View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2205_low_11 (Length: 314)

Name: NF2205_low_11
Description: NF2205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2205_low_11
NF2205_low_11
[»] chr5 (20 HSPs)
chr5 (148-302)||(25484910-25485064)
chr5 (67-113)||(28446205-28446251)
chr5 (67-113)||(6130321-6130367)
chr5 (67-112)||(40276086-40276131)
chr5 (67-110)||(36798377-36798420)
chr5 (67-113)||(3333758-3333804)
chr5 (67-112)||(19340828-19340873)
chr5 (67-112)||(30603680-30603725)
chr5 (21-52)||(25484503-25484534)
chr5 (67-113)||(2974834-2974880)
chr5 (67-113)||(9852986-9853032)
chr5 (67-113)||(12406108-12406153)
chr5 (67-101)||(16132930-16132964)
chr5 (67-101)||(32391797-32391831)
chr5 (67-112)||(21066541-21066586)
chr5 (68-101)||(22300814-22300847)
chr5 (72-113)||(31080686-31080727)
chr5 (67-112)||(37897785-37897830)
chr5 (67-111)||(2974702-2974746)
chr5 (65-93)||(3999172-3999200)
[»] chr2 (19 HSPs)
chr2 (66-113)||(35718856-35718903)
chr2 (67-113)||(6510201-6510247)
chr2 (67-113)||(34679294-34679340)
chr2 (67-113)||(4576610-4576656)
chr2 (67-113)||(6592935-6592981)
chr2 (67-113)||(15023040-15023086)
chr2 (67-109)||(34100811-34100853)
chr2 (67-113)||(39918643-39918689)
chr2 (67-112)||(32969726-32969771)
chr2 (69-113)||(35718712-35718756)
chr2 (66-101)||(4925647-4925682)
chr2 (67-113)||(5470394-5470440)
chr2 (67-113)||(19206207-19206253)
chr2 (67-101)||(31827734-31827768)
chr2 (67-113)||(34761061-34761107)
chr2 (67-113)||(36195657-36195702)
chr2 (67-113)||(37431739-37431785)
chr2 (67-113)||(43028995-43029041)
chr2 (67-113)||(44297628-44297674)
[»] chr4 (22 HSPs)
chr4 (67-113)||(23759627-23759673)
chr4 (67-112)||(53924814-53924859)
chr4 (67-113)||(6614912-6614958)
chr4 (70-109)||(21597472-21597511)
chr4 (67-113)||(2654021-2654067)
chr4 (71-113)||(10059750-10059792)
chr4 (67-113)||(16292469-16292515)
chr4 (67-109)||(18937311-18937353)
chr4 (67-113)||(21597603-21597649)
chr4 (67-113)||(14060821-14060867)
chr4 (67-101)||(20737435-20737469)
chr4 (67-113)||(21957668-21957714)
chr4 (67-113)||(27978900-27978946)
chr4 (71-113)||(29697727-29697769)
chr4 (67-113)||(35393870-35393916)
chr4 (68-113)||(2837102-2837147)
chr4 (67-112)||(6637133-6637178)
chr4 (68-113)||(10059899-10059944)
chr4 (68-113)||(21871447-21871491)
chr4 (68-113)||(21927308-21927352)
chr4 (69-113)||(1420601-1420645)
chr4 (72-112)||(34771338-34771378)
[»] chr1 (22 HSPs)
chr1 (72-113)||(16545766-16545807)
chr1 (67-112)||(1096650-1096695)
chr1 (68-113)||(3377714-3377759)
chr1 (67-113)||(8301546-8301592)
chr1 (71-113)||(14979006-14979048)
chr1 (67-113)||(17692887-17692933)
chr1 (67-113)||(23891726-23891772)
chr1 (67-113)||(30849287-30849333)
chr1 (70-113)||(12961049-12961092)
chr1 (69-112)||(48319609-48319652)
chr1 (74-113)||(50401580-50401619)
chr1 (66-112)||(6320631-6320677)
chr1 (67-113)||(12960912-12960958)
chr1 (67-113)||(15659047-15659093)
chr1 (67-113)||(17760891-17760937)
chr1 (71-113)||(23220767-23220809)
chr1 (67-113)||(39642267-39642313)
chr1 (67-113)||(41997706-41997752)
chr1 (67-112)||(6569594-6569639)
chr1 (67-148)||(39642409-39642491)
chr1 (67-112)||(45739137-45739182)
chr1 (69-113)||(7579866-7579909)
[»] chr7 (16 HSPs)
chr7 (69-113)||(36580340-36580384)
chr7 (68-113)||(8074076-8074121)
chr7 (69-113)||(3247377-3247421)
chr7 (65-113)||(15029258-15029306)
chr7 (70-113)||(23746093-23746136)
chr7 (67-113)||(4049923-4049969)
chr7 (71-113)||(5172729-5172771)
chr7 (67-113)||(15348158-15348204)
chr7 (67-113)||(20185118-20185164)
chr7 (67-113)||(28472580-28472625)
chr7 (67-112)||(17876359-17876404)
chr7 (67-110)||(35250321-35250364)
chr7 (68-113)||(28785824-28785869)
chr7 (68-113)||(40872233-40872278)
chr7 (69-113)||(18186506-18186550)
chr7 (69-109)||(18504444-18504484)
[»] scaffold0062 (1 HSPs)
scaffold0062 (67-113)||(46143-46189)
[»] chr6 (15 HSPs)
chr6 (71-113)||(2853494-2853536)
chr6 (67-113)||(33401256-33401302)
chr6 (67-112)||(2840857-2840902)
chr6 (67-113)||(238994-239040)
chr6 (67-113)||(3579661-3579707)
chr6 (67-113)||(12766416-12766462)
chr6 (67-113)||(28011327-28011373)
chr6 (72-109)||(26601666-26601703)
chr6 (67-113)||(1377409-1377455)
chr6 (67-113)||(1385157-1385203)
chr6 (67-113)||(10727257-10727303)
chr6 (67-113)||(10727395-10727441)
chr6 (67-97)||(11351845-11351875)
chr6 (67-113)||(17248843-17248888)
chr6 (68-109)||(3812949-3812990)
[»] chr3 (26 HSPs)
chr3 (67-113)||(44436455-44436501)
chr3 (67-113)||(44585854-44585900)
chr3 (67-112)||(51315562-51315607)
chr3 (67-113)||(15978893-15978939)
chr3 (67-113)||(25154382-25154428)
chr3 (67-113)||(38958046-38958092)
chr3 (67-113)||(46226891-46226937)
chr3 (67-109)||(54719061-54719103)
chr3 (67-112)||(4474271-4474316)
chr3 (67-112)||(8024842-8024887)
chr3 (69-113)||(12759575-12759618)
chr3 (67-110)||(3192983-3193026)
chr3 (67-113)||(17773237-17773282)
chr3 (67-113)||(19074538-19074583)
chr3 (67-113)||(19404463-19404509)
chr3 (67-101)||(25902480-25902514)
chr3 (71-113)||(28204544-28204586)
chr3 (67-113)||(28712663-28712709)
chr3 (67-113)||(28944167-28944213)
chr3 (67-113)||(44436599-44436645)
chr3 (67-113)||(51315685-51315731)
chr3 (67-113)||(54464364-54464410)
chr3 (71-112)||(86768-86809)
chr3 (68-109)||(47189667-47189708)
chr3 (65-113)||(3192839-3192887)
chr3 (66-110)||(14992691-14992735)
[»] chr8 (14 HSPs)
chr8 (69-113)||(41487267-41487311)
