View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2206_high_8 (Length: 367)
Name: NF2206_high_8
Description: NF2206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2206_high_8 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 26 - 348
Target Start/End: Original strand, 15083131 - 15083453
Alignment:
| Q |
26 |
cgatatcttccccgtccaacaatttattggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaa |
125 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||| |
|
|
| T |
15083131 |
cgatatcttcttcgtccaatattttattggacgaaataaagccattagccatccaaagctcaattagaaactgcttccttattattgcatctttgggaaa |
15083230 |
T |
 |
| Q |
126 |
tagtgcacagaaggcaaaacattgtctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccat |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
15083231 |
tagtgcacagaaggcaaaacattgtctcagtttaagcggcaaattcaagtaacttaatctcaacgcaggcatggcataatcttcatcttgtaaactccat |
15083330 |
T |
 |
| Q |
226 |
aatttgctttccttgacatagttccactcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttct |
325 |
Q |
| |
|
| |||||||||||| ||||||| |||||| ||||| | | |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
15083331 |
agtttgctttccttcacatagtgccactctttttcctctgttttaaagcgcaagagacttcctagtgctattgcagcaagaggcgctcccccacacttct |
15083430 |
T |
 |
| Q |
326 |
ttagtatctcctttcctatgacc |
348 |
Q |
| |
|
||| |||||||||| |||||||| |
|
|
| T |
15083431 |
ttaatatctcctttactatgacc |
15083453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 26 - 350
Target Start/End: Complemental strand, 15429523 - 15429198
Alignment:
| Q |
26 |
cgatatcttccccgtccaacaatttattggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaa |
125 |
Q |
| |
|
||||||||||| ||||||||| || |||||| ||||||||| |||||||||||||||||| |||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
15429523 |
cgatatcttcctcgtccaacatttcattggaagaaataaagtcattagccatccaaagctgaattagtaactgcttacttattctttcatctttgggaaa |
15429424 |
T |
 |
| Q |
126 |
tagtgcacagaaggcaaaacattgtctcagtttaatcggcaaattcaagtaa-cttaatctcaacgcaggcatgacattatcttcatcttgtaaactcca |
224 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||| |
|
|
| T |
15429423 |
taatgcacagaaggcaaaacattgtctcagtttaactggcaaattcaagtaaacttaatctcaatgcaggcatgacattttcttcatcttgtaaattcca |
15429324 |
T |
 |
| Q |
225 |
taatttgctttccttgacatagttccactcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttc |
324 |
Q |
| |
|
|| |||||||||||||| |||| |||||| ||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| |
|
|
| T |
15429323 |
tattttgctttccttgatatagcgccactccttttcctctcttttaaagcgcaagagacttcctagtgcttttgctgcaagaggtactcccccacatttc |
15429224 |
T |
 |
| Q |
325 |
tttagtatctcctttcctatgaccac |
350 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
15429223 |
cttagtatctcctttcctatgaccac |
15429198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 28 - 351
Target Start/End: Original strand, 15331360 - 15331683
Alignment:
| Q |
28 |
atatcttccccgtccaacaatttattggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaata |
127 |
Q |
| |
|
||||||||| ||||||||| || ||| || |||| ||||||||||||||||||||||||||||| |||| || ||||| ||||||||||| ||||| |
|
|
| T |
15331360 |
atatcttcctcgtccaacatttcattagatgaaaccaagccattagccatccaaagctcaattagaaacttcttacttattctttcatctttgataaata |
15331459 |
T |
 |
| Q |
128 |
gtgcacagaaggcaaaacattgtctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataa |
227 |
Q |
| |
|
| |||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15331460 |
gagcacagaaggcaaagcattgtctcaattttactggcaaattcaagtaacttaatctcaaggtaggcatgacataatcttcatcttgtaaactccataa |
15331559 |
T |
 |
| Q |
228 |
tttgctttccttgacatagttccactcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttcttt |
327 |
Q |
| |
|
|||||||||||||||||||| |||||||||| | | ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
15331560 |
tttgctttccttgacatagtgccactcatttacctctcttttaaaacgcaagagacttcctagtgctattgctgcaagaggtactccgccacacttcttt |
15331659 |
T |
 |
| Q |
328 |
agtatctcctttcctatgaccaca |
351 |
Q |
| |
|
|||||||| || ||||| |||||| |
|
|
| T |
15331660 |
agtatctctttccctattaccaca |
15331683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 19 - 347
