||||    
T  30568800 cttaatat 30568807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 42544250 - 42544324
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||||||||||||||||||||||||||||||  || |||| ||||||||| ||||||||| ||||| |||||    
T  42544250 tatattccactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaatcatttctctct 42544324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 50328137 - 50328068
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||| |||||||||||||||||||||| ||||||||||||| || |||||  ||||||||||||||||    
T  50328137 tatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaagtacacttaaaaccatttt 50328068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 39258338 - 39258225
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagt---taacaagatcacttaaaaccatttttctctttccttcatttatatatttatt 266  Q
    ||||||||| ||| |||||||||||||  ||||||||| ||||||   |||||||| ||||||||| |||||| |||| || |||| ||||| |||| ||    
T  39258338 tatattccattttacatttatgatagtaaagaatgcacgaatagtgcttaacaagagcacttaaaatcatttt-ctctctcattcacttatacatttttt 39258240  T
Q  267 ttaatatgtgtgaaa 281  Q
    |||||||||||||||    
T  39258239 ttaatatgtgtgaaa 39258225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 38160218 - 38160115
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| ||||||| |||||||||| ||||||||||| ||||| || ||||   |||||||||| |||||||||| ||||| ||||||| |||| | |||    
T  38160218 tatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttatttatacatttttctta 38160119  T
Q  270 atat 273  Q
    ||||    
T  38160118 atat 38160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 8065574 - 8065644
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccattttt 240  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||  |||||||||| ||||||    
T  8065574 tatataccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattttt 8065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 4727562 - 4727654
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    ||||||| | ||||||||||||||| |||| |||||| ||||| ||||||||| || || ||| ||||||||||| ||||||| ||||||||||    
T  4727562 tatattctaatttgcatttatgataatggaaaatgcatcaatatttaacaagaaca-tttaaatcatttttctctctccttcaattatatattt 4727654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 6506176 - 6506091
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttat 257  Q
    ||||||| ||||||||||||||||| |||||||||| |||| ||||||| |  | ||||||||| |||||| | ||||||||||||    
T  6506176 tattccattttgcatttatgatagtagagaatgcacaaatatttaacaaaaatatttaaaaccaattttctttctccttcatttat 6506091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 21240932 - 21241040
Alignment:
Q  168 agtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca-tttttctctttccttcatttatatatttatt 266  Q
    |||||||| |||||||||||||||||| ||| ||||  ||||||| || |||||| |||||||||| | ||||||||| |||||||  |||| |||| |     
T  21240932 agtatatttcactttgcatttatgataatggtgaattgaccaatacttgacaagagcacttaaaactattttttctctctccttcacctatacatttttc 21241031  T
Q  267 ttaatatgt 275  Q
    |||||||||    
T  21241032 ttaatatgt 21241040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 45290085 - 45290184
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtg 276  Q
    ||||||||||||| ||||||||||||| |||||||| || | || | |||||||||| ||||||| || ||||| ||||||| |||| | ||||||||||    
T  45290085 cactttgcatttacgatagtggagaatacaccaatactt-agaatagcacttaaaactatttttccctctcctttatttatacatttttcttaatatgtg 45290183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 37309747 - 37309826
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttat 257  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||| || |||||  ||||||||||| || || ||||||    
T  37309747 actttgcatttatgatagtagagaatgcatcaatacttaacaagaacaattaaagtcatttttctctctcatttatttat 37309826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 1796335 - 1796282
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagt 196  Q
    |||||||||||||||||||||||| ||||   |||||||||||||||||||||||||    
T  1796335 atactactttcacaacttccaattcaata---tattccactttgcatttatgatagt 1796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 18509882 - 18509956
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    |||||||||||||| ||||||| |||| || |||||||||||| |||||||||  ||||||||  ||||||||||    
T  18509882 tatattccactttgtatttatgttagtagataatgcaccaatacttaacaagaatacttaaaaatatttttctct 18509956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 48740561 - 48740603
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaata 212  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  48740561 tatattccactttacatttatgatagtggagaatgcaccaata 48740603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 41371314 - 41371249
Alignment:
Q  214 ttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||||||| |||||||||| |||||| ||  |||||||||||||||||| | |||||||||||||    
T  41371314 ttaacaagagcacttaaaactatttttttcactccttcatttatatatttgtcttaatatgtgtga 41371249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 38319952 - 38320040
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||| |||||||||||||||||  | ||||||||||||||||| | |||  |||| ||| |||||||||||| || |||| |||||    
T  38319952 tatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttata 38320040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 2906736 - 2906815
Alignment:
Q  202 atgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||||||||| ||||| | | || ||||||||||||||| || || |||||||||| || | |||||||||||||||||    
T  2906736 atgcaccaatacttaacgaaaacatttaaaaccatttttcactctcattcatttatacatattttttaatatgtgtgaaa 2906815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 14009700 - 14009601
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| || ||||||||||| |||||||||||| || ||||| ||||||| |   |  ||||||| |||||||| ||||||||||||| |||| |||||    
T  14009700 tatatttcattttgcatttataatagtggagaatacatcaatacttaacaaaagttcacaaaaccacttttctctctccttcatttatacatttttttta 14009601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 25149465 - 25149567
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtgga-gaatgcaccaatagttaacaagatcacttaaaaccattt 238  Q
    |||||||||||||||||||||||| ||   ||||||||||||| |||||||||||   || ||||||||||||| |||| ||   |||| ||||| ||||    
T  25149465 atactactttcacaacttccaattcaa---tatattccactttacatttatgataaaagaggaatgcaccaatacttaaaaaaggcactcaaaactattt 25149561  T
Q  239 ttctct 244  Q
    ||||||    
T  25149562 ttctct 25149567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 45289976 - 45290019
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatatt 124  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  45289976 gtgtctcaaaataactgaattatttcacttttcagtacaatatt 45290019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 26799282 - 26799208
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| | |||||||||||||||||||| ||| || ||||| |||| |||| |||||||| | ||||||||||    
T  26799282 tatattctattttgcatttatgatagtggaaaatacatcaatacttaaaaagaacacttaaatctatttttctct 26799208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 40881256 - 40881182
Alignment:
Q  172 tattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctcttt 246  Q
    ||||||||||| |||||||||||||||||||| || ||||| |||||||    | ||||||| ||||||||||||    
T  40881256 tattccactttacatttatgatagtggagaatacatcaatatttaacaaatgtaattaaaactatttttctcttt 40881182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 51527459 - 51527501
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaata 212  Q
    |||||| |||||| |||||||||||||||||||||||||||||    
T  51527459 tatatttcactttacatttatgatagtggagaatgcaccaata 51527501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 42670423 - 42670338
Alignment:
Q  196 tggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||||||||||||||| |||| |||  ||||||| || |||||||||| || || ||||||| |||| | |||||| ||||||||    
T  42670423 tggagaatgcaccaatacttaagaagtgcacttaagactatttttctctctcatttatttatacatttttcttaatacgtgtgaaa 42670338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 47787899 - 47787802
Alignment:
Q  184 catttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||||||||||| || ||||| || || ||||||||  | |||||||| |||||| ||| | ||||||||||| |||| | |||||| ||||||||    
T  47787899 catttatgatagtgaaggatgcatcagtacttaacaagtgcccttaaaactatttttatctcttcttcatttatacatttttcttaatacgtgtgaaa 47787802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 1796277 - 1796241
Alignment:
Q  267 ttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1796277 ttaatatgtgtgaaaagaaaaaatggctcagctaatt 1796241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 9778945 - 9778881
Alignment:
Q  225 acttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaa 289  Q
    ||||||||| |||||||||||||||||| | ||||| || | |||||| |||||||| |||||||    
T  9778945 acttaaaacaatttttctctttccttcactaatatacttttcttaataagtgtgaaatgaaaaaa 9778881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 13529911 - 13530014
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-ttaatatgtg 276  Q
    ||||| ||||||| |||  ||| ||||||||||||||| |||||| |||| |||||||||||||||| || |||  || || |||| || ||||||||||    
T  13529911 actttacatttatcataagggaaaatgcaccaatagttcacaaga-cactcaaaaccatttttctctctctttcgcttgtacattttttcttaatatgtg 13530009  T
Q  277 tgaaa 281  Q
    |||||    
T  13530010 tgaaa 13530014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 43335184 - 43335144
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  43335184 aaaataactgatttatttcacttttcaatacaatattaatt 43335144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 54729648 - 54729604
Alignment:
Q  84 tctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||    
T  54729648 tctcaaaataactgaatcatttcactttccaatacaatattaatt 54729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 28330844 - 28330923
Alignment:
Q  179 ctttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||||||||||||  | ||||||||||||||||| | |||  |||| ||| |||||||||||| || |||| |||||    
T  28330844 ctttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttata 28330923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 32559204 - 32559315
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||| |||||| |||| |||||||||||| ||  |||| ||||||| | || ||||||  |||||| ||  | ||| ||||||| |||| | |||    
T  32559204 tatattccattttgcacttattatagtggagaatacattaatacttaacaaaagcatttaaaaatatttttatcccttctttatttatacatttttctta 32559303  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  32559304 atatgtgtgaaa 32559315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 33047437 - 33047484
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| ||||||||||||   |||||||||||||||||||||||||||    
T  33047437 gtgtcccaaaataactgagtcatttcacttttcaatacaatattaatt 33047484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 48262175 - 48262254
Alignment:
Q  184 catttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    |||||| ||||||| | ||||||| |||| |||| |||| |||||||||| |||||||||| |  || ||||||||||||    
T  48262175 catttacgatagtgaaaaatgcacaaataattaataagaacacttaaaactatttttctctcttttttatttatatattt 48262254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 4354462 - 4354602
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||  ||||||||||   ||||| |  || |||||||||||  | | | |||||||||| |||| || | |||| ||||| |||||    
T  4354462 atactactttcacaactctcaatttaata---tattctaaattacatttatgataaagaatagtgcaccaatatttaaaaaaaacactcaaaactatttt 4354558  T
Q  240 tctctttcc--ttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||| ||   ||| ||||||||||| | |||||||||||||||    
T  4354559 tctctctctctttcttttatatatttttcttaatatgtgtgaaa 4354602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 10309311 - 10309234
Alignment:
Q  180 tttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||||  | ||||| |||||||| |||| |||| |||||||||  ||||||||||||| || |||||||    
T  10309311 tttgcatttatgataccgcagaatacaccaatatttaagaaga-cacttaaaattatttttctctttctttaatttata 10309234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 36047166 - 36047092
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||||||||||||||  | ||||||||| ||||||| | |||| |||| | | ||||||||||||    
T  36047166 tatattctactttgcatttatgataaagaagaatgcactaatagttgataagagcactcatacccatttttctct 36047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 44020824 - 44020786
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaata 212  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  44020824 ttccactttacatttatgatagtggataatgcaccaata 44020786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 48740460 - 48740506
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||   |||||||||||||| ||||||||||||    
T  48740460 tgtctcaaaataactgagtcatttcacttttcaaaacaatattaatt 48740506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 49812169 - 49812215
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||| ||||||||||||   |||||||||||||||||||||||||||    
T  49812169 tgtcccaaaataactgagtcatttcacttttcaatacaatattaatt 49812215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 51572388 - 51572346
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatttt 130  Q
    ||||||| |||  ||||||||||||||||||||||||||||||    
T  51572388 aaaataattgacttatttcacttttcaatacaatattaatttt 51572346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 52677089 - 52677015
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttca 252  Q
    ||||| ||||||||||| ||   |||||| ||||| ||| ||||| ||||||||| |||||||||||||| ||||    
T  52677089 actttacatttatgataatgataaatgcatcaatacttatcaagagcacttaaaatcatttttctctttcattca 52677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 4485918 - 4486018
Alignment:
Q  181 ttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-ttaatatgtgtga 279  Q
    |||||||||||||| |||| |||| |  |||| || |||| | |||| ||||| ||||||||||||| |||| |||||||||| || ||||||| |||||    
T  4485918 ttgcatttatgataatggaaaatgaattaatatttgacaaaa-cactcaaaactatttttctctttctttcacttatatattttttcttaatatttgtga 4486016  T
Q  280 aa 281  Q
    ||    
T  4486017 aa 4486018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 258
Target Start/End: Original strand, 8759800 - 8759908
Alignment:
Q  147 tttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctcttt 246  Q
    |||||||||| |||||| ||||   ||||| |||||||||||||||||  | | |||||| |||||||| | |||   ||| ||| |||||||||||| |    
T  8759800 tttcacaactcccaattcaata---tattctactttgcatttatgataaagaaaaatgcatcaatagttgataagtgaactgaaacccatttttctctct 8759896  T
Q  247 ccttcatttata 258  Q
    | ||||||||||    
T  8759897 ctttcatttata 8759908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 20964381 - 20964309
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagtt 215  Q
    ||||||||||||| ||||||||||  |   ||||||| |||||||||||| ||||  | |||||||||||||||||    
T  20964381 atactactttcaccacttccaattcga---tatattctactttgcatttacgataaagaagaatgcaccaatagtt 20964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 28974251 - 28974292
Alignment:
Q  86 tcaaaataactgaactatttcacttttcaatacaatattaat 127  Q
    |||||||||||||   ||||||||||||||||||||||||||    
T  28974251 tcaaaataactgagtcatttcacttttcaatacaatattaat 28974292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 29644295 - 29644340
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaat 127  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||    
T  29644295 tgtcccaaaataactgagacatttcacttttcaatacaatattaat 29644340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 42132831 - 42132899
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagtt 215  Q
    ||||||||| |||||||||| ||||   ||||| |||||||||||||||||  | |||||||| ||||||||    
T  42132831 tactttcaccacttccaattcaata---tattctactttgcatttatgataaagaagaatgcatcaatagtt 42132899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 48400697 - 48400576
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||  | ||||| || ||||| || | || | || | |||| ||||||||||| || |||||||||| |||| | |||    
T  48400697 tatattctactttacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaatcatttttctctctctttcatttatacatttttctta 48400598  T
Q  270 atatgtgtgaaaagaaaaaatg 291  Q