chr8 (67-113)||(30539192-30539238)
chr8 (67-113)||(41487411-41487457)
chr8 (67-111)||(17070975-17071019)
chr8 (67-111)||(17577253-17577297)
chr8 (70-113)||(22192502-22192545)
chr8 (67-113)||(29657770-29657816)
chr8 (67-113)||(30539055-30539101)
chr8 (67-113)||(37813292-37813338)
chr8 (67-112)||(20853580-20853625)
chr8 (67-100)||(37263441-37263474)
chr8 (67-103)||(14880412-14880448)
chr8 (71-103)||(37535862-37535894)
chr8 (72-112)||(45457197-45457237)
[»] scaffold0137 (1 HSPs)
scaffold0137 (67-113)||(20121-20167)
[»] scaffold0067 (1 HSPs)
scaffold0067 (72-113)||(4220-4261)
[»] scaffold0016 (1 HSPs)
scaffold0016 (68-113)||(203255-203300)
[»] scaffold0015 (1 HSPs)
scaffold0015 (68-113)||(77063-77108)
[»] scaffold0250 (1 HSPs)
scaffold0250 (73-109)||(3644-3680)
[»] scaffold0025 (1 HSPs)
scaffold0025 (69-113)||(19106-19150)
[»] scaffold0809 (1 HSPs)
scaffold0809 (70-113)||(2819-2862)
[»] scaffold0041 (1 HSPs)
scaffold0041 (68-113)||(94004-94049)


Alignment Details
Target: chr5 (Bit Score: 119; Significance: 8e-61; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 148 - 302
Target Start/End: Original strand, 25484910 - 25485064
Alignment:
Q  148 ttcttaatatgtctccactaaatatttttccatgcaatatcaaagtcttattgcaacttttgatcctgcgagaatcccattatttgtcgaagaaacgttg 247  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||  || ||||||||||| |||||| |||||||| |||    
T  25484910 ttcttaatatgtctccactaaacaattctccatgcaatatcaaagtcttattgcaacttttgattatgtgagaatcccatcatttgttgaagaaacattg 25485009  T
Q  248 caaaatataaattgagttggagttataaattatgaaatgaaagcacttgaatatt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25485010 caaaatataaattgagttggagttataaattatgaaatgaaagcacttgaatatt 25485064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 28446205 - 28446251
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  28446205 ggggccaaaactgctacagttgcaaaacttaggggacggttttgtag 28446251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 6130367 - 6130321
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  6130367 ggggccaaaactgctacagttgcaaaacttaggggatggttttgtag 6130321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 40276131 - 40276086
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  40276131 ggggccaaaactgctacagttgcaaaacttaggggacgattttgta 40276086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 36798377 - 36798420
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttg 110  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  36798377 ggggccaaaactgctacagttgcaaaacttagggggcggttttg 36798420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 3333804 - 3333758
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||    
T  3333804 ggggccaaaactgctacatttgcaaaacttagaggacggttttgtag 3333758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 19340873 - 19340828
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||    
T  19340873 ggggccaaaactgctacagttgcaaaacttagggggcgattttgta 19340828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 30603725 - 30603680
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||    
T  30603725 ggggccaaaactgctacagttgcaaaacttagggggcagttttgta 30603680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 52
Target Start/End: Original strand, 25484503 - 25484534
Alignment:
Q  21 cacgtgtcataatatctataaaacacttgtct 52  Q
    ||||||||||||||||||||||||||||||||    
T  25484503 cacgtgtcataatatctataaaacacttgtct 25484534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 2974834 - 2974880
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||| ||||||| ||||||| ||||| |||||    
T  2974834 ggggccaaaactgctacaggtgcaaaacttagggggcggttctgtag 2974880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 9852986 - 9853032
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||| ||||||||||||| ||||||| |||||| ||||    
T  9852986 ggggccaaaactgatacagttgcaaaacttagggggcggtttagtag 9853032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 12406153 - 12406108
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  12406153 ggggccaaaactg-tacagttgcaaaacttagggggcggttttgtag 12406108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 16132930 - 16132964
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttagggg 101  Q
    |||||||||||||||||||| ||||||||||||||    
T  16132930 ggggccaaaactgctacagtggcaaaatttagggg 16132964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 32391831 - 32391797
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttagggg 101  Q
    ||||||||||||||||||||||||||| |||||||    
T  32391831 ggggccaaaactgctacagttgcaaaacttagggg 32391797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 21066541 - 21066586
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| ||| ||  ||||||||||    
T  21066541 ggggccaaaactgctacagttgcaaaacttaaggagcggttttgta 21066586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 22300814 - 22300847
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttagggg 101  Q
    |||||||||||||||||||||||||| |||||||    
T  22300814 gggccaaaactgctacagttgcaaaacttagggg 22300847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 31080686 - 31080727
Alignment:
Q  72 caaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  31080686 caaaactgctacagttgcaaaacttagagggcggttttgtag 31080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 37897830 - 37897785
