View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2205_low_15 (Length: 302)
Name: NF2205_low_15
Description: NF2205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2205_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 22382678 - 22382936
Alignment:
| Q |
13 |
aatatcatagctattagttgcgcattagttaagaaaatattttgttagatgatttacgtagctaaatcttgctagagactaaccacatattttacagagc |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
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| T |
22382678 |
aatatcatagctattagttgcgcattagttaagaaaatattgt---------------tagctaaatcttgctagagactaaccacatattttacagagc |
22382762 |
T |
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| Q |
113 |
taatcccatattttcttgtagtggctttcaaggatggtagttcgaaaagctattaagagcatgaaacaa-nnnnnnnnacaacatcaattgaattttata |
211 |
Q |
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|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
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| T |
22382763 |
taatcccatattttgttatagtggctttcaaggatggtagttcgaaaagctattaagagcacgaaacaatttttttttacaacatcaattgaattttata |
22382862 |
T |
|
| Q |
212 |
atatatataaggcttttaattttgttattattctctttgaaaagtctccaccaagctattaaaagtgttaaaaa |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22382863 |
atatatataaggcttttaattttgttattattctctttgaaaagtctccaccaagctattaaaagtgttaaaaa |
22382936 |
T |
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