    || ||||||||| || ||||||    
T  48400597 atctgtgtgaaatgagaaaatg 48400576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 18873101 - 18873073
Alignment:
Q  100 ctatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||||||||||||||    
T  18873101 ctatttcacttttcaatacaatattaatt 18873073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 19688262 - 19688302
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  19688262 aaaataaatgacctatttcacttttcaatacaatatcaatt 19688302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 20879665 - 20879609
Alignment:
Q  224 cacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaa 280  Q
    ||||||||||||||||| | | ||||| | ||||| ||||||||||||| |||||||    
T  20879665 cacttaaaaccatttttatttctcctttacttatacatttattttaataagtgtgaa 20879609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 20964443 - 20964415
Alignment:
Q  100 ctatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||||||||||||||    
T  20964443 ctatttcacttttcaatacaatattaatt 20964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 27655305 - 27655261
Alignment:
Q  235 atttttctctttccttcatttatatatttattttaatatgtgtga 279  Q
    |||||||||| ||||||||||||| |||| | |||||||||||||    
T  27655305 atttttctctctccttcatttatacatttgtcttaatatgtgtga 27655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 29136851 - 29136767
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||||||||||  || |||||||||  || || |||| |   ||||||||||||||||||| || |||| |||||    
T  29136851 ttccactttgcatttatgataaaggtgaatgcacccgtacttgacaaaaatgcttaaaaccatttttctctctcattcacttata 29136767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 32323622 - 32323650
Alignment:
Q  100 ctatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||||||||||||||    
T  32323622 ctatttcacttttcaatacaatattaatt 32323650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 39979726 - 39979766
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||| |||  ||||||||||||||||||||||||||||    
T  39979726 aaaataattgagttatttcacttttcaatacaatattaatt 39979766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 40293513 - 40293541
Alignment:
Q  102 atttcacttttcaatacaatattaatttt 130  Q
    |||||||||||||||||||||||||||||    
T  40293513 atttcacttttcaatacaatattaatttt 40293541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 41436427 - 41436467
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||| || | |||||||||||||||||||||||||||    
T  41436427 aaaataaccgaccaatttcacttttcaatacaatattaatt 41436467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 49448785 - 49448825
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||| | |||||||||||||||| ||||||||||    
T  49448785 aaaataactgatccatttcacttttcaatataatattaatt 49448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 50714623 - 50714691
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccattt 238  Q
    |||||||||||||  |||||||||| ||| |||||||| | || || |||||| |||||||||| ||||    
T  50714623 tatattccactttcaatttatgataatggtgaatgcactactacttgacaagagcacttaaaactattt 50714691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 281
Target Start/End: Original strand, 31265797 - 31265931
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| ||||   ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  31265797 tactttcacaacttccaattcaata---tattccactttacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactatttttctc 31265893  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    | ||||||||||||| |||| | |||||||||||||||    
T  31265894 tctccttcatttatacatttgtcttaatatgtgtgaaa 31265931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 288
Target Start/End: Complemental strand, 3604689 - 3604548
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||  ||| ||||||||||||||||| |||||||||  |||||||||||||||||||    
T  3604689 tactttcacaacttccaattcaata---tattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccatttttctc 3604593  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaa 288  Q
    | || || ||||||| |||| | ||||||||||||||| ||||||    
T  3604592 tctcttttatttatacatttgtcttaatatgtgtgaaatgaaaaa 3604548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 148 - 303
Target Start/End: Original strand, 4238443 - 4238593
Alignment:
Q  148 ttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttc 247  Q
    |||||||||| ||||| |||||   ||| |||||| |||||||||||||| |||||||||||||| ||||||||| |||||||||| || ||||||  ||    
T  4238443 ttcacaactttcaattcaatag---atttcactttacatttatgatagtgaagaatgcaccaatacttaacaagagcacttaaaactatatttctc--tc 4238537  T
Q  248 cttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
     |||||||||| |||||| || |||||||||||| |||||||||  ||||||||||    
T  4238538 tttcatttatacatttatcttgatatgtgtgaaatgaaaaaatgactcagctaatt 4238593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 15081437 - 15081575
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||| || |||||||| ||||   ||||||||||| | |||||||||||||||||||||| |||| ||||||||  |||||||||| |||||    
T  15081437 atactactttcataatttccaattcaata---tattccactttacgtttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttt 15081533  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||  |||||||||||| |||| | |||||| ||||||||    
T  15081534 tctctcaccttcatttatacatttttcttaatacgtgtgaaa 15081575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 14306300 - 14306220
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttat 257  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||| | ||||||||||||    
T  14306300 cactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttctatgtccttcatttat 14306220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 14312707 - 14312627
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttat 257  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||| | ||||||||||||    
T  14312707 cactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttctatgtccttcatttat 14312627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 9755213 - 9755102
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||| | ||||||||||||||||||||| ||||||| |||||| |   ||||||||| |||||||||| | |||||||||||||||| | |||    
T  9755213 tatattctactctacatttatgatagtggagaatgtaccaatacttaacacgtgaacttaaaactatttttctctcttcttcatttatatatttttctta 9755114  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  9755113 atacgtgtgaaa 9755102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 263
Target Start/End: Complemental strand, 9354536 - 9354413
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||||||| | |||| |||||||||||| ||| | |||||||||||  | |||||| ||||||| |||||||   |||| |||||||||||    
T  9354536 atactactttcacaactcctaattcaatagtatattctactctacatttatgataaagaagaatggaccaatatttaacaaagacactcaaaaccatttt 9354437  T
Q  240 tctctttccttcatttatatattt 263  Q
    ||||| || |||| | ||||||||    
T  9354436 tctctctcattcactaatatattt 9354413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 30064015 - 30063904
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||| |||||||||||| ||| |||| |||| || | ||||||||||  ||||||| | ||||||||||||| ||||   |||    
T  30064015 tatattccactttgcatttataatagtggagaatacacaaatacttaataaaagcacttaaaactttttttctttctccttcatttatacattttcctta 30063916  T
Q  270 atatgtgtgaaa 281  Q
    ||||| ||||||    
T  30063915 atatgcgtgaaa 30063904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 7301146 - 7301037
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| |||||||   |||||||||| |||||||||  || || ||||||| |||| | |||    
T  7301146 tatattccactttacatttatgataatggagaatgcacaaatacttaacaaacacacttaaaactatttttctc--tcatttatttatacatttttctta 7301049  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  7301048 atacgtgtgaaa 7301037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 33921562 - 33921424
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||| |||||| |||||| ||||   ||||| ||||| |||||||||||  | |||||| ||||||| |||||||   |||| |||||||||||    