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||| |||||| |||||||| ||||||| ||||||||||    
T  37897830 ggggccaaaacagctacaattgcaaaacttagggggcggttttgta 37897785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 2974746 - 2974702
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgt 111  Q
    |||||||||||||| |||| ||||||| ||||||| |||||||||    
T  2974746 ggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 3999200 - 3999172
Alignment:
Q  65 gaggggccaaaactgctacagttgcaaaa 93  Q
    |||||||||||||||||||||||||||||    
T  3999200 gaggggccaaaactgctacagttgcaaaa 3999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 35718856 - 35718903
Alignment:
Q  66 aggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  35718856 aggggccaaaactgctacagttgcaaaacttaggggacggttttgtag 35718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 6510201 - 6510247
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  6510201 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 6510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 34679294 - 34679340
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34679294 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 34679340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 4576656 - 4576610
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  4576656 ggggccaaaactgctacagttgcaaaacttatgggacgattttgtag 4576610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 6592935 - 6592981
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||    
T  6592935 ggggccaaaactgctacagttgcaaaacttagggggcagttttgtag 6592981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 15023040 - 15023086
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||    
T  15023040 ggggccaaaattgctacagttacaaaacttaggggacggttttgtag 15023086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 34100853 - 34100811
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    |||| |||||||||||||||||||||| |||||||||||||||    
T  34100853 ggggtcaaaactgctacagttgcaaaacttaggggacggtttt 34100811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 39918643 - 39918689
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  39918643 ggggccaaaattgctacagttgcaaaacttagggggcggttttgtag 39918689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 32969726 - 32969771
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  32969726 ggggccaaaactgctactgttgcaaaacttagggggcggttttgta 32969771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 35718756 - 35718712
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||    
T  35718756 ggccaaaactgccacagatgcaaaatgtaggggacggttttgtag 35718712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 4925647 - 4925682
Alignment:
Q  66 aggggccaaaactgctacagttgcaaaatttagggg 101  Q
    |||||||||||||||||||||||||||| |||||||    
T  4925647 aggggccaaaactgctacagttgcaaaacttagggg 4925682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 5470440 - 5470394
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| |||||||| ||||||| | |||||||||    
T  5470440 ggggccaaaactgctacaattgcaaaacttagggggcagttttgtag 5470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 19206253 - 19206207
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||| |||| |||||||  ||||||||||    
T  19206253 ggggccaaaactgctacagttgtaaaacttagggggtggttttgtag 19206207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 31827734 - 31827768
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttagggg 101  Q
    ||||||||||||||||||||||||||| |||||||    
T  31827734 ggggccaaaactgctacagttgcaaaacttagggg 31827768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 34761061 - 34761107
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| |||||||| ||||| | |||||||||||    
T  34761061 ggggccaaaactgctacaattgcaaaacttaggtggcggttttgtag 34761107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 36195702 - 36195657
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  36195702 ggggccaaaactgctacagttgc-aaacttagggggcggttttgtag 36195657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 37431739 - 37431785
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||| |||||||||||||||| ||| ||| |||||||||||    
T  37431739 ggggccaaaaatgctacagttgcaaaacttaaggggcggttttgtag 37431785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 43028995 - 43029041
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| ||| |||| ||||||| |||||||||||    
T  43028995 ggggccaaaactgctacaattgtaaaacttagggggcggttttgtag 43029041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 44297674 - 44297628
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||| ||||| ||||||| | |||||||||    
T  44297674 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 44297628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 23759673 - 23759627
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  23759673 ggggccaaaactactacagttgcaaaatttaggggacggttttgtag 23759627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 53924859 - 53924814
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  53924859 ggggccaaaactgctacagttgcaaaacttaggggacggttttgta 53924814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 6614958 - 6614912
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  6614958 ggggccaaaactgctacagttgcaaaacttaggggatggttttgtag 6614912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 21597511 - 21597472
