View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2205_low_6 (Length: 415)

Name: NF2205_low_6
Description: NF2205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2205_low_6
NF2205_low_6
[»] chr4 (6 HSPs)
chr4 (137-294)||(45088954-45089120)
chr4 (20-137)||(45089212-45089329)
chr4 (218-298)||(44668633-44668713)
chr4 (218-298)||(44687909-44687989)
chr4 (230-277)||(45095432-45095479)
chr4 (317-358)||(45088872-45088913)
[»] chr1 (15 HSPs)
chr1 (179-295)||(44004750-44004866)
chr1 (181-281)||(43986172-43986272)
chr1 (219-286)||(19567332-19567399)
chr1 (226-281)||(43990954-43991009)
chr1 (181-293)||(23682326-23682441)
chr1 (223-280)||(43908406-43908463)
chr1 (218-279)||(43993636-43993697)
chr1 (235-279)||(43983365-43983409)
chr1 (232-279)||(43917824-43917871)
chr1 (29-75)||(19567623-19567669)
chr1 (29-78)||(23682100-23682149)
chr1 (31-80)||(43986438-43986487)
chr1 (137-180)||(23682261-23682304)
chr1 (29-78)||(43908129-43908178)
chr1 (137-185)||(19567460-19567508)
[»] chr2 (7 HSPs)
chr2 (181-294)||(24002294-24002413)
chr2 (20-71)||(24002047-24002098)
chr2 (32-74)||(20585540-20585582)
chr2 (32-74)||(20596396-20596438)
chr2 (32-74)||(20611691-20611733)
chr2 (32-74)||(20895060-20895102)
chr2 (32-74)||(20603879-20603921)
[»] chr7 (2 HSPs)
chr7 (218-281)||(41688793-41688856)
chr7 (221-258)||(41681512-41681549)
[»] chr8 (5 HSPs)
chr8 (181-294)||(24041718-24041837)
chr8 (223-281)||(42700074-42700132)
chr8 (20-71)||(24042033-24042084)
chr8 (218-281)||(42694391-42694454)
chr8 (29-74)||(42694119-42694164)
[»] chr5 (1 HSPs)
chr5 (234-281)||(8837784-8837831)


Alignment Details
Target: chr4 (Bit Score: 111; Significance: 7e-56; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 137 - 294
Target Start/End: Complemental strand, 45089120 - 45088954
Alignment:
Q  137 gagacttatggtgaagtgttgctgcctcaacatgatggtgaca---------gtgttttgagtaactgcatttgtgtgtctgttgatcaaaaaactcatt 227  Q
    ||||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45089120 gagacttatggtgaagtgttgctgcctcaacatgatggtcacaatgttttgtgtgttttgagtaactgcatttgtgtgtctgttgatcaaaaaactcatt 45089021  T
Q  228 gggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattgacaatcttccctca 294  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||| |||||||    
T  45089020 gggttgtgtggatgatgaaagagtatggagttattgagtcgtgggctaaattgataatcatccctca 45088954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 45089329 - 45089212
Alignment:
Q  20 tgaccatggtttatacttttggtgaaaattcttggacaactattcaaaatttcccgtgtgagtgggatgagcatcctgatcgggatactcttatgtggtt 119  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45089329 tgaccatggtttatacttttggtgaaaattcttagacaactattcaaaatttcccgtgtgagtgggatgagcatcctgatcgggatactcttgtgtggtt 45089230  T
Q  120 agggaaatttgtgagtgg 137  Q
    ||||||||||||||||||    
T  45089229 agggaaatttgtgagtgg 45089212  T

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Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 44668713 - 44668633
Alignment:
Q  218 aaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattgacaatcttccctcaggat 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||| ||||||    
T  44668713 aaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaactgatgatcatcccacaggat 44668633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 44687989 - 44687909
Alignment:
Q  218 aaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattgacaatcttccctcaggat 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||| ||||||    
T  44687989 aaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaactgatgatcatcccacaggat 44687909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 45095479 - 45095432
Alignment:
Q  230 gttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaa 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45095479 gttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaa 45095432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 45088913 - 45088872
Alignment:
Q  317 gatgccttgttcatttcagaaaacggtgtccttctgctgaga 358  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  45088913 gatgccttgttcatttctgaaaacggtgttcttctgctgaga 45088872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 295
Target Start/End: Complemental strand, 44004866 - 44004750
Alignment:
Q  179 agtgttttgagtaactgcatttgtgtgtctgttgatcaaaaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaat 278  Q
    |||||||||||| ||||| ||||||||  | ||||| | ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  44004866 agtgttttgagtgactgcctttgtgtgagttttgattataaaactcattggactgtgtggatgatgaaagagtatggagttgctgagtcatggactaaat 44004767  T
Q  279 tgacaatcttccctcag 295  Q
    |||  ||| ||||||||    
T  44004766 tgatgatcatccctcag 44004750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 43986272 - 43986172
Alignment:
Q  181 tgttttgagtaactgcatttgtgtgtctgttgatcaaaaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattg 280  Q
    |||||||||| ||||| ||||| ||| | ||||| |  |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43986272 tgttttgagtgactgcctttgtatgtgttttgataaggaaactcattggactgtgtggaggatgaaagagtatggagttgttgagtcatggactaaattg 43986173  T
Q  281 a 281  Q
    |    
T  43986172 a 43986172  T