T  33921562 atactacttttacaactcccaattcaata---tattctactttacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccatttt 33921466  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||| ||||||| | |||||||| | |||||| ||| ||||    
T  33921465 tctctctccttcactaatatatttttcttaataagtgcgaaa 33921424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 34915879 - 34915805
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||   | ||||||||| ||||| |||||    
T  34915879 tatattccactttgcatttatgataatggagaatgcaccaatacttaacgtaaacacttaaaatcatttctctct 34915805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 117120 - 117193
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||| |||||||||  ||||||||||||||||  |||||||||   ||||||||||||||||||    
T  117120 tatattccactttgtatttatgatcatggagaatgcaccaatttttaacaagagtccttaaaaccatttttctc 117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 15081362 - 15081409
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  15081362 gtgtcccaaaataactgaacaatttcacttttcaatacaatattaatt 15081409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 33109414 - 33109525
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| || ||| |||| | ||||||||||||||||| |||| ||||||||  || ||||||| |||||||||| || ||||| |||| |||| | |||    
T  33109414 tatatttcattttacattaacgatagtggagaatgcacaaatatttaacaagtgcatttaaaactatttttctctctcattcatctatacatttttctta 33109513  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  33109514 atacgtgtgaaa 33109525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 15371956 - 15371856
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||| |||||||||||||||||  | ||||||||| ||||||| | |||| |||| |||||||||||    
T  15371956 atactactttcaccactcccaattcaata---tattctactttgcatttatgataaagaagaatgcactaatagttgataaga-cactcaaaaccatttt 15371861  T
Q  240 tctct 244  Q
    |||||    
T  15371860 tctct 15371856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 7359183 - 7359228
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaat 127  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  7359183 tgtcccaaaataactgaaccatttcacttttcaatacaatattaat 7359228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 8569702 - 8569596
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaa 270  Q
    ||||| |||||||||||||||||||||| |||| ||||||||    |||| | ||||||||| ||||||||| | || |||| ||||| |||| ||||||    
T  8569702 atatttcactttgcatttatgatagtggtgaatacaccaata---cacaaaaacacttaaaatcatttttctttctcattcacttatacattt-ttttaa 8569607  T
Q  271 tatgtgtgaaa 281  Q
    || ||||||||    
T  8569606 tacgtgtgaaa 8569596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 117974 - 118032
Alignment:
Q  237 ttttctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttca 296  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| ||||    
T  117974 ttttctctttcattcatttatatattt-ttttaatatgtgtgaaatgaacaaatgattca 118032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 4611325 - 4611403
Alignment:
Q  185 atttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattta 264  Q
    ||||||| || |||| |||||||||||| ||||||| | ||||||||| || |||||||| ||||||||||||| |||||    
T  4611325 atttatgctaatggaaaatgcaccaatacttaacaaaagcacttaaaatca-ttttctctatccttcatttatacattta 4611403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 15321291 - 15321204
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    ||||||| |||||||||||||||||  | |||| |||||||||||| | |||| |||| ||||||| |||||||| || |||| |||||    
T  15321291 tatattctactttgcatttatgataaagaagaacgcaccaatagtttataaga-cactgaaaaccaattttctctctctttcagttata 15321204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 34915968 - 34915921
Alignment:
Q  83 gtctcaaaataactgaactatttcacttttcaatacaatattaatttt 130  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||||    
T  34915968 gtctcaaaataactgagtcatttcacttttcaataaaatattaatttt 34915921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 4552927 - 4552996
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagtta 216  Q
    ||||||||| ||| |||||||||||   ||||| | |||||||||||||||  | ||||||||||||||||||    
T  4552927 tactttcaccactcccaatttaata---tattctaatttgcatttatgataaagaagaatgcaccaatagtta 4552996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 15355616 - 15355689
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||| ||||||||||  | ||||||||||||||||| | |||| |||| ||||||| ||||||||    
T  15355616 tatattctactttggatttatgataaagaagaatgcaccaatagttgataaga-cactcaaaaccaattttctct 15355689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 31265721 - 31265766
Alignment:
Q  83 gtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||| |   |||||||||||||||||||||||||||    
T  31265721 gtctcaaaataacttagtcatttcacttttcaatacaatattaatt 31265766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 3604761 - 3604721
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  3604761 aaaataactgagtcatttcacttttcaatacaatattaatt 3604721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 20383785 - 20383825
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||  |||||||||||| |||||||||||||||    
T  20383785 aaaataactgacttatttcactttttaatacaatattaatt 20383825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 289
Target Start/End: Original strand, 5442358 - 5442500
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  5442358 tactttcacaacttccaattcaata---tattccactttgcatttatgatagtggagaatgcactaatacttaacaagataacttaaaaccatttttctc 5442454  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaa 289  Q
    | || |||||||||| |||| | |||||| |||||||| |||||||    
T  5442455 tctcattcatttatacatttgtcttaataggtgtgaaatgaaaaaa 5442500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 303
Target Start/End: Original strand, 52432330 - 52432486
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||| ||||| ||||   |||| |||||| |||||||| ||||  |||||||| ||||| ||||||||| ||||||||| ||||||||||    
T  52432330 tactttcacaacttacaattcaata---tatttcactttacatttatggtagtaaagaatgcatcaatacttaacaagagcacttaaaatcatttttctc 52432426  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    | | ||||||||||| |||| | ||||| |||||||||||||||||||| ||||||||||    
T  52432427 tcttcttcatttatacatttgtcttaatgtgtgtgaaaagaaaaaatggctcagctaatt 52432486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 32348259 - 32348368
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||| |||||||||| |||  ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||| | |||    
T  32348259 tatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccatttttctctctccttcatttatacatttgtctta 32348358  T
Q  270 atatgtgtga 279  Q
    ||||||||||    
T  32348359 atatgtgtga 32348368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 5040642 - 5040531
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| || |||||||||| |||| | | |    
T  5040642 tatatttcacttcgcatttatgatagtggagaatgcatcaatacttaacaagatcacctaaaaccatttttctctctcattcatttatacatttgtctaa 5040543  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  5040542 atatgtgtgaaa 5040531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 19532986 - 19532876
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||||||||||||||||| ||||||| ||||||||  |||||||||| |||||||||| |||||||||||||||||| |||||    
T  19532986 tatatttcactttacatttatgatagtggagaatgaaccaatacttaacaagtacacttaaaactatttttctctatccttcatttatatattt-tttta 19532888  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  19532887 ataggtgtgaaa 19532876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 46536381 - 46536492
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||| ||||||||||||||||||| || ||||| ||||||||| |||||||||||||||||||||||||||||| |||| |||| | |||    
T  46536381 tatattccactttgtatttatgatagtggagaatacaacaatatttaacaagagcacttaaaaccatttttctctttccttcatctataaatttttctta 46536480  T
Q  270 atatgtgtgaaa 281  Q
    |||  |||||||    
T  46536481 atacatgtgaaa 46536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 45889315 - 45889205
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttcc-ttcatttatatatttatttt 268  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| |||| | ||    