Alignment:
Q  70 gccaaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  21597511 gccaaaactgctacagttgcaaaacttaggggacggtttt 21597472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 2654067 - 2654021
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||    
T  2654067 ggggccaaaactgctacagttgcaaaacttaggagatggttttgtag 2654021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 10059792 - 10059750
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  10059792 ccaaaactgctacagttgcaaaacttagggggcggttttgtag 10059750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 16292469 - 16292515
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||    
T  16292469 ggggccaaaactactacagttgcaaaacttaggggacgattttgtag 16292515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 18937353 - 18937311
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  18937353 ggggccaaaactgctacagttgcaaaacttaggggacgatttt 18937311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 21597603 - 21597649
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||    
T  21597603 ggggccaaaactgccacatatgcaaaatttaggggacggttttgtag 21597649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 14060867 - 14060821
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||| |||||||||  ||||||| |||||||||||    
T  14060867 ggggccaaaactgctatagttgcaaagcttagggggcggttttgtag 14060821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 20737435 - 20737469
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttagggg 101  Q
    |||||||||||||||| ||||||||||||||||||    
T  20737435 ggggccaaaactgctatagttgcaaaatttagggg 20737469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 21957668 - 21957714
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||| |||||||||||||||||||||| ||||| | |||||||||||    
T  21957668 ggggtcaaaactgctacagttgcaaaacttaggaggcggttttgtag 21957714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 27978900 - 27978946
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||| ||||||||||| ||||| |||| |||||||||||||||||||    
T  27978900 ggggtcaaaactgctagagttgtaaaacttaggggacggttttgtag 27978946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 29697727 - 29697769
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  29697727 ccaaaactactacagttgcaaaacttaggggacgggtttgtag 29697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 35393870 - 35393916
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||| |||||  |||||| |||||||||||    
T  35393870 ggggccaaaactgctacagttacaaaacctagggggcggttttgtag 35393916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 2837102 - 2837147
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||| ||| |||| ||||||| |||||||||||    
T  2837102 gggccaaaactgctacaattgtaaaacttagggggcggttttgtag 2837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 6637178 - 6637133
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    |||| |||||| ||||||||||||||| ||| ||||||||||||||    
T  6637178 ggggtcaaaaccgctacagttgcaaaacttaagggacggttttgta 6637133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 10059899 - 10059944
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  10059899 gggccaaaactgccacagatgcaaaacttagggggcggttttgtag 10059944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 21871491 - 21871447
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||    
T  21871491 gggccaaaactgctacagttgcaaaactta-gggacagttttgtag 21871447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 21927352 - 21927308
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||    
T  21927352 gggccaaaactgctacagttgcaaaactta-gggacagttttgtag 21927308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 1420645 - 1420601
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||| || |||||||||| ||||||| |||||||||||    
T  1420645 ggccaaaactgatatagttgcaaaacttagggggcggttttgtag 1420601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 34771378 - 34771338
Alignment:
Q  72 caaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    |||||||||||||||||||||| ||||| ||| ||||||||    
T  34771378 caaaactgctacagttgcaaaacttaggagacagttttgta 34771338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 16545766 - 16545807
Alignment:
Q  72 caaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16545766 caaaactgctacagttgcaaaatttaggggacggttttgtag 16545807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 1096650 - 1096695
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  1096650 ggggccaaaactgctacagttgcaaagcttaggggacggttttgta 1096695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 3377714 - 3377759
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||    
T  3377714 gggccaaaactgctaaagttgcaaaacttaggggacggttttgtag 3377759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 8301546 - 8301592
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||    
T  8301546 ggggtcaaaactgccacagatgcaaaatttaggggacggttttgtag 8301592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 14979006 - 14979048
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  14979006 ccaaaactactacagttgcaaaatttagggggcggttttgtag 14979048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 17692887 - 17692933
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||    