Target Start/End: Original strand, 15347176 - 15347504
Alignment:
| Q |
19 |
tcattaccgatatcttccccgtccaacaatttattggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctt |
118 |
Q |
| |
|
|||||||| |||||||| | ||||||| | |||||| | |||||| ||||||||||||||||||||||||| ||||||||| |||| |||||||| | |
|
|
| T |
15347176 |
tcattaccaatatcttctgcttccaacattccattggatggaataaatccattagccatccaaagctcaattacaaactgtttgcttataatttcatcct |
15347275 |
T |
 |
| Q |
119 |
tgggaaatagtgcacagaaggcaaaacattgtctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaa |
218 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |
|
|
| T |
15347276 |
tgggaaatagtgcacaaaaggcaaaacattgtctcaattttaccggcaaattcaagtaacttaatctcaacgcaggcatgacagaattctcaccttgtaa |
15347375 |
T |
 |
| Q |
219 |
actccataatttgctttccttgacatagttccactcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactccccca |
318 |
Q |
| |
|
| |||||| || ||||||||||||||| ||| || ||||||| || |||||| ||||| | |||||| |||||| ||||||| ||||| ||||||| | |
|
|
| T |
15347376 |
attccatagcttactttccttgacatagcgccattccttttcttctcgtttaaaccgcaataaacttcccagtgcttttgctgcgagagggactccccta |
15347475 |
T |
 |
| Q |
319 |
cacttctttagtatctcctttcctatgac |
347 |
Q |
| |
|
||||| |||| |||||| || |||||||| |
|
|
| T |
15347476 |
cacttttttactatctctttccctatgac |
15347504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 40 - 343
Target Start/End: Original strand, 16396864 - 16397167
Alignment:
| Q |
40 |
tccaacaatttattggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaagg |
139 |
Q |
| |
|
||||||| || |||||| ||||| ||||| ||||| ||||||| ||||||| | ||| ||| |||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
16396864 |
tccaacatttgattggaagaaatgaagccgttagctgtccaaagatcaattaaaagctgcttgcttataatttcatctttgggaaataatgcacagaagg |
16396963 |
T |
 |
| Q |
140 |
caaaacattgtctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttcctt |
239 |
Q |
| |
|
||| ||||| || | ||| | ||||||| |||||||||||||||||| ||||||||||||| | ||||| |||||||| |||||| ||||||||||| |
|
|
| T |
16396964 |
aaaagcattgccttaattttactggcaaatgcaagtaacttaatctcaaggcaggcatgacataagcttcaccttgtaaattccatagcttgctttcctt |
16397063 |
T |
 |
| Q |
240 |
gacatagttccactcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctccttt |
339 |
Q |
| |
|
|||||| ||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
16397064 |
gacatatagccattccttttcttctcttttaaaccgcaagagacttcctagtgctattgctgcaagagggaatcccccacacttctttattatctccttc |
16397163 |
T |
 |
| Q |
340 |
ccta |
343 |
Q |
| |
|
|||| |
|
|
| T |
16397164 |
ccta |
16397167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 40 - 351
Target Start/End: Complemental strand, 15453350 - 15453039
Alignment:
| Q |
40 |
tccaacaatttattggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaagg |
139 |
Q |
| |
|
||||||| || ||| || |||||||| |||||| |||||||||||||||| | || ||| |||| ||||| |||||||||||| ||||||||||| |
|
|
| T |
15453350 |
tccaacatttgattagaagaaataaaaccattacaaatccaaagctcaattatcatcttcttgcttatagtttcacctttgggaaataatgcacagaagg |
15453251 |
T |
 |
| Q |
140 |
caaaacattgtctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttcctt |
239 |
Q |
| |
|
|||||||||||||| ||| || |||||||| ||||| ||||||||||| |||||||||||| || ||| ||||||||||||| | |||||||| ||| |
|
|
| T |
15453250 |
aaaaacattgtctcaattttattggcaaattgaagtagcttaatctcaaggcaggcatgacagaattttcgccttgtaaactccaaagtttgcttttctt |
15453151 |
T |
 |
| Q |
240 |
gacatagttccactcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctccttt |
339 |
Q |
| |
|
||||||| |||||| ||||||| ||||||||| |||||||||||||||||||| |||||||| | ||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
15453150 |
gacatagagccactctttttcttctcttttaaaacgcaagagacttcctagtgcaattgctgccaaaggaactcctccacacttatttactatctccttg |
15453051 |
T |
 |
| Q |
340 |
cctatgaccaca |
351 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15453050 |
cctatgaccaca |
15453039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 40 - 351
Target Start/End: Original strand, 16403456 - 16403767
Alignment:
| Q |
40 |
tccaacaatttattggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaagg |
139 |
Q |
| |
|
||||||| || |||||| ||||| ||||||||||| |||||||||||||| | ||| || ||| | || ||||||||||||||||||| |||||| |||| |
|
|
| T |
16403456 |
tccaacatttgattggatgaaatgaagccattagcaatccaaagctcaatcatgaagtgcttgctcataatttcatctttgggaaataatgcacaaaagg |
16403555 |
T |
 |
| Q |
140 |
caaaacattgtctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttcctt |
239 |
Q |
| |
|
|||||| ||||||| ||| | |||||||| | |||||||| | | || |||| | |||| | ||||||| ||| ||||||||||| || |||||||| |
|
|
| T |
16403556 |
aaaaacactgtctcaattttactggcaaattgaggtaacttagttttaaggcagacttgacgtaatcttcaccttctaaactccatagcttactttcctt |
16403655 |
T |
 |
| Q |
240 |
gacatagttccactcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctccttt |
339 |
Q |
| |
|
|||||| |||||| ||||||| ||||||||| ||||| |||||||||||||||||||| |||||||| |||| | ||||||| ||||||||||||||| |
|
|
| T |
16403656 |
cacatagagccactctttttcttctcttttaaaccgcaaaagacttcctagtgctattgccgcaagagggactcacacacacttttttagtatctccttt |
16403755 |
T |
 |
| Q |
340 |
cctatgaccaca |
351 |
Q |
| |
|
|||||||||||| |
|
|
| T |
16403756 |
cctatgaccaca |
16403767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 58 - 351
Target Start/End: Original strand, 15335842 - 15336135
Alignment:
| Q |
58 |
gaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaaggcaaaacattgtctcagtt |
157 |
Q |
| |
|
||||||||||||||||||||||| || || ||||| || ||||| |||||| || |||||||||||| |||||||| ||||||||||| ||||||| || |
|
|
| T |
15335842 |
gaaataaagccattagccatccagagttctattagaaagtgttttcttattagtttatctttgggaaagagtgcacacaaggcaaaacactgtctcaatt |
15335941 |
T |
 |
| Q |
158 |
taatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttccttgacatagttccactcatt |
257 |
Q |
| |
|
| | || |||||||| ||||||| |||||| ||||||||||| || ||| ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
15335942 |
ttactggtaaattcaaataacttagtctcaaggcaggcatgactgaattatcaccttgtaaactccatagcttgctttccttgacatagagccactcatt |
15336041 |
T |
 |
| Q |
258 |
ttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctcctttcctatgaccaca |
351 |
Q |
| |
|
||| | |||||| || | |||||||||||||||||||||||| ||||||||||||||| ||||||| || | |||||| || ||||| |||||| |
|
|
| T |
15336042 |
ttcgtctcttttgaaacacaagagacttcctagtgctattgccgcaagaggcactcccacacactttttaactatctcgttccctataaccaca |
15336135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 51 - 351
Target Start/End: Original strand, 15357477 - 15357777
Alignment:
| Q |
51 |
attggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaaggcaaaacattgt |
150 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| | ||||| || |||| |||| ||| |||| ||| |||||||| |||||||| || || |
|
|
| T |
15357477 |
attggatgaaataaatccattagccatccaaagctcaatcaaaaactgcttacttataatttgatccttggaaaaaagtgcacaaaaggcaaagcactgc |
15357576 |
T |
 |
| Q |
151 |
ctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttccttgacatagttcc |
250 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||| ||||| | || |||||| || ||| ||||||||||||||| |||||||||||||||||| || |
|
|
| T |
15357577 |
ctcaattttaccggcaaattcaagtaacttaacctcaaggaagacatgactgaattctcaccttgtaaactccatagattgctttccttgacatagcgcc |
15357676 |
T |
 |
| Q |
251 |
actcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctcctttcctatgaccac |
350 |
Q |
| |
|
| || ||||||| || |||||| || |||| ||||||||||||| |||| |||||||| |||||||||||||| |||| ||||||||| ||||||||||| |
|
|
| T |
15357677 |
attccttttcttctcgtttaaaacgtaagaaacttcctagtgcttttgccgcaagaggaactcccccacacttttttactatctccttccctatgaccac |
15357776 |
T |
 |
| Q |
351 |
a |
351 |
Q |
| |
|
| |
|
|
| T |
15357777 |
a |
15357777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 51 - 335
Target Start/End: Original strand, 17927798 - 17928082
Alignment:
| Q |
51 |
attggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaaggcaaaacattgt |
150 |
Q |
| |
|
|||||||||||| || ||||| |||| |||||| |||||||| | ||| || |||||| ||||||||| ||||||| ||| |||||||||| |||||| |
|
|
| T |
17927798 |
attggacgaaatgaatccattggccacccaaagttcaattagaagctgcttacttattaattcatcttttggaaatatagcagagaaggcaaagcattgt |
17927897 |
T |
 |
| Q |
151 |
ctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttccttgacatagttcc |
250 |
Q |
| |
|
|||| |||| |||||| | |||||||||||||||||| || |||||||| | ||| ||||||| ||||| || ||||| |||||||||||| ||| |
|
|
| T |
17927898 |
ctcaacttaaccggcaagtacaagtaacttaatctcaaggcctgcatgacagagttctcaccttgtaagctccacaacttgctgtccttgacatagatcc |
17927997 |
T |
 |
| Q |
251 |
actcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctc |
335 |
Q |
| |
|
| || ||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
17927998 |
attctttttcttctcttttaaagcgcaacagacttcctaatgttattgctgcaagaggcactcccctacacttctttaggatctc |
17928082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 51 - 350
Target Start/End: Original strand, 16414200 - 16414499
Alignment:
| Q |
51 |
attggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaaggcaaaacattgt |
150 |
Q |
| |
|
|||||| |||| ||| ||||| ||||||||||| ||||| | |||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16414200 |
attggatgaaagaaaaccatttgccatccaaaggtcaatcaaaaacttcttgtttattatttcatctttgggaaatagtgcacagaaggaaaaacattgt |
16414299 |
T |
 |
| Q |
151 |
ctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttccttgacatagttcc |
250 |
Q |
| |
|
|||| ||||| || ||||||||||||||||| || || ||||||||||| | ||| |||||||| ||||| |||||||||||||||| | || |
|
|
| T |
16414300 |
ctcaatttaactggtaaattcaagtaacttaaccttaaggcaggcatgacgcagttctcaccttgtaaatcccatagcttgctttccttgacattgagcc |
16414399 |
T |
 |
| Q |
251 |
actcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctcctttcctatgaccac |
350 |
Q |
| |
|
|||| |||| | |||||| || |||||||||||||||| ||| ||||| |||||||| ||||||| ||| ||||||| |||||| || ||||||||||| |
|
|
| T |
16414400 |
actctatttcctctcttttgaaacgcaagagacttcctaatgccattgcggcaagaggtactcccctacatttctttactatctctttccctatgaccac |
16414499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 30521211 - 30521164
Alignment:
| Q |
297 |
tgctgcaagaggcactcccccacacttctttagtatctcctttcctat |
344 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||| |||||||| |
|
|
| T |
30521211 |
tgctgcaagaggcaatcccccacacttctttactatctcttttcctat |
30521164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 30561551 - 30561504
Alignment:
| Q |
297 |
tgctgcaagaggcactcccccacacttctttagtatctcctttcctat |
344 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||| |||||||| |
|
|
| T |
30561551 |
tgctgcaagaggcaatcccccacacttctttactatctcttttcctat |
30561504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 17983407 - 17983465
Alignment:
| Q |
286 |
cctagtgctattgctgcaagaggcactcccccacacttctttagtatctcctttcctat |
344 |
Q |
| |
|
|||| |||| ||||||||||||||| ||| |||||||| |||| ||||||||| ||||| |
|
|
| T |
17983407 |
cctaatgcttttgctgcaagaggcaatcctccacacttttttactatctccttgcctat |
17983465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 51 - 351
Target Start/End: Original strand, 8187308 - 8187608
Alignment:
| Q |
51 |
attggacgaaataaagccattagccatccaaagctcaattaggaactgtttggttattatttcatctttgggaaatagtgcacagaaggcaaaacattgt |
150 |
Q |
| |
|
|||||| |||||||| |||||||||||||| || ||||||||||| || || |||||| ||||||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
8187308 |
attggatgaaataaaaccattagccatccatagatcaattaggaattgcttttttattaattcatcttttggaaaaagtgcacaaaaggcaaaacattgt |
8187407 |
T |
 |
| Q |
151 |
ctcagtttaatcggcaaattcaagtaacttaatctcaacgcaggcatgacattatcttcatcttgtaaactccataatttgctttccttgacatagttcc |
250 |
Q |
| |
|
|||| ||| || |||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||| || |
|
|
| T |
8187408 |
ctcaattttattggcaaattcaagtaacttaatctcaaggcaggcatgactgtattctcaccttgtaaactccatagattactttccaagacatagagcc |
8187507 |
T |
 |
| Q |
251 |
actcattttcttgtcttttaaagcgcaagagacttcctagtgctattgctgcaagaggcactcccccacacttctttagtatctcctttcctatgaccac |
350 |
Q |
| |
|
|||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||||| ||||||||||| |
|
|
| T |
8187508 |
actccttttcctctcttttaaaacgcaagagacttcctagtgctattgctgcaagaggtacacccccacacttttttgctatctccttccctatgaccac |
8187607 |
T |
 |
| Q |
351 |
a |
351 |
Q |
| |
|
| |
|
|
| T |
8187608 |
a |
8187608 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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