T  45889315 tatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccatttttctctctcctttcatttatacatttgtctt 45889216  T
Q  269 aatatgtgtga 279  Q
    ||||| |||||    
T  45889215 aatatatgtga 45889205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 28839380 - 28839489
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||||||| || ||||||| |||||||||| ||||||||||||| |||| | |||    
T  28839380 tatattccactttgcatttatgatagtggagaatagaccaatacttaacaagagcatttaaaactatttttctctctccttcatttatacatttgtctta 28839479  T
Q  270 atatgtgtga 279  Q
    |||| |||||    
T  28839480 atatatgtga 28839489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 51749250 - 51749141
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||| ||||||||  ||||||| ||||||||| ||||||||| || |||||||| ||||||||||||| |||||| |||    
T  51749250 tatattccactttgcatttatgataatggagaataaaccaatacttaacaagaacacttaaaatcagttttctctctccttcatttatacatttatctta 51749151  T
Q  270 atatgtgtga 279  Q
    |||| |||||    
T  51749150 atatatgtga 51749141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 49944980 - 49945084
Alignment:
Q  177 cactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtg 276  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||| ||||||||||||||||||||| | ||||||||||| |||| | ||||||||||    
T  49944980 cactttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttcttcatttatacatttttcttaatatgtg 49945079  T
Q  277 tgaaa 281  Q
    |||||    
T  49945080 tgaaa 49945084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 42926175 - 42926282
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| || ||||||||||||||||||||||||||||| ||| ||||||| | ||||||||| |||||||||||||| |||||||||| |||| | |||    
T  42926175 tatatttcattttgcatttatgatagtggagaatgcaccgatacttaacaaaaacacttaaaatcatttttctctttcattcatttatacatttttctta 42926274  T
Q  270 atatgtgt 277  Q
    ||||||||    
T  42926275 atatgtgt 42926282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 46496059 - 46496164
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||| |||||||| || ||||  ||||||||| |||| |||||||||||||||  |||||||||||||||||| | |||    
T  46496059 tatattccactttgcatttatgataatggagaatacatcaatccttaacaagaacactcaaaaccatttttctc--tccttcatttatatatttgtctta 46496156  T
Q  270 atatgtgt 277  Q
    ||||||||    
T  46496157 atatgtgt 46496164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 3555622 - 3555519
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||| || | |||||||||||||||||| || ||||||||||||| |||| | |||    
T  3555622 tatattccactttgcatttatgatagtggagaatagaccaatacttaaaaaaagcacttaaaaccatttttccctatccttcatttatacatttgtctta 3555523  T
Q  270 atat 273  Q
    ||||    
T  3555522 atat 3555519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 49494230 - 49494119
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||||||||||||||  ||||||| ||||||||  |||||||||| |||||||||| || |||||||||| |||| | |||    
T  49494230 tatattccactttacatttatgatagtggagaattgaccaatatttaacaagtgcacttaaaactatttttctctctctttcatttatacatttttctta 49494131  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  49494130 atacgtgtgaaa 49494119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 52830481 - 52830370
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||||||   |||| ||||  |||||||||| ||||||||||||| |||| |||||    
T  52830481 tatattccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattatttttctctctccttcatttatacatttttttta 52830382  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  52830381 atacgtgtgaaa 52830370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 8773283 - 8773394
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca-tttttctctttccttcatttatatatttatttt 268  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||| | ||||||||| ||  |||||||||  ||| | ||    
T  8773283 tatattccactttgcatatatgacagtggagaatgcaccaatacttaacaagagcacttaaaactattttttctctctcgatcatttatacgtttttctt 8773382  T
Q  269 aatatgtgtgaa 280  Q
    ||||||||||||    
T  8773383 aatatgtgtgaa 8773394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 32587806 - 32587917
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||||||||||||||| |||| |||||| ||||| ||||||| | |||||||||  ||||||||||  |||||||||||| |||| | |||    
T  32587806 tatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcaccttcatttatacatttttctta 32587905  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  32587906 atatgtgtgaaa 32587917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 36467262 - 36467151
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||| |||||||||||| |||||||| ||||||||  |||||||||| |||||||||| || |||||||||| |||| | |||    
T  36467262 tatatttcactttacatttatcatagtggagaatccaccaatacttaacaagtgcacttaaaactatttttctctctcattcatttatacatttttctta 36467163  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  36467162 atacgtgtgaaa 36467151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 50267505 - 50267394
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||| |||||| ||||||||||| ||||||||||||||||| ||||||||  |||||||||| ||||||||||  | |||||||||| |||| | |||    
T  50267505 tatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctcactttcatttatacatttttctta 50267406  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  50267405 atacgtgtgaaa 50267394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 17342869 - 17342955
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcattta 256  Q
    |||||| ||||||| |||||||||| ||||||||||||||||| ||||||| | |||||||||||||||||| || |||||||||||    
T  17342869 tatatttcactttgtatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttccctctccttcattta 17342955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 8327758 - 8327867
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||| |||||||||||||||| |||||||  ||||||| ||||||||| |||||||||  |||||||||| || |||||||||| |||| | |||    
T  8327758 tatattccattttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaattatttttctctctcattcatttatacatttgtctta 8327857  T
Q  270 atatgtgtga 279  Q
    | ||||||||    
T  8327858 aaatgtgtga 8327867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 17724778 - 17724697
Alignment:
Q  173 attccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatt 254  Q
    |||| |||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||| |||||||||| |||||||||    
T  17724778 attctactttgcatttatggtagtggagaatgcatcaataattaacaagagcacttaaaacaatttttctctctccttcatt 17724697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 21304425 - 21304548
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca--tttttctctttccttcatttatatatttattt 267  Q
    |||||| |||||||||||||||||||| ||||||||||  |||  |||||||||||||||||| ||  ||||||||| |||||| |||||| | || |||    
T  21304425 tatatttcactttgcatttatgatagtcgagaatgcactgatacataacaagatcacttaaaatcatttttttctctctccttcgtttatacaatttttt 21304524  T
Q  268 taatatgtgtgaaaagaaaaaatg 291  Q
    |||||||| ||||| ||| |||||    
T  21304525 taatatgtatgaaatgaacaaatg 21304548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 289
Target Start/End: Original strand, 36784335 - 36784473
Alignment:
Q  147 tttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctcttt 246  Q
    |||||||||||| |||| ||||   |||| ||||||||||||||||||||||| ||||||| |||| ||||||||| ||| ||||| ||| ||||  | |    
T  36784335 tttcacaacttcaaattcaata---tatttcactttgcatttatgatagtggaaaatgcacaaatacttaacaagagcacctaaaatcatatttcattct 36784431  T
Q  247 ccttcatttatatatttattttaatatgtgtgaaaagaaaaaa 289  Q
     |||||||||||||||||  |||||||||| ||||| ||||||    
T  36784432 acttcatttatatatttaccttaatatgtg-gaaaaaaaaaaa 36784473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 6787286 - 6787399
Alignment:
Q  168 agtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattt 267  Q
    ||||||||||||||| |||||||||||||||| |||| || |||| |||||||   || ||||||| |||||||||| || ||| ||||||||||| | |    
T  6787286 agtatattccactttacatttatgatagtggataatgtactaatatttaacaaatacatttaaaactatttttctctctctttcgtttatatatttttct 6787385  T
Q  268 taatatgtgtgaaa 281  Q
    ||||| ||||||||    