T  17692887 ggggccaaaacttctacaattgcaaaacttaggggacggttttgtag 17692933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 23891772 - 23891726
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  23891772 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 23891726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 30849333 - 30849287
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  30849333 ggggtcaaaactgctatagttgcaaaatttagaggacggttttgtag 30849287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 12961049 - 12961092
Alignment:
Q  70 gccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||    
T  12961049 gccaaaactgccacagttgcaaaatttaggggacaattttgtag 12961092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 48319609 - 48319652
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||    
T  48319609 ggccaaaactgctacagttgcaaaacttagggggcggctttgta 48319652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 50401580 - 50401619
Alignment:
Q  74 aaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  50401580 aaactgctacagttgcaaaacttagaggacggttttgtag 50401619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 6320677 - 6320631
Alignment:
Q  66 aggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||| ||||||| | |||| ||||||||||||||||||||||||||    
T  6320677 aggggtcaaaactaccacagatgcaaaatttaggggacggttttgta 6320631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 12960958 - 12960912
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||| |||||||||| ||||| | |||||||||||    
T  12960958 ggggccaaaactgctatagttgcaaaacttaggaggcggttttgtag 12960912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 15659093 - 15659047
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| |||||    
T  15659093 ggggccaaaactgctccagttgcaaaacttagggggcggttgtgtag 15659047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 17760891 - 17760937
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||||    
T  17760891 ggggccaaaactgctacaattgcaaaacttaaggggcggttttgtag 17760937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 23220767 - 23220809
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| |||| ||||||| |||||||||||    
T  23220767 ccaaaactgctacagttgtaaaacttagggggcggttttgtag 23220809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 39642313 - 39642267
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||    
T  39642313 ggggccaaaactgctacaattgcagaacttagggggcggttttgtag 39642267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 41997752 - 41997706
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||| | | |||||||||||    
T  41997752 ggggccaaaactgctacagttgcaaaacttatgaggcggttttgtag 41997706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 6569639 - 6569594
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    |||||||||||||||||| |||||||||||  ||| ||||||||||    
T  6569639 ggggccaaaactgctacaattgcaaaattttaggggcggttttgta 6569594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 39642409 - 39642491
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtagnnnnnnncttagggggc-aaaactgttattaagcct 148  Q
    |||||||||||||| |||  ||||||| ||||||| |||||||||||       |||||||||| ||||||| ||||||||||    
T  39642409 ggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttttcttagggggctaaaactgctattaagcct 39642491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 45739137 - 45739182
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| ||| ||| | ||||||||    
T  45739137 ggggccaaaactgctacagttgcaaaacttatggggcagttttgta 45739182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 7579866 - 7579909
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||    
T  7579866 ggccaaaactactacaattgcaaaatttagggg-cggttttgtag 7579909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 36580384 - 36580340
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  36580384 ggccaaaactgctacagttgcaaaacttaggggacggttttgtag 36580340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 8074076 - 8074121
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||||||| || ||||||||||||||||    
T  8074076 gggccaaaactgctacagttgcaaaactttggggacggttttgtag 8074121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 3247377 - 3247421
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||||||| | |||||||||||    
T  3247377 ggccaaaactgctacagttgcaaaatttaggaggcggttttgtag 3247421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 15029258 - 15029306
Alignment:
Q  65 gaggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  15029258 gaggggtcaaaactgctacagttggaaaacttaggggacggttttgtag 15029306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 23746093 - 23746136
Alignment:
Q  70 gccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  23746093 gccaaaactgctacagttgcaaaacttagaggacggttttgtag 23746136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 4049923 - 4049969
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||    
T  4049923 ggggccaaaactgctacagttgcaaaccttagggggcggttttgtag 4049969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 5172729 - 5172771
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  5172729 ccaaaactgctacagttgcaaaacttagggggcggttttgtag 5172771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 15348158 - 15348204
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  15348158 ggggccaaaactgctacggttgcaaaacttagggggcggttttgtag 15348204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 20185118 - 20185164