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Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 19567399 - 19567332
Alignment:
Q  219 aaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattgacaatc 286  Q
    ||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  19567399 aaactcatttggctgtgtggataatgaaagagtatggagttgctgagtcatggactatattgacaatc 19567332  T

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Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 43991009 - 43990954
Alignment:
Q  226 ttgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattga 281  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||    
T  43991009 ttgggttgtgtggatgatgaaagagtatggcattattgagtcatggactaaattga 43990954  T

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Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 23682326 - 23682441
Alignment:
Q  181 tgttttgagtaactgcatttgtgtgtctgttgatca---aaaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaa 277  Q
    |||||||||||| ||| ||||||||| |  ||||||   | ||||||||| ||  |||||||| ||||||||||||||||||| |||||||||||||  |    
T  23682326 tgttttgagtaattgcctttgtgtgtgttgtgatcactcagaaactcatttggccgtgtggataatgaaagagtatggagttgctgagtcatggactgta 23682425  T
Q  278 ttgacaatcttccctc 293  Q
    ||||| ||| ||||||    
T  23682426 ttgacgatcatccctc 23682441  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 43908406 - 43908463
Alignment:
Q  223 tcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattg 280  Q
    ||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  43908406 tcattggattgtatggatgatgaaagagtatggagttgctaagtcatggactaaattg 43908463  T

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Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 43993697 - 43993636
Alignment:
Q  218 aaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaatt 279  Q
    ||||||||||||  | |||||||||||||| ||||||||||| |||||||||||||||||||    
T  43993697 aaaactcattggactatgtggatgatgaaatagtatggagtttttgagtcatggactaaatt 43993636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 43983409 - 43983365
Alignment:
Q  235 gtggatgatgaaagagtatggagttgttgagtcatggactaaatt 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  43983409 gtggttgatgaaagagtatggagttgttgagtcatggactaaatt 43983365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 43917824 - 43917871
Alignment:
Q  232 tgtgtggatgatgaaagagtatggagttgttgagtcatggactaaatt 279  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  43917824 tgtgtggatgatgaaagagtgtggagtttttgagtcatggactaaatt 43917871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 19567669 - 19567623
Alignment:
Q  29 tttatacttttggtgaaaattcttggacaactattcaaaatttcccg 75  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||    
T  19567669 tttatacctttggtgaaaattcttggacaacacttcaaaatttcccg 19567623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 23682100 - 23682149
Alignment:
Q  29 tttatacttttggtgaaaattcttggacaactattcaaaatttcccgtgt 78  Q
    |||||||||||||||||||||||||||||||  ||  |||||||||||||    
T  23682100 tttatacttttggtgaaaattcttggacaacggtttcaaatttcccgtgt 23682149  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 43986487 - 43986438
Alignment:
Q  31 tatacttttggtgaaaattcttggacaactattcaaaatttcccgtgtga 80  Q
    ||||| ||||||||||||||||| |||||| ||| |||||||||||||||    
T  43986487 tatacctttggtgaaaattcttgcacaactgttccaaatttcccgtgtga 43986438  T