T  6787386 taatacgtgtgaaa 6787399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 51848761 - 51848654
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcacca--atagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattt 267  Q
    |||||||||||||  ||||||||||||||||||| |||||  ||| ||||||| | |||||||||| |||||||| | ||| ||||||||| |||||| |    
T  51848761 tatattccactttatatttatgatagtggagaatacaccaatatatttaacaatagcacttaaaactatttttctatctccatcatttatacatttatct 51848662  T
Q  268 taatatgt 275  Q
    ||||||||    
T  51848661 taatatgt 51848654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 34813958 - 34814069
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||||||||||||||| ||   ||||||| |||| ||||||||| |||||||||| |||||||||| ||||||| | ||| |||| | |||    
T  34813958 tatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctctccttcactaatacatttttctta 34814057  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  34814058 ataagtgtgaaa 34814069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 43895888 - 43895998
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| |||||||||||||||||||||||||  |||||||| ||||||| | ||| |||||| | |||||||| || ||||| |||| |||| | |||    
T  43895888 tatattcaactttgcatttatgatagtggagaacacaccaatacttaacaaaaacacataaaacta-ttttctctctctttcatctatacatttttctta 43895986  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  43895987 atatgtgtgaaa 43895998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 46880456 - 46880567
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||||||||||  |||| ||| |||| |||| | || |||| ||||||||||| ||||||||||||| | || | |||    
T  46880456 tatattcaactttacatttatgatagtggagaagacaccgatacttaataagagctctcaaaatcatttttctctctccttcatttatacaattttctta 46880555  T
Q  270 atatgtgtgaaa 281  Q
    ||||||||||||    
T  46880556 atatgtgtgaaa 46880567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 13500792 - 13500687
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttc--tctttccttcatttatatatttattttaat 271  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||| | ||||||||| ||||| ||  ||| || |||||||||| |||| | |||||    
T  13500792 ttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagcacttaaaatcatttctctttctctcattcatttatacatttttcttaat 13500693  T
Q  272 atgtgt 277  Q
    ||||||    
T  13500692 atgtgt 13500687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 27391388 - 27391498
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||| | |  |||| ||||||| |||| |||| ||||||||| ||||||||||| ||||||| ||||| |||| |  ||    
T  27391388 tatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcatttttctctctccttcacttatacatttttcgta 27391487  T
Q  270 atatgtgtgaa 280  Q
    ||| |||||||    
T  27391488 ataagtgtgaa 27391498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 28908144 - 28908241
Alignment:
Q  186 tttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt--tctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||| ||||||||||||||||| |||| |||||||||  |||||||| ||||||  ||||| ||||||||||||| |||| | |||||||||||||||    
T  28908144 tttaagatagtggagaatgcactaatacttaacaagagtacttaaaatcatttttctctctctccttcatttatacatttttcttaatatgtgtgaaa 28908241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 48242657 - 48242564
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatattt 263  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||| ||| ||||  |||||||||| |||||| ||  ||||||||||||| ||||    
T  48242657 tatattccactttacatttatgatagtggaggatgcatcaatacttatcaagtgcacttaaaactatttttatccctccttcatttatacattt 48242564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 26756017 - 26756105
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||| ||||||  |||||||||||||||||||||| ||||| ||||||||  |||||||||| ||||| |||| || ||||||||||    
T  26756017 tatattacactttatatttatgatagtggagaatgcatcaatacttaacaagtgcacttaaaactattttcctctctcattcatttata 26756105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 28277105 - 28276991
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca---tttttctctttccttcatttatatatttatt 266  Q
    |||||| |||||| ||||||||||| ||||||||||||||||| ||||||||  |||||||||| |   ||||| ||| ||||||||||||| |||| |     
T  28277105 tatatttcactttacatttatgatactggagaatgcaccaatacttaacaagtgcacttaaaactattttttttttctctccttcatttatacatttttc 28277006  T
Q  267 ttaatatgtgtgaaa 281  Q
    |||||  ||||||||    
T  28277005 ttaatgcgtgtgaaa 28276991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 7785341 - 7785227
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagt--taacaagatcacttaaaaccatttttctct-ttccttcatttatatatttatt 266  Q
    |||||| |||||| ||||||||||||||||||||||| ||||| |  |||||| | |||||||||| |||||||||| ||  |||||||||| |||| |     
T  7785341 tatatttcactttacatttatgatagtggagaatgcatcaatacttataacaataacacttaaaactatttttctctcttatttcatttatacatttttc 7785242  T
Q  267 ttaatatgtgtgaaa 281  Q
    ||| |||||||||||    
T  7785241 ttagtatgtgtgaaa 7785227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 30749972 - 30750059
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttat 257  Q
    ||||| ||||||||||||||||||||| |||||| || ||||| ||||||| | |||||||||| |||||||||| || || ||||||    
T  30749972 tatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttttctctctcatttatttat 30750059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 30771423 - 30771510
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttat 257  Q
    ||||| ||||||||||||||||||||| |||||| || ||||| ||||||| | |||||||||| |||||||||| || || ||||||    
T  30771423 tatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttttctctctcatttatttat 30771510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 27831891 - 27831961
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||||||||||||||||| ||| ||||||||||||| || |||||  |||||||||| ||||||||||    
T  27831891 ttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctct 27831961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 29756236 - 29756121
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||| |||||||||||||||||  | ||||||||||||||||| | |||  |||| ||| |||||||    
T  29756236 atactactttcaccactcccaattcaata---tattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttt 29756140  T
Q  240 tctctttccttcatttata 258  Q
    ||||| || |||| |||||    
T  29756139 tctctctctttcacttata 29756121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 16040118 - 16040229
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| ||||| |||||||||||  | |||||| ||||||| |||||||   ||||||||||||||||||||| ||||| | | |||||||| | |||    
T  16040118 tatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccatttttctctctccttgactaatatatttttctta 16040217  T
Q  270 atatgtgtgaaa 281  Q
    |||  |||||||    
T  16040218 ataaatgtgaaa 16040229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 17342767 - 17342814
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  17342767 gtgtctcaaaataactgagttatttcacttttcaatacaatattaatt 17342814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 27698861 - 27698956
Alignment:
Q  186 tttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||| |||||||||||||||| |||| |||||| |  |||||||||  |||||| | ||||||||||||||| |||| | |||||| ||||||||    
T  27698861 tttatcatagtggagaatgcactaataattaacatgtgcacttaaaattatttttttatttccttcatttatacatttttcttaatacgtgtgaaa 27698956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 292
Target Start/End: Complemental strand, 4466248 - 4466099
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||  ||||   ||||| ||||| |||||||||||  | |||||| ||||||| |||||||    ||| ||| |||||||    
T  4466248 atactactttcaccacttccaatacaata---tattctactttacatttatgataaagaagaatggaccaatacttaacaaaggtactcaaacccatttt 4466152  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatgg 292  Q
    ||||| || |||| | |||||||| | |||||| |||||||| ||| ||||||    
T  4466151 tctctctcattcactaatatatttttcttaataagtgtgaaatgaacaaatgg 4466099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 7787707 - 7787777
Alignment:
Q  174 ttccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||   ||||||||| |||| |||||    