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||||    
T  20185118 ggggccaaaactgctacagttgcaaaacttaggaggcggttttgtag 20185164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 28472580 - 28472625
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  28472580 ggggccaaaactgctacagttgcaaaacttagggg-cggttttgtag 28472625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 17876359 - 17876404
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||    
T  17876359 ggggccaaaactgctacagttgcaaaacttaatggacggttttgta 17876404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 35250321 - 35250364
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttg 110  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||    
T  35250321 ggggccaaaactgctacagttgcaaaacttagggggcagttttg 35250364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 28785869 - 28785824
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||| | |||||||||||| ||||||| |||||||||||    
T  28785869 gggccaaaactacaacagttgcaaaacttagggggcggttttgtag 28785824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 40872278 - 40872233
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  40872278 gggcctaaactgctacagttacaaaacttatgggacggttttgtag 40872233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 18186550 - 18186506
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||||||||| ||||| | |||||||||||    
T  18186550 ggccaaaactgctatagttgcaaaacttaggaggcggttttgtag 18186506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 18504444 - 18504484
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    |||||||||||||||| |||||||| ||| |||||||||||    
T  18504444 ggccaaaactgctacaattgcaaaacttaagggacggtttt 18504484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 46189 - 46143
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  46189 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 46143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 2853536 - 2853494
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2853536 ccaaaactgctacagttgcaaaacttaggggacggttttgtag 2853494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 33401256 - 33401302
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  33401256 ggggccaaaactgctacagttgcaaaacttaggggacagttttgtag 33401302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 2840902 - 2840857
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  2840902 ggggccaaaactgctacaattgcaaaacttaggggacggttttgta 2840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 239040 - 238994
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  239040 ggggccaaaactgctacggttgcaaaacttaggggacgattttgtag 238994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 3579707 - 3579661
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  3579707 ggggccaaaagtgctacagttgcaaaacttagggggcggttttgtag 3579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 12766416 - 12766462
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  12766416 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 12766462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 28011327 - 28011373
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  28011327 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 28011373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 26601666 - 26601703
Alignment:
Q  72 caaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    |||||||||||||||||||||||||||||| |||||||    
T  26601666 caaaactgctacagttgcaaaatttagggggcggtttt 26601703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 1377409 - 1377455
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||| ||||||||||||| |||||| || |||||||||    
T  1377409 ggggccaaaactgttacagttgcaaaacttagggaacagttttgtag 1377455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 1385157 - 1385203
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||| ||||||||||||| |||||| || |||||||||    
T  1385157 ggggccaaaactgttacagttgcaaaacttagggaacagttttgtag 1385203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 10727303 - 10727257
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| |||| || | |||||||||    
T  10727303 ggggccaaaactgctacagttgcaaaacttagagggcagttttgtag 10727257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 10727395 - 10727441
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  10727395 ggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 10727441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 97
Target Start/End: Original strand, 11351845 - 11351875
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaattta 97  Q
    |||||||||||||||||||||||||||||||    
T  11351845 ggggccaaaactgctacagttgcaaaattta 11351875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 17248843 - 17248888
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| |||||||| || ||||||||||||||||    
T  17248843 ggggccaaaactgctacaattgcaaaactt-ggggacggttttgtag 17248888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 3812949 - 3812990
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||    
T  3812949 gggccaaaactactacaattgcaaaatttaggggacgatttt 3812990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 44436501 - 44436455
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  44436501 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 44436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 44585900 - 44585854
