View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2206_low_15 (Length: 253)
Name: NF2206_low_15
Description: NF2206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2206_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 38688491 - 38688268
Alignment:
| Q |
18 |
acatgtgcgggaggagccaccgcacagggcctaaaattttagaannnnnnnnatttttctatttcttcttatagatgttcttgatgataaaattctattt |
117 |
Q |
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| T |
38688491 |
acatgtgcgggaggagccaccgcacagggcgtaaaattttaga---ccccccatttttctatttcttcttatagatgttcttgatgataaaattctattt |
38688395 |
T |
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| Q |
118 |
gaggaattgaatgtaagccaagagttttaacaattgaataagttttatgatattgagttctcttaatacattttagtatttgctataatgcatgcatatc |
217 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
38688394 |
gaggaattgaatgtaagccaggagttttaacaattgaataagttttatgatattgagttctcttaatacattttattatttgctataatgcatgcatatc |
38688295 |
T |
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| Q |
218 |
ttatagaat-aatatcaactacctttg |
243 |
Q |
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||||||||| ||||||||||| ||||| |
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| T |
38688294 |
ttatagaataaatatcaactatctttg |
38688268 |
T |
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