T  7787707 ttccactttacatttatgatagtggagaatacaccaatacttaacaagtgtacttaaaactatttctctct 7787777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 11425963 - 11425834
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||  ||||   ||||| ||||| |||||||||||  | |||||| ||||||| |||||||   |||| ||||| |||||    
T  11425963 atactactttcactacttccaatacaata---tattctactttacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaactatttt 11425867  T
Q  240 tctctttccttcatttatatatttattttaata 272  Q
    ||||| ||||||| | |||||||| | ||||||    
T  11425866 tctctctccttcactaatatatttttcttaata 11425834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 27932900 - 27932810
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatata 260  Q
    ||||||| |||||||||||||||||  | ||||||||||||||||| |||||  |||| |||  ||||||||||| || |||| |||||||    
T  27932900 tatattctactttgcatttatgataaagaagaatgcaccaatagttgacaaggacactcaaacgcatttttctctctctttcacttatata 27932810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 2571404 - 2571522
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatt-tt 268  Q
    ||||||| |||||||||||| ||||    | |||||||||||| ||||||||| |||| ||||| ||||| |||| || |||||||||| |||| || ||    
T  2571404 tatattctactttgcatttaggataagaaataatgcaccaatacttaacaaga-cactcaaaactatttt-ctctctctttcatttatacattttttctt 2571501  T
Q  269 aatatgtgtgaaaagaaaaaa 289  Q
    |||||||||||||| ||||||    
T  2571502 aatatgtgtgaaaataaaaaa 2571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 273
Target Start/End: Complemental strand, 10370244 - 10370148
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacca-tttttctctttccttcatttatatatttattttaatat 273  Q
    |||||||||||||||| ||| ||||||||  |||| ||||||| | |||||||||| | ||||||||| ||||| ||||||| |||| | |||||||    
T  10370244 actttgcatttatgatggtgaagaatgcattaatacttaacaaaagcacttaaaactattttttctctctcctttatttatacatttttcttaatat 10370148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 40754507 - 40754437
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatag 213  Q
    |||||||||||||||||  ||||||||||   ||||| |||||||||||||||||  | |||||||||||||||    
T  40754507 atactactttcacaactctcaatttaata---tattctactttgcatttatgataaagaagaatgcaccaatag 40754437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 46536279 - 46536326
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||    
T  46536279 gtgtctcaaaataactgagtcatttcacttttcaatacaatattaatt 46536326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 948654 - 948620
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatg 204  Q
    |||||||||||||||||||||||||||||||||||    
T  948654 tatattccactttgcatttatgatagtggagaatg 948620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 2219615 - 2219569
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||||    
T  2219615 tgtcccaaaataattgaaccatttcacttttcaatacaatattaatt 2219569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 34877157 - 34877087
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccattttt 240  Q
    ||||||| ||||||||||||||||| | || ||||||| |||| ||||| ||| |||||||||| ||||||    
T  34877157 tatattcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcacttaaaacaattttt 34877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 28706676 - 28706579
Alignment:
Q  184 catttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    |||||||||||  | | |||||| ||||| || ||||   |||| |||||||||||||||| |  |||||||||| |||| |||||||||||||||||    
T  28706676 catttatgataaagaaaaatgcatcaatacttgacaaaggcactcaaaaccatttttctctcttattcatttatacattttttttaatatgtgtgaaa 28706579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 29225502 - 29225402
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||| ||||   ||||| ||||| |||||||||||    |||||||||||||| |||||||   |||| |||| ||||||    
T  29225502 atactactttcaccacttccaattcaata---tattctactttccatttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttt 29225406  T
Q  240 tctc 243  Q
    ||||    
T  29225405 tctc 29225402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 10370349 - 10370309
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  10370349 aaaataactgagctatttcactttccaatacaatattaatt 10370309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 30903294 - 30903242
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaaga 222  Q
    ||||||| ||||||||||||||||| |||| ||||||| |||| |||||||||    
T  30903294 tatattctactttgcatttatgataatggaaaatgcacaaatacttaacaaga 30903242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 37541207 - 37541092
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| |||||||||| ||||   ||||| ||||| ||||||| |||  | ||||||||||||||||| | ||   || | |||||||||||    
T  37541207 atactactttcaccacttccaattcaata---tattctactttacatttataataaagaagaatgcaccaatagttgataaagacattcaaaaccatttt 37541111  T
Q  240 tctctttccttcatttata 258  Q
    ||||| || |||| |||||    
T  37541110 tctctctctttcacttata 37541092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 40061850 - 40061962
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||| | ||||||||||||||| || | |||| | ||||| || | |||| || |||||| ||||||||||| | ||||  ||||| |||| |||||    
T  40061850 tatattctaatttgcatttatgataatgaaaaatgtaacaatacttgataagaacatttaaaatcatttttctctcttcttcgcttatacatttctttta 40061949  T
Q  270 atatgtgtgaaaa 282  Q
    ||| |||||||||    
T  40061950 ataagtgtgaaaa 40061962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 3718908 - 3718806
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgt 277  Q
    ||||| ||||||||||| ||   ||||||| |||| || |||||| |||||||||| |||||||||| | ||||||| ||| |||| | |||||| ||||    
T  3718908 actttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctct-cttcattaatacatttttcttaataagtgt 3718810  T
Q  278 gaaa 281  Q
    ||||    
T  3718809 gaaa 3718806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 8773177 - 8773224
Alignment:
Q  81 gtgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||| |||||||||||| |||||||| ||||||||| ||||||||||    
T  8773177 gtgtcccaaaataactgagctatttcatttttcaatagaatattaatt 8773224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 5442282 - 5442316
Alignment:
Q  83 gtctcaaaataactgaactatttcacttttcaata 117  Q
    |||||||||||||||| ||||||||||||||||||    
T  5442282 gtctcaaaataactgagctatttcacttttcaata 5442316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 24131494 - 24131393
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    ||||||||||||| ||| |||||| ||||   ||||  |||||||||||||||||  | |||||||||| |||||| | |||  || | |||||||||||    
T  24131494 atactactttcaccactcccaattcaata---tattatactttgcatttatgataaagaagaatgcacctatagttgataagggcattcaaaaccatttt 24131398  T
Q  240 tctct 244  Q
    |||||    
T  24131397 tctct 24131393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 26583668 - 26583714
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||| || ||| | |||||||||||||||||||||||||||    
T  26583668 tgtctcaaaaaaattgacccatttcacttttcaatacaatattaatt 26583714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 31798459 - 31798533
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||||||||||||||  | | ||||||||||||||| | |||  |||| |||||||| |||||||    
T  31798459 tatattctactttgcatttatgataaagaataatgcaccaatagttgataagggcactcaaaaccatatttctct 31798533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 33149314 - 33149388
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||||||||||||||  | ||||| |||||||| |||| |||  |||| ||| ||||||||||||    
T  33149314 tatattctactttgcatttatgataaagaagaatccaccaataattaataaggacactcaaatccatttttctct 33149388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 36784258 - 36784300
Alignment:
Q  86 tcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||   |||||||||||||||||||||||||||    
T  36784258 tcaaaataactgagtcatttcacttttcaatacaatattaatt 36784300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 37925313 - 37925239
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||||||||||||||  | | |||||||||||| || | |||| |||| |||| |||||||||||    