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  44585900 ggggcgaaaactgctacagttgcaaaatttagggggcggttttgtag 44585854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 51315607 - 51315562
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  51315607 ggggccaaaactgctacagttgcaaaacttagggggcggttttgta 51315562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 15978893 - 15978939
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  15978893 ggggccaaaactgctatagttgcaaaacttagggggcggttttgtag 15978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 25154382 - 25154428
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  25154382 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 25154428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 38958046 - 38958092
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  38958046 ggggtcaaaactgctacagttgcaaaacttagggggcggttttgtag 38958092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 46226891 - 46226937
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  46226891 ggggctaaaactgctacagttgcaaaagttatgggacggttttgtag 46226937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 54719103 - 54719061
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  54719103 ggggccaaaactgctacagttgcaaaacttagaggacggtttt 54719061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 4474271 - 4474316
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||    
T  4474271 ggggccaaaactgctacagttgcaaaacttagagggcggttttgta 4474316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 8024887 - 8024842
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  8024887 ggggccaaaactgctacagttgcaaaacgtagggggcggttttgta 8024842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 12759618 - 12759575
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  12759618 ggccaaaactgctacagttgcaaaacttagggg-cggttttgtag 12759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 3192983 - 3193026
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttg 110  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||    
T  3192983 ggggccaaaactgttacagttgcaaaacttaggggtcggttttg 3193026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 17773282 - 17773237
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||||    
T  17773282 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtag 17773237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 19074583 - 19074538
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||||    
T  19074583 ggggccaaaactgccacagttgcaaaacttagggg-cggttttgtag 19074538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 19404509 - 19404463
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||| |||||||||| |||||||||||||||||| | |||||||||    
T  19404509 ggggctaaaactgctatagttgcaaaatttagggggcagttttgtag 19404463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 25902514 - 25902480
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttagggg 101  Q
    ||||||||||||| |||||||||||||||||||||    
T  25902514 ggggccaaaactgttacagttgcaaaatttagggg 25902480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 28204586 - 28204544
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||| |||||||||||| || ||||||||    
T  28204586 ccaaaactgctacagttgtaaaatttagggggcgattttgtag 28204544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 28712663 - 28712709
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||| |||||||||||||||||||||| ||||||| || ||||||||    
T  28712663 ggggtcaaaactgctacagttgcaaaacttagggggcgattttgtag 28712709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 28944167 - 28944213
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||  |||||||||| ||| |||||||||||||||    
T  28944167 ggggccaaaactgctgaagttgcaaaacttaagggacggttttgtag 28944213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 44436599 - 44436645
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  44436599 ggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 44436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 51315685 - 51315731
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  51315685 ggggccaaaactgccacaggtgcaaaacttagggggcggttttgtag 51315731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 54464364 - 54464410
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| | |||||||||| ||||||| |||||||||||    
T  54464364 ggggccaaaactgccagagttgcaaaacttaggggccggttttgtag 54464410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 86768 - 86809
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||||||||||||||||| ||||| | ||||||||||    
T  86768 ccaaaactgctacagttgcaaaacttaggaggcggttttgta 86809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 47189708 - 47189667
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    |||||||||||||||||||||||||| ||| ||| |||||||    
T  47189708 gggccaaaactgctacagttgcaaaacttaaggggcggtttt 47189667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 3192887 - 3192839
Alignment:
Q  65 gaggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||| ||||| ||||||||| |||| ||||||| |||||||||||    
T  3192887 gaggggcctaaactactacagttgaaaaacttaggggtcggttttgtag 3192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 14992735 - 14992691
Alignment:
