View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2206_low_17 (Length: 252)
Name: NF2206_low_17
Description: NF2206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2206_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 37769527 - 37769289
Alignment:
| Q |
1 |
aggaaaatttgacatgaacagatgtttcaggtttcttccaatctcagctacctcccaattgggaagaatagataacaacacacgaaacttgtgcccttcc |
100 |
Q |
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| T |
37769527 |
aggaaaatttgacatgaacagatgtttcaggtttcttccaatatcagctacctcccaattgggaagaatagataacaacacacgaaacttgtgcccttcc |
37769428 |
T |
|
| Q |
101 |
acttgtgctaaagaaatttttattcttaggagcaccccttttaactatctttatgatttggttgcgatcgcaattgca-----gctgcgaataaaaggtt |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
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| T |
37769427 |
acttgtgctaaagaaatttttattcttaggagcaccccttttaactatctttatgatttggttgtgatcgcaattgcagctacgctgcgaataaaaggtt |
37769328 |
T |
|
| Q |
196 |
aggtgagttgggtcccagggttcaccatagccaagcctc |
234 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
37769327 |
aggtgagttgggtcccagggttcaccatagccaagcctc |
37769289 |
T |
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