T  37925313 tatattctactttgcatttatgataaagaaaaatgcaccaataattgataagagcactaaaaatcatttttctct 37925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 43895787 - 43895833
Alignment:
Q  82 tgtctcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||    
T  43895787 tgtctcaaaataaatgagtcatttcacttttcaatacaatattaatt 43895833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 6784948 - 6784989
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||| ||||  |||||||||||||||||||||||||||    
T  6784948 caaaataattgaatcatttcacttttcaatacaatattaatt 6784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 11324305 - 11324383
Alignment:
Q  199 agaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||| |||||||| |||||||  | || |||||||||| |||||| || |||||||||| |||| | |||||||||||||    
T  11324305 agaatacaccaatatttaacaa--ttacataaaaccattattctctctcattcatttatacatttttcttaatatgtgtga 11324383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 11482326 - 11482404
Alignment:
Q  199 agaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtga 279  Q
    ||||| |||||||| |||||||  | || |||||||||| |||||| || |||||||||| |||| | |||||||||||||    
T  11482326 agaatacaccaatatttaacaa--ttacataaaaccattattctctctcattcatttatacatttttcttaatatgtgtga 11482404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 14358169 - 14358128
Alignment:
Q  87 caaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||| ||| | |||||||||||||||||||||||||||    
T  14358169 caaaataaatgatcaatttcacttttcaatacaatattaatt 14358128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 38664442 - 38664530
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaacc-atttttctctttccttcatttata 258  Q
    ||||||| | ||||||||||||||||| |||||||||||  || ||||||| | || ||||||||  ||||||||| ||||| |||||||    
T  38664442 tatattcaattttgcatttatgatagtagagaatgcaccggtacttaacaaaaaca-ttaaaacctttttttctctctcctttatttata 38664530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 3160746 - 3160682
Alignment:
Q  178 actttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttct 242  Q
    |||||||||||||||||  | | ||||||||||||||| |||||  |||| ||| ||||||||||    
T  3160746 actttgcatttatgataaagaataatgcaccaatagttgacaagggcactcaaacccatttttct 3160682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 15290448 - 15290476
Alignment:
Q  100 ctatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||||||||||||||||||    
T  15290448 ctatttcacttttcaatacaatattaatt 15290476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 34877251 - 34877211
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||||||||  |||| ||||||||||||||||||||||    
T  34877251 aaaataactgaatcattttacttttcaatacaatattaatt 34877211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 51049455 - 51049495
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    ||||||| ||| ||||||||||||| |||||||||||||||    
T  51049455 aaaataattgagctatttcactttttaatacaatattaatt 51049495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 52830575 - 52830535
Alignment:
Q  88 aaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  52830575 aaaataactgagtcatttcacttttcaatacaatattaatt 52830535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 140 - 289
Target Start/End: Original strand, 229837 - 229982
Alignment:
Q  140 atactactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttt 239  Q
    |||||||||||||||||||||||| ||||   ||| ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||    
T  229837 atactactttcacaacttccaattcaata---tataccactttgcatttatgataatggagaatgcaccaatacttaacaagagcacttaaaa-catttt 229932  T
Q  240 tctctttccttcatttatatatttattttaatatgtgtgaaaagaaaaaa 289  Q
    ||| | ||||||||||||| |||| | |||||| ||||||||||||||||    
T  229933 tctatctccttcatttatacatttgtcttaatacgtgtgaaaagaaaaaa 229982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 98866 - 98998
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    |||||||||||||  |||||| || ||||| |||||||||||| ||| ||||| ||||||||| ||||||||||| || |||||||||| |||| | |||    
T  98866 tatattccactttatatttattatggtggataatgcaccaatacttatcaagagcacttaaaatcatttttctctctcattcatttatacatttttctta 98965  T
Q  270 atatgtgtgaaaagaaaaaatggttcagctaat 302  Q
    |||||||||||| ||| ||||||||||| ||||    
T  98966 atatgtgtgaaatgaacaaatggttcagttaat 98998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 303
Target Start/End: Original strand, 230274 - 230429
Alignment:
Q  144 tactttcacaacttccaatttaatagtatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctc 243  Q
    |||||||||||||||||||| ||||   ||||||| |||||||||||||||   ||||||| ||| ||  |||||||||  |||||||||||||||||||    
T  230274 tactttcacaacttccaattcaata---tattccattttgcatttatgataacagagaatgtacccatgcttaacaagaatacttaaaaccatttttctc 230370  T
Q  244 tttccttcatttatatatttattttaatatgtgtgaaaagaaaaaatggttcagctaatt 303  Q
    | | ||||||||||| | || | ||||||| ||||||| |||||| ||||||||||||||    
T  230371 tcttcttcatttataca-ttgtcttaatatatgtgaaatgaaaaattggttcagctaatt 230429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 230201 - 230243
Alignment:
Q  86 tcaaaataactgaactatttcacttttcaatacaatattaatt 128  Q
    |||||||||||||   |||||||||||||||||||||||||||    
T  230201 tcaaaataactgagtcatttcacttttcaatacaatattaatt 230243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 9617 - 9530
Alignment:
Q  171 atattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttata 258  Q
    |||||||||||||||||||||||| |||||||| ||  |||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  9617 atattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccatttttctctctccttcatttata 9530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 14497 - 14608
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| ||| ||||  || ||||||| |||||| |||  |||||||||||| |||| | |||    
T  14497 tatattccactttacatttatgacagtggagaatgcatcaatacttagcaagtgcaattaaaactatttttatctccccttcatttatacatttttctta 14596  T
Q  270 atatgtgtgaaa 281  Q
    ||| ||||||||    
T  14597 atacgtgtgaaa 14608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 275
Target Start/End: Original strand, 26654 - 26752
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctctttccttcatttatatatttatttta 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||| ||| |       ||||||||||||| ||||||||||||| |||| | |||    
T  26654 tatattccactttgcatttatgatagtggagaatagaccaatacttaaccagagc-------accatttttctctctccttcatttatacatttgtctta 26746  T

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Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 8928 - 8970
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaata 212  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  8928 tatattccactttgcatttataatagtggagaatgcaccaata 8970  T

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Target: scaffold0227 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 8951 - 9018
Alignment:
Q  214 ttaacaagatcacttaaaaccatttttctctttccttcatttatatatttattttaatatgtgtgaaa 281  Q
    ||||||| | |||||||||  |||||||||| | ||||||||||| |||| | |||||||||||||||    
T  8951 ttaacaaaaacacttaaaattatttttctctcttcttcatttatacatttttcttaatatgtgtgaaa 9018  T

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Target: scaffold0576 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 606 - 679
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| |||||| ||||||||||  | ||||||||||||||||| | |||| |||| ||||||| ||||||||    
T  606 tatattctactttggatttatgataaagaagaatgcaccaatagttgataaga-cactcaaaaccaattttctct 679  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 26363 - 26405
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaata 212  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||    
T  26363 tatattccactttacatttatgatagtggataatgcactaata 26405  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 171267 - 171341
Alignment:
Q  170 tatattccactttgcatttatgatagtggagaatgcaccaatagttaacaagatcacttaaaaccatttttctct 244  Q
    ||||||| ||||| ||||||||||| |||  || ||||||||| || |||||| || |||||||| |||||||||    
T  171267 tatattctactttacatttatgataatggtaaacgcaccaatacttgacaagaacatttaaaaccttttttctct 171341  T

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