Q  66 aggggccaaaactgctacagttgcaaaatttaggggacggttttg 110  Q
    |||||||||||||||||||||||||||| ||| ||  ||||||||    
T  14992735 aggggccaaaactgctacagttgcaaaacttaaggtgcggttttg 14992691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 41487311 - 41487267
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  41487311 ggccaaaactgctacagttgcaaaacttagggggcggttttgtag 41487267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 30539192 - 30539238
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  30539192 ggggccaaaactgccacagatgcaaaacttaggggacggttttgtag 30539238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 41487411 - 41487457
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  41487411 ggggccaaaacagctacagttgcaaaacttagggggcggttttgtag 41487457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 17071019 - 17070975
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgt 111  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||    
T  17071019 ggggccaaaactgctacagttgcaaaacttagggaatggttttgt 17070975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 17577253 - 17577297
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgt 111  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||    
T  17577253 ggggccaaaactgctacagttgcaaaacttagggaatggttttgt 17577297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 22192502 - 22192545
Alignment:
Q  70 gccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||    
T  22192502 gccaaaacggctacagttgcaaaacttaggagacggttttgtag 22192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 29657816 - 29657770
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||  ||||||||||||||| |||||||||||    
T  29657816 ggggccaaaactgccacatatgcaaaatttagggggcggttttgtag 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 30539101 - 30539055
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||| |||| ||||||| | |||||||||    
T  30539101 ggggccaaaactgctacagttgtaaaacttagggggcagttttgtag 30539055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 37813292 - 37813338
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  37813292 ggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 37813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 20853580 - 20853625
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    |||||||||| |||||||||| ||||| ||| ||||||||||||||    
T  20853580 ggggccaaaattgctacagttacaaaacttaagggacggttttgta 20853625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 37263474 - 37263441
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggg 100  Q
    |||||||||||||||||||||| |||||||||||    
T  37263474 ggggccaaaactgctacagttgtaaaatttaggg 37263441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 14880448 - 14880412
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggac 103  Q
    |||||||||||||| |||| |||||||||||||||||    
T  14880448 ggggccaaaactgccacagatgcaaaatttaggggac 14880412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 37535862 - 37535894
Alignment:
Q  71 ccaaaactgctacagttgcaaaatttaggggac 103  Q
    |||||| ||||||||||||||||||||||||||    
T  37535862 ccaaaattgctacagttgcaaaatttaggggac 37535894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 45457197 - 45457237
Alignment:
Q  72 caaaactgctacagttgcaaaatttaggggacggttttgta 112  Q
    ||||||||| |||| |||||||||||||||||| |||||||    
T  45457197 caaaactgccacagatgcaaaatttaggggacgattttgta 45457237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 20121 - 20167
Alignment:
Q  67 ggggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  20121 ggggccaaaactactacaattgcaaaatttaggggacgattttgtag 20167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 4220 - 4261
Alignment:
Q  72 caaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  4220 caaaactgctacagttgcaaaacttagggggcggttttgtag 4261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 203300 - 203255
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||| |||||||||||||||||||| | |||||||||||    
T  203300 gggccaaaacttctacagttgcaaaatttaggaggcggttttgtag 203255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 77063 - 77108
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  77063 gggccaaaactgctacagttgtaaaacttaggggacgattttgtag 77108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 3680 - 3644
Alignment:
Q  73 aaaactgctacagttgcaaaatttaggggacggtttt 109  Q
    ||||||||||||||||| |||||||||||||||||||    
T  3680 aaaactgctacagttgcgaaatttaggggacggtttt 3644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 19150 - 19106
Alignment:
Q  69 ggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||    
T  19150 ggccaaatctgctacggttgcaaaacttaggggacggttttgtag 19106  T

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Target: scaffold0809 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 2862 - 2819
Alignment:
Q  70 gccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||||||||||||||||| |||||||||||| | |||||||||    
T  2862 gccaaaactgctacagttgtaaaatttagggggcagttttgtag 2819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 94004 - 94049
Alignment:
Q  68 gggccaaaactgctacagttgcaaaatttaggggacggttttgtag 113  Q
    ||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  94004 gggcctaaactgctacagttacaaaacttatgggacggttttgtag 94049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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