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Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 23682261 - 23682304
Alignment:
Q  137 gagacttatggtgaagtgttgctgcctcaacatgatggtgacag 180  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||    
T  23682261 gagacttatggcgaagtgttgcttcctcaacatgatggtaacag 23682304  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 43908129 - 43908178
Alignment:
Q  29 tttatacttttggtgaaaattcttggacaactattcaaaatttcccgtgt 78  Q
    ||||||| ||||||||||||||||||| | || ||| |||||||||||||    
T  43908129 tttatacctttggtgaaaattcttggaaatctcttccaaatttcccgtgt 43908178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 19567508 - 19567460
Alignment:
Q  137 gagacttatggtgaagtgttgctgcctcaacatgatggtgacagtgttt 185  Q
    ||||||||||| ||| ||||||| ||||||||||||||| || ||||||    
T  19567508 gagacttatggggaactgttgcttcctcaacatgatggttaccgtgttt 19567460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 24002294 - 24002413
Alignment:
Q  181 tgttttgagtaactgcatttgtgtgtctgttgatca----aa--aaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggact 274  Q
    |||||||||||| ||||||||||||||| | |||||    ||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||     
T  24002294 tgttttgagtaattgcatttgtgtgtctttcgatcaccctaaggaaactcattgggttgtgtggatgatgaaaaagtacggagttgttgagtcatggaca 24002393  T
Q  275 aaattgacaatcttccctca 294  Q
    ||||||| |||| |||||||    
T  24002394 aaattgaaaatcatccctca 24002413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 24002047 - 24002098
Alignment:
Q  20 tgaccatggtttatacttttggtgaaaattcttggacaactattcaaaattt 71  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  24002047 tgaccataatttatacctttggtgaaaattcttggacaactgttcaaaattt 24002098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 20585582 - 20585540
Alignment:
Q  32 atacttttggtgaaaattcttggacaactattcaaaatttccc 74  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  20585582 atacttttggtgaaaattcttggacaactattccgaatttccc 20585540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 20596438 - 20596396
Alignment:
Q  32 atacttttggtgaaaattcttggacaactattcaaaatttccc 74  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  20596438 atacttttggtgaaaattcttggacaactattccgaatttccc 20596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 20611733 - 20611691
Alignment:
Q  32 atacttttggtgaaaattcttggacaactattcaaaatttccc 74  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  20611733 atacttttggtgaaaattcttggacaactattccgaatttccc 20611691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 20895060 - 20895102
Alignment:
Q  32 atacttttggtgaaaattcttggacaactattcaaaatttccc 74  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  20895060 atacttttggtgaaaattcttggacaactattccgaatttccc 20895102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 20603921 - 20603879
Alignment:
Q  32 atacttttggtgaaaattcttggacaactattcaaaatttccc 74  Q
    ||||||||||||||||||||||||||| |||||  ||||||||    
T  20603921 atacttttggtgaaaattcttggacaagtattccgaatttccc 20603879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 41688856 - 41688793
Alignment:
Q  218 aaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattga 281  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||    
T  41688856 aaaactcattgggttgcatggttgatgaaagagtatagagttgttgagtcatggactaaattga 41688793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 41681549 - 41681512
Alignment:
Q  221 actcattgggttgtgtggatgatgaaagagtatggagt 258  Q
    |||||||||||||||||| |||||||||||||||||||    
T  41681549 actcattgggttgtgtggttgatgaaagagtatggagt 41681512  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 24041837 - 24041718
Alignment:
Q  181 tgttttgagtaactgcatttgtgtgtctgttgatca----aa--aaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggact 274  Q
    |||||||| ||| ||||||||||||||| |||||||    ||  || |||||||||||||||||||||||||| || |  | |||||||||||||||||     
T  24041837 tgttttgactaattgcatttgtgtgtcttttgatcaccctaaggaagctcattgggttgtgtggatgatgaaaaagaacagcgttgttgagtcatggaca 24041738  T
Q  275 aaattgacaatcttccctca 294  Q
    ||| ||| |||| |||||||    
T  24041737 aaactgaaaatcatccctca 24041718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 42700074 - 42700132
Alignment:
Q  223 tcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattga 281  Q
    ||||||||  ||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  42700074 tcattgggccgtgtggatgatgaaacaatatggagttgctgagtcatggactaaattga 42700132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 24042084 - 24042033
Alignment:
Q  20 tgaccatggtttatacttttggtgaaaattcttggacaactattcaaaattt 71  Q
    |||||||  ||||||| |||||||||||||||||||||||  ||||||||||    
T  24042084 tgaccataatttatacctttggtgaaaattcttggacaacagttcaaaattt 24042033  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 42694391 - 42694454
Alignment:
Q  218 aaaactcattgggttgtgtggatgatgaaagagtatggagttgttgagtcatggactaaattga 281  Q
    |||| |||||||| ||| |||||||||||  | |||||||||  ||||||||||||||||||||    
T  42694391 aaaaatcattggggtgtatggatgatgaatcaatatggagttactgagtcatggactaaattga 42694454  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 42694119 - 42694164
Alignment:
Q  29 tttatacttttggtgaaaattcttggacaactattcaaaatttccc 74  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||    
T  42694119 tttatacctttggtgaaaattcttggaaaactgttccaaatttccc 42694164  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 8837831 - 8837784
Alignment:
Q  234 tgtggatgatgaaagagtatggagttgttgagtcatggactaaattga 281  Q
    |||||||||||||| ||||||||||||  ||||||||||| |||||||    
T  8837831 tgtggatgatgaaaaagtatggagttgccgagtcatggacaaaattga